AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0712890


Find 573 sgRNAs with CRISPR-Local

Find 781 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr5_1 gene 4724660 4733713 4724660 ID=Msa0712890;Name=Msa0712890
chr5_1 mRNA 4724660 4733713 4724660 ID=Msa0712890-mRNA-1;Parent=Msa0712890;Name=Msa0712890-mRNA-1;_AED=0.04;_eAED=0.04;_QI=191|1|1|1|0.92|0.86|15|331|1834
chr5_1 exon 4724660 4724989 4724660 ID=Msa0712890-mRNA-1:exon:1993;Parent=Msa0712890-mRNA-1
chr5_1 exon 4725529 4725632 4725529 ID=Msa0712890-mRNA-1:exon:1992;Parent=Msa0712890-mRNA-1
chr5_1 exon 4725731 4725784 4725731 ID=Msa0712890-mRNA-1:exon:1991;Parent=Msa0712890-mRNA-1
chr5_1 exon 4725953 4726024 4725953 ID=Msa0712890-mRNA-1:exon:1990;Parent=Msa0712890-mRNA-1
chr5_1 exon 4726340 4729401 4726340 ID=Msa0712890-mRNA-1:exon:1989;Parent=Msa0712890-mRNA-1
chr5_1 exon 4729490 4729748 4729490 ID=Msa0712890-mRNA-1:exon:1988;Parent=Msa0712890-mRNA-1
chr5_1 exon 4729957 4730243 4729957 ID=Msa0712890-mRNA-1:exon:1987;Parent=Msa0712890-mRNA-1
chr5_1 exon 4730343 4730678 4730343 ID=Msa0712890-mRNA-1:exon:1986;Parent=Msa0712890-mRNA-1
chr5_1 exon 4730765 4730906 4730765 ID=Msa0712890-mRNA-1:exon:1985;Parent=Msa0712890-mRNA-1
chr5_1 exon 4730995 4731215 4730995 ID=Msa0712890-mRNA-1:exon:1984;Parent=Msa0712890-mRNA-1
chr5_1 exon 4731345 4731506 4731345 ID=Msa0712890-mRNA-1:exon:1983;Parent=Msa0712890-mRNA-1
chr5_1 exon 4731678 4731836 4731678 ID=Msa0712890-mRNA-1:exon:1982;Parent=Msa0712890-mRNA-1
chr5_1 exon 4731934 4732233 4731934 ID=Msa0712890-mRNA-1:exon:1981;Parent=Msa0712890-mRNA-1
chr5_1 exon 4733035 4733298 4733035 ID=Msa0712890-mRNA-1:exon:1980;Parent=Msa0712890-mRNA-1
chr5_1 exon 4733439 4733713 4733439 ID=Msa0712890-mRNA-1:exon:1979;Parent=Msa0712890-mRNA-1
chr5_1 five_prime_UTR 4733523 4733713 4733523 ID=Msa0712890-mRNA-1:five_prime_utr;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4733439 4733522 4733439 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4733035 4733298 4733035 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4731934 4732233 4731934 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4731678 4731836 4731678 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4731345 4731506 4731345 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4730995 4731215 4730995 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4730765 4730906 4730765 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4730343 4730678 4730343 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4729957 4730243 4729957 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4729490 4729748 4729490 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4726340 4729401 4726340 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4725953 4726024 4725953 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4725731 4725784 4725731 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 CDS 4725530 4725632 4725530 ID=Msa0712890-mRNA-1:cds;Parent=Msa0712890-mRNA-1
chr5_1 three_prime_UTR 4725529 4725529 4725529 ID=Msa0712890-mRNA-1:three_prime_utr;Parent=Msa0712890-mRNA-1
chr5_1 three_prime_UTR 4724660 4724989 4724660 ID=Msa0712890-mRNA-1:three_prime_utr;Parent=Msa0712890-mRNA-1
Gene Sequence

>Msa0712890

ATGGATATTCGGTTCCCTTTCTCTCCGGCAGAGGTCGCCAAAGTCCGTATGGTTCAGTTCGGCATACTCAGTCCTGATGAGATCAGGCAAATGGCTGTGGTGCAAATTGAGCACGGCGAAACAACGGAACGAGGAAAGCCGAAAATTGGTGGATTGAGTGATCCAAGACTCGGAACTATTGATAGGAAGATGAAGTGTGAAACCTGTACTGCCAGCATGGCTGAATGTCCCGGTCATTTTGGTTACTTGGAGCTTGCAAAGCCTATGTTTCATATAGGGTTTTTGAAGACTGTGCTGAGTATAATGCGATGTGTTTGTTTCAACTGCTCGAAAATTCTCGCTGATGAGAACGATCATAAGTTTAAGCAAGCTATGAGGATCAAGAACCCTAAACATAGATTGCGGAAGATTCTGGATGCTTGCAAAAACAAAACTAAATGCGAAGGCGGTGATGACATTGACCTTCCTGAACATGATACTAAGGAGCCGCTTAAAAAGAGTCGTGGTGGCTGTGGTGCTCAGCAACCAAAGATCACTATTGAGGGGATGAAAATGATTGCAGAGTACAAAGCTCAAAGGAAGAAAAGTGATGACCAGGAACAGCTTCCTGAACCTGTTGAAAGGAAACAGACTCTTTCCGCAGAAAGGGTTTTGGGTGTTCTGAAAAGGATAAGTGACGAGGATTGCCAGTTGTTAGGCTTGAATCCTAAGTATGCCCGTCCTGACTGGTTGATTTTACAAGTTCTCCCAATTCCTCCTCCGCCTGTGAGACCTTCAGTAATGATGGACACATCCTCCAGGAGTGAGGATGATCTAACTCATCAGCTGGCCATGATCATCAGGCACAATGAAAATCTGAAAAGACAAGAGAGGAATGGTTCTCCTGCACATATTATTTCAGAGTTTGCTCAGCTGTTGCAGTTTCATATAGCCACATATTTTGATAATGAGTTGCCTGGATTGCCAAGGGCCACTCAAAGATCGGGAAGGCCTATCAAATCAATATGCAGCCGGCTTAAAGCCAAAGAAGGCCGGATCAGAGGCAACTTGATGGGGAAAAGAGTTGATTTTTCTGCTCGAACAGTAATCACACCAGATCCAACCATCAATATTGATCAATTGGGAGTGCCATGGAGTATTGCTCTGAATCTTACATACCCTGAGACTGTGACTCCTTACAACATTGAAAGACTGAAGGAACTTGTTGAGTACGGACCCCATCCTCCACCTGGAAAAACTGGTGCCAAGTATATCATTCGTGATGATGGGCAAAGGCTTGATCTCAGATATTTGAAGAAAAGTAGCGATCACCATTTGGAGCTTGGATACAAGGTGGAGCGCCATTTGAATGATGGAGATTTTGTCCTCTTCAATCGCCAACCTAGTCTTCATAAGATGTCTATCATGGGGCACCGAATCAAAATTATGCCCTATTCTACTTTTCGGCTCAACTTGTCGGTTACCTCACCATATAATGCTGATTTTGATGGTGATGAAATGAATATGCATGTTCCTCAGTCATTTGAAACCAGAGCTGAGGTGTTGGAGCTGATGATGGTGCCTAAATGCATTGTGTCACCTCAGTCAAACAGGCCAGTAATGGGAATTGTCCAAGATTCACTTTTAGGATGCCGAAAAATTACCAAGAGAGATACATTCATTACGAAGGATGTTTTTATGAATATATTGATGTGGTGGGAAGATTTTGATGGCAAAGTTCCTGCTCCTACAATATTGAAACCAGAACCACTGTGGACTGGGAAACAAGTTTTCAATCTGATTATTCCTAAGCAGATAAATCTAATTAGATATTCTAGCTGGCACAATGAGAACGAAAGGGGACCCATAACCCCTGGAGATACCATGGTCAGAATTGAGAAGGGGGAACTACTTACTGGTACTCTTTGCAAAAAGACACTAGGAACAGGCACTGGAAGTCTCATTCATGTCATTTGGGAAGAGGTTGGCCCTGATGCGGCTCGCAAATTTCTTGGCCATACTCAGTGGCTTGTAAACTACTGGCTTTTACAGCAAGCTTTTAGCATTGGAATTGGTGATACAATTGCTGATGCGTCTACCATGGAGACTATTAATCAGACTATTTCACAGGCTAAGGATAAAGTGAAACAACTCATCCGGGAAGCTCAGGAAAAGAAATTAGAGGCTGAACCTGGTCGGACAATGATGGATTCATTTGAAAATAGAGTGAACCAGACTCTGAATAGAGCTCGTGATGATGCCGGAAATAGTGCCCAAAAAAGTTTATCCGAGAGCAATAATCTGAAAGCCATGGTCACAGCTGGTTCCAAGGGAAGTTTCATTAACATATCTCAGATGACTGCTTGTGTGGGCCAACAGAATGTTGAGGGTAAACGAATTCCATTTGGGTTCATAGACCGGACATTGCCTCACTTTACAAAAGATGATTATGGGCCTGAAAGTCGTGGGTTTGTGGAGAACTCATATCTCCGTGGACTGACCCCTCAAGAGTTCTTTTTCCATGCCATGGGTGGTAGGGAAGGTCTTATTGATACTGCTGTGAAGACTTCAGAAACTGGGTACATTCAGAGGCGGCTTGTAAAGGCTATGGAGGACATCATGGTTAAATATGACGGGACAGTTAGGAATTCTTTGGGAGATGTCATACAGTTTCTCTATGGTGAAGATGGCATGGATGCAGTTTGGATTGAAACGCAGAAGCTGGATTCACTGAAAATGAAAAAAACAGATTTTGACAGGGCTTTTAGGTATGAATTTGATGATGAAAACTGGAGGCCTACTTACATGCTTGAAGAGCCCGTAGAAGACTTAAAAACAATTAGAGAGTTCCGTAATGTGTTTGAGGCAGAAGTTCAAAAGCTTGACGCCGATAGGGTTCAACTTGCAACTGAGATAGCCACCACTGGTGACAGTTCCCTACCGCTACCTGTCAACCTTAAAAGGCTTATCTGGAATGCGCAGAAGACCTTTAAGGTTGACTTCCGAAGACCTTCTGATATGCATCCGATGGAAATTGTGGAAGCTATTGATAAGCTCCAGGAGAGACTTAGAGTAGTTCCTGGGGAGGACCTTTTAAGTCAGGAAGCTCAGAAAAATGCCACTCTCCTGTTCAATATTCTGCTTCGTAGCACCTTTGCCAGTAAAAGGGTCCTGGAGGAGTACAGGCTTTCTCGCGAGGCATTTGAGTGGGTAGTGGGAGAAATAGAATCAAGGTTCTTGCAATCACTTGTGGCCTCTGGGGAAATGATTGGTTGTGTGGCAGCACAATCAATTGGTGAACCTGCTACTCAGATGACTCTCAACACTTTCCACTACGCTGGTGTTAGTGCTAAGAACGTTACTCTTGGTGTGCCTAGGTTAAGAGAAATTATTAATGTTGCCAAGAGAATTAAGACACCTTCTCTGTCCGTGTATTTGAAACCTGAGGTTTGTAAGACTAAAGAGAGAGCCAAGAGTGTGCAGTGTGCTTTAGAATATACCACTCTCCGGAGTGTGACTCAAGCCACAGAGGTGTGGTATGATCCGGACCCAATGGGTACAATAATAGAAGAGGATGTTGATTTTGTCAAGTCTTACTATGAAATGCCCGATGAAGAAGTTGCTCTTGATAAAATCTCACCTTGGTTGCTTCGCATAGAACTGAATCGTGAAATGATGGTGGATAAGAAGTTGAGTATGGCTGACATTGCCGAGAAGATCAACCACGAATTCGATGGTGATTTGACATGCATATTTAATGATGACAATGCTGAAAAACTTATACTTCGAATCCGTATTATGAATGATGAAGCGCCCAAGGGAGACATTCAAGATGAATCTGCTGAAGATGATGTTTTCTTGAAGAAAATAGAAAGCAACATGCTGACTGAAATGACCTTGCGAGGTATTCCAGATATCAACAAAGTTTTCATAAAAAATACGAAAATTCAGAAGTTTGACGAAAATGAAGGTTTTAAGCCTCACGAGGAATGGATGCTTGATACCGAAGGTGTCAACCTTTTAGCTGTAATGTGCCATGAAGATGTTGATGCAAAAAGGACCACAAGCAACCACTTGATTGAAGTTATTGAAGTTCTGGGTATTGAGGCAGTTCGGCGGTCTCTGCTGGATGAATTGCGTGTTGTCATTTCATTTGATGGGTCTTATGTCAATTACAGACACCTGGCTATTCTTTGTGATACCATGACTTATCGGGGACATTTGATGGCAATTACACGTCATGGTATCAACAGGAATGAAACTGGCCCAATGATGAGGTGCTCATTTGAAGAGACTGTTGATATTCTCCTGGATGCTGCGGTATATGCTGAGACTGATCACTTGAGGGGTGTAACTGAAAATATCATGTTAGGTCAACTAGCCCCCATAGGCACTGGTGAATGTGCCCTGTTACTTAATGATGAGATGCTAAAGAATGCTATTGAGCTCCAGCTACCTAGCTATATGGAAGGACTTGATTTTGGCATGACCCCTGGCCGTTCCCCAATATCTGCTACTCCATACCACGAAGGCTTGATGTCTCCAAATTATCTGTTGAGCCCAAATCTCCGGCTGTCTCCTAGCAACGATGCACAGTTTTCACCATATGTTGGTGGTATGGCATTTTCTCCTACTTCATCTCCTGGTTACAGTCCATCATCACCAGGCTACAGTCCATCATCACCTGGTTACAGCCCCACTTCACCAGGGTACAGTCCCACATCCCCTGGATACAGCCCCACATCACCTGGGTACAGTCCTACCTCTCCAACATACAGCCCTAGCTCTCCAGGATACAGTCCTACGAGCCCAGCTTATTCACCTACAAGTCCATCCTACTCTCCCACATCACCCAGCTACAGTCCCACATCACCCAGCTACAGCCCAACTTCTCCCAGTTACAGCCCTACATCTCCCAGCTATAGCCCCACTTCACCTGCATACAGCCCAACATCTCCAGCATACAGCCCCACTTCACCTGCCTATAGTCCTACTTCACCATCATATAGTCCAACATCACCTTCCTATAGTCCAACTTCGCCTTCCTACAGCCCCACATCACCCTCTTACAGCCCAACATCTCCCTCATATAGCCCTACATCACCTGCTTACAGCCCTACCTCTCCTGGGTACAGCCCCACATCACCCTCTTACAGCCCGACATCACCATCATATAGTCCTACTTCCCCAAGTTACAATCCACAGTCTGCTAAGTATAGCCCTTCATTGGCATATTCTCCCAGCAGTCCGAGGTTGTCTCCATCAAGTCCCTATAGTCCCACGTCTCCAAGCTACAGCCCAACGTCTCCATCATACTCACCAACATCTCCATCGTATTCTCCCTCAAGCCCAACATACAGTCCCAGCAGCCCATATAATTCTGGTACCAGCCCAGACTATAGCCCAAGTTCACCGCAATTTAGTCCCAGTACTGGTTACTCACCAAGTCAACCTGGCTACTCACCATCCTCAACCAGCCAGTACACTCCACAGACGAGTGACAAGGATGATACAGGCACTCAGTGA

Protein sequence

>Msa0712890

MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMAVVQIEHGETTERGKPKIGGLSDPRLGTIDRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADENDHKFKQAMRIKNPKHRLRKILDACKNKTKCEGGDDIDLPEHDTKEPLKKSRGGCGAQQPKITIEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDSLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPTILKPEPLWTGKQVFNLIIPKQINLIRYSSWHNENERGPITPGDTMVRIEKGELLTGTLCKKTLGTGTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMETINQTISQAKDKVKQLIREAQEKKLEAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKTDFDRAFRYEFDDENWRPTYMLEEPVEDLKTIREFRNVFEAEVQKLDADRVQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLRVVPGEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEVCKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDVDFVKSYYEMPDEEVALDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDGDLTCIFNDDNAEKLILRIRIMNDEAPKGDIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKIQKFDENEGFKPHEEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNETGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGECALLLNDEMLKNAIELQLPSYMEGLDFGMTPGRSPISATPYHEGLMSPNYLLSPNLRLSPSNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTSDKDDTGTQ*