Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574460 | AET05326.2 | 83.621 | 232 | 24 | 2 | 834 | 1051 | 1023 | 1254 | 5.51e-98 | 348 |
| Msa0574460 | AET05326.2 | 92.285 | 1024 | 26 | 5 | 1 | 971 | 1 | 1024 | 0.0 | 1805 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574460 | sp|Q5JKW1|KN14C_ORYSJ | 49.234 | 849 | 364 | 14 | 40 | 843 | 14 | 840 | 0.0 | 753 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574460 | G7L9P3 | 83.621 | 232 | 24 | 2 | 834 | 1051 | 1023 | 1254 | 2.63e-98 | 348 |
| Msa0574460 | G7L9P3 | 92.285 | 1024 | 26 | 5 | 1 | 971 | 1 | 1024 | 0.0 | 1805 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0141100 | Msa0574460 | 0.806858 | 6.707075e-50 | -8.615850e-47 |
| Msa0374850 | Msa0574460 | 0.801009 | 1.101900e-48 | -8.615850e-47 |
| Msa0470860 | Msa0574460 | 0.803252 | 3.809009e-49 | -8.615850e-47 |
| Msa0531430 | Msa0574460 | 0.818556 | 1.843155e-52 | -8.615850e-47 |
| Msa0574460 | Msa0585270 | 0.903714 | 2.607294e-79 | -8.615850e-47 |
| Msa0574460 | Msa0708130 | 0.913947 | 3.405044e-84 | -8.615850e-47 |
| Msa0574460 | Msa0837980 | 0.802709 | 4.933586e-49 | -8.615850e-47 |
| Msa0574460 | Msa1037700 | -0.801072 | 1.069681e-48 | -8.615850e-47 |
| Msa0574460 | Msa1144390 | 0.804365 | 2.237517e-49 | -8.615850e-47 |
| Msa0574460 | Msa1298260 | 0.809423 | 1.906226e-50 | -8.615850e-47 |
| Msa0574460 | Msa1397250 | 0.800737 | 1.252738e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574460 | MtrunA17_Chr8g0390981 | 93.333 | 660 | 11 | 2 | 1 | 627 | 1 | 660 | 0.0 | 1257 |
| Msa0574460 | MtrunA17_Chr8g0390991 | 88.988 | 336 | 17 | 3 | 656 | 971 | 1 | 336 | 0.0 | 561 |
| Msa0574460 | MtrunA17_Chr8g0390991 | 83.621 | 232 | 24 | 2 | 834 | 1051 | 335 | 566 | 1.79e-108 | 349 |
| Msa0574460 | MtrunA17_Chr7g0271961 | 37.695 | 833 | 339 | 23 | 58 | 841 | 61 | 762 | 3.45e-137 | 439 |
| Msa0574460 | MtrunA17_Chr3g0102921 | 47.665 | 514 | 216 | 7 | 435 | 900 | 368 | 876 | 8.70e-136 | 438 |
| Msa0574460 | MtrunA17_Chr8g0386901 | 39.843 | 635 | 326 | 9 | 34 | 627 | 10 | 629 | 2.78e-134 | 421 |
| Msa0574460 | MtrunA17_Chr1g0195111 | 50.334 | 449 | 183 | 7 | 443 | 859 | 334 | 774 | 2.03e-130 | 421 |
| Msa0574460 | MtrunA17_Chr1g0195111 | 25.441 | 397 | 217 | 14 | 49 | 416 | 46 | 392 | 2.82e-15 | 80.9 |
| Msa0574460 | MtrunA17_Chr1g0192481 | 50.237 | 422 | 176 | 5 | 464 | 852 | 17 | 437 | 5.15e-130 | 407 |
| Msa0574460 | MtrunA17_Chr5g0447041 | 45.298 | 521 | 208 | 7 | 435 | 883 | 364 | 879 | 2.22e-128 | 419 |
| Msa0574460 | MtrunA17_Chr6g0484511 | 57.927 | 328 | 105 | 2 | 339 | 633 | 123 | 450 | 1.04e-123 | 387 |
| Msa0574460 | MtrunA17_Chr7g0257301 | 46.053 | 456 | 188 | 9 | 435 | 834 | 322 | 775 | 5.80e-114 | 378 |
| Msa0574460 | MtrunA17_Chr7g0257301 | 34.459 | 148 | 73 | 4 | 37 | 166 | 23 | 164 | 1.10e-12 | 72.8 |
| Msa0574460 | MtrunA17_Chr6g0484501 | 77.093 | 227 | 43 | 2 | 626 | 843 | 1 | 227 | 4.06e-103 | 323 |
| Msa0574460 | MtrunA17_Chr8g0386891 | 51.289 | 349 | 125 | 11 | 656 | 983 | 1 | 325 | 3.24e-87 | 287 |
| Msa0574460 | MtrunA17_Chr7g0269681 | 57.031 | 256 | 89 | 8 | 626 | 869 | 11 | 257 | 1.18e-74 | 254 |
| Msa0574460 | MtrunA17_Chr5g0411971 | 40.609 | 394 | 182 | 9 | 465 | 819 | 355 | 735 | 3.59e-71 | 257 |
| Msa0574460 | MtrunA17_Chr5g0421521 | 40.609 | 394 | 182 | 9 | 465 | 819 | 330 | 710 | 5.95e-70 | 252 |
| Msa0574460 | MtrunA17_Chr5g0421591 | 40.102 | 394 | 184 | 9 | 465 | 819 | 330 | 710 | 1.88e-69 | 250 |
| Msa0574460 | MtrunA17_Chr6g0484521 | 75.163 | 153 | 37 | 1 | 184 | 336 | 30 | 181 | 3.07e-69 | 229 |
| Msa0574460 | MtrunA17_Chr2g0312631 | 32.509 | 566 | 304 | 15 | 364 | 875 | 227 | 768 | 9.07e-69 | 250 |
| Msa0574460 | MtrunA17_Chr1g0191851 | 40.166 | 361 | 182 | 7 | 490 | 821 | 132 | 487 | 6.08e-68 | 243 |
| Msa0574460 | MtrunA17_Chr7g0272871 | 40.489 | 368 | 181 | 6 | 485 | 821 | 107 | 467 | 1.95e-67 | 241 |
| Msa0574460 | MtrunA17_Chr2g0280421 | 34.167 | 480 | 232 | 15 | 404 | 811 | 305 | 772 | 5.73e-59 | 217 |
| Msa0574460 | MtrunA17_Chr4g0042061 | 37.736 | 371 | 179 | 8 | 493 | 817 | 420 | 784 | 1.05e-56 | 211 |
| Msa0574460 | MtrunA17_Chr2g0319271 | 36.247 | 389 | 187 | 10 | 481 | 817 | 373 | 752 | 1.76e-56 | 209 |
| Msa0574460 | MtrunA17_Chr4g0049011 | 36.856 | 369 | 192 | 7 | 481 | 808 | 253 | 621 | 2.31e-56 | 207 |
| Msa0574460 | MtrunA17_Chr5g0407791 | 31.423 | 541 | 281 | 17 | 343 | 841 | 758 | 1250 | 1.02e-49 | 192 |
| Msa0574460 | MtrunA17_Chr8g0369881 | 31.299 | 508 | 272 | 14 | 368 | 827 | 742 | 1220 | 3.51e-48 | 187 |
| Msa0574460 | MtrunA17_Chr7g0269691 | 39.640 | 222 | 110 | 2 | 433 | 631 | 328 | 548 | 1.41e-43 | 167 |
| Msa0574460 | MtrunA17_Chr8g0367581 | 32.552 | 384 | 212 | 14 | 488 | 841 | 129 | 495 | 8.40e-41 | 164 |
| Msa0574460 | MtrunA17_Chr1g0178411 | 32.564 | 390 | 195 | 11 | 505 | 841 | 13 | 387 | 4.55e-39 | 157 |
| Msa0574460 | MtrunA17_Chr7g0266631 | 32.225 | 391 | 197 | 11 | 505 | 842 | 9 | 384 | 1.12e-38 | 156 |
| Msa0574460 | MtrunA17_Chr1g0191181 | 32.857 | 350 | 188 | 9 | 493 | 806 | 76 | 414 | 2.44e-38 | 152 |
| Msa0574460 | MtrunA17_Chr4g0045381 | 38.645 | 251 | 133 | 4 | 603 | 841 | 321 | 562 | 1.16e-35 | 147 |
| Msa0574460 | MtrunA17_Chr2g0327581 | 31.234 | 397 | 213 | 14 | 492 | 841 | 35 | 418 | 9.93e-35 | 144 |
| Msa0574460 | MtrunA17_Chr2g0322291 | 38.686 | 274 | 142 | 7 | 587 | 843 | 195 | 459 | 1.61e-34 | 143 |
| Msa0574460 | MtrunA17_Chr4g0069141 | 38.247 | 251 | 131 | 6 | 580 | 812 | 253 | 497 | 5.57e-34 | 142 |
| Msa0574460 | MtrunA17_Chr1g0182151 | 31.088 | 386 | 202 | 12 | 505 | 841 | 54 | 424 | 1.65e-33 | 140 |
| Msa0574460 | MtrunA17_Chr3g0122121 | 31.008 | 387 | 199 | 13 | 506 | 841 | 99 | 468 | 1.77e-33 | 140 |
| Msa0574460 | MtrunA17_Chr4g0053211 | 27.984 | 486 | 236 | 18 | 506 | 902 | 13 | 473 | 3.05e-33 | 139 |
| Msa0574460 | MtrunA17_Chr8g0377731 | 31.566 | 396 | 198 | 14 | 506 | 849 | 56 | 430 | 3.95e-33 | 139 |
| Msa0574460 | MtrunA17_Chr4g0062291 | 29.412 | 408 | 234 | 9 | 479 | 841 | 92 | 490 | 7.65e-33 | 136 |
| Msa0574460 | MtrunA17_Chr3g0132921 | 29.398 | 432 | 223 | 18 | 506 | 868 | 10 | 428 | 1.07e-32 | 134 |
| Msa0574460 | MtrunA17_Chr2g0307481 | 32.055 | 365 | 200 | 11 | 488 | 815 | 53 | 406 | 4.15e-32 | 134 |
| Msa0574460 | MtrunA17_Chr5g0398521 | 28.412 | 359 | 188 | 11 | 504 | 806 | 56 | 401 | 2.59e-31 | 132 |
| Msa0574460 | MtrunA17_Chr1g0193221 | 30.326 | 399 | 197 | 13 | 506 | 840 | 4 | 385 | 2.92e-31 | 133 |
| Msa0574460 | MtrunA17_Chr6g0483701 | 30.655 | 336 | 197 | 8 | 506 | 812 | 31 | 359 | 3.58e-30 | 129 |
| Msa0574460 | MtrunA17_Chr1g0152231 | 35.836 | 293 | 149 | 11 | 579 | 850 | 96 | 370 | 3.70e-30 | 128 |
| Msa0574460 | MtrunA17_Chr3g0134191 | 27.169 | 438 | 231 | 14 | 506 | 872 | 9 | 429 | 5.96e-30 | 128 |
| Msa0574460 | MtrunA17_Chr4g0035661 | 30.376 | 372 | 201 | 13 | 503 | 841 | 87 | 433 | 8.67e-30 | 128 |
| Msa0574460 | MtrunA17_Chr3g0145071 | 30.894 | 369 | 197 | 13 | 506 | 841 | 100 | 443 | 1.50e-29 | 127 |
| Msa0574460 | MtrunA17_Chr4g0070001 | 29.602 | 402 | 221 | 17 | 506 | 861 | 144 | 529 | 1.97e-29 | 127 |
| Msa0574460 | MtrunA17_Chr1g0153061 | 27.778 | 414 | 217 | 14 | 506 | 855 | 9 | 404 | 1.40e-28 | 124 |
| Msa0574460 | MtrunA17_Chr5g0427481 | 37.443 | 219 | 117 | 5 | 608 | 806 | 140 | 358 | 2.74e-28 | 123 |
| Msa0574460 | MtrunA17_Chr7g0245931 | 28.134 | 359 | 188 | 12 | 504 | 806 | 51 | 395 | 2.84e-28 | 122 |
| Msa0574460 | MtrunA17_Chr7g0258991 | 30.562 | 409 | 220 | 16 | 500 | 869 | 68 | 451 | 7.26e-28 | 122 |
| Msa0574460 | MtrunA17_Chr3g0142261 | 28.841 | 371 | 219 | 12 | 506 | 843 | 20 | 378 | 2.50e-26 | 117 |
| Msa0574460 | MtrunA17_Chr5g0405181 | 30.000 | 340 | 196 | 11 | 506 | 812 | 21 | 351 | 2.59e-26 | 116 |
| Msa0574460 | MtrunA17_Chr8g0372171 | 30.742 | 283 | 169 | 7 | 572 | 842 | 104 | 371 | 1.05e-23 | 108 |
| Msa0574460 | MtrunA17_Chr4g0036001 | 29.155 | 343 | 200 | 12 | 489 | 799 | 9 | 340 | 4.42e-23 | 106 |
| Msa0574460 | MtrunA17_Chr2g0295881 | 29.275 | 345 | 190 | 13 | 506 | 805 | 198 | 533 | 2.43e-21 | 100 |
| Msa0574460 | MtrunA17_Chr6g0485471 | 27.273 | 374 | 225 | 12 | 489 | 831 | 103 | 460 | 3.65e-21 | 99.8 |
| Msa0574460 | MtrunA17_Chr4g0067421 | 28.333 | 360 | 206 | 12 | 489 | 805 | 189 | 539 | 3.92e-21 | 99.8 |
| Msa0574460 | MtrunA17_Chr7g0238581 | 38.961 | 154 | 85 | 3 | 655 | 801 | 196 | 347 | 8.19e-21 | 98.2 |
| Msa0574460 | MtrunA17_Chr2g0331761 | 26.685 | 356 | 218 | 10 | 506 | 830 | 186 | 529 | 1.49e-20 | 97.8 |
| Msa0574460 | MtrunA17_Chr5g0445211 | 27.692 | 390 | 207 | 15 | 506 | 842 | 75 | 442 | 9.36e-20 | 95.9 |
| Msa0574460 | MtrunA17_Chr3g0101021 | 25.615 | 488 | 264 | 18 | 505 | 933 | 75 | 522 | 1.79e-19 | 94.7 |
| Msa0574460 | MtrunA17_Chr1g0192491 | 31.250 | 240 | 115 | 8 | 67 | 293 | 72 | 274 | 2.80e-15 | 77.8 |
| Msa0574460 | MtrunA17_Chr1g0187411 | 27.397 | 292 | 174 | 8 | 577 | 832 | 211 | 500 | 9.80e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574460 | AT1G63640.1 | 40.839 | 1097 | 486 | 22 | 42 | 1048 | 42 | 1065 | 0.0 | 710 |
| Msa0574460 | AT1G63640.5 | 40.839 | 1097 | 486 | 22 | 42 | 1048 | 32 | 1055 | 0.0 | 710 |
| Msa0574460 | AT1G63640.3 | 40.801 | 1098 | 486 | 22 | 42 | 1048 | 42 | 1066 | 0.0 | 710 |
| Msa0574460 | AT1G63640.4 | 40.839 | 1097 | 486 | 22 | 42 | 1048 | 42 | 1065 | 0.0 | 710 |
| Msa0574460 | AT1G63640.2 | 40.619 | 1098 | 481 | 22 | 42 | 1048 | 42 | 1059 | 0.0 | 707 |
| Msa0574460 | AT5G41310.1 | 41.320 | 985 | 396 | 27 | 42 | 989 | 43 | 882 | 0.0 | 620 |
| Msa0574460 | AT1G73860.2 | 54.376 | 537 | 207 | 7 | 342 | 841 | 259 | 794 | 0.0 | 556 |
| Msa0574460 | AT1G73860.2 | 58.768 | 211 | 71 | 4 | 210 | 407 | 1 | 208 | 1.58e-62 | 231 |
| Msa0574460 | AT1G18410.3 | 51.050 | 619 | 230 | 14 | 287 | 843 | 251 | 858 | 0.0 | 556 |
| Msa0574460 | AT1G18410.3 | 53.333 | 240 | 100 | 2 | 188 | 416 | 36 | 274 | 3.85e-61 | 227 |
| Msa0574460 | AT1G18410.2 | 51.050 | 619 | 230 | 14 | 287 | 843 | 251 | 858 | 0.0 | 556 |
| Msa0574460 | AT1G18410.2 | 53.333 | 240 | 100 | 2 | 188 | 416 | 36 | 274 | 3.85e-61 | 227 |
| Msa0574460 | AT1G73860.1 | 54.376 | 537 | 207 | 7 | 342 | 841 | 342 | 877 | 0.0 | 556 |
| Msa0574460 | AT1G73860.1 | 51.673 | 269 | 109 | 6 | 153 | 407 | 30 | 291 | 2.50e-66 | 243 |
| Msa0574460 | AT1G18410.4 | 51.050 | 619 | 230 | 14 | 287 | 843 | 394 | 1001 | 4.92e-179 | 553 |
| Msa0574460 | AT1G18410.4 | 55.217 | 230 | 101 | 2 | 188 | 416 | 189 | 417 | 6.07e-61 | 228 |
| Msa0574460 | AT1G18410.1 | 50.565 | 619 | 225 | 14 | 287 | 843 | 394 | 993 | 2.19e-177 | 549 |
| Msa0574460 | AT1G18410.1 | 55.217 | 230 | 101 | 2 | 188 | 416 | 189 | 417 | 5.34e-61 | 228 |
| Msa0574460 | AT1G18410.5 | 50.242 | 619 | 222 | 15 | 287 | 843 | 241 | 835 | 1.87e-176 | 542 |
| Msa0574460 | AT1G18410.5 | 55.217 | 230 | 101 | 2 | 188 | 416 | 36 | 264 | 8.03e-62 | 229 |
| Msa0574460 | AT1G09170.4 | 36.451 | 834 | 380 | 21 | 48 | 834 | 62 | 792 | 1.55e-142 | 449 |
| Msa0574460 | AT1G09170.2 | 36.451 | 834 | 380 | 21 | 48 | 834 | 62 | 792 | 2.01e-141 | 447 |
| Msa0574460 | AT1G09170.3 | 36.695 | 823 | 371 | 21 | 48 | 823 | 62 | 781 | 3.20e-140 | 442 |
| Msa0574460 | AT1G09170.7 | 36.695 | 823 | 371 | 21 | 48 | 823 | 62 | 781 | 3.20e-140 | 442 |
| Msa0574460 | AT1G09170.5 | 36.811 | 834 | 377 | 21 | 48 | 834 | 62 | 792 | 7.99e-140 | 447 |
| Msa0574460 | AT5G27000.1 | 47.750 | 511 | 218 | 9 | 361 | 833 | 253 | 752 | 8.99e-130 | 419 |
| Msa0574460 | AT5G27000.1 | 26.923 | 364 | 189 | 13 | 31 | 372 | 35 | 343 | 1.45e-18 | 92.0 |
| Msa0574460 | AT3G44730.1 | 49.660 | 441 | 187 | 5 | 435 | 842 | 307 | 745 | 1.98e-129 | 421 |
| Msa0574460 | AT3G44730.4 | 49.660 | 441 | 187 | 5 | 435 | 842 | 307 | 745 | 1.98e-129 | 421 |
| Msa0574460 | AT3G44730.2 | 49.660 | 441 | 187 | 5 | 435 | 842 | 352 | 790 | 3.10e-129 | 421 |
| Msa0574460 | AT3G44730.3 | 49.660 | 441 | 187 | 5 | 435 | 842 | 352 | 790 | 3.10e-129 | 421 |
| Msa0574460 | AT1G09170.1 | 34.850 | 835 | 358 | 20 | 47 | 834 | 61 | 756 | 3.54e-125 | 407 |
| Msa0574460 | AT2G47500.2 | 47.588 | 456 | 201 | 8 | 415 | 836 | 307 | 758 | 7.46e-123 | 399 |
| Msa0574460 | AT2G47500.2 | 32.759 | 174 | 99 | 6 | 23 | 179 | 28 | 200 | 3.63e-13 | 74.7 |
| Msa0574460 | AT2G47500.1 | 47.588 | 456 | 201 | 8 | 415 | 836 | 307 | 758 | 1.34e-122 | 399 |
| Msa0574460 | AT2G47500.1 | 32.759 | 174 | 99 | 6 | 23 | 179 | 28 | 200 | 3.55e-13 | 74.7 |
| Msa0574460 | AT3G10310.1 | 47.403 | 462 | 197 | 10 | 404 | 830 | 267 | 717 | 5.20e-118 | 387 |
| Msa0574460 | AT3G10310.1 | 41.964 | 112 | 51 | 3 | 47 | 144 | 26 | 137 | 1.28e-15 | 82.4 |
| Msa0574460 | AT1G09170.6 | 34.805 | 770 | 355 | 20 | 48 | 773 | 62 | 728 | 6.02e-118 | 380 |
| Msa0574460 | AT1G09170.8 | 34.805 | 770 | 355 | 20 | 48 | 773 | 62 | 728 | 6.02e-118 | 380 |
| Msa0574460 | AT3G10310.2 | 47.403 | 462 | 197 | 10 | 404 | 830 | 267 | 717 | 7.31e-118 | 386 |
| Msa0574460 | AT3G10310.2 | 41.964 | 112 | 51 | 3 | 47 | 144 | 26 | 137 | 1.32e-15 | 82.4 |
| Msa0574460 | AT1G72250.2 | 36.803 | 538 | 266 | 15 | 379 | 856 | 354 | 877 | 6.37e-77 | 276 |
| Msa0574460 | AT1G72250.3 | 36.803 | 538 | 266 | 15 | 379 | 856 | 366 | 889 | 7.39e-77 | 276 |
| Msa0574460 | AT1G72250.4 | 36.803 | 538 | 266 | 15 | 379 | 856 | 365 | 888 | 8.44e-77 | 276 |
| Msa0574460 | AT1G72250.1 | 34.964 | 552 | 279 | 12 | 371 | 856 | 331 | 868 | 4.62e-76 | 273 |
| Msa0574460 | AT2G22610.2 | 41.439 | 403 | 195 | 9 | 483 | 852 | 395 | 789 | 3.92e-73 | 263 |
| Msa0574460 | AT2G22610.1 | 41.439 | 403 | 195 | 9 | 483 | 852 | 395 | 789 | 3.93e-73 | 264 |
| Msa0574460 | AT2G22610.3 | 41.439 | 403 | 195 | 9 | 483 | 852 | 396 | 790 | 4.15e-73 | 263 |
| Msa0574460 | AT5G27550.2 | 38.393 | 448 | 236 | 9 | 409 | 821 | 30 | 472 | 3.63e-71 | 253 |
| Msa0574460 | AT5G27550.1 | 38.393 | 448 | 236 | 9 | 409 | 821 | 30 | 472 | 3.63e-71 | 253 |
| Msa0574460 | AT5G54670.3 | 32.292 | 576 | 315 | 15 | 291 | 811 | 124 | 679 | 4.73e-64 | 231 |
| Msa0574460 | AT5G54670.1 | 32.292 | 576 | 315 | 15 | 291 | 811 | 184 | 739 | 6.59e-64 | 231 |
| Msa0574460 | AT5G54670.2 | 32.292 | 576 | 315 | 15 | 291 | 811 | 184 | 739 | 6.59e-64 | 231 |
| Msa0574460 | AT4G27180.1 | 39.946 | 373 | 169 | 10 | 493 | 819 | 375 | 738 | 6.31e-63 | 229 |
| Msa0574460 | AT4G27180.2 | 39.946 | 373 | 169 | 10 | 493 | 819 | 375 | 738 | 6.31e-63 | 229 |
| Msa0574460 | AT4G21270.1 | 38.667 | 375 | 175 | 9 | 493 | 819 | 419 | 786 | 4.63e-61 | 224 |
| Msa0574460 | AT4G05190.2 | 39.237 | 367 | 168 | 9 | 493 | 811 | 403 | 762 | 6.57e-61 | 223 |
| Msa0574460 | AT4G05190.1 | 39.237 | 367 | 168 | 9 | 493 | 811 | 416 | 775 | 1.15e-60 | 223 |
| Msa0574460 | AT5G65930.3 | 30.271 | 479 | 278 | 13 | 390 | 836 | 794 | 1248 | 5.49e-44 | 174 |
| Msa0574460 | AT5G65930.1 | 30.625 | 480 | 275 | 14 | 390 | 836 | 787 | 1241 | 5.68e-44 | 174 |
| Msa0574460 | AT5G65930.2 | 30.625 | 480 | 275 | 14 | 390 | 836 | 788 | 1242 | 5.84e-44 | 174 |
| Msa0574460 | AT1G55550.1 | 28.788 | 462 | 260 | 14 | 455 | 882 | 61 | 487 | 3.45e-43 | 170 |
| Msa0574460 | AT5G65460.2 | 30.488 | 410 | 217 | 15 | 488 | 858 | 121 | 501 | 5.29e-41 | 164 |
| Msa0574460 | AT5G65460.6 | 30.488 | 410 | 217 | 15 | 488 | 858 | 121 | 501 | 6.83e-41 | 164 |
| Msa0574460 | AT5G65460.4 | 30.488 | 410 | 217 | 15 | 488 | 858 | 121 | 501 | 6.96e-41 | 164 |
| Msa0574460 | AT5G65460.1 | 30.488 | 410 | 217 | 15 | 488 | 858 | 121 | 501 | 8.03e-41 | 164 |
| Msa0574460 | AT5G27950.1 | 33.333 | 351 | 185 | 12 | 493 | 806 | 67 | 405 | 5.02e-40 | 158 |
| Msa0574460 | AT5G65460.3 | 29.976 | 417 | 217 | 15 | 488 | 858 | 121 | 508 | 5.17e-40 | 161 |
| Msa0574460 | AT2G36200.1 | 32.143 | 392 | 196 | 12 | 505 | 842 | 12 | 387 | 5.59e-39 | 157 |
| Msa0574460 | AT5G10470.1 | 29.529 | 403 | 224 | 12 | 488 | 855 | 125 | 502 | 9.17e-39 | 157 |
| Msa0574460 | AT5G10470.2 | 29.529 | 403 | 224 | 12 | 488 | 855 | 125 | 502 | 1.00e-38 | 157 |
| Msa0574460 | AT2G36200.2 | 32.143 | 392 | 196 | 12 | 505 | 842 | 12 | 387 | 1.02e-38 | 157 |
| Msa0574460 | AT3G45850.2 | 32.558 | 387 | 194 | 14 | 505 | 841 | 55 | 424 | 4.41e-38 | 155 |
| Msa0574460 | AT3G45850.1 | 32.558 | 387 | 194 | 14 | 505 | 841 | 55 | 424 | 4.41e-38 | 155 |
| Msa0574460 | AT2G28620.1 | 32.461 | 382 | 201 | 14 | 505 | 841 | 50 | 419 | 6.77e-38 | 154 |
| Msa0574460 | AT2G28620.3 | 32.461 | 382 | 201 | 14 | 505 | 841 | 50 | 419 | 7.38e-38 | 154 |
| Msa0574460 | AT2G28620.2 | 32.461 | 382 | 201 | 14 | 505 | 841 | 50 | 419 | 7.38e-38 | 154 |
| Msa0574460 | AT3G63480.2 | 36.226 | 265 | 152 | 6 | 553 | 806 | 77 | 335 | 2.57e-35 | 141 |
| Msa0574460 | AT3G44050.1 | 41.667 | 240 | 119 | 5 | 616 | 843 | 234 | 464 | 3.47e-35 | 146 |
| Msa0574460 | AT3G17360.3 | 39.051 | 274 | 135 | 7 | 580 | 826 | 268 | 536 | 1.03e-34 | 145 |
| Msa0574460 | AT3G17360.1 | 39.051 | 274 | 135 | 7 | 580 | 826 | 268 | 536 | 1.08e-34 | 145 |
| Msa0574460 | AT3G17360.2 | 39.051 | 274 | 135 | 7 | 580 | 826 | 268 | 536 | 1.14e-34 | 145 |
| Msa0574460 | AT3G63480.1 | 36.803 | 269 | 149 | 8 | 553 | 806 | 77 | 339 | 2.44e-34 | 138 |
| Msa0574460 | AT2G37420.1 | 32.461 | 382 | 201 | 11 | 505 | 841 | 48 | 417 | 3.52e-34 | 142 |
| Msa0574460 | AT2G37420.2 | 32.461 | 382 | 201 | 11 | 505 | 841 | 48 | 417 | 3.52e-34 | 142 |
| Msa0574460 | AT4G14150.1 | 31.105 | 389 | 195 | 15 | 506 | 842 | 92 | 459 | 3.59e-34 | 143 |
| Msa0574460 | AT3G23670.1 | 31.606 | 386 | 195 | 15 | 506 | 841 | 97 | 463 | 5.79e-34 | 142 |
| Msa0574460 | AT3G23670.2 | 31.606 | 386 | 195 | 15 | 506 | 841 | 97 | 463 | 7.81e-34 | 141 |
| Msa0574460 | AT3G19050.1 | 39.394 | 231 | 123 | 3 | 603 | 821 | 321 | 546 | 1.26e-33 | 141 |
| Msa0574460 | AT4G39050.1 | 34.056 | 323 | 165 | 11 | 549 | 841 | 138 | 442 | 3.58e-32 | 136 |
| Msa0574460 | AT1G18370.1 | 29.891 | 368 | 209 | 10 | 506 | 842 | 32 | 381 | 1.23e-31 | 134 |
| Msa0574460 | AT1G59540.1 | 31.638 | 354 | 172 | 12 | 549 | 842 | 43 | 386 | 3.18e-31 | 132 |
| Msa0574460 | AT2G21380.2 | 32.923 | 325 | 166 | 12 | 549 | 841 | 144 | 448 | 6.96e-31 | 132 |
| Msa0574460 | AT2G21380.1 | 32.923 | 325 | 166 | 12 | 549 | 841 | 144 | 448 | 6.96e-31 | 132 |
| Msa0574460 | AT5G60930.3 | 30.728 | 371 | 183 | 15 | 506 | 812 | 7 | 367 | 7.46e-31 | 132 |
| Msa0574460 | AT5G60930.1 | 30.728 | 371 | 183 | 15 | 506 | 812 | 7 | 367 | 7.83e-31 | 132 |
| Msa0574460 | AT5G60930.2 | 30.728 | 371 | 183 | 15 | 506 | 812 | 7 | 367 | 8.88e-31 | 132 |
| Msa0574460 | AT1G01950.2 | 29.167 | 360 | 183 | 12 | 504 | 806 | 59 | 403 | 9.48e-31 | 131 |
| Msa0574460 | AT1G01950.1 | 29.167 | 360 | 183 | 12 | 504 | 806 | 59 | 403 | 9.98e-31 | 131 |
| Msa0574460 | AT1G01950.3 | 28.691 | 359 | 186 | 11 | 504 | 806 | 59 | 403 | 1.08e-30 | 131 |
| Msa0574460 | AT3G49650.1 | 29.855 | 345 | 197 | 9 | 506 | 812 | 15 | 352 | 1.12e-30 | 130 |
| Msa0574460 | AT1G59540.2 | 33.993 | 303 | 149 | 11 | 580 | 842 | 3 | 294 | 1.33e-30 | 130 |
| Msa0574460 | AT5G06670.2 | 29.412 | 442 | 243 | 17 | 503 | 901 | 64 | 479 | 2.30e-30 | 130 |
| Msa0574460 | AT5G06670.3 | 29.412 | 442 | 243 | 17 | 503 | 901 | 64 | 479 | 2.30e-30 | 130 |
| Msa0574460 | AT1G21730.1 | 33.429 | 347 | 178 | 16 | 502 | 812 | 72 | 401 | 3.07e-30 | 129 |
| Msa0574460 | AT3G54870.2 | 27.327 | 333 | 184 | 9 | 523 | 805 | 117 | 441 | 4.37e-30 | 129 |
| Msa0574460 | AT3G54870.1 | 27.327 | 333 | 184 | 9 | 523 | 805 | 117 | 441 | 5.03e-30 | 129 |
| Msa0574460 | AT3G54870.3 | 27.327 | 333 | 184 | 9 | 523 | 805 | 117 | 441 | 5.15e-30 | 129 |
| Msa0574460 | AT1G12430.2 | 28.011 | 357 | 187 | 10 | 506 | 806 | 71 | 413 | 5.30e-30 | 129 |
| Msa0574460 | AT1G12430.1 | 28.011 | 357 | 187 | 10 | 506 | 806 | 71 | 413 | 5.71e-30 | 129 |
| Msa0574460 | AT5G06670.5 | 29.412 | 442 | 243 | 17 | 503 | 901 | 64 | 479 | 5.73e-30 | 128 |
| Msa0574460 | AT1G18550.1 | 30.678 | 339 | 187 | 7 | 506 | 805 | 152 | 481 | 7.75e-30 | 127 |
| Msa0574460 | AT5G06670.8 | 29.412 | 442 | 243 | 17 | 503 | 901 | 64 | 479 | 9.11e-30 | 127 |
| Msa0574460 | AT5G06670.4 | 29.412 | 442 | 243 | 17 | 503 | 901 | 64 | 479 | 9.11e-30 | 127 |
| Msa0574460 | AT5G06670.7 | 29.412 | 442 | 243 | 17 | 503 | 901 | 64 | 479 | 9.11e-30 | 127 |
| Msa0574460 | AT5G06670.6 | 28.097 | 452 | 245 | 15 | 503 | 901 | 64 | 488 | 2.39e-29 | 127 |
| Msa0574460 | AT5G06670.1 | 28.097 | 452 | 245 | 15 | 503 | 901 | 64 | 488 | 2.39e-29 | 127 |
| Msa0574460 | AT3G10180.2 | 30.140 | 428 | 218 | 13 | 549 | 903 | 39 | 458 | 9.34e-29 | 125 |
| Msa0574460 | AT3G10180.1 | 30.140 | 428 | 218 | 13 | 549 | 903 | 39 | 458 | 1.08e-28 | 125 |
| Msa0574460 | AT3G12020.4 | 29.443 | 377 | 209 | 12 | 499 | 831 | 63 | 426 | 1.55e-28 | 124 |
| Msa0574460 | AT3G12020.1 | 29.443 | 377 | 209 | 12 | 499 | 831 | 63 | 426 | 1.55e-28 | 124 |
| Msa0574460 | AT5G47820.2 | 29.508 | 366 | 185 | 12 | 506 | 805 | 12 | 370 | 1.63e-28 | 124 |
| Msa0574460 | AT5G47820.1 | 29.508 | 366 | 185 | 12 | 506 | 805 | 12 | 370 | 1.63e-28 | 124 |
| Msa0574460 | AT3G51150.2 | 30.267 | 337 | 199 | 8 | 506 | 812 | 18 | 348 | 2.59e-28 | 124 |
| Msa0574460 | AT3G51150.4 | 30.267 | 337 | 199 | 8 | 506 | 812 | 18 | 348 | 2.59e-28 | 124 |
| Msa0574460 | AT3G51150.3 | 30.267 | 337 | 199 | 8 | 506 | 812 | 18 | 348 | 2.59e-28 | 124 |
| Msa0574460 | AT3G51150.1 | 30.267 | 337 | 199 | 8 | 506 | 812 | 18 | 348 | 2.68e-28 | 123 |
| Msa0574460 | AT3G12020.3 | 29.443 | 377 | 209 | 12 | 499 | 831 | 63 | 426 | 3.56e-28 | 123 |
| Msa0574460 | AT3G12020.2 | 29.443 | 377 | 209 | 12 | 499 | 831 | 63 | 426 | 3.56e-28 | 123 |
| Msa0574460 | AT1G01950.4 | 31.301 | 246 | 134 | 5 | 587 | 806 | 26 | 262 | 1.52e-27 | 120 |
| Msa0574460 | AT3G50240.2 | 31.868 | 273 | 145 | 6 | 572 | 806 | 112 | 381 | 5.27e-27 | 119 |
| Msa0574460 | AT3G50240.3 | 31.868 | 273 | 145 | 6 | 572 | 806 | 10 | 279 | 6.38e-27 | 119 |
| Msa0574460 | AT4G24170.1 | 32.526 | 289 | 166 | 6 | 549 | 812 | 49 | 333 | 6.51e-27 | 119 |
| Msa0574460 | AT4G24170.2 | 32.526 | 289 | 166 | 6 | 549 | 812 | 49 | 333 | 6.51e-27 | 119 |
| Msa0574460 | AT3G50240.1 | 31.868 | 273 | 145 | 6 | 572 | 806 | 112 | 381 | 7.49e-27 | 119 |
| Msa0574460 | AT3G50240.4 | 31.868 | 273 | 145 | 6 | 572 | 806 | 112 | 381 | 8.19e-27 | 119 |
| Msa0574460 | AT4G38950.3 | 28.608 | 388 | 217 | 11 | 506 | 841 | 14 | 393 | 9.23e-27 | 118 |
| Msa0574460 | AT4G38950.5 | 28.608 | 388 | 217 | 11 | 506 | 841 | 14 | 393 | 9.23e-27 | 118 |
| Msa0574460 | AT4G38950.4 | 28.608 | 388 | 217 | 11 | 506 | 841 | 14 | 393 | 9.23e-27 | 118 |
| Msa0574460 | AT4G38950.1 | 28.608 | 388 | 217 | 11 | 506 | 841 | 14 | 393 | 9.23e-27 | 118 |
| Msa0574460 | AT4G38950.2 | 28.608 | 388 | 217 | 11 | 506 | 841 | 14 | 393 | 9.23e-27 | 118 |
| Msa0574460 | AT3G43210.3 | 30.556 | 324 | 184 | 9 | 506 | 799 | 30 | 342 | 1.01e-26 | 118 |
| Msa0574460 | AT3G43210.5 | 30.556 | 324 | 184 | 9 | 506 | 799 | 30 | 342 | 1.01e-26 | 118 |
| Msa0574460 | AT3G43210.2 | 30.556 | 324 | 184 | 9 | 506 | 799 | 30 | 342 | 1.01e-26 | 118 |
| Msa0574460 | AT3G43210.4 | 30.556 | 324 | 184 | 9 | 506 | 799 | 30 | 342 | 1.01e-26 | 118 |
| Msa0574460 | AT3G43210.1 | 30.556 | 324 | 184 | 9 | 506 | 799 | 30 | 342 | 1.01e-26 | 118 |
| Msa0574460 | AT2G21300.2 | 30.275 | 327 | 184 | 11 | 506 | 799 | 25 | 340 | 2.00e-25 | 114 |
| Msa0574460 | AT2G21300.4 | 30.275 | 327 | 184 | 11 | 506 | 799 | 25 | 340 | 2.00e-25 | 114 |
| Msa0574460 | AT2G21300.3 | 30.275 | 327 | 184 | 11 | 506 | 799 | 25 | 340 | 2.00e-25 | 114 |
| Msa0574460 | AT2G21300.1 | 30.275 | 327 | 184 | 11 | 506 | 799 | 25 | 340 | 2.00e-25 | 114 |
| Msa0574460 | AT2G21300.5 | 30.275 | 327 | 184 | 11 | 506 | 799 | 25 | 340 | 2.00e-25 | 114 |
| Msa0574460 | AT5G66310.2 | 30.690 | 290 | 169 | 8 | 549 | 812 | 66 | 349 | 5.22e-25 | 113 |
| Msa0574460 | AT5G66310.3 | 30.690 | 290 | 169 | 8 | 549 | 812 | 66 | 349 | 5.22e-25 | 113 |
| Msa0574460 | AT5G66310.1 | 30.690 | 290 | 169 | 8 | 549 | 812 | 66 | 349 | 5.22e-25 | 113 |
| Msa0574460 | AT5G27950.2 | 34.156 | 243 | 137 | 7 | 581 | 806 | 3 | 239 | 6.21e-25 | 110 |
| Msa0574460 | AT3G16060.1 | 27.901 | 362 | 214 | 10 | 484 | 810 | 148 | 497 | 3.74e-23 | 106 |
| Msa0574460 | AT5G02370.1 | 41.216 | 148 | 84 | 2 | 655 | 801 | 191 | 336 | 4.01e-23 | 105 |
| Msa0574460 | AT5G65460.5 | 31.034 | 261 | 150 | 8 | 609 | 858 | 14 | 255 | 6.48e-23 | 106 |
| Msa0574460 | AT3G51150.5 | 42.405 | 158 | 79 | 3 | 667 | 812 | 38 | 195 | 7.95e-22 | 102 |
| Msa0574460 | AT3G16630.2 | 28.242 | 347 | 188 | 12 | 506 | 805 | 194 | 526 | 4.79e-20 | 96.7 |
| Msa0574460 | AT3G16630.1 | 28.242 | 347 | 188 | 12 | 506 | 805 | 194 | 526 | 4.79e-20 | 96.7 |
| Msa0574460 | AT4G14330.1 | 28.794 | 257 | 157 | 7 | 577 | 815 | 129 | 377 | 4.06e-17 | 87.4 |
| Msa0574460 | AT3G20150.1 | 28.155 | 309 | 165 | 11 | 548 | 805 | 134 | 436 | 6.38e-16 | 83.6 |
| Msa0574460 | AT3G20150.2 | 28.155 | 309 | 165 | 11 | 548 | 805 | 134 | 436 | 7.45e-16 | 83.6 |
| Msa0574460 | AT5G42490.1 | 28.996 | 269 | 159 | 9 | 506 | 748 | 10 | 272 | 2.96e-15 | 81.6 |
| Msa0574460 | AT5G42490.2 | 28.996 | 269 | 159 | 9 | 506 | 748 | 10 | 272 | 2.98e-15 | 81.6 |
| Msa0574460 | AT5G23910.1 | 29.614 | 233 | 137 | 10 | 585 | 811 | 110 | 321 | 1.31e-11 | 69.3 |
| Msa0574460 | AT5G23910.2 | 29.614 | 233 | 137 | 10 | 585 | 811 | 114 | 325 | 1.35e-11 | 69.3 |
Find 219 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCATAGCATCTTGCTTAA+TGG | 0.138061 | 4_1:-78013905 | None:intergenic |
| CATATACCTGATGATTTCTT+TGG | 0.142993 | 4_1:-78016808 | None:intergenic |
| ATTGCATAGTCTTCACAATT+TGG | 0.208087 | 4_1:+78017292 | Msa0574460:three_prime_UTR |
| CATGAATTGATATGAATTTC+AGG | 0.219351 | 4_1:+78010987 | Msa0574460:five_prime_UTR |
| GTTCAAGCGGTAAGGAAATT+TGG | 0.241758 | 4_1:+78016748 | Msa0574460:CDS |
| GAAAAGTTTGATGAATTCTT+TGG | 0.245198 | 4_1:+78011877 | Msa0574460:CDS |
| TTCAATGGAATTGATAGAAT+TGG | 0.246918 | 4_1:+78011171 | Msa0574460:CDS |
| TCAGGCTTTGAAAAGTTCTT+TGG | 0.248226 | 4_1:+78011005 | Msa0574460:five_prime_UTR |
| ATGTACATCTTTCCCTTCTT+TGG | 0.259854 | 4_1:-78014344 | None:intergenic |
| CAAGGAGACGAGAGAATTAT+TGG | 0.272171 | 4_1:+78015883 | Msa0574460:CDS |
| TGATTATATTTACATGAATC+TGG | 0.283378 | 4_1:-78017517 | None:intergenic |
| CCTTACCGCTTGAACAGTTC+TGG | 0.284491 | 4_1:-78016740 | None:intergenic |
| AATGAAGTTCAAGAATTAAA+AGG | 0.287186 | 4_1:+78014133 | Msa0574460:CDS |
| TTATCACTTGTTGCTCCATT+TGG | 0.289115 | 4_1:-78014894 | None:intergenic |
| ACCATTCCTAATAGACAAAA+AGG | 0.298283 | 4_1:+78014264 | Msa0574460:CDS |
| ATATACCTGATGATTTCTTT+GGG | 0.299699 | 4_1:-78016807 | None:intergenic |
| AGCTAAACATCGATCAGTTT+TGG | 0.303316 | 4_1:+78011319 | Msa0574460:intron |
| GCCTCATAGACTATGAGATT+TGG | 0.306492 | 4_1:+78014976 | Msa0574460:CDS |
| TGTGCATAGTGTTGTCAAAT+AGG | 0.310124 | 4_1:+78010902 | Msa0574460:five_prime_UTR |
| GTAAGCTTGCTGTTTCTATA+TGG | 0.318913 | 4_1:-78015613 | None:intergenic |
| GACTACAGTACCCAGAGAAT+TGG | 0.321198 | 4_1:+78011131 | Msa0574460:CDS |
| GCTTTAGGTGTTCCAATACT+AGG | 0.326716 | 4_1:-78017219 | None:intergenic |
| TTCAGATGTCATTAAGTTGA+TGG | 0.330356 | 4_1:+78015241 | Msa0574460:CDS |
| AAATAGTCTTCTTCCTTCAT+TGG | 0.335319 | 4_1:+78011352 | Msa0574460:CDS |
| TTCCTTGATTTGCACACACT+TGG | 0.341494 | 4_1:+78015149 | Msa0574460:CDS |
| CAAAACGGTGGCAATAAAAT+AGG | 0.342980 | 4_1:+78017244 | Msa0574460:exon |
| CTGAAAGCTTTGGATGGATT+GGG | 0.343783 | 4_1:+78011640 | Msa0574460:CDS |
| TCAATGGAATTGATAGAATT+GGG | 0.345802 | 4_1:+78011172 | Msa0574460:CDS |
| CGTGGGAAGGATTTCAAGTC+TGG | 0.346680 | 4_1:+78015424 | Msa0574460:CDS |
| GTAGATCGATCTGATGTAAC+TGG | 0.347515 | 4_1:+78015499 | Msa0574460:CDS |
| GGAAGATCTGAATAGCTTCC+AGG | 0.353167 | 4_1:-78012556 | None:intergenic |
| CCTCATAGACTATGAGATTT+GGG | 0.354882 | 4_1:+78014977 | Msa0574460:CDS |
| TTCACCGGACCCGCCATAGA+AGG | 0.356160 | 4_1:-78012043 | None:intergenic |
| GTCGTAGTTTGTTTAGTATC+TGG | 0.356495 | 4_1:-78011439 | None:intergenic |
| TTCTTCGGATTCAAAATATC+AGG | 0.359770 | 4_1:+78013715 | Msa0574460:CDS |
| CAGGCTTTGAAAAGTTCTTT+GGG | 0.360008 | 4_1:+78011006 | Msa0574460:five_prime_UTR |
| CACCATTTGGTGTGGACAAC+AGG | 0.361444 | 4_1:+78011975 | Msa0574460:CDS |
| CTTCGGACTACCCAATTCTC+TGG | 0.368459 | 4_1:-78011142 | None:intergenic |
| AAAAGTTTGATGAATTCTTT+GGG | 0.371582 | 4_1:+78011878 | Msa0574460:CDS |
| ACGACCTGGTCCCGTAACTA+TGG | 0.373589 | 4_1:+78011457 | Msa0574460:CDS |
| TTCTTTGAAATGTATCTTTG+TGG | 0.376598 | 4_1:+78011049 | Msa0574460:five_prime_UTR |
| CTGAAATTCATATCAATTCA+TGG | 0.376686 | 4_1:-78010986 | None:intergenic |
| TCGATCTACTCTTTCACTTC+CGG | 0.379312 | 4_1:-78015485 | None:intergenic |
| TTTCATTCTTCCCCACCATT+TGG | 0.383521 | 4_1:+78011962 | Msa0574460:CDS |
| TAAAACGTTTCTGAAAGCTT+TGG | 0.385889 | 4_1:+78011630 | Msa0574460:CDS |
| ATGTATCTTTGTGGAAATCT+TGG | 0.392242 | 4_1:+78011058 | Msa0574460:five_prime_UTR |
| CAATTCTGCTTTAGCATCCC+TGG | 0.394785 | 4_1:-78013624 | None:intergenic |
| AACTGACGTCTGAGTTAATC+TGG | 0.395500 | 4_1:-78015784 | None:intergenic |
| AGACATAGGTGAAAGTGATT+TGG | 0.401644 | 4_1:+78014306 | Msa0574460:CDS |
| GTACTCGAGGCACTTGCATC+TGG | 0.402111 | 4_1:+78013164 | Msa0574460:CDS |
| GACGAGAGAATTATTGGAAC+AGG | 0.402509 | 4_1:+78015889 | Msa0574460:CDS |
| AATTTATAACAGTTTGCAAT+TGG | 0.410688 | 4_1:-78013757 | None:intergenic |
| TCTGAAAGCTTTGGATGGAT+TGG | 0.411229 | 4_1:+78011639 | Msa0574460:CDS |
| GAAAGTATTACCATAGTTAC+GGG | 0.415524 | 4_1:-78011467 | None:intergenic |
| CTATGAGATTTGGGTTCAAA+TGG | 0.422199 | 4_1:+78014986 | Msa0574460:CDS |
| ATTACACTCCTCTACATAAA+CGG | 0.425657 | 4_1:-78013935 | None:intergenic |
| TAAGGAGATTGAGGATTCTT+CGG | 0.427094 | 4_1:+78013700 | Msa0574460:CDS |
| TGTAAATATAATCAAGTCAT+TGG | 0.428018 | 4_1:+78017526 | Msa0574460:three_prime_UTR |
| GCATCAAGCCCTCGTGGGTA+TGG | 0.430208 | 4_1:+78011929 | Msa0574460:CDS |
| TACATCTTTCCCTTCTTTGG+AGG | 0.431598 | 4_1:-78014341 | None:intergenic |
| AGAAAGTATTACCATAGTTA+CGG | 0.436470 | 4_1:-78011468 | None:intergenic |
| GAATGCAGTTAAGGAGATTG+AGG | 0.439370 | 4_1:+78013691 | Msa0574460:CDS |
| CAGATGGGGAATTCATTACT+AGG | 0.445732 | 4_1:-78011101 | None:intergenic |
| CCCACGAGGGCTTGATGCAT+TGG | 0.446147 | 4_1:-78011924 | None:intergenic |
| AGAACTGAGGAATGCAGTTA+AGG | 0.446648 | 4_1:+78013682 | Msa0574460:CDS |
| TGCTGTTTCTATATGGTACA+TGG | 0.447397 | 4_1:-78015606 | None:intergenic |
| CAACTTCTGCAAACGTCTCT+TGG | 0.452565 | 4_1:+78015637 | Msa0574460:CDS |
| ATTAAAAGACAATCCACAAC+AGG | 0.454077 | 4_1:-78011845 | None:intergenic |
| TGGCACGTGCTATGTAAATA+CGG | 0.456521 | 4_1:+78017312 | Msa0574460:three_prime_UTR |
| GGTCACAGAGGAAGAAAAGA+AGG | 0.458384 | 4_1:+78013469 | Msa0574460:CDS |
| AACAAATCGCTTTCTGCCCT+CGG | 0.458863 | 4_1:+78015550 | Msa0574460:CDS |
| TGTATCTTTGTGGAAATCTT+GGG | 0.460066 | 4_1:+78011059 | Msa0574460:five_prime_UTR |
| GTTTCTCCATTCGCCTGAAA+AGG | 0.461490 | 4_1:+78016194 | Msa0574460:CDS |
| GTTTCTCCGTTCGCCTGAAA+AGG | 0.462321 | 4_1:+78016419 | Msa0574460:CDS |
| GGTGGCATGCTTGTTGAGAA+AGG | 0.467353 | 4_1:+78012950 | Msa0574460:CDS |
| CTAGTAATGAATTCCCCATC+TGG | 0.474084 | 4_1:+78011102 | Msa0574460:exon |
| CCCAAATCTCATAGTCTATG+AGG | 0.474865 | 4_1:-78014977 | None:intergenic |
| ACATCTTTCCCTTCTTTGGA+GGG | 0.475453 | 4_1:-78014340 | None:intergenic |
| TGTAACTGGGGATAGACTTA+AGG | 0.475596 | 4_1:+78015513 | Msa0574460:CDS |
| AAGATTATTTGAAGATATGT+TGG | 0.476204 | 4_1:+78017405 | Msa0574460:three_prime_UTR |
| ACTACAGTACCCAGAGAATT+GGG | 0.476217 | 4_1:+78011132 | Msa0574460:CDS |
| GTCATTAAGTTGATGGACAT+TGG | 0.476978 | 4_1:+78015248 | Msa0574460:CDS |
| TTGTCAATTTAGTTCCCTAC+AGG | 0.477464 | 4_1:+78013778 | Msa0574460:CDS |
| TTCTTCCCCACCATTTGGTG+TGG | 0.481181 | 4_1:+78011967 | Msa0574460:CDS |
| TCCTTGATTTGCACACACTT+GGG | 0.481299 | 4_1:+78015150 | Msa0574460:CDS |
| GAAGAAGACTATTTAACCAT+TGG | 0.487527 | 4_1:-78011343 | None:intergenic |
| TCCCAAGTGTGTGCAAATCA+AGG | 0.488526 | 4_1:-78015151 | None:intergenic |
| CTTGTTGAGAAAGGTTTCAC+AGG | 0.492523 | 4_1:+78012959 | Msa0574460:CDS |
| TTCGGCCCTGCCGCAACTCA+AGG | 0.493045 | 4_1:+78014391 | Msa0574460:CDS |
| AGAGTTTCCTCAGTTGAACT+AGG | 0.493118 | 4_1:+78015845 | Msa0574460:CDS |
| CTGTAGTCTTTATGCCAGAT+GGG | 0.493266 | 4_1:-78011116 | None:intergenic |
| TTCCTGTTGTCCACACCAAA+TGG | 0.497035 | 4_1:-78011977 | None:intergenic |
| ACGGGGAACATGCTAGCATC+TGG | 0.497721 | 4_1:-78015209 | None:intergenic |
| CCAGAACTGTTCAAGCGGTA+AGG | 0.498338 | 4_1:+78016740 | Msa0574460:CDS |
| GTGCATAGTGTTGTCAAATA+GGG | 0.501026 | 4_1:+78010903 | Msa0574460:five_prime_UTR |
| GTGGTAAATCCCTCCAAAGA+AGG | 0.504014 | 4_1:+78014331 | Msa0574460:CDS |
| CTTGGGTTGCTTGTCCCACT+AGG | 0.504051 | 4_1:+78011076 | Msa0574460:five_prime_UTR |
| TGACAACACTTAATAGCGAC+TGG | 0.504078 | 4_1:-78012763 | None:intergenic |
| CTTTAGGTGTTCCAATACTA+GGG | 0.505709 | 4_1:-78017218 | None:intergenic |
| CCAGAAACTGAAATCATTGT+GGG | 0.507666 | 4_1:+78013879 | Msa0574460:intron |
| ATTCCATTGAAAATGTCCTT+CGG | 0.509123 | 4_1:-78011159 | None:intergenic |
| CTCAATTCATGTTCGTGGGA+AGG | 0.509216 | 4_1:+78015411 | Msa0574460:CDS |
| GAAAGCGTCGAGAGAAGAAA+CGG | 0.511299 | 4_1:+78012800 | Msa0574460:CDS |
| ATTTGAAGATATGTTGGTGC+AGG | 0.513109 | 4_1:+78017411 | Msa0574460:three_prime_UTR |
| CAGATGTGGTAGATGGCATT+CGG | 0.514146 | 4_1:-78016771 | None:intergenic |
| GGGATCTATGAAGCCTGTTG+TGG | 0.518123 | 4_1:+78011832 | Msa0574460:intron |
| GTGGTCTCAATTCATGTTCG+TGG | 0.519380 | 4_1:+78015406 | Msa0574460:CDS |
| AATAAACCTTGAGTTGCGGC+AGG | 0.519535 | 4_1:-78014397 | None:intergenic |
| ATACCTGATGATTTCTTTGG+GGG | 0.522385 | 4_1:-78016805 | None:intergenic |
| AGGTATCTTATACCTTCTCT+AGG | 0.522675 | 4_1:-78011687 | None:intergenic |
| ACTGTAGTCTTTATGCCAGA+TGG | 0.522951 | 4_1:-78011117 | None:intergenic |
| CACAGTTGGAAGAAGAAACC+AGG | 0.523954 | 4_1:+78013606 | Msa0574460:CDS |
| TTTGTTGAGAAGTCCAATGA+AGG | 0.525056 | 4_1:-78011365 | None:intergenic |
| TTATACACATTAATTGATCT+CGG | 0.527080 | 4_1:-78017469 | None:intergenic |
| ATTAAGCAAGATGCTATGAA+AGG | 0.527162 | 4_1:+78013907 | Msa0574460:CDS |
| TTTCTGACATCAAGGAGTCT+CGG | 0.527207 | 4_1:+78016274 | Msa0574460:CDS |
| TTTGCTACAGATGTGGTAGA+TGG | 0.530557 | 4_1:-78016778 | None:intergenic |
| AAGTCTGGTTCTACCATGCA+TGG | 0.537382 | 4_1:+78015439 | Msa0574460:CDS |
| CTTCATTTGGTAGATTTGGC+CGG | 0.537780 | 4_1:+78015466 | Msa0574460:intron |
| TTAAGCAAGATGCTATGAAA+GGG | 0.544509 | 4_1:+78013908 | Msa0574460:CDS |
| TTTCTTAGAAATACCACTGA+CGG | 0.546949 | 4_1:-78016091 | None:intergenic |
| GCTGTTTCTATATGGTACAT+GGG | 0.547626 | 4_1:-78015605 | None:intergenic |
| TATACCTGATGATTTCTTTG+GGG | 0.547863 | 4_1:-78016806 | None:intergenic |
| ACGTTTCTGAAAGCTTTGGA+TGG | 0.550857 | 4_1:+78011634 | Msa0574460:CDS |
| AGGTCTGATATTTCAAACCT+TGG | 0.556672 | 4_1:-78011667 | None:intergenic |
| CTCTTCAATATAGGATGAGA+AGG | 0.556956 | 4_1:+78013448 | Msa0574460:intron |
| TTGACTCAATCTCAATCATA+CGG | 0.558775 | 4_1:+78015176 | Msa0574460:CDS |
| CTCGGCAATCGATTTGAGAT+CGG | 0.562089 | 4_1:-78017451 | None:intergenic |
| AGGTGATATCAAACAACGAA+TGG | 0.562769 | 4_1:+78016155 | Msa0574460:intron |
| AGGTGATATCAAACAACGAA+TGG | 0.562769 | 4_1:+78016380 | Msa0574460:intron |
| TGAAGCGAAATGCTCACAGT+TGG | 0.563127 | 4_1:+78013592 | Msa0574460:CDS |
| ATCTACCACATCTGTAGCAA+AGG | 0.563240 | 4_1:+78016780 | Msa0574460:CDS |
| ATCAACTTAATGACATCTGA+AGG | 0.565636 | 4_1:-78015239 | None:intergenic |
| TTTGGGTGATATGACACAAA+GGG | 0.566204 | 4_1:+78011023 | Msa0574460:five_prime_UTR |
| AAAGAAGTAGCCGTTCTCAC+AGG | 0.566849 | 4_1:+78015309 | Msa0574460:CDS |
| TGGATGGATTGGGATTGCCA+AGG | 0.567685 | 4_1:+78011650 | Msa0574460:CDS |
| TATGAGGCTTCCTCTGCTTG+TGG | 0.568259 | 4_1:-78014961 | None:intergenic |
| TTCAGAATTTCCACAAGCAG+AGG | 0.568490 | 4_1:+78014951 | Msa0574460:CDS |
| GGGGTCCTTTGCTACAGATG+TGG | 0.569091 | 4_1:-78016785 | None:intergenic |
| TCCAGAAACTGAAATCATTG+TGG | 0.570027 | 4_1:+78013878 | Msa0574460:intron |
| CAGTCTATTGTAGAAGACAT+AGG | 0.571368 | 4_1:+78014292 | Msa0574460:CDS |
| CTGTTGTCCACACCAAATGG+TGG | 0.571386 | 4_1:-78011974 | None:intergenic |
| TCGCTATTAAGTGTTGTCAA+TGG | 0.571393 | 4_1:+78012767 | Msa0574460:CDS |
| TCCGTTCGCCTGAAAAGGCT+AGG | 0.572782 | 4_1:+78016424 | Msa0574460:CDS |
| CGTGGAACTTATGACCAACC+TGG | 0.575056 | 4_1:-78012516 | None:intergenic |
| AGGTGAAAGTGATTTGGTTG+TGG | 0.575266 | 4_1:+78014312 | Msa0574460:CDS |
| TACCTGATGATTTCTTTGGG+GGG | 0.577064 | 4_1:-78016804 | None:intergenic |
| TGGTATATTAATGAAGCTGA+TGG | 0.578057 | 4_1:-78012496 | None:intergenic |
| TTCGGACTACCCAATTCTCT+GGG | 0.578232 | 4_1:-78011141 | None:intergenic |
| TCACCGGACCCGCCATAGAA+GGG | 0.578658 | 4_1:-78012042 | None:intergenic |
| AAAGATTTAACCTGTGAGAA+CGG | 0.579504 | 4_1:-78015319 | None:intergenic |
| TGGTCTCAATTCATGTTCGT+GGG | 0.580421 | 4_1:+78015407 | Msa0574460:CDS |
| TGGTAAATCCCTCCAAAGAA+GGG | 0.581758 | 4_1:+78014332 | Msa0574460:CDS |
| ATCAGCTTCATTAATATACC+AGG | 0.584560 | 4_1:+78012498 | Msa0574460:CDS |
| CAAATGAAGATTACCATGCA+TGG | 0.585102 | 4_1:-78015452 | None:intergenic |
| TCCAATGCATCAAGCCCTCG+TGG | 0.586021 | 4_1:+78011923 | Msa0574460:CDS |
| TAGATCGATCTGATGTAACT+GGG | 0.587217 | 4_1:+78015500 | Msa0574460:CDS |
| ATTACCATAGTTACGGGACC+AGG | 0.587388 | 4_1:-78011461 | None:intergenic |
| TGTTGTCCACACCAAATGGT+GGG | 0.588918 | 4_1:-78011973 | None:intergenic |
| CTGTTTCTATATGGTACATG+GGG | 0.589847 | 4_1:-78015604 | None:intergenic |
| TACTTGAATTCTTGTCACAT+TGG | 0.591494 | 4_1:+78017557 | Msa0574460:three_prime_UTR |
| TATAAATAAACCTTGAGTTG+CGG | 0.591595 | 4_1:-78014401 | None:intergenic |
| GAACACCTAAAGCTCCAAAA+CGG | 0.591804 | 4_1:+78017229 | Msa0574460:CDS |
| AGGGAAAACCGTTTATGTAG+AGG | 0.593319 | 4_1:+78013927 | Msa0574460:CDS |
| AACGGTGGCAATAAAATAGG+AGG | 0.593475 | 4_1:+78017247 | Msa0574460:exon |
| TCACTGAACGCCTCCGTCAG+TGG | 0.595960 | 4_1:+78016078 | Msa0574460:CDS |
| CGGATTCAAAATATCAGGAG+TGG | 0.598843 | 4_1:+78013720 | Msa0574460:CDS |
| TCACTGAGCGCGTCCGTCGG+TGG | 0.599386 | 4_1:+78016303 | Msa0574460:CDS |
| GACAACAATAGTCTTGCTCT+CGG | 0.600715 | 4_1:+78016504 | Msa0574460:CDS |
| TTCTCAACAAATGTCACAGA+TGG | 0.602993 | 4_1:+78011377 | Msa0574460:CDS |
| TTCATTACTAGGTTCCTAGT+GGG | 0.606226 | 4_1:-78011090 | None:intergenic |
| AACACTTAATAGCGACTGGG+TGG | 0.606247 | 4_1:-78012759 | None:intergenic |
| AAGGCTAGGCGAGTAACTCA+AGG | 0.607220 | 4_1:+78016438 | Msa0574460:CDS |
| AAATCACTGAGCGCGTCCGT+CGG | 0.607472 | 4_1:+78016300 | Msa0574460:CDS |
| TCCGTCTCGCAGTTGCTGTG+TGG | 0.608668 | 4_1:-78017344 | None:intergenic |
| GGAAGCTTACATCTGAGTCA+AGG | 0.612208 | 4_1:+78011996 | Msa0574460:CDS |
| AACAGTCAATGTGAGGTGGA+AGG | 0.613000 | 4_1:+78011204 | Msa0574460:CDS |
| GCTTCATTAATATACCAGGT+TGG | 0.616851 | 4_1:+78012502 | Msa0574460:CDS |
| TGCTTGTGGAAATTCTGAAG+AGG | 0.620627 | 4_1:-78014947 | None:intergenic |
| GTCAAGAATAAGAGTACTCG+AGG | 0.624179 | 4_1:+78013151 | Msa0574460:CDS |
| TCCACACAGCAACTGCGAGA+CGG | 0.624466 | 4_1:+78017343 | Msa0574460:three_prime_UTR |
| ATTCATTACTAGGTTCCTAG+TGG | 0.626493 | 4_1:-78011091 | None:intergenic |
| GCTCTCGGCACAGAAACTGA+TGG | 0.627230 | 4_1:+78016519 | Msa0574460:CDS |
| CAGAGAATTGGGTAGTCCGA+AGG | 0.627997 | 4_1:+78011143 | Msa0574460:CDS |
| TTCTGAGATGCATGTATGAG+TGG | 0.628179 | 4_1:-78014073 | None:intergenic |
| GGCAAAGATTACATCTCCGA+GGG | 0.630186 | 4_1:-78015566 | None:intergenic |
| ATTATCCAGAACTGTTCAAG+CGG | 0.630315 | 4_1:+78016735 | Msa0574460:CDS |
| TGAAATATCAGACCTAGAGA+AGG | 0.633727 | 4_1:+78011675 | Msa0574460:CDS |
| GTTGTCCACACCAAATGGTG+GGG | 0.633986 | 4_1:-78011972 | None:intergenic |
| AAGGCTAGACGAGTAACTCA+AGG | 0.636422 | 4_1:+78016213 | Msa0574460:CDS |
| AGTAAACAGTCAATGTGAGG+TGG | 0.636730 | 4_1:+78011200 | Msa0574460:CDS |
| AGGAGCTGCACGAAATAACA+AGG | 0.643060 | 4_1:+78015865 | Msa0574460:CDS |
| CCAATGCATCAAGCCCTCGT+GGG | 0.645424 | 4_1:+78011924 | Msa0574460:CDS |
| CTTTGGGTGATATGACACAA+AGG | 0.646060 | 4_1:+78011022 | Msa0574460:five_prime_UTR |
| TGGAACTAAAGAAGAGAGTG+AGG | 0.647648 | 4_1:+78013184 | Msa0574460:CDS |
| CTTAGAAATACCACTGACGG+AGG | 0.648827 | 4_1:-78016088 | None:intergenic |
| ACACTTAATAGCGACTGGGT+GGG | 0.660957 | 4_1:-78012758 | None:intergenic |
| GACAACACTTAATAGCGACT+GGG | 0.660965 | 4_1:-78012762 | None:intergenic |
| ATAAACCTTGAGTTGCGGCA+GGG | 0.661991 | 4_1:-78014396 | None:intergenic |
| TGTAGTCTTTATGCCAGATG+GGG | 0.663824 | 4_1:-78011115 | None:intergenic |
| TGTAGTAAACAGTCAATGTG+AGG | 0.665373 | 4_1:+78011197 | Msa0574460:CDS |
| TGCAGCTCCTAGTTCAACTG+AGG | 0.670154 | 4_1:-78015852 | None:intergenic |
| TTAAGAGCATGCTTGAGCAG+TGG | 0.671840 | 4_1:+78011404 | Msa0574460:CDS |
| TAGGTTGACGAAAATGCTAG+AGG | 0.672188 | 4_1:+78013511 | Msa0574460:CDS |
| GGGCAAAGATTACATCTCCG+AGG | 0.679565 | 4_1:-78015567 | None:intergenic |
| TGCACAGAACAATGTCGACT+AGG | 0.680566 | 4_1:-78010885 | None:intergenic |
| CACCTAAAGCTCCAAAACGG+TGG | 0.682166 | 4_1:+78017232 | Msa0574460:CDS |
| ATACTAAACAAACTACGACC+TGG | 0.683316 | 4_1:+78011443 | Msa0574460:CDS |
| TCTCTTAGAAATACCACCGA+CGG | 0.689341 | 4_1:-78016316 | None:intergenic |
| GTTCTGCTTGTGTCGATATG+CGG | 0.689382 | 4_1:-78012992 | None:intergenic |
| TCGAAGATCCATACCCACGA+GGG | 0.701487 | 4_1:-78011937 | None:intergenic |
| AGTATCGACTCGAAGAACTG+AGG | 0.702986 | 4_1:+78013669 | Msa0574460:CDS |
| CTCGAAGATCCATACCCACG+AGG | 0.704068 | 4_1:-78011938 | None:intergenic |
| GGAGCAACAAGTGATAAACT+CGG | 0.708717 | 4_1:+78014900 | Msa0574460:CDS |
| AGATCGATCTGATGTAACTG+GGG | 0.710642 | 4_1:+78015501 | Msa0574460:CDS |
| ACAGTTGGAAGAAGAAACCA+GGG | 0.711857 | 4_1:+78013607 | Msa0574460:CDS |
| ATAGGATGAGAAGGTCACAG+AGG | 0.726695 | 4_1:+78013457 | Msa0574460:intron |
| GAATAGCGGTTATAGCGTAG+CGG | 0.740191 | 4_1:+78010855 | None:intergenic |
| GGTTGGTCATAAGTTCCACG+AGG | 0.747813 | 4_1:+78012519 | Msa0574460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAAAGATATTTTTAAAAA+AGG | - | chr4_1:78015074-78015093 | None:intergenic | 10.0% |
| !!! | CATTTTTTTTTTAATTCAAT+TGG | + | chr4_1:78018027-78018046 | Msa0574460:intron | 10.0% |
| !! | AAAATTTGAAGGAATATATA+AGG | - | chr4_1:78013253-78013272 | None:intergenic | 15.0% |
| !! | AAAACGAAAAAGAAATAATT+AGG | + | chr4_1:78013492-78013511 | Msa0574460:CDS | 15.0% |
| !! | AATTACATTCAAATGATTAA+AGG | - | chr4_1:78014032-78014051 | None:intergenic | 15.0% |
| !!! | TTTAAATTCAACAAGATTTT+CGG | + | chr4_1:78014373-78014392 | Msa0574460:CDS | 15.0% |
| !!! | TTTAAAAAAGGATATCTTTT+TGG | - | chr4_1:78015062-78015081 | None:intergenic | 15.0% |
| !! | AAAGTGATAATTTACTATAT+AGG | + | chr4_1:78017111-78017130 | Msa0574460:intron | 15.0% |
| !! | ACTACTTATTATATTTACAT+AGG | - | chr4_1:78018922-78018941 | None:intergenic | 15.0% |
| !! | ATAATCTATGCATAAAATCA+CGG | - | chr4_1:78011732-78011751 | None:intergenic | 20.0% |
| !! | AAAAGTTTGATGAATTCTTT+GGG | + | chr4_1:78011878-78011897 | Msa0574460:CDS | 20.0% |
| !! | ATGAGTTTAATAAAATTCAC+CGG | - | chr4_1:78012061-78012080 | None:intergenic | 20.0% |
| !! | AAAATCCAATTTCATAAACA+CGG | + | chr4_1:78012126-78012145 | Msa0574460:intron | 20.0% |
| !!! | TAGTTTTTATAGTACAAGTT+AGG | - | chr4_1:78012224-78012243 | None:intergenic | 20.0% |
| !! | TTCTTGTATTTATAAGTGAT+TGG | + | chr4_1:78012446-78012465 | Msa0574460:intron | 20.0% |
| !! | ACAATATTTATGAAACTGTA+TGG | - | chr4_1:78012907-78012926 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTGTTTGTTTAG+CGG | + | chr4_1:78012928-78012947 | Msa0574460:intron | 20.0% |
| !!! | TCTAGTCATATTTTTAAAAG+TGG | + | chr4_1:78013225-78013244 | Msa0574460:intron | 20.0% |
| !!! | TTCCTTCAAATTTTGAAAAT+TGG | + | chr4_1:78013259-78013278 | Msa0574460:intron | 20.0% |
| !!! | TACCAATTTTCAAAATTTGA+AGG | - | chr4_1:78013264-78013283 | None:intergenic | 20.0% |
| !! | AATATTGATATACTATAGAC+AGG | + | chr4_1:78013383-78013402 | Msa0574460:intron | 20.0% |
| !! | ATATTGATATACTATAGACA+GGG | + | chr4_1:78013384-78013403 | Msa0574460:intron | 20.0% |
| !! | AATTTATAACAGTTTGCAAT+TGG | - | chr4_1:78013760-78013779 | None:intergenic | 20.0% |
| !!! | ACATTTTTTTATTTTCAGCA+AGG | - | chr4_1:78014111-78014130 | None:intergenic | 20.0% |
| !! | AATGAAGTTCAAGAATTAAA+AGG | + | chr4_1:78014133-78014152 | Msa0574460:CDS | 20.0% |
| !! | CACTTACATAATATACAAAA+GGG | - | chr4_1:78014183-78014202 | None:intergenic | 20.0% |
| !! | ACACTTACATAATATACAAA+AGG | - | chr4_1:78014184-78014203 | None:intergenic | 20.0% |
| !! | AAACATTAGAACTAAAACTA+AGG | - | chr4_1:78014529-78014548 | None:intergenic | 20.0% |
| !! | ATAAAATCAATATGTCAAGA+GGG | - | chr4_1:78014810-78014829 | None:intergenic | 20.0% |
| !! | TATAAAATCAATATGTCAAG+AGG | - | chr4_1:78014811-78014830 | None:intergenic | 20.0% |
| !! | AATAAAAAGCTTTCATTTCA+AGG | - | chr4_1:78015354-78015373 | None:intergenic | 20.0% |
| !!! | AAAATTCAAAAAGTATCAAG+TGG | + | chr4_1:78016111-78016130 | Msa0574460:CDS | 20.0% |
| !!! | TTTTACTTTTATCTCCTAAA+AGG | - | chr4_1:78016982-78017001 | None:intergenic | 20.0% |
| !!! | TTTCTTCACAATTTAATTTC+AGG | + | chr4_1:78017183-78017202 | Msa0574460:intron | 20.0% |
| !! | AAGATTATTTGAAGATATGT+TGG | + | chr4_1:78017405-78017424 | Msa0574460:three_prime_UTR | 20.0% |
| !! | TTATACACATTAATTGATCT+CGG | - | chr4_1:78017472-78017491 | None:intergenic | 20.0% |
| !! | TGATTATATTTACATGAATC+TGG | - | chr4_1:78017520-78017539 | None:intergenic | 20.0% |
| !! | TGTAAATATAATCAAGTCAT+TGG | + | chr4_1:78017526-78017545 | Msa0574460:three_prime_UTR | 20.0% |
| !! | GTTTATCAATAATATCAATG+AGG | + | chr4_1:78017729-78017748 | Msa0574460:intron | 20.0% |
| !!! | TTTATCCAAGTTTTTTTTCA+TGG | - | chr4_1:78017814-78017833 | None:intergenic | 20.0% |
| !! | AGAAATATCAATAAGCTATT+GGG | - | chr4_1:78017923-78017942 | None:intergenic | 20.0% |
| !! | TAGAAATATCAATAAGCTAT+TGG | - | chr4_1:78017924-78017943 | None:intergenic | 20.0% |
| !!! | ACTCATTTTATTAAAGTTGT+AGG | + | chr4_1:78018002-78018021 | Msa0574460:intron | 20.0% |
| !! | AAAATTAACTTCTAACATGT+TGG | - | chr4_1:78018143-78018162 | None:intergenic | 20.0% |
| !! | TACAAAATAACTGTTATACA+TGG | - | chr4_1:78018239-78018258 | None:intergenic | 20.0% |
| !! | ATTTAGTATTCATTCATCTT+TGG | + | chr4_1:78018673-78018692 | Msa0574460:intron | 20.0% |
| ! | CTGAAATTCATATCAATTCA+TGG | - | chr4_1:78010989-78011008 | None:intergenic | 25.0% |
| ! | CATGAATTGATATGAATTTC+AGG | + | chr4_1:78010987-78011006 | Msa0574460:five_prime_UTR | 25.0% |
| !!! | TTCTTTGAAATGTATCTTTG+TGG | + | chr4_1:78011049-78011068 | Msa0574460:five_prime_UTR | 25.0% |
| ! | TTCAATGGAATTGATAGAAT+TGG | + | chr4_1:78011171-78011190 | Msa0574460:CDS | 25.0% |
| ! | TCAATGGAATTGATAGAATT+GGG | + | chr4_1:78011172-78011191 | Msa0574460:CDS | 25.0% |
| !!! | AGAAAGTATTACCATAGTTA+CGG | - | chr4_1:78011471-78011490 | None:intergenic | 25.0% |
| ! | AATTTACTTCAACAATACGT+TGG | + | chr4_1:78011507-78011526 | Msa0574460:intron | 25.0% |
| ! | ACAAAAAAATCCAGATTGAA+AGG | - | chr4_1:78011561-78011580 | None:intergenic | 25.0% |
| !!! | AATCTGGATTTTTTTGTTGT+AGG | + | chr4_1:78011564-78011583 | Msa0574460:intron | 25.0% |
| !! | TTAACATTTTCTGATTGTGA+TGG | - | chr4_1:78011613-78011632 | None:intergenic | 25.0% |
| ! | AATCACGGTACAAAAAAAAT+AGG | - | chr4_1:78011717-78011736 | None:intergenic | 25.0% |
| ! | GAAAAGTTTGATGAATTCTT+TGG | + | chr4_1:78011877-78011896 | Msa0574460:CDS | 25.0% |
| ! | GTTAATGAGAAAACTTATCT+AGG | + | chr4_1:78012155-78012174 | Msa0574460:intron | 25.0% |
| ! | ATACAAGAACGCAATATAAT+CGG | - | chr4_1:78012435-78012454 | None:intergenic | 25.0% |
| !!! | CATCATTTCTGATATTTTTG+CGG | - | chr4_1:78012584-78012603 | None:intergenic | 25.0% |
| ! | ATCTGAATACATGTATCTAA+AGG | - | chr4_1:78012643-78012662 | None:intergenic | 25.0% |
| !!! | GTTATTTTTGTTTGTTTAGC+GGG | + | chr4_1:78012929-78012948 | Msa0574460:intron | 25.0% |
| !! | TCAGCAAAGTAATCTTTTTA+AGG | + | chr4_1:78013109-78013128 | Msa0574460:intron | 25.0% |
| !!! | AAAGTAATCTTTTTAAGGCT+CGG | + | chr4_1:78013114-78013133 | Msa0574460:CDS | 25.0% |
| !!! | TTTCGCTTCATATGTTTTTT+TGG | - | chr4_1:78013582-78013601 | None:intergenic | 25.0% |
| ! | AAGCACAAAATTGTAATGTT+TGG | - | chr4_1:78013846-78013865 | None:intergenic | 25.0% |
| ! | AAATGACATTCTAACAACAA+AGG | - | chr4_1:78013973-78013992 | None:intergenic | 25.0% |
| !!! | CATTTGAATGTAATTTGTTC+AGG | + | chr4_1:78014037-78014056 | Msa0574460:intron | 25.0% |
| !!! | TTTTTTATTTTCAGCAAGGA+CGG | - | chr4_1:78014107-78014126 | None:intergenic | 25.0% |
| !! | GTTTTTCCTTTTTGTCTATT+AGG | - | chr4_1:78014273-78014292 | None:intergenic | 25.0% |
| !! | TATAAATAAACCTTGAGTTG+CGG | - | chr4_1:78014404-78014423 | None:intergenic | 25.0% |
| !!! | ACTATTCCATTTTTGAGATT+AGG | + | chr4_1:78014427-78014446 | Msa0574460:intron | 25.0% |
| !! | AATTTTCATCTCTGGATATA+AGG | - | chr4_1:78014468-78014487 | None:intergenic | 25.0% |
| ! | AATGTATGTATATTCGCTTA+TGG | + | chr4_1:78014746-78014765 | Msa0574460:intron | 25.0% |
| !! | AGAAGGTAATTTGTACAATA+AGG | - | chr4_1:78014860-78014879 | None:intergenic | 25.0% |
| ! | AGAGAAGAAAAAGCTAATAA+GGG | - | chr4_1:78015126-78015145 | None:intergenic | 25.0% |
| ! | TAATCTTCATTTGGTAGATT+TGG | + | chr4_1:78015462-78015481 | Msa0574460:intron | 25.0% |
| ! | GTATTCAATTTACATGAACA+AGG | - | chr4_1:78015922-78015941 | None:intergenic | 25.0% |
| ! | TTCATGTAAATTGAATACGT+CGG | + | chr4_1:78015924-78015943 | Msa0574460:intron | 25.0% |
| !!! | CACTATTTTGAAAAAAGATG+AGG | + | chr4_1:78016038-78016057 | Msa0574460:CDS | 25.0% |
| !!! | AGAATTCAAAAAGTATCAAG+TGG | + | chr4_1:78016336-78016355 | Msa0574460:CDS | 25.0% |
| ! | ATATACCTGATGATTTCTTT+GGG | - | chr4_1:78016810-78016829 | None:intergenic | 25.0% |
| ! | AATGAATTTAACTCCTCTAA+AGG | + | chr4_1:78016942-78016961 | Msa0574460:intron | 25.0% |
| ! | TAAACTAAATGTTCCTTTAG+AGG | - | chr4_1:78016958-78016977 | None:intergenic | 25.0% |
| !!! | AACATTTAGTTTAGCCTTTT+AGG | + | chr4_1:78016965-78016984 | Msa0574460:intron | 25.0% |
| ! | ATCGATAGTTAATGAATCAT+CGG | + | chr4_1:78017005-78017024 | Msa0574460:intron | 25.0% |
| ! | TAGACTCAAATATCAATTGA+TGG | + | chr4_1:78017063-78017082 | Msa0574460:intron | 25.0% |
| ! | GAAAACCATGAAAAAAAACT+TGG | + | chr4_1:78017806-78017825 | Msa0574460:intron | 25.0% |
| ! | CTTAAAATCATTTGTACTGT+TGG | - | chr4_1:78018303-78018322 | None:intergenic | 25.0% |
| !! | GTATCTTGTTTCTTGTAAAT+AGG | + | chr4_1:78018419-78018438 | Msa0574460:intron | 25.0% |
| !!! | TTTTCATCTGAAACCAAAAT+TGG | - | chr4_1:78018738-78018757 | None:intergenic | 25.0% |
| ! | TAAAAACACTACTACTATAG+TGG | - | chr4_1:78018806-78018825 | None:intergenic | 25.0% |
| ! | TAGTCACTACTACTAAATAT+TGG | + | chr4_1:78018973-78018992 | Msa0574460:intron | 25.0% |
| ATGTATCTTTGTGGAAATCT+TGG | + | chr4_1:78011058-78011077 | Msa0574460:five_prime_UTR | 30.0% | |
| TGTATCTTTGTGGAAATCTT+GGG | + | chr4_1:78011059-78011078 | Msa0574460:five_prime_UTR | 30.0% | |
| ATTCCATTGAAAATGTCCTT+CGG | - | chr4_1:78011162-78011181 | None:intergenic | 30.0% | |
| GAAGAAGACTATTTAACCAT+TGG | - | chr4_1:78011346-78011365 | None:intergenic | 30.0% | |
| AAATAGTCTTCTTCCTTCAT+TGG | + | chr4_1:78011352-78011371 | Msa0574460:CDS | 30.0% | |
| !! | GAAAGTATTACCATAGTTAC+GGG | - | chr4_1:78011470-78011489 | None:intergenic | 30.0% |
| ! | AACAATACGTTGGACAATTT+TGG | + | chr4_1:78011517-78011536 | Msa0574460:intron | 30.0% |
| !!! | CAATTTTGGTTTCAGAATTC+AGG | + | chr4_1:78011531-78011550 | Msa0574460:intron | 30.0% |
| ! | TAAAACGTTTCTGAAAGCTT+TGG | + | chr4_1:78011630-78011649 | Msa0574460:CDS | 30.0% |
| GTACAAAAAAAATAGGTGCT+AGG | - | chr4_1:78011710-78011729 | None:intergenic | 30.0% | |
| !!! | ACTGTCTCTTTTGTTGTTTA+GGG | + | chr4_1:78011812-78011831 | Msa0574460:intron | 30.0% |
| ATTAAAAGACAATCCACAAC+AGG | - | chr4_1:78011848-78011867 | None:intergenic | 30.0% | |
| TGGTATATTAATGAAGCTGA+TGG | - | chr4_1:78012499-78012518 | None:intergenic | 30.0% | |
| ATCAGCTTCATTAATATACC+AGG | + | chr4_1:78012498-78012517 | Msa0574460:CDS | 30.0% | |
| !! | GTTTAATTTGAAAAACCTCG+TGG | - | chr4_1:78012537-78012556 | None:intergenic | 30.0% |
| !! | GAGGTTTTTCAAATTAAACC+TGG | + | chr4_1:78012538-78012557 | Msa0574460:CDS | 30.0% |
| AGATGTTAAGAACGATGTAA+CGG | - | chr4_1:78013035-78013054 | None:intergenic | 30.0% | |
| !!! | AAGTAATCTTTTTAAGGCTC+GGG | + | chr4_1:78013115-78013134 | Msa0574460:CDS | 30.0% |
| AATGCTAGAGGACAAAAATT+TGG | + | chr4_1:78013523-78013542 | Msa0574460:CDS | 30.0% | |
| TTCAGAATTGAAGCAAAAAC+TGG | + | chr4_1:78013550-78013569 | Msa0574460:CDS | 30.0% | |
| TTCTTCGGATTCAAAATATC+AGG | + | chr4_1:78013715-78013734 | Msa0574460:CDS | 30.0% | |
| !!! | CATTTTTAAGTGTACCTGTA+GGG | - | chr4_1:78013795-78013814 | None:intergenic | 30.0% |
| !!! | ACATTTTTAAGTGTACCTGT+AGG | - | chr4_1:78013796-78013815 | None:intergenic | 30.0% |
| TTTCATAGCATCTTGCTTAA+TGG | - | chr4_1:78013908-78013927 | None:intergenic | 30.0% | |
| ATTAAGCAAGATGCTATGAA+AGG | + | chr4_1:78013907-78013926 | Msa0574460:CDS | 30.0% | |
| TTAAGCAAGATGCTATGAAA+GGG | + | chr4_1:78013908-78013927 | Msa0574460:CDS | 30.0% | |
| ATTACACTCCTCTACATAAA+CGG | - | chr4_1:78013938-78013957 | None:intergenic | 30.0% | |
| !! | CACACATTGTTTTATGATAC+AGG | + | chr4_1:78014214-78014233 | Msa0574460:intron | 30.0% |
| ACCATTCCTAATAGACAAAA+AGG | + | chr4_1:78014264-78014283 | Msa0574460:CDS | 30.0% | |
| ! | TCCTTTTTGTCTATTAGGAA+TGG | - | chr4_1:78014268-78014287 | None:intergenic | 30.0% |
| ! | TGATGCAAAATTTTCATCTC+TGG | - | chr4_1:78014476-78014495 | None:intergenic | 30.0% |
| AAACTGTAATATCGATACAC+AGG | - | chr4_1:78014504-78014523 | None:intergenic | 30.0% | |
| ! | CATTCAACCTTTTGTAAGAT+CGG | + | chr4_1:78014609-78014628 | Msa0574460:CDS | 30.0% |
| ! | NNNNGTACCGATCTTACAAA+AGG | - | chr4_1:78014619-78014638 | None:intergenic | 30.0% |
| ! | TACCATTGTGTAAGTTTTTC+CGG | - | chr4_1:78014783-78014802 | None:intergenic | 30.0% |
| CAGAGAAGAAAAAGCTAATA+AGG | - | chr4_1:78015127-78015146 | None:intergenic | 30.0% | |
| !!! | CTTATTAGCTTTTTCTTCTC+TGG | + | chr4_1:78015125-78015144 | Msa0574460:intron | 30.0% |
| TTGACTCAATCTCAATCATA+CGG | + | chr4_1:78015176-78015195 | Msa0574460:CDS | 30.0% | |
| ATCAACTTAATGACATCTGA+AGG | - | chr4_1:78015242-78015261 | None:intergenic | 30.0% | |
| !! | TTCAGATGTCATTAAGTTGA+TGG | + | chr4_1:78015241-78015260 | Msa0574460:CDS | 30.0% |
| GGACTTAAAAATAGAGCAAT+CGG | + | chr4_1:78015269-78015288 | Msa0574460:CDS | 30.0% | |
| AAAGATTTAACCTGTGAGAA+CGG | - | chr4_1:78015322-78015341 | None:intergenic | 30.0% | |
| ATGTTCATCTGCTTAACTTT+CGG | + | chr4_1:78015667-78015686 | Msa0574460:intron | 30.0% | |
| TTTCTTAGAAATACCACTGA+CGG | - | chr4_1:78016094-78016113 | None:intergenic | 30.0% | |
| ! | AATGGAGAAACTCAGTTTTA+TGG | - | chr4_1:78016185-78016204 | None:intergenic | 30.0% |
| ! | AAGTGATTTTTCTGACATCA+AGG | + | chr4_1:78016266-78016285 | Msa0574460:CDS | 30.0% |
| ! | AACTAACAGCATATTTTCAG+AGG | + | chr4_1:78016617-78016636 | Msa0574460:intron | 30.0% |
| !! | AATTTTGATCTGTGTTTTGC+AGG | + | chr4_1:78016704-78016723 | Msa0574460:intron | 30.0% |
| TATACCTGATGATTTCTTTG+GGG | - | chr4_1:78016809-78016828 | None:intergenic | 30.0% | |
| CATATACCTGATGATTTCTT+TGG | - | chr4_1:78016811-78016830 | None:intergenic | 30.0% | |
| ATTGCATAGTCTTCACAATT+TGG | + | chr4_1:78017292-78017311 | Msa0574460:three_prime_UTR | 30.0% | |
| TACTTGAATTCTTGTCACAT+TGG | + | chr4_1:78017557-78017576 | Msa0574460:three_prime_UTR | 30.0% | |
| ! | TACAGATTCTCTTAAGCTTT+TGG | - | chr4_1:78017698-78017717 | None:intergenic | 30.0% |
| AAATGTATGAATAGTCCAAG+TGG | - | chr4_1:78017895-78017914 | None:intergenic | 30.0% | |
| GAAGTAGAAAATGAATGTGA+TGG | - | chr4_1:78018262-78018281 | None:intergenic | 30.0% | |
| ! | ACATTCATTTTCTACTTCAC+AGG | + | chr4_1:78018264-78018283 | Msa0574460:intron | 30.0% |
| GTCAACTTTCTCTTGTAAAT+AGG | - | chr4_1:78018363-78018382 | None:intergenic | 30.0% | |
| ! | TTGTTTCTTGTAAATAGGAC+CGG | + | chr4_1:78018424-78018443 | Msa0574460:intron | 30.0% |
| AGTAGTAGTGACTAAATTGA+TGG | - | chr4_1:78018967-78018986 | None:intergenic | 30.0% | |
| TGTGCATAGTGTTGTCAAAT+AGG | + | chr4_1:78010902-78010921 | Msa0574460:five_prime_UTR | 35.0% | |
| GTGCATAGTGTTGTCAAATA+GGG | + | chr4_1:78010903-78010922 | Msa0574460:five_prime_UTR | 35.0% | |
| !! | TCAGGCTTTGAAAAGTTCTT+TGG | + | chr4_1:78011005-78011024 | Msa0574460:five_prime_UTR | 35.0% |
| !! | CAGGCTTTGAAAAGTTCTTT+GGG | + | chr4_1:78011006-78011025 | Msa0574460:five_prime_UTR | 35.0% |
| TTTGGGTGATATGACACAAA+GGG | + | chr4_1:78011023-78011042 | Msa0574460:five_prime_UTR | 35.0% | |
| TTCATTACTAGGTTCCTAGT+GGG | - | chr4_1:78011093-78011112 | None:intergenic | 35.0% | |
| ATTCATTACTAGGTTCCTAG+TGG | - | chr4_1:78011094-78011113 | None:intergenic | 35.0% | |
| TGTAGTAAACAGTCAATGTG+AGG | + | chr4_1:78011197-78011216 | Msa0574460:CDS | 35.0% | |
| ! | AGCTAAACATCGATCAGTTT+TGG | + | chr4_1:78011319-78011338 | Msa0574460:intron | 35.0% |
| TTTGTTGAGAAGTCCAATGA+AGG | - | chr4_1:78011368-78011387 | None:intergenic | 35.0% | |
| TTCTCAACAAATGTCACAGA+TGG | + | chr4_1:78011377-78011396 | Msa0574460:CDS | 35.0% | |
| !! | GTCGTAGTTTGTTTAGTATC+TGG | - | chr4_1:78011442-78011461 | None:intergenic | 35.0% |
| ATACTAAACAAACTACGACC+TGG | + | chr4_1:78011443-78011462 | Msa0574460:CDS | 35.0% | |
| TTCAGGTATACCTTTCAATC+TGG | + | chr4_1:78011548-78011567 | Msa0574460:intron | 35.0% | |
| AGGTCTGATATTTCAAACCT+TGG | - | chr4_1:78011670-78011689 | None:intergenic | 35.0% | |
| TGAAATATCAGACCTAGAGA+AGG | + | chr4_1:78011675-78011694 | Msa0574460:CDS | 35.0% | |
| AGGTATCTTATACCTTCTCT+AGG | - | chr4_1:78011690-78011709 | None:intergenic | 35.0% | |
| CTAAACAACAAAAGAGACAG+TGG | - | chr4_1:78011813-78011832 | None:intergenic | 35.0% | |
| !!! | CACTGTCTCTTTTGTTGTTT+AGG | + | chr4_1:78011811-78011830 | Msa0574460:intron | 35.0% |
| !! | TATGAGTTTTAGCCCTTCTA+TGG | + | chr4_1:78012030-78012049 | Msa0574460:CDS | 35.0% |
| ACAAGCATATGCAGAAAGAA+GGG | - | chr4_1:78012088-78012107 | None:intergenic | 35.0% | |
| AACAAGCATATGCAGAAAGA+AGG | - | chr4_1:78012089-78012108 | None:intergenic | 35.0% | |
| !! | GCATATGCTTGTTGTACATA+AGG | + | chr4_1:78012096-78012115 | Msa0574460:intron | 35.0% |
| TGTCACCGTGTTTATGAAAT+TGG | - | chr4_1:78012134-78012153 | None:intergenic | 35.0% | |
| ATTCCCTAAGCAATGTTATC+TGG | + | chr4_1:78012193-78012212 | Msa0574460:intron | 35.0% | |
| TTCCCTAAGCAATGTTATCT+GGG | + | chr4_1:78012194-78012213 | Msa0574460:intron | 35.0% | |
| TTCCCAGATAACATTGCTTA+GGG | - | chr4_1:78012199-78012218 | None:intergenic | 35.0% | |
| ! | ATCCTTCTTTAGAAGAAGAG+AGG | + | chr4_1:78012330-78012349 | Msa0574460:intron | 35.0% |
| ! | TTCCTCTCTTCTTCTAAAGA+AGG | - | chr4_1:78012335-78012354 | None:intergenic | 35.0% |
| ! | TCTTTAGAAGAAGAGAGGAA+CGG | + | chr4_1:78012335-78012354 | Msa0574460:intron | 35.0% |
| !! | TGGTTATTTTCCCTTTGTGA+AGG | + | chr4_1:78012361-78012380 | Msa0574460:intron | 35.0% |
| CTACAAATGTCCTTCACAAA+GGG | - | chr4_1:78012374-78012393 | None:intergenic | 35.0% | |
| ACTACAAATGTCCTTCACAA+AGG | - | chr4_1:78012375-78012394 | None:intergenic | 35.0% | |
| GCTTCATTAATATACCAGGT+TGG | + | chr4_1:78012502-78012521 | Msa0574460:CDS | 35.0% | |
| !! | ATTTCTGATATTTTTGCGGC+AGG | - | chr4_1:78012580-78012599 | None:intergenic | 35.0% |
| ! | TGTATCTAAAGGTTGACTTC+AGG | - | chr4_1:78012632-78012651 | None:intergenic | 35.0% |
| ! | TCGCTATTAAGTGTTGTCAA+TGG | + | chr4_1:78012767-78012786 | Msa0574460:CDS | 35.0% |
| !! | ATTTTTGTTTGTTTAGCGGG+TGG | + | chr4_1:78012932-78012951 | Msa0574460:intron | 35.0% |
| ATAGACAGGGATAATACAAG+AGG | + | chr4_1:78013397-78013416 | Msa0574460:intron | 35.0% | |
| ATGTTCCGACTCTTCAATAT+AGG | + | chr4_1:78013439-78013458 | Msa0574460:intron | 35.0% | |
| CTCATCCTATATTGAAGAGT+CGG | - | chr4_1:78013447-78013466 | None:intergenic | 35.0% | |
| CTCTTCAATATAGGATGAGA+AGG | + | chr4_1:78013448-78013467 | Msa0574460:intron | 35.0% | |
| TAAGGAGATTGAGGATTCTT+CGG | + | chr4_1:78013700-78013719 | Msa0574460:CDS | 35.0% | |
| ! | TTGTCAATTTAGTTCCCTAC+AGG | + | chr4_1:78013778-78013797 | Msa0574460:CDS | 35.0% |
| TCCAGAAACTGAAATCATTG+TGG | + | chr4_1:78013878-78013897 | Msa0574460:intron | 35.0% | |
| CCAGAAACTGAAATCATTGT+GGG | + | chr4_1:78013879-78013898 | Msa0574460:intron | 35.0% | |
| TCCCTTTCATATTCTTCTAC+TGG | + | chr4_1:78013999-78014018 | Msa0574460:intron | 35.0% | |
| CCCAGTAGAAGAATATGAAA+GGG | - | chr4_1:78014003-78014022 | None:intergenic | 35.0% | |
| CCCTTTCATATTCTTCTACT+GGG | + | chr4_1:78014000-78014019 | Msa0574460:intron | 35.0% | |
| TCCCAGTAGAAGAATATGAA+AGG | - | chr4_1:78014004-78014023 | None:intergenic | 35.0% | |
| CAAAAGGGAGAAAAAAGACA+TGG | - | chr4_1:78014168-78014187 | None:intergenic | 35.0% | |
| CAGTCTATTGTAGAAGACAT+AGG | + | chr4_1:78014292-78014311 | Msa0574460:CDS | 35.0% | |
| AGACATAGGTGAAAGTGATT+TGG | + | chr4_1:78014306-78014325 | Msa0574460:CDS | 35.0% | |
| ATGTACATCTTTCCCTTCTT+TGG | - | chr4_1:78014347-78014366 | None:intergenic | 35.0% | |
| CCATAGCCTAATCTCAAAAA+TGG | - | chr4_1:78014436-78014455 | None:intergenic | 35.0% | |
| !!! | CCATTTTTGAGATTAGGCTA+TGG | + | chr4_1:78014433-78014452 | Msa0574460:intron | 35.0% |
| CATCATTCAGAGTAGAATCA+TGG | - | chr4_1:78014568-78014587 | None:intergenic | 35.0% | |
| ! | ATTACCTTCTTTTCTCAGAC+TGG | + | chr4_1:78014870-78014889 | Msa0574460:intron | 35.0% |
| ! | TTATCACTTGTTGCTCCATT+TGG | - | chr4_1:78014897-78014916 | None:intergenic | 35.0% |
| CCTCATAGACTATGAGATTT+GGG | + | chr4_1:78014977-78014996 | Msa0574460:CDS | 35.0% | |
| ! | CTATGAGATTTGGGTTCAAA+TGG | + | chr4_1:78014986-78015005 | Msa0574460:CDS | 35.0% |
| ! | ACATCTGAAGGTGATTTTAC+GGG | - | chr4_1:78015230-78015249 | None:intergenic | 35.0% |
| ! | GACATCTGAAGGTGATTTTA+CGG | - | chr4_1:78015231-78015250 | None:intergenic | 35.0% |
| !! | GTCATTAAGTTGATGGACAT+TGG | + | chr4_1:78015248-78015267 | Msa0574460:CDS | 35.0% |
| CAAATGAAGATTACCATGCA+TGG | - | chr4_1:78015455-78015474 | None:intergenic | 35.0% | |
| CATGCATGGTAATCTTCATT+TGG | + | chr4_1:78015453-78015472 | Msa0574460:intron | 35.0% | |
| TAGATCGATCTGATGTAACT+GGG | + | chr4_1:78015500-78015519 | Msa0574460:CDS | 35.0% | |
| !! | CTGTTTCTATATGGTACATG+GGG | - | chr4_1:78015607-78015626 | None:intergenic | 35.0% |
| !! | GCTGTTTCTATATGGTACAT+GGG | - | chr4_1:78015608-78015627 | None:intergenic | 35.0% |
| !! | TGCTGTTTCTATATGGTACA+TGG | - | chr4_1:78015609-78015628 | None:intergenic | 35.0% |
| !! | GTAAGCTTGCTGTTTCTATA+TGG | - | chr4_1:78015616-78015635 | None:intergenic | 35.0% |
| !! | TGTCTTTGATTTTACTGCAC+AGG | + | chr4_1:78015734-78015753 | Msa0574460:intron | 35.0% |
| GTCAGAGTACATGAAACAAA+AGG | - | chr4_1:78015971-78015990 | None:intergenic | 35.0% | |
| AAAAAGATGAGGAGATTGAG+AGG | + | chr4_1:78016049-78016068 | Msa0574460:CDS | 35.0% | |
| !!! | AGTTTTAAGCACCTTGTTGA+AGG | + | chr4_1:78016135-78016154 | Msa0574460:intron | 35.0% |
| GTTTGATATCACCTTCAACA+AGG | - | chr4_1:78016149-78016168 | None:intergenic | 35.0% | |
| AGGTGATATCAAACAACGAA+TGG | + | chr4_1:78016155-78016174 | Msa0574460:intron | 35.0% | |
| !!! | AGTTTTAAGCACCTTGTTGA+AGG | + | chr4_1:78016135-78016154 | Msa0574460:intron | 35.0% |
| GTTTGATATCACCTTCAACA+AGG | - | chr4_1:78016149-78016168 | None:intergenic | 35.0% | |
| AGGTGATATCAAACAACGAA+TGG | + | chr4_1:78016155-78016174 | Msa0574460:intron | 35.0% | |
| ! | AACGGAGAAACTCAGTTTTA+TGG | - | chr4_1:78016410-78016429 | None:intergenic | 35.0% |
| !! | CGACTTATCTGAAGTCTTTT+TGG | - | chr4_1:78016574-78016593 | None:intergenic | 35.0% |
| ATTATCCAGAACTGTTCAAG+CGG | + | chr4_1:78016735-78016754 | Msa0574460:CDS | 35.0% | |
| ATACCTGATGATTTCTTTGG+GGG | - | chr4_1:78016808-78016827 | None:intergenic | 35.0% | |
| ACCATAAAAAGCCCTAGTAT+TGG | + | chr4_1:78017207-78017226 | Msa0574460:CDS | 35.0% | |
| ! | TCCAATACTAGGGCTTTTTA+TGG | - | chr4_1:78017211-78017230 | None:intergenic | 35.0% |
| CTTTAGGTGTTCCAATACTA+GGG | - | chr4_1:78017221-78017240 | None:intergenic | 35.0% | |
| ! | CTATTTTATTGCCACCGTTT+TGG | - | chr4_1:78017246-78017265 | None:intergenic | 35.0% |
| CAAAACGGTGGCAATAAAAT+AGG | + | chr4_1:78017244-78017263 | Msa0574460:exon | 35.0% | |
| ATTTGAAGATATGTTGGTGC+AGG | + | chr4_1:78017411-78017430 | Msa0574460:three_prime_UTR | 35.0% | |
| ! | TTCTTTTGCCATATACCACT+TGG | + | chr4_1:78017877-78017896 | Msa0574460:intron | 35.0% |
| TGAATAGTCCAAGTGGTATA+TGG | - | chr4_1:78017888-78017907 | None:intergenic | 35.0% | |
| ! | TTTTGCAGAGGTAATAAGTG+TGG | - | chr4_1:78018199-78018218 | None:intergenic | 35.0% |
| ! | ATGTCTTCTAACTTTTGCAG+AGG | - | chr4_1:78018211-78018230 | None:intergenic | 35.0% |
| CTTTCTCTTGTAAATAGGAC+CGG | - | chr4_1:78018358-78018377 | None:intergenic | 35.0% | |
| ! | TCAGTCTTAACTAGTCTACA+AGG | + | chr4_1:78018646-78018665 | Msa0574460:intron | 35.0% |
| ! | TGCAATGTGAACTCCAATTT+TGG | + | chr4_1:78018722-78018741 | Msa0574460:intron | 35.0% |
| TATTACAGTCTGCATACATG+TGG | + | chr4_1:78018824-78018843 | Msa0574460:intron | 35.0% | |
| ATTACAGTCTGCATACATGT+GGG | + | chr4_1:78018825-78018844 | Msa0574460:intron | 35.0% | |
| CTTTGGGTGATATGACACAA+AGG | + | chr4_1:78011022-78011041 | Msa0574460:five_prime_UTR | 40.0% | |
| CAGATGGGGAATTCATTACT+AGG | - | chr4_1:78011104-78011123 | None:intergenic | 40.0% | |
| CTAGTAATGAATTCCCCATC+TGG | + | chr4_1:78011102-78011121 | Msa0574460:exon | 40.0% | |
| TGTAGTCTTTATGCCAGATG+GGG | - | chr4_1:78011118-78011137 | None:intergenic | 40.0% | |
| CTGTAGTCTTTATGCCAGAT+GGG | - | chr4_1:78011119-78011138 | None:intergenic | 40.0% | |
| ACTGTAGTCTTTATGCCAGA+TGG | - | chr4_1:78011120-78011139 | None:intergenic | 40.0% | |
| ACTACAGTACCCAGAGAATT+GGG | + | chr4_1:78011132-78011151 | Msa0574460:CDS | 40.0% | |
| ! | AGTCCGAAGGACATTTTCAA+TGG | + | chr4_1:78011156-78011175 | Msa0574460:CDS | 40.0% |
| AGTAAACAGTCAATGTGAGG+TGG | + | chr4_1:78011200-78011219 | Msa0574460:CDS | 40.0% | |
| !! | ATCGATCAGTTTTGGTCCAA+TGG | + | chr4_1:78011327-78011346 | Msa0574460:CDS | 40.0% |
| !! | ACGTTTCTGAAAGCTTTGGA+TGG | + | chr4_1:78011634-78011653 | Msa0574460:CDS | 40.0% |
| !! | TCTGAAAGCTTTGGATGGAT+TGG | + | chr4_1:78011639-78011658 | Msa0574460:CDS | 40.0% |
| !! | CTGAAAGCTTTGGATGGATT+GGG | + | chr4_1:78011640-78011659 | Msa0574460:CDS | 40.0% |
| TTTCATTCTTCCCCACCATT+TGG | + | chr4_1:78011962-78011981 | Msa0574460:CDS | 40.0% | |
| CAAGCATATGCAGAAAGAAG+GGG | - | chr4_1:78012087-78012106 | None:intergenic | 40.0% | |
| CTTCCCAGATAACATTGCTT+AGG | - | chr4_1:78012200-78012219 | None:intergenic | 40.0% | |
| GACAACACTTAATAGCGACT+GGG | - | chr4_1:78012765-78012784 | None:intergenic | 40.0% | |
| TGACAACACTTAATAGCGAC+TGG | - | chr4_1:78012766-78012785 | None:intergenic | 40.0% | |
| ACGGAGAAATACCTCATGTA+TGG | + | chr4_1:78012819-78012838 | Msa0574460:intron | 40.0% | |
| TCATTTGCAAGCCATACATG+AGG | - | chr4_1:78012833-78012852 | None:intergenic | 40.0% | |
| ! | GTATGGATTACTTGAGCTTG+AGG | - | chr4_1:78012890-78012909 | None:intergenic | 40.0% |
| CTTGTTGAGAAAGGTTTCAC+AGG | + | chr4_1:78012959-78012978 | Msa0574460:CDS | 40.0% | |
| CAGTGTAAGAAAGTGACATG+AGG | - | chr4_1:78013086-78013105 | None:intergenic | 40.0% | |
| !! | GTCAAGAATAAGAGTACTCG+AGG | + | chr4_1:78013151-78013170 | Msa0574460:CDS | 40.0% |
| TGGAACTAAAGAAGAGAGTG+AGG | + | chr4_1:78013184-78013203 | Msa0574460:CDS | 40.0% | |
| TTACCTTCAACTGTTGAAGC+TGG | - | chr4_1:78013335-78013354 | None:intergenic | 40.0% | |
| ! | TAGGTTGACGAAAATGCTAG+AGG | + | chr4_1:78013511-78013530 | Msa0574460:CDS | 40.0% |
| ACAGTTGGAAGAAGAAACCA+GGG | + | chr4_1:78013607-78013626 | Msa0574460:CDS | 40.0% | |
| AGAACTGAGGAATGCAGTTA+AGG | + | chr4_1:78013682-78013701 | Msa0574460:CDS | 40.0% | |
| GAATGCAGTTAAGGAGATTG+AGG | + | chr4_1:78013691-78013710 | Msa0574460:CDS | 40.0% | |
| CGGATTCAAAATATCAGGAG+TGG | + | chr4_1:78013720-78013739 | Msa0574460:CDS | 40.0% | |
| CCCACAATGATTTCAGTTTC+TGG | - | chr4_1:78013882-78013901 | None:intergenic | 40.0% | |
| AGGGAAAACCGTTTATGTAG+AGG | + | chr4_1:78013927-78013946 | Msa0574460:CDS | 40.0% | |
| !! | TTCTGAGATGCATGTATGAG+TGG | - | chr4_1:78014076-78014095 | None:intergenic | 40.0% |
| !! | AGGTGAAAGTGATTTGGTTG+TGG | + | chr4_1:78014312-78014331 | Msa0574460:CDS | 40.0% |
| TGGTAAATCCCTCCAAAGAA+GGG | + | chr4_1:78014332-78014351 | Msa0574460:CDS | 40.0% | |
| ACATCTTTCCCTTCTTTGGA+GGG | - | chr4_1:78014343-78014362 | None:intergenic | 40.0% | |
| TACATCTTTCCCTTCTTTGG+AGG | - | chr4_1:78014344-78014363 | None:intergenic | 40.0% | |
| TTCTACTCTGAATGATGCAC+AGG | + | chr4_1:78014571-78014590 | Msa0574460:intron | 40.0% | |
| ATATTCGCTTATGGCCAAAC+CGG | + | chr4_1:78014755-78014774 | Msa0574460:intron | 40.0% | |
| GTCCGGAAAAACTTACACAA+TGG | + | chr4_1:78014778-78014797 | Msa0574460:intron | 40.0% | |
| !! | TTTTCTCAGACTGGTCCAAA+TGG | + | chr4_1:78014879-78014898 | Msa0574460:intron | 40.0% |
| GGAGCAACAAGTGATAAACT+CGG | + | chr4_1:78014900-78014919 | Msa0574460:CDS | 40.0% | |
| ! | TGCTTGTGGAAATTCTGAAG+AGG | - | chr4_1:78014950-78014969 | None:intergenic | 40.0% |
| TTCAGAATTTCCACAAGCAG+AGG | + | chr4_1:78014951-78014970 | Msa0574460:CDS | 40.0% | |
| GCCTCATAGACTATGAGATT+TGG | + | chr4_1:78014976-78014995 | Msa0574460:CDS | 40.0% | |
| CCCAAATCTCATAGTCTATG+AGG | - | chr4_1:78014980-78014999 | None:intergenic | 40.0% | |
| !! | TCGTGACTTGTTATCAACTG+AGG | + | chr4_1:78015031-78015050 | Msa0574460:intron | 40.0% |
| !! | TTCCTTGATTTGCACACACT+TGG | + | chr4_1:78015149-78015168 | Msa0574460:CDS | 40.0% |
| !! | TCCTTGATTTGCACACACTT+GGG | + | chr4_1:78015150-78015169 | Msa0574460:CDS | 40.0% |
| ! | CATCTGAAGGTGATTTTACG+GGG | - | chr4_1:78015229-78015248 | None:intergenic | 40.0% |
| TAAACATTACGTGCACAGTG+TGG | + | chr4_1:78015387-78015406 | Msa0574460:intron | 40.0% | |
| TGGTCTCAATTCATGTTCGT+GGG | + | chr4_1:78015407-78015426 | Msa0574460:CDS | 40.0% | |
| CTTCATTTGGTAGATTTGGC+CGG | + | chr4_1:78015466-78015485 | Msa0574460:intron | 40.0% | |
| TCGATCTACTCTTTCACTTC+CGG | - | chr4_1:78015488-78015507 | None:intergenic | 40.0% | |
| GTAGATCGATCTGATGTAAC+TGG | + | chr4_1:78015499-78015518 | Msa0574460:CDS | 40.0% | |
| AGATCGATCTGATGTAACTG+GGG | + | chr4_1:78015501-78015520 | Msa0574460:CDS | 40.0% | |
| TGTAACTGGGGATAGACTTA+AGG | + | chr4_1:78015513-78015532 | Msa0574460:CDS | 40.0% | |
| !! | ATGGGGACTCTTTTGAGAAA+GGG | - | chr4_1:78015590-78015609 | None:intergenic | 40.0% |
| !! | CTTTGATTTTACTGCACAGG+CGG | + | chr4_1:78015737-78015756 | Msa0574460:intron | 40.0% |
| AACTGACGTCTGAGTTAATC+TGG | - | chr4_1:78015787-78015806 | None:intergenic | 40.0% | |
| AGAGTTTCCTCAGTTGAACT+AGG | + | chr4_1:78015845-78015864 | Msa0574460:CDS | 40.0% | |
| CAAGGAGACGAGAGAATTAT+TGG | + | chr4_1:78015883-78015902 | Msa0574460:CDS | 40.0% | |
| GACGAGAGAATTATTGGAAC+AGG | + | chr4_1:78015889-78015908 | Msa0574460:CDS | 40.0% | |
| GTAAATTGAATACGTCGGTG+TGG | + | chr4_1:78015929-78015948 | Msa0574460:intron | 40.0% | |
| TCTGCCTTGTCTTACTTTCA+AGG | + | chr4_1:78015999-78016018 | Msa0574460:intron | 40.0% | |
| GTCACCTTGAAAGTAAGACA+AGG | - | chr4_1:78016006-78016025 | None:intergenic | 40.0% | |
| TTTCTGACATCAAGGAGTCT+CGG | + | chr4_1:78016274-78016293 | Msa0574460:CDS | 40.0% | |
| TCTCTTAGAAATACCACCGA+CGG | - | chr4_1:78016319-78016338 | None:intergenic | 40.0% | |
| ! | GACAACAATAGTCTTGCTCT+CGG | + | chr4_1:78016504-78016523 | Msa0574460:CDS | 40.0% |
| !!! | CTTTTTGGCTTCACTCATAC+TGG | - | chr4_1:78016559-78016578 | None:intergenic | 40.0% |
| GTTCAAGCGGTAAGGAAATT+TGG | + | chr4_1:78016748-78016767 | Msa0574460:CDS | 40.0% | |
| TTTGCTACAGATGTGGTAGA+TGG | - | chr4_1:78016781-78016800 | None:intergenic | 40.0% | |
| ATCTACCACATCTGTAGCAA+AGG | + | chr4_1:78016780-78016799 | Msa0574460:CDS | 40.0% | |
| TACCTGATGATTTCTTTGGG+GGG | - | chr4_1:78016807-78016826 | None:intergenic | 40.0% | |
| ! | GCTTTAGGTGTTCCAATACT+AGG | - | chr4_1:78017222-78017241 | None:intergenic | 40.0% |
| GAACACCTAAAGCTCCAAAA+CGG | + | chr4_1:78017229-78017248 | Msa0574460:CDS | 40.0% | |
| AACGGTGGCAATAAAATAGG+AGG | + | chr4_1:78017247-78017266 | Msa0574460:exon | 40.0% | |
| TGGCACGTGCTATGTAAATA+CGG | + | chr4_1:78017312-78017331 | Msa0574460:three_prime_UTR | 40.0% | |
| !! | GTCACATTGGTGACATTTTG+TGG | + | chr4_1:78017570-78017589 | Msa0574460:three_prime_UTR | 40.0% |
| AACAAATCGATGTGCTGAAC+TGG | + | chr4_1:78017661-78017680 | Msa0574460:intron | 40.0% | |
| ! | ATTTTGTCTTGTACTCCCTC+CGG | + | chr4_1:78018336-78018355 | Msa0574460:intron | 40.0% |
| TTTCTTGTAAATAGGACCGG+AGG | + | chr4_1:78018427-78018446 | Msa0574460:intron | 40.0% | |
| TTCTTGTAAATAGGACCGGA+GGG | + | chr4_1:78018428-78018447 | Msa0574460:intron | 40.0% | |
| CTAGACTAGTAAACACGTGT+AGG | + | chr4_1:78018460-78018479 | Msa0574460:intron | 40.0% | |
| CTTCTTTACACAAGCCAGAA+AGG | - | chr4_1:78018508-78018527 | None:intergenic | 40.0% | |
| CTACTATAGTGGTTGCTTCT+TGG | - | chr4_1:78018795-78018814 | None:intergenic | 40.0% | |
| ! | TGCACAGAACAATGTCGACT+AGG | - | chr4_1:78010888-78010907 | None:intergenic | 45.0% |
| GACTACAGTACCCAGAGAAT+TGG | + | chr4_1:78011131-78011150 | Msa0574460:CDS | 45.0% | |
| TTCGGACTACCCAATTCTCT+GGG | - | chr4_1:78011144-78011163 | None:intergenic | 45.0% | |
| AACAGTCAATGTGAGGTGGA+AGG | + | chr4_1:78011204-78011223 | Msa0574460:CDS | 45.0% | |
| TCAATGTGAGGTGGAAGGTA+TGG | + | chr4_1:78011209-78011228 | Msa0574460:intron | 45.0% | |
| ! | GTGGAAGGTATGGTGATCAT+TGG | + | chr4_1:78011219-78011238 | Msa0574460:intron | 45.0% |
| ! | TTAAGAGCATGCTTGAGCAG+TGG | + | chr4_1:78011404-78011423 | Msa0574460:CDS | 45.0% |
| ATTACCATAGTTACGGGACC+AGG | - | chr4_1:78011464-78011483 | None:intergenic | 45.0% | |
| CTTATTGCACGCTCCTTGAT+GGG | + | chr4_1:78011784-78011803 | Msa0574460:intron | 45.0% | |
| TGTTGTCCACACCAAATGGT+GGG | - | chr4_1:78011976-78011995 | None:intergenic | 45.0% | |
| TTCCTGTTGTCCACACCAAA+TGG | - | chr4_1:78011980-78011999 | None:intergenic | 45.0% | |
| GGAAGCTTACATCTGAGTCA+AGG | + | chr4_1:78011996-78012015 | Msa0574460:CDS | 45.0% | |
| !! | GAGTTTTAGCCCTTCTATGG+CGG | + | chr4_1:78012033-78012052 | Msa0574460:CDS | 45.0% |
| !! | AGTTTTAGCCCTTCTATGGC+GGG | + | chr4_1:78012034-78012053 | Msa0574460:CDS | 45.0% |
| GGAAGATCTGAATAGCTTCC+AGG | - | chr4_1:78012559-78012578 | None:intergenic | 45.0% | |
| ACACTTAATAGCGACTGGGT+GGG | - | chr4_1:78012761-78012780 | None:intergenic | 45.0% | |
| AACACTTAATAGCGACTGGG+TGG | - | chr4_1:78012762-78012781 | None:intergenic | 45.0% | |
| !! | GAAAGCGTCGAGAGAAGAAA+CGG | + | chr4_1:78012800-78012819 | Msa0574460:CDS | 45.0% |
| TGAGGTGCAAGTCATTCACA+TGG | - | chr4_1:78012872-78012891 | None:intergenic | 45.0% | |
| ! | GTTCTGCTTGTGTCGATATG+CGG | - | chr4_1:78012995-78013014 | None:intergenic | 45.0% |
| TAGCCAGCTTCAACAGTTGA+AGG | + | chr4_1:78013329-78013348 | Msa0574460:intron | 45.0% | |
| ATAGGATGAGAAGGTCACAG+AGG | + | chr4_1:78013457-78013476 | Msa0574460:intron | 45.0% | |
| GGTCACAGAGGAAGAAAAGA+AGG | + | chr4_1:78013469-78013488 | Msa0574460:CDS | 45.0% | |
| TGAAGCGAAATGCTCACAGT+TGG | + | chr4_1:78013592-78013611 | Msa0574460:CDS | 45.0% | |
| CACAGTTGGAAGAAGAAACC+AGG | + | chr4_1:78013606-78013625 | Msa0574460:CDS | 45.0% | |
| CAATTCTGCTTTAGCATCCC+TGG | - | chr4_1:78013627-78013646 | None:intergenic | 45.0% | |
| !! | AGTATCGACTCGAAGAACTG+AGG | + | chr4_1:78013669-78013688 | Msa0574460:CDS | 45.0% |
| GTGGTAAATCCCTCCAAAGA+AGG | + | chr4_1:78014331-78014350 | Msa0574460:CDS | 45.0% | |
| ! | ATAAACCTTGAGTTGCGGCA+GGG | - | chr4_1:78014399-78014418 | None:intergenic | 45.0% |
| ! | AATAAACCTTGAGTTGCGGC+AGG | - | chr4_1:78014400-78014419 | None:intergenic | 45.0% |
| TATTCGCTTATGGCCAAACC+GGG | + | chr4_1:78014756-78014775 | Msa0574460:intron | 45.0% | |
| ! | TGTGTAAGTTTTTCCGGACC+CGG | - | chr4_1:78014777-78014796 | None:intergenic | 45.0% |
| TGGACCAGTCTGAGAAAAGA+AGG | - | chr4_1:78014877-78014896 | None:intergenic | 45.0% | |
| TCCCAAGTGTGTGCAAATCA+AGG | - | chr4_1:78015154-78015173 | None:intergenic | 45.0% | |
| AAAGAAGTAGCCGTTCTCAC+AGG | + | chr4_1:78015309-78015328 | Msa0574460:CDS | 45.0% | |
| GTGGTCTCAATTCATGTTCG+TGG | + | chr4_1:78015406-78015425 | Msa0574460:CDS | 45.0% | |
| CTCAATTCATGTTCGTGGGA+AGG | + | chr4_1:78015411-78015430 | Msa0574460:CDS | 45.0% | |
| !! | AAGTCTGGTTCTACCATGCA+TGG | + | chr4_1:78015439-78015458 | Msa0574460:CDS | 45.0% |
| AACAAATCGCTTTCTGCCCT+CGG | + | chr4_1:78015550-78015569 | Msa0574460:CDS | 45.0% | |
| GGCAAAGATTACATCTCCGA+GGG | - | chr4_1:78015569-78015588 | None:intergenic | 45.0% | |
| !! | CATGGGGACTCTTTTGAGAA+AGG | - | chr4_1:78015591-78015610 | None:intergenic | 45.0% |
| CAACTTCTGCAAACGTCTCT+TGG | + | chr4_1:78015637-78015656 | Msa0574460:CDS | 45.0% | |
| AATACGTCGGTGTGGTTATG+CGG | + | chr4_1:78015937-78015956 | Msa0574460:intron | 45.0% | |
| CTTAGAAATACCACTGACGG+AGG | - | chr4_1:78016091-78016110 | None:intergenic | 45.0% | |
| GTTTCTCCATTCGCCTGAAA+AGG | + | chr4_1:78016194-78016213 | Msa0574460:CDS | 45.0% | |
| !! | GTTACTCGTCTAGCCTTTTC+AGG | - | chr4_1:78016210-78016229 | None:intergenic | 45.0% |
| AAGGCTAGACGAGTAACTCA+AGG | + | chr4_1:78016213-78016232 | Msa0574460:CDS | 45.0% | |
| CAGATGTGGTAGATGGCATT+CGG | - | chr4_1:78016774-78016793 | None:intergenic | 45.0% | |
| AATAGCATGACCTCTGAGCA+AGG | - | chr4_1:78016877-78016896 | None:intergenic | 45.0% | |
| !! | CTCGGCAATCGATTTGAGAT+CGG | - | chr4_1:78017454-78017473 | None:intergenic | 45.0% |
| ! | GGAGGGAGTACAAGACAAAA+TGG | - | chr4_1:78018337-78018356 | None:intergenic | 45.0% |
| CTCTTGTAAATAGGACCGGA+GGG | - | chr4_1:78018354-78018373 | None:intergenic | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | - | chr4_1:78018355-78018374 | None:intergenic | 45.0% | |
| TCTTGTAAATAGGACCGGAG+GGG | + | chr4_1:78018429-78018448 | Msa0574460:intron | 45.0% | |
| CACGTGTAGGCAATCTTGTA+CGG | + | chr4_1:78018473-78018492 | Msa0574460:intron | 45.0% | |
| TGTAGGCAATCTTGTACGGA+AGG | + | chr4_1:78018477-78018496 | Msa0574460:intron | 45.0% | |
| ! | TCTGGCTTGTGTAAAGAAGC+TGG | + | chr4_1:78018509-78018528 | Msa0574460:intron | 45.0% |
| ! | CTGGCTTGTGTAAAGAAGCT+GGG | + | chr4_1:78018510-78018529 | Msa0574460:intron | 45.0% |
| ! | TGGCTTGTGTAAAGAAGCTG+GGG | + | chr4_1:78018511-78018530 | Msa0574460:intron | 45.0% |
| CATCGTTGAAGTTACTACGC+CGG | + | chr4_1:78018765-78018784 | Msa0574460:intron | 45.0% | |
| !!! | ATTTTTTTTTTAATTCAATT+GGG | + | chr4_1:78018028-78018047 | Msa0574460:intron | 5.0% |
| CTTCGGACTACCCAATTCTC+TGG | - | chr4_1:78011145-78011164 | None:intergenic | 50.0% | |
| CAGAGAATTGGGTAGTCCGA+AGG | + | chr4_1:78011143-78011162 | Msa0574460:CDS | 50.0% | |
| !! | TGGATGGATTGGGATTGCCA+AGG | + | chr4_1:78011650-78011669 | Msa0574460:CDS | 50.0% |
| GCTTATTGCACGCTCCTTGA+TGG | + | chr4_1:78011783-78011802 | Msa0574460:intron | 50.0% | |
| GGGATCTATGAAGCCTGTTG+TGG | + | chr4_1:78011832-78011851 | Msa0574460:intron | 50.0% | |
| TCGAAGATCCATACCCACGA+GGG | - | chr4_1:78011940-78011959 | None:intergenic | 50.0% | |
| ! | TTCTTCCCCACCATTTGGTG+TGG | + | chr4_1:78011967-78011986 | Msa0574460:CDS | 50.0% |
| GTTGTCCACACCAAATGGTG+GGG | - | chr4_1:78011975-78011994 | None:intergenic | 50.0% | |
| CTGTTGTCCACACCAAATGG+TGG | - | chr4_1:78011977-78011996 | None:intergenic | 50.0% | |
| !! | CACCATTTGGTGTGGACAAC+AGG | + | chr4_1:78011975-78011994 | Msa0574460:CDS | 50.0% |
| GAAGAAGAGAGGAACGGAAG+TGG | + | chr4_1:78012341-78012360 | Msa0574460:intron | 50.0% | |
| CGTGGAACTTATGACCAACC+TGG | - | chr4_1:78012519-78012538 | None:intergenic | 50.0% | |
| ! | GGTTGGTCATAAGTTCCACG+AGG | + | chr4_1:78012519-78012538 | Msa0574460:CDS | 50.0% |
| !! | TGGGAGCATTCTGCAACAAC+AGG | - | chr4_1:78012742-78012761 | None:intergenic | 50.0% |
| ! | GGTGGCATGCTTGTTGAGAA+AGG | + | chr4_1:78012950-78012969 | Msa0574460:CDS | 50.0% |
| ! | AAGTTTTTCCGGACCCGGTT+TGG | - | chr4_1:78014772-78014791 | None:intergenic | 50.0% |
| TATGAGGCTTCCTCTGCTTG+TGG | - | chr4_1:78014964-78014983 | None:intergenic | 50.0% | |
| ! | CGTGGGAAGGATTTCAAGTC+TGG | + | chr4_1:78015424-78015443 | Msa0574460:CDS | 50.0% |
| GGGCAAAGATTACATCTCCG+AGG | - | chr4_1:78015570-78015589 | None:intergenic | 50.0% | |
| !! | GTCTAGCCTTTTCAGGCGAA+TGG | - | chr4_1:78016203-78016222 | None:intergenic | 50.0% |
| GTTTCTCCGTTCGCCTGAAA+AGG | + | chr4_1:78016419-78016438 | Msa0574460:CDS | 50.0% | |
| !! | GTTACTCGCCTAGCCTTTTC+AGG | - | chr4_1:78016435-78016454 | None:intergenic | 50.0% |
| AAGGCTAGGCGAGTAACTCA+AGG | + | chr4_1:78016438-78016457 | Msa0574460:CDS | 50.0% | |
| CCTTACCGCTTGAACAGTTC+TGG | - | chr4_1:78016743-78016762 | None:intergenic | 50.0% | |
| CCAGAACTGTTCAAGCGGTA+AGG | + | chr4_1:78016740-78016759 | Msa0574460:CDS | 50.0% | |
| GACCCCCCAAAGAAATCATC+AGG | + | chr4_1:78016802-78016821 | Msa0574460:CDS | 50.0% | |
| TGTCTGTCATCCTTGCTCAG+AGG | + | chr4_1:78016864-78016883 | Msa0574460:intron | 50.0% | |
| CACCTAAAGCTCCAAAACGG+TGG | + | chr4_1:78017232-78017251 | Msa0574460:CDS | 50.0% | |
| !!! | TGCCACCGTTTTGGAGCTTT+AGG | - | chr4_1:78017237-78017256 | None:intergenic | 50.0% |
| TGTGCTGAACTGGAAGAGCT+TGG | + | chr4_1:78017671-78017690 | Msa0574460:intron | 50.0% | |
| GTGCTGAACTGGAAGAGCTT+GGG | + | chr4_1:78017672-78017691 | Msa0574460:intron | 50.0% | |
| AGTGTGGCAGGCATATCACT+TGG | - | chr4_1:78018183-78018202 | None:intergenic | 50.0% | |
| GCAGAGGTAATAAGTGTGGC+AGG | - | chr4_1:78018195-78018214 | None:intergenic | 50.0% | |
| AGGCAATCTTGTACGGAAGG+TGG | + | chr4_1:78018480-78018499 | Msa0574460:intron | 50.0% | |
| GGCAATCTTGTACGGAAGGT+GGG | + | chr4_1:78018481-78018500 | Msa0574460:intron | 50.0% | |
| CTTGTGTAAAGAAGCTGGGG+TGG | + | chr4_1:78018514-78018533 | Msa0574460:intron | 50.0% | |
| ! | CTTGGGTTGCTTGTCCCACT+AGG | + | chr4_1:78011076-78011095 | Msa0574460:five_prime_UTR | 55.0% |
| ACGACCTGGTCCCGTAACTA+TGG | + | chr4_1:78011457-78011476 | Msa0574460:CDS | 55.0% | |
| GAGACAGTGGCAACCCATCA+AGG | - | chr4_1:78011800-78011819 | None:intergenic | 55.0% | |
| TCCAATGCATCAAGCCCTCG+TGG | + | chr4_1:78011923-78011942 | Msa0574460:CDS | 55.0% | |
| CCAATGCATCAAGCCCTCGT+GGG | + | chr4_1:78011924-78011943 | Msa0574460:CDS | 55.0% | |
| CTCGAAGATCCATACCCACG+AGG | - | chr4_1:78011941-78011960 | None:intergenic | 55.0% | |
| ! | GTACTCGAGGCACTTGCATC+TGG | + | chr4_1:78013164-78013183 | Msa0574460:CDS | 55.0% |
| ACGGGGAACATGCTAGCATC+TGG | - | chr4_1:78015212-78015231 | None:intergenic | 55.0% | |
| AAATCACTGAGCGCGTCCGT+CGG | + | chr4_1:78016300-78016319 | Msa0574460:CDS | 55.0% | |
| TCCGTTCGCCTGAAAAGGCT+AGG | + | chr4_1:78016424-78016443 | Msa0574460:CDS | 55.0% | |
| !! | GCCTAGCCTTTTCAGGCGAA+CGG | - | chr4_1:78016428-78016447 | None:intergenic | 55.0% |
| GCTCTCGGCACAGAAACTGA+TGG | + | chr4_1:78016519-78016538 | Msa0574460:CDS | 55.0% | |
| GGGGTCCTTTGCTACAGATG+TGG | - | chr4_1:78016788-78016807 | None:intergenic | 55.0% | |
| TCCACACAGCAACTGCGAGA+CGG | + | chr4_1:78017343-78017362 | Msa0574460:three_prime_UTR | 55.0% | |
| GTAAATAGGACCGGAGGGGA+AGG | + | chr4_1:78018433-78018452 | Msa0574460:intron | 55.0% | |
| GTCTAGTACTCCTTCCCCTC+CGG | - | chr4_1:78018446-78018465 | None:intergenic | 55.0% | |
| TACGGAAGGTGGGACCTTTC+TGG | + | chr4_1:78018491-78018510 | Msa0574460:intron | 55.0% | |
| GTGTAAAGAAGCTGGGGTGG+CGG | + | chr4_1:78018517-78018536 | Msa0574460:intron | 55.0% | |
| TGTAAAGAAGCTGGGGTGGC+GGG | + | chr4_1:78018518-78018537 | Msa0574460:intron | 55.0% | |
| !! | GTGGTTGCTTCTTGGCTTGC+CGG | - | chr4_1:78018787-78018806 | None:intergenic | 55.0% |
| CCCACGAGGGCTTGATGCAT+TGG | - | chr4_1:78011927-78011946 | None:intergenic | 60.0% | |
| GCATCAAGCCCTCGTGGGTA+TGG | + | chr4_1:78011929-78011948 | Msa0574460:CDS | 60.0% | |
| !! | TAGCCCTTCTATGGCGGGTC+CGG | + | chr4_1:78012039-78012058 | Msa0574460:intron | 60.0% |
| TCACCGGACCCGCCATAGAA+GGG | - | chr4_1:78012045-78012064 | None:intergenic | 60.0% | |
| TTCACCGGACCCGCCATAGA+AGG | - | chr4_1:78012046-78012065 | None:intergenic | 60.0% | |
| GCTTATGGCCAAACCGGGTC+CGG | + | chr4_1:78014761-78014780 | Msa0574460:intron | 60.0% | |
| TCACTGAACGCCTCCGTCAG+TGG | + | chr4_1:78016078-78016097 | Msa0574460:CDS | 60.0% | |
| TCCGTCTCGCAGTTGCTGTG+TGG | - | chr4_1:78017347-78017366 | None:intergenic | 60.0% | |
| TTCGGCCCTGCCGCAACTCA+AGG | + | chr4_1:78014391-78014410 | Msa0574460:CDS | 65.0% | |
| TCACTGAGCGCGTCCGTCGG+TGG | + | chr4_1:78016303-78016322 | Msa0574460:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 78010869 | 78019099 | 78010869 | ID=Msa0574460;Name=Msa0574460 |
| chr4_1 | mRNA | 78010869 | 78019099 | 78010869 | ID=Msa0574460-mRNA-1;Parent=Msa0574460;Name=Msa0574460-mRNA-1;_AED=0.13;_eAED=0.13;_QI=239|0.73|0.62|1|0.73|0.66|24|400|1051 |
| chr4_1 | exon | 78010869 | 78011225 | 78010869 | ID=Msa0574460-mRNA-1:exon:27583;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78011321 | 78011478 | 78011321 | ID=Msa0574460-mRNA-1:exon:27584;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78011586 | 78011696 | 78011586 | ID=Msa0574460-mRNA-1:exon:27585;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78011833 | 78012055 | 78011833 | ID=Msa0574460-mRNA-1:exon:27586;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78012494 | 78012621 | 78012494 | ID=Msa0574460-mRNA-1:exon:27587;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78012752 | 78012835 | 78012752 | ID=Msa0574460-mRNA-1:exon:27588;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78012948 | 78013025 | 78012948 | ID=Msa0574460-mRNA-1:exon:27589;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78013113 | 78013205 | 78013113 | ID=Msa0574460-mRNA-1:exon:27590;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78013461 | 78013799 | 78013461 | ID=Msa0574460-mRNA-1:exon:27591;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78013883 | 78013964 | 78013883 | ID=Msa0574460-mRNA-1:exon:27592;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78014059 | 78014154 | 78014059 | ID=Msa0574460-mRNA-1:exon:27593;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78014236 | 78014412 | 78014236 | ID=Msa0574460-mRNA-1:exon:27594;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78014593 | 78014630 | 78014593 | ID=Msa0574460-mRNA-1:exon:27595;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78014888 | 78015039 | 78014888 | ID=Msa0574460-mRNA-1:exon:27596;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78015133 | 78015330 | 78015133 | ID=Msa0574460-mRNA-1:exon:27597;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78015405 | 78015460 | 78015405 | ID=Msa0574460-mRNA-1:exon:27598;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78015479 | 78015658 | 78015479 | ID=Msa0574460-mRNA-1:exon:27599;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78015756 | 78015910 | 78015756 | ID=Msa0574460-mRNA-1:exon:27600;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78016021 | 78016135 | 78016021 | ID=Msa0574460-mRNA-1:exon:27601;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78016157 | 78016360 | 78016157 | ID=Msa0574460-mRNA-1:exon:27602;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78016382 | 78016598 | 78016382 | ID=Msa0574460-mRNA-1:exon:27603;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78016726 | 78016823 | 78016726 | ID=Msa0574460-mRNA-1:exon:27604;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78017205 | 78017616 | 78017205 | ID=Msa0574460-mRNA-1:exon:27605;Parent=Msa0574460-mRNA-1 |
| chr4_1 | exon | 78019056 | 78019099 | 78019056 | ID=Msa0574460-mRNA-1:exon:27606;Parent=Msa0574460-mRNA-1 |
| chr4_1 | five_prime_UTR | 78010869 | 78011107 | 78010869 | ID=Msa0574460-mRNA-1:five_prime_utr;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78011108 | 78011225 | 78011108 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78011321 | 78011478 | 78011321 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78011586 | 78011696 | 78011586 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78011833 | 78012055 | 78011833 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78012494 | 78012621 | 78012494 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78012752 | 78012835 | 78012752 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78012948 | 78013025 | 78012948 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78013113 | 78013205 | 78013113 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78013461 | 78013799 | 78013461 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78013883 | 78013964 | 78013883 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78014059 | 78014154 | 78014059 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78014236 | 78014412 | 78014236 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78014593 | 78014630 | 78014593 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78014888 | 78015039 | 78014888 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78015133 | 78015330 | 78015133 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78015405 | 78015460 | 78015405 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78015479 | 78015658 | 78015479 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78015756 | 78015910 | 78015756 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78016021 | 78016135 | 78016021 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78016157 | 78016360 | 78016157 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78016382 | 78016598 | 78016382 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78016726 | 78016823 | 78016726 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | CDS | 78017205 | 78017260 | 78017205 | ID=Msa0574460-mRNA-1:cds;Parent=Msa0574460-mRNA-1 |
| chr4_1 | three_prime_UTR | 78017261 | 78017616 | 78017261 | ID=Msa0574460-mRNA-1:three_prime_utr;Parent=Msa0574460-mRNA-1 |
| chr4_1 | three_prime_UTR | 78019056 | 78019099 | 78019056 | ID=Msa0574460-mRNA-1:three_prime_utr;Parent=Msa0574460-mRNA-1 |
| Gene Sequence |
| Protein sequence |