AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0970570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970570 MtrunA17_Chr6g0449531 95.255 569 13 6 1 559 1 565 0.0 1054
Msa0970570 MtrunA17_Chr6g0449551 64.810 395 76 7 159 529 1 356 6.90e-135 397
Msa0970570 MtrunA17_Chr4g0021121 29.885 174 93 4 54 214 12 169 6.03e-19 90.1
Msa0970570 MtrunA17_Chr6g0449541 54.082 98 32 3 53 146 24 112 1.10e-18 82.0
Msa0970570 MtrunA17_Chr2g0324351 30.952 168 110 3 47 214 6 167 2.22e-16 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970570 AT3G01560.1 43.509 570 226 19 1 545 1 499 1.21e-91 291
Msa0970570 AT3G01560.2 44.884 430 166 14 123 545 5 370 2.47e-68 226
Msa0970570 AT5G14540.1 41.818 330 126 11 1 302 7 298 7.74e-57 199
Msa0970570 AT4G28300.1 31.325 166 103 3 53 212 14 174 9.16e-16 80.5
Msa0970570 AT4G28300.2 37.778 90 56 0 123 212 27 116 6.02e-15 77.8

Find 204 sgRNAs with CRISPR-Local

Find 452 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAATACGACGTCGTTTA+TGG 0.118460 6_4:+2114358 Msa0970570:exon
TCTGGATATGGTACATTATC+TGG 0.152917 6_4:+2119819 Msa0970570:CDS
GGAGGTTGAGGAGGTGCATT+AGG 0.241389 6_4:-2119330 None:intergenic
GCTTATCCAGCACTGTATTT+AGG 0.248589 6_4:-2120139 None:intergenic
TTTCCACGTTATCTTTGATT+TGG 0.250493 6_4:+2120557 Msa0970570:three_prime_UTR
GGCAGTTGGTATTGCTGATT+TGG 0.254348 6_4:-2119471 None:intergenic
GTTCTCCTGGAGCTGGTAAC+AGG 0.264309 6_4:+2120012 Msa0970570:CDS
TCAATAAATAAAAGTGGATT+TGG 0.268544 6_4:+2120470 Msa0970570:three_prime_UTR
TTGCAGTTGAGGTGGATTTC+CGG 0.277046 6_4:-2119616 None:intergenic
CTAACTGTTAACAGATTTGA+TGG 0.282200 6_4:+2120530 Msa0970570:three_prime_UTR
AGTAAGAATTACTTTGGAAT+TGG 0.285557 6_4:-2114627 None:intergenic
CAACCTTCCCAACAGTTCTA+TGG 0.307696 6_4:+2119741 Msa0970570:CDS
TGTGCAGAACTATGGTTCTT+TGG 0.308399 6_4:+2117527 Msa0970570:intron
ATTGCTGATTTGGAATTTCC+TGG 0.315081 6_4:-2119461 None:intergenic
GAAGATATTGTTGAGTTTGC+AGG 0.333603 6_4:-2119263 None:intergenic
GGGATCTGAGAGTATTGATT+TGG 0.338854 6_4:-2119387 None:intergenic
TGAACAGGTGATGGCAAGTA+TGG 0.342162 6_4:-2119435 None:intergenic
AGATGGTGGCTGGCGGAGAT+TGG 0.345438 6_4:-2119697 None:intergenic
TTCCACGTTATCTTTGATTT+GGG 0.346573 6_4:+2120558 Msa0970570:three_prime_UTR
GGATGTGGCTGCTGAGTTAA+AGG 0.364654 6_4:-2119492 None:intergenic
GTTCACAATTCTTCTTGTTA+AGG 0.366195 6_4:-2114445 None:intergenic
CAACATATACAGGTGCAAAC+AGG 0.369517 6_4:+2119084 Msa0970570:intron
GGAAGGTTGAGGAGGTCCGC+TGG 0.372446 6_4:-2119727 None:intergenic
TCTGAGGAACAGTTGGGGTT+GGG 0.372597 6_4:-2119407 None:intergenic
GGTGAGTTCTGGTTTCTACT+TGG 0.372649 6_4:-2117692 None:intergenic
AGTCGACAAAGTTGCCACTA+TGG 0.375561 6_4:+2120052 Msa0970570:CDS
GTTTATGGACAAACAGATAA+TGG 0.379393 6_4:+2114373 Msa0970570:CDS
TATTGATTTGGAAGTTGAGC+TGG 0.379878 6_4:-2119375 None:intergenic
TCACCATCTTGAGAGTTCTA+TGG 0.380351 6_4:+2117710 Msa0970570:CDS
GCGAGTTACTCTTCTGGATA+TGG 0.385894 6_4:+2119807 Msa0970570:CDS
AACGATGAAGAAGAATTATC+AGG 0.388069 6_4:-2114581 None:intergenic
GAGGTTGAGGAGGTGCATTA+GGG 0.392897 6_4:-2119329 None:intergenic
GTCGATGAAATCGTTGTTGT+TGG 0.399316 6_4:-2114423 None:intergenic
TCAAAGAAACAAGAACAAAA+TGG 0.400272 6_4:-2120379 None:intergenic
AGATCAAGATAGTCATGAAT+TGG 0.401418 6_4:-2120432 None:intergenic
CCTACTGAGCCATATCGATA+TGG 0.402683 6_4:+2119843 Msa0970570:CDS
CCTGGTGCGAGTTACTCTTC+TGG 0.414200 6_4:+2119801 Msa0970570:CDS
CATAAGGTGGTTCCTCTAGA+TGG 0.414395 6_4:-2119653 None:intergenic
ACTCTCAAGATGGTGAGTTC+TGG 0.417745 6_4:-2117703 None:intergenic
TCTGCAGTAAGTGGTGGTTC+AGG 0.419285 6_4:+2119990 Msa0970570:CDS
GATGGTGGCTGGCGGAGATT+GGG 0.419902 6_4:-2119696 None:intergenic
GGTCCGCTGGGTGGCTGAGA+TGG 0.426894 6_4:-2119714 None:intergenic
GGAATTTCCTGGGATTGAAC+AGG 0.428460 6_4:-2119450 None:intergenic
TGTGGGAGTACGCGGGCAGT+AGG 0.431246 6_4:-2119951 None:intergenic
TATGGCGGACCACCTCAATA+TGG 0.437524 6_4:+2119861 Msa0970570:CDS
GAGTTCTATGGATGATTTGA+AGG 0.438756 6_4:+2117722 Msa0970570:CDS
CTCTGAGGAACAGTTGGGGT+TGG 0.439164 6_4:-2119408 None:intergenic
TGGGTGGCTGAGATGGTGGC+TGG 0.440005 6_4:-2119707 None:intergenic
AATTTGCATCATGTTCTAGA+AGG 0.442921 6_4:+2117651 Msa0970570:CDS
TATCGCTTCTTTCGCTATGA+TGG 0.445668 6_4:+2120251 Msa0970570:three_prime_UTR
GCTTTGAAGGTTTATGAGGA+AGG 0.455373 6_4:+2120304 Msa0970570:three_prime_UTR
TTTCGCTATGATGGTTTATG+AGG 0.460042 6_4:+2120260 Msa0970570:three_prime_UTR
TTGCTGATTTGGAATTTCCT+GGG 0.460881 6_4:-2119460 None:intergenic
GTGAGTTCTGGTTTCTACTT+GGG 0.461793 6_4:-2117691 None:intergenic
TGGGTAACCGTTTCCACCAC+TGG 0.462468 6_4:-2119922 None:intergenic
GATCTCTCTGAGGAACAGTT+GGG 0.462714 6_4:-2119413 None:intergenic
AAGCTTCTGAGAATTGTTTG+AGG 0.463515 6_4:-2114324 None:intergenic
GGTGCCCCTGGTTGAGGATG+TGG 0.464633 6_4:-2119507 None:intergenic
CTGGATATGGTACATTATCT+GGG 0.467302 6_4:+2119820 Msa0970570:CDS
ACCTCAACTGCAATCTTCCA+TGG 0.469026 6_4:+2119626 Msa0970570:CDS
ACAGATGAAGTTTGCTGCAC+AGG 0.469179 6_4:-2119225 None:intergenic
TTGTCGACTATATCATCAAC+AGG 0.475344 6_4:-2120038 None:intergenic
TGCGGAGGTGCCCCTGGTTG+AGG 0.476318 6_4:-2119513 None:intergenic
AGGTTGAGGAGGTGCATTAG+GGG 0.476796 6_4:-2119328 None:intergenic
TCGAACAATGAAGAAACATA+TGG 0.477114 6_4:+2117626 Msa0970570:CDS
GGTGGTCCGCCATATCGATA+TGG 0.479221 6_4:-2119852 None:intergenic
GCTATGATGGTTTATGAGGA+AGG 0.481794 6_4:+2120264 Msa0970570:three_prime_UTR
AAGATATTGTTGAGTTTGCA+GGG 0.482811 6_4:-2119262 None:intergenic
CAGCAACAGAGAGGTTGGTT+TGG 0.486990 6_4:+2120188 Msa0970570:CDS
GGATCTCTCTGAGGAACAGT+TGG 0.488207 6_4:-2119414 None:intergenic
GTCACAACTACCTAACGCTT+CGG 0.489064 6_4:+2119893 Msa0970570:CDS
GTATCTGTTGGAAATAATCA+TGG 0.490366 6_4:+2117744 Msa0970570:CDS
GGTTCAGGTTCTCCTGGAGC+TGG 0.491108 6_4:+2120005 Msa0970570:CDS
GTTTCCCTCACATGATCTCT+AGG 0.493026 6_4:-2120080 None:intergenic
AGTGGTGGTTCAGGTTCTCC+TGG 0.495836 6_4:+2119999 Msa0970570:CDS
ATGCAGTAGGTATTGCTTGT+GGG 0.496173 6_4:-2119968 None:intergenic
GAGGTGGCAAACTTTGTTGA+GGG 0.499915 6_4:-2119353 None:intergenic
TGTTGATGCGGAGGTGCCCC+TGG 0.501541 6_4:-2119519 None:intergenic
CCATATCGATATGGCTCAGT+AGG 0.503012 6_4:-2119843 None:intergenic
TAAGTCTGAGAAGGAACATA+AGG 0.503459 6_4:-2119669 None:intergenic
AATGCAAGCTCAGCTACAAC+TGG 0.504070 6_4:+2119137 Msa0970570:CDS
GGTTGAGGAGGTGCATTAGG+GGG 0.504519 6_4:-2119327 None:intergenic
CAACAGCCACCGCATTCATC+CGG 0.505529 6_4:+2119597 Msa0970570:CDS
CTTTGAAGGTTTATGAGGAA+GGG 0.506268 6_4:+2120305 Msa0970570:three_prime_UTR
TCTGTTAACAGTTAGTTATG+TGG 0.509355 6_4:-2120522 None:intergenic
TCCTGGGATTGAACAGGTGA+TGG 0.510658 6_4:-2119444 None:intergenic
AATAATCATGGAATCACTGA+TGG 0.511625 6_4:+2117756 Msa0970570:CDS
GATGAATGCGGTGGCTGTTG+TGG 0.514588 6_4:-2119594 None:intergenic
GAAGGTTGAGGAGGTCCGCT+GGG 0.515293 6_4:-2119726 None:intergenic
AACGCTTCGGCGGCTTCCAG+TGG 0.517765 6_4:+2119906 Msa0970570:CDS
GCGGCTTCCAGTGGTGGAAA+CGG 0.518066 6_4:+2119915 Msa0970570:CDS
ATCATGTGAGGGAAACGGTT+CGG 0.519055 6_4:+2120087 Msa0970570:CDS
GTGGGAGTACGCGGGCAGTA+GGG 0.525756 6_4:-2119950 None:intergenic
TTGAAGCATCAACAGCGCTC+TGG 0.526502 6_4:-2117587 None:intergenic
GTCGACAAAGTTGCCACTAT+GGG 0.527260 6_4:+2120053 Msa0970570:CDS
CAGCAGCCACATCCTCAACC+AGG 0.527408 6_4:+2119501 Msa0970570:CDS
CACAGGATCTGATGTGGCAC+GGG 0.529555 6_4:-2119208 None:intergenic
CCGCTGGGTGGCTGAGATGG+TGG 0.532280 6_4:-2119711 None:intergenic
CGGTGTTCCATAGAACTGTT+GGG 0.532437 6_4:-2119748 None:intergenic
GCTTCGGCGGCTTCCAGTGG+TGG 0.534650 6_4:+2119909 Msa0970570:CDS
AACAGGGGTGCATGATATCA+AGG 0.535028 6_4:+2119101 Msa0970570:CDS
TGATGGGAAATTGAGGCTGT+TGG 0.535199 6_4:+2117773 Msa0970570:CDS
GTTGGAGAATATTCTTTCTG+AGG 0.538216 6_4:+2117791 Msa0970570:CDS
CTATGATGGTTTATGAGGAA+GGG 0.539080 6_4:+2120265 Msa0970570:three_prime_UTR
GTTCGGAAGCTGACAGAGAA+TGG 0.539452 6_4:+2120104 Msa0970570:CDS
GCCATCACCTGTTCAATCCC+AGG 0.542684 6_4:+2119443 Msa0970570:CDS
ATATGCAGCAACAGAGAGGT+TGG 0.542821 6_4:+2120183 Msa0970570:CDS
ATTATCAGGAAGTGAACGAA+TGG 0.545429 6_4:-2114567 None:intergenic
CCCATGGAAGATTGCAGTTG+AGG 0.546082 6_4:-2119627 None:intergenic
GAAACCACGGGGATTGATTG+TGG 0.547752 6_4:-2119303 None:intergenic
GATGATTTGAAGGTATCTGT+TGG 0.550649 6_4:+2117732 Msa0970570:CDS
ATTTGGGTTGATCCATCTTG+AGG 0.552072 6_4:+2120574 Msa0970570:three_prime_UTR
TTCTCCTGGAGCTGGTAACA+GGG 0.552561 6_4:+2120013 Msa0970570:CDS
GGCTGTTGTGGAGGTAGATG+AGG 0.553096 6_4:-2119582 None:intergenic
AACAGAGAGGTTGGTTTGGT+AGG 0.553859 6_4:+2120192 Msa0970570:CDS
AACATATACAGGTGCAAACA+GGG 0.554029 6_4:+2119085 Msa0970570:intron
ATGGAAGATTGCAGTTGAGG+TGG 0.554693 6_4:-2119624 None:intergenic
GGAACCCTGTTACCAGCTCC+AGG 0.557039 6_4:-2120017 None:intergenic
GACTGTTTACTACCATATTG+AGG 0.557194 6_4:-2119873 None:intergenic
CCACAATACCAACCTCAAGA+TGG 0.558214 6_4:-2120586 None:intergenic
CGCGGGCAGTAGGGAGCTGT+GGG 0.561381 6_4:-2119941 None:intergenic
TAGAGATCATGTGAGGGAAA+CGG 0.562181 6_4:+2120082 Msa0970570:CDS
GTGGCTGAGATGGTGGCTGG+CGG 0.563635 6_4:-2119704 None:intergenic
CCTACTGCATCTGCAGTAAG+TGG 0.565690 6_4:+2119981 Msa0970570:CDS
TTGGGAGGATAAGTCTGAGA+AGG 0.566348 6_4:-2119678 None:intergenic
GCGGTGTTCCATAGAACTGT+TGG 0.568740 6_4:-2119749 None:intergenic
ACGCGGGCAGTAGGGAGCTG+TGG 0.569642 6_4:-2119942 None:intergenic
GGTGGCTGGCGGAGATTGGG+AGG 0.569643 6_4:-2119693 None:intergenic
TTTGAAGGTTTATGAGGAAG+GGG 0.571670 6_4:+2120306 Msa0970570:three_prime_UTR
TATGATGGTTTATGAGGAAG+GGG 0.571790 6_4:+2120266 Msa0970570:three_prime_UTR
TTATCAGGAAGTGAACGAAT+GGG 0.573173 6_4:-2114566 None:intergenic
GCACAGGATCTGATGTGGCA+CGG 0.579401 6_4:-2119209 None:intergenic
GTATTGCTTGTGGGAGTACG+CGG 0.579602 6_4:-2119959 None:intergenic
TAGAACTGTTGGGAAGGTTG+AGG 0.579906 6_4:-2119738 None:intergenic
GGAGGTGGCAAACTTTGTTG+AGG 0.579955 6_4:-2119354 None:intergenic
ATGGGTTGAAAATCGTAGCT+AGG 0.582541 6_4:-2114548 None:intergenic
CAGATAATGGATCTAAGCCA+TGG 0.583832 6_4:+2114386 Msa0970570:CDS
CCTCAACTGCAATCTTCCAT+GGG 0.585108 6_4:+2119627 Msa0970570:CDS
CTGGATAAGCTTATGAATGA+AGG 0.585757 6_4:+2120152 Msa0970570:CDS
AGCAGCCACATCCTCAACCA+GGG 0.586197 6_4:+2119502 Msa0970570:CDS
ATCTCTAGGGAATCCCATAG+TGG 0.587762 6_4:-2120066 None:intergenic
AGTTGACCTAAATACAGTGC+TGG 0.587959 6_4:+2120133 Msa0970570:CDS
TGATTTGGAAGTTGAGCTGG+AGG 0.590060 6_4:-2119372 None:intergenic
CATCCATAGAACTCTCAAGA+TGG 0.597918 6_4:-2117713 None:intergenic
AACTGTTGGGAAGGTTGAGG+AGG 0.598242 6_4:-2119735 None:intergenic
ATAATCATGGAATCACTGAT+GGG 0.603214 6_4:+2117757 Msa0970570:CDS
TTTGGAAGTTGAGCTGGAGG+TGG 0.603503 6_4:-2119369 None:intergenic
GGCTGAGAGTATTGATGATG+AGG 0.603851 6_4:-2119555 None:intergenic
GGTGGCAAACTTTGTTGAGG+GGG 0.604162 6_4:-2119351 None:intergenic
GGTTGAGGAGGTCCGCTGGG+TGG 0.604968 6_4:-2119723 None:intergenic
TGTGGAAGATTATAAGACGA+AGG 0.605650 6_4:-2119285 None:intergenic
TGCTGATATTGTTGATGCGG+AGG 0.607900 6_4:-2119528 None:intergenic
TTATGTTTGTGCTTAAAACG+TGG 0.608517 6_4:-2114292 None:intergenic
TTCCTCTAGATGGTGACCCA+TGG 0.609804 6_4:-2119643 None:intergenic
GATGCAGTAGGTATTGCTTG+TGG 0.612043 6_4:-2119969 None:intergenic
TTCTAGAAGGTGTTAGTGCG+CGG 0.613505 6_4:+2117664 Msa0970570:CDS
TTTCCCTCACATGATCTCTA+GGG 0.616191 6_4:-2120079 None:intergenic
TTCCATGGGTCACCATCTAG+AGG 0.616790 6_4:+2119641 Msa0970570:CDS
CCACTTACTGCAGATGCAGT+AGG 0.618868 6_4:-2119981 None:intergenic
GTCTGCTGATATTGTTGATG+CGG 0.620702 6_4:-2119531 None:intergenic
TTCTATGGAACACCGCCACA+AGG 0.620721 6_4:+2119756 Msa0970570:CDS
AAGCTTATGAATGAAGGTGG+TGG 0.622241 6_4:+2120158 Msa0970570:CDS
TTGAAGGTTTATGAGGAAGG+GGG 0.623366 6_4:+2120307 Msa0970570:three_prime_UTR
GAACCACCATCGAGTAGACC+TGG 0.628427 6_4:+2119783 Msa0970570:CDS
GAATCACTGATGGGAAATTG+AGG 0.629747 6_4:+2117766 Msa0970570:CDS
GAATGCGGTGGCTGTTGTGG+AGG 0.630061 6_4:-2119591 None:intergenic
GCTGCTGAGTTAAAGGCAGT+TGG 0.630771 6_4:-2119485 None:intergenic
GTTCCATAGAACTGTTGGGA+AGG 0.631446 6_4:-2119744 None:intergenic
GCTGAGAGTATTGATGATGA+GGG 0.632355 6_4:-2119554 None:intergenic
GTCTGAGAAGGAACATAAGG+TGG 0.637200 6_4:-2119666 None:intergenic
ATCTCTCTGAGGAACAGTTG+GGG 0.642126 6_4:-2119412 None:intergenic
CTCGCACCAGGTCTACTCGA+TGG 0.643974 6_4:-2119789 None:intergenic
TAAACCTTCAAAGCAAAACA+AGG 0.644842 6_4:-2120295 None:intergenic
TGGAAGATGATGATCCTCCA+TGG 0.644949 6_4:-2114403 None:intergenic
GTAGCTAGGAACAATATCAT+CGG 0.645739 6_4:-2114534 None:intergenic
GCAGCCACATCCTCAACCAG+GGG 0.647975 6_4:+2119503 Msa0970570:CDS
TGTGGAGGTAGATGAGGCGG+TGG 0.648997 6_4:-2119576 None:intergenic
AACCCAAATCAAAGATAACG+TGG 0.656028 6_4:-2120560 None:intergenic
GAATTGGAATCAGAATTCCA+AGG 0.657124 6_4:-2114611 None:intergenic
ACTGCATCTGCAGTAAGTGG+TGG 0.658963 6_4:+2119984 Msa0970570:CDS
AGGTGGCAAACTTTGTTGAG+GGG 0.660893 6_4:-2119352 None:intergenic
TGTTGTGGAGGTAGATGAGG+CGG 0.661173 6_4:-2119579 None:intergenic
AGATATTGTTGAGTTTGCAG+GGG 0.662805 6_4:-2119261 None:intergenic
GATGGTGGTTCATATCCTTG+TGG 0.666986 6_4:-2119771 None:intergenic
TATTGCTTGTGGGAGTACGC+GGG 0.670170 6_4:-2119958 None:intergenic
GATTCCCTAGAGATCATGTG+AGG 0.674405 6_4:+2120075 Msa0970570:CDS
TGTTTACTACCATATTGAGG+TGG 0.680049 6_4:-2119870 None:intergenic
GCACCAGGTCTACTCGATGG+TGG 0.681299 6_4:-2119786 None:intergenic
CCACCATCTCAGCCACCCAG+CGG 0.689523 6_4:+2119711 Msa0970570:CDS
ATTCCCTAGAGATCATGTGA+GGG 0.691841 6_4:+2120076 Msa0970570:CDS
GGTGGATTTCCGGATGAATG+CGG 0.691921 6_4:-2119606 None:intergenic
GATAAGCTTATGAATGAAGG+TGG 0.692443 6_4:+2120155 Msa0970570:CDS
ACAACTACCTAACGCTTCGG+CGG 0.699351 6_4:+2119896 Msa0970570:CDS
ACTGAGCCATATCGATATGG+CGG 0.701260 6_4:+2119846 Msa0970570:CDS
GGCAAGTATGGATCTCTCTG+AGG 0.701957 6_4:-2119423 None:intergenic
GGATTTCCGGATGAATGCGG+TGG 0.703500 6_4:-2119603 None:intergenic
GGTGGTTCATATCCTTGTGG+CGG 0.711124 6_4:-2119768 None:intergenic
ATGATGGTTTATGAGGAAGG+GGG 0.718881 6_4:+2120267 Msa0970570:three_prime_UTR
TTGCTGCACAGGATCTGATG+TGG 0.720740 6_4:-2119214 None:intergenic
CTGAGAGTATTGATGATGAG+GGG 0.722939 6_4:-2119553 None:intergenic
TCTTCCACAATCAATCCCCG+TGG 0.724568 6_4:+2119299 Msa0970570:CDS
ACATATACAGGTGCAAACAG+GGG 0.731424 6_4:+2119086 Msa0970570:intron
GGTGATATGCAGCAACAGAG+AGG 0.768274 6_4:+2120179 Msa0970570:CDS
ATAATGGATCTAAGCCATGG+AGG 0.784217 6_4:+2114389 Msa0970570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATAAATTTATATACTTA+GGG - chr6_4:2115379-2115398 None:intergenic 10.0%
!! TCTTATAAATTTATATACTT+AGG - chr6_4:2115380-2115399 None:intergenic 10.0%
!!! TTTCTCAATTTTTTTTTTTT+TGG - chr6_4:2115650-2115669 None:intergenic 10.0%
!!! TATTTTAAATTTCTTTAATG+GGG + chr6_4:2118629-2118648 Msa0970570:intron 10.0%
!!! TATTTTTCAATAAATAAAAG+TGG + chr6_4:2120464-2120483 Msa0970570:three_prime_UTR 10.0%
!!! TATTATTTATAAGCTTGTTA+AGG + chr6_4:2115047-2115066 Msa0970570:intron 15.0%
!!! AATGTTTTGTTGTATTTAAA+AGG + chr6_4:2116149-2116168 Msa0970570:intron 15.0%
!!! TTTTGAGAAAGATTATTTTT+TGG - chr6_4:2116762-2116781 None:intergenic 15.0%
!!! ATAAATTTTTTAAGTTACCA+AGG - chr6_4:2117065-2117084 None:intergenic 15.0%
!! AACTTTGCATAATATTAAAA+AGG - chr6_4:2117157-2117176 None:intergenic 15.0%
!! TTATCTTAGTTATTTGTTTA+TGG + chr6_4:2117292-2117311 Msa0970570:intron 15.0%
!!! TAGTTTAACCTTAAAATTTT+TGG + chr6_4:2117985-2118004 Msa0970570:intron 15.0%
!!! TTTAATTTATTATGGGAAAA+TGG + chr6_4:2118373-2118392 Msa0970570:intron 15.0%
!!! GTTTAAAGTAAGAATTACTT+TGG - chr6_4:2114636-2114655 None:intergenic 20.0%
!! TTTGTGTGATTGATTAATTA+TGG + chr6_4:2114720-2114739 Msa0970570:intron 20.0%
!!! TTTGATTTGATTACTATGTA+AGG + chr6_4:2114820-2114839 Msa0970570:intron 20.0%
!!! TAATTTGAAGTTTATAGCTT+AGG + chr6_4:2114863-2114882 Msa0970570:intron 20.0%
!!! ATTTTAAGCTTATGAAGAAA+AGG - chr6_4:2115159-2115178 None:intergenic 20.0%
!! TCTATTATAAATCATCAATG+AGG + chr6_4:2115559-2115578 Msa0970570:intron 20.0%
!! AAAAAAAATTGAGAAACTTG+TGG + chr6_4:2115654-2115673 Msa0970570:intron 20.0%
!! TTGAAATTGATTGTATAAAG+TGG + chr6_4:2115806-2115825 Msa0970570:intron 20.0%
!!! TTATCAAATAGTTGATATAG+TGG + chr6_4:2115871-2115890 Msa0970570:intron 20.0%
!!! TTTAATGCTTCTGAAAATAT+AGG + chr6_4:2116181-2116200 Msa0970570:intron 20.0%
!! TTAGTCATATACTTAACTTA+AGG + chr6_4:2116439-2116458 Msa0970570:intron 20.0%
!!! CTTTTTGTTGATTCAAATAT+TGG + chr6_4:2117882-2117901 Msa0970570:intron 20.0%
!!! ATTTTAGTTCATTTTTAGCA+TGG - chr6_4:2118054-2118073 None:intergenic 20.0%
!! TGAACTAAAATTAAAGCTTT+AGG + chr6_4:2118063-2118082 Msa0970570:intron 20.0%
!!! AAATTAAAGCTTTAGGTATT+AGG + chr6_4:2118070-2118089 Msa0970570:intron 20.0%
!!! TTGCCACTTTAATTTATTAT+GGG + chr6_4:2118366-2118385 Msa0970570:intron 20.0%
!! TTTCCCATAATAAATTAAAG+TGG - chr6_4:2118372-2118391 None:intergenic 20.0%
!!! TATTGAAAATTTTGTGAATG+TGG + chr6_4:2118512-2118531 Msa0970570:intron 20.0%
!!! ATTATTGTTTTCATCATGAA+AGG + chr6_4:2118556-2118575 Msa0970570:intron 20.0%
!! ACAAAGGAAAACAAATTATT+TGG + chr6_4:2118871-2118890 Msa0970570:intron 20.0%
!! AAAACAAATTATTTGGATGA+TGG + chr6_4:2118878-2118897 Msa0970570:intron 20.0%
!! AAACAAATTATTTGGATGAT+GGG + chr6_4:2118879-2118898 Msa0970570:intron 20.0%
!! AGAACAAAATGGTAAAAAAA+CGG - chr6_4:2120371-2120390 None:intergenic 20.0%
!!! TCAATAAATAAAAGTGGATT+TGG + chr6_4:2120470-2120489 Msa0970570:three_prime_UTR 20.0%
!!! AGTAAGAATTACTTTGGAAT+TGG - chr6_4:2114630-2114649 None:intergenic 25.0%
!! TTTGTCTTGTTGTGAAAATT+AGG + chr6_4:2114754-2114773 Msa0970570:intron 25.0%
!!! ATTTTGAGAGTTTAGATGAA+TGG + chr6_4:2114787-2114806 Msa0970570:intron 25.0%
!! TCTTTTTGTATAAGCTATCT+TGG + chr6_4:2115253-2115272 Msa0970570:intron 25.0%
! TTGAGATTATCTACTAAGTA+CGG - chr6_4:2115337-2115356 None:intergenic 25.0%
! TTATAAATCATCAATGAGGT+TGG + chr6_4:2115563-2115582 Msa0970570:intron 25.0%
! CCTTTAAACTACTCAATTAA+TGG - chr6_4:2115704-2115723 None:intergenic 25.0%
! CCATTAATTGAGTAGTTTAA+AGG + chr6_4:2115701-2115720 Msa0970570:intron 25.0%
!! TATCAACTATTTGATAACAC+TGG - chr6_4:2115868-2115887 None:intergenic 25.0%
!!! CATACTTTTTTGTTGTTCTT+AGG + chr6_4:2116074-2116093 Msa0970570:intron 25.0%
!!! AATGAAAAGTGTCTGTTAAA+AGG + chr6_4:2116241-2116260 Msa0970570:intron 25.0%
!! ACTTTGATGTTGTCATTTAT+AGG - chr6_4:2116370-2116389 None:intergenic 25.0%
! AGTATATGACTAATTATGAG+TGG - chr6_4:2116432-2116451 None:intergenic 25.0%
! CTTTCAATGATACAAAGTAA+AGG + chr6_4:2116554-2116573 Msa0970570:intron 25.0%
!!! AGAAAGATTATTTTTTGGTC+GGG - chr6_4:2116757-2116776 None:intergenic 25.0%
!!! GAGAAAGATTATTTTTTGGT+CGG - chr6_4:2116758-2116777 None:intergenic 25.0%
! AATCTATACAACAATGGTTA+AGG + chr6_4:2116905-2116924 Msa0970570:intron 25.0%
!! AATTACAACATTTTGTACCT+TGG + chr6_4:2117045-2117064 Msa0970570:intron 25.0%
! TTGAATAAGTGCATAGTAAA+AGG + chr6_4:2117175-2117194 Msa0970570:intron 25.0%
!!! ACATTATTTTTGCTTTGCTT+TGG + chr6_4:2117365-2117384 Msa0970570:intron 25.0%
!!! CATTATTTTTGCTTTGCTTT+GGG + chr6_4:2117366-2117385 Msa0970570:intron 25.0%
!!! ATTATTTTTGCTTTGCTTTG+GGG + chr6_4:2117367-2117386 Msa0970570:intron 25.0%
! CAGAAATTAATGTTAGAAGT+TGG - chr6_4:2117835-2117854 None:intergenic 25.0%
! CAACTTCTAACATTAATTTC+TGG + chr6_4:2117833-2117852 Msa0970570:intron 25.0%
!!! TTGTTTTGATAAATTAAGCC+TGG - chr6_4:2117936-2117955 None:intergenic 25.0%
!! ACTGCAAACCAAAAATTTTA+AGG - chr6_4:2117996-2118015 None:intergenic 25.0%
!!! AAAATTTTTGGTTTGCAGTT+TGG + chr6_4:2117997-2118016 Msa0970570:intron 25.0%
!!! AAATTTTTGGTTTGCAGTTT+GGG + chr6_4:2117998-2118017 Msa0970570:intron 25.0%
! ATACTACTATACTAGATTAG+TGG + chr6_4:2118129-2118148 Msa0970570:intron 25.0%
! AAATTAAAGTGGCAACAATA+TGG - chr6_4:2118361-2118380 None:intergenic 25.0%
!!! GTTGCCACTTTAATTTATTA+TGG + chr6_4:2118365-2118384 Msa0970570:intron 25.0%
! TGAAAACAATAATGTAAGAG+TGG - chr6_4:2118549-2118568 None:intergenic 25.0%
! AACCTAAGAAAAAGTAACAA+AGG + chr6_4:2118746-2118765 Msa0970570:intron 25.0%
! ATGTCAAACAAAAGAGTAAA+AGG - chr6_4:2119063-2119082 None:intergenic 25.0%
! TCAAAGAAACAAGAACAAAA+TGG - chr6_4:2120382-2120401 None:intergenic 25.0%
!! AAACTGTAATGTTTTCTTGT+GGG + chr6_4:2120408-2120427 Msa0970570:three_prime_UTR 25.0%
TTATGTTTGTGCTTAAAACG+TGG - chr6_4:2114295-2114314 None:intergenic 30.0%
GTTTATGGACAAACAGATAA+TGG + chr6_4:2114373-2114392 Msa0970570:CDS 30.0%
GTTCACAATTCTTCTTGTTA+AGG - chr6_4:2114448-2114467 None:intergenic 30.0%
TCGCTAATTCATCACAAAAA+TGG + chr6_4:2114497-2114516 Msa0970570:CDS 30.0%
CTAATTCATCACAAAAATGG+CGG + chr6_4:2114500-2114519 Msa0970570:CDS 30.0%
AACGATGAAGAAGAATTATC+AGG - chr6_4:2114584-2114603 None:intergenic 30.0%
!! TTACTATGTAAGGCTTTGTT+TGG + chr6_4:2114830-2114849 Msa0970570:intron 30.0%
! GTTGTTGTTGTATAGCATTA+GGG + chr6_4:2114958-2114977 Msa0970570:intron 30.0%
AAAATAAGCTCAATCCAAAC+AGG + chr6_4:2115174-2115193 Msa0970570:intron 30.0%
!! CATAAGTTTTGTGACTGTTT+GGG - chr6_4:2115306-2115325 None:intergenic 30.0%
!! ACATAAGTTTTGTGACTGTT+TGG - chr6_4:2115307-2115326 None:intergenic 30.0%
TGAGATTATCTACTAAGTAC+GGG - chr6_4:2115336-2115355 None:intergenic 30.0%
!!! TCGACGAATTTTTAGAATAG+GGG - chr6_4:2115627-2115646 None:intergenic 30.0%
!!! GTCGACGAATTTTTAGAATA+GGG - chr6_4:2115628-2115647 None:intergenic 30.0%
AAAAATTGAGAAACTTGTGG+AGG + chr6_4:2115657-2115676 Msa0970570:intron 30.0%
TCAAAATACACTTACAAGAG+CGG - chr6_4:2115790-2115809 None:intergenic 30.0%
AACACAGTATTGTCAAATAG+CGG + chr6_4:2115951-2115970 Msa0970570:intron 30.0%
TTGTTCTTAGGATAATGCTA+GGG + chr6_4:2116086-2116105 Msa0970570:intron 30.0%
ATATAGGTCTTACTTACGTA+AGG + chr6_4:2116197-2116216 Msa0970570:intron 30.0%
TATAGGTCTTACTTACGTAA+GGG + chr6_4:2116198-2116217 Msa0970570:intron 30.0%
! AGTTCTAACATTGTCAAGAT+CGG + chr6_4:2116266-2116285 Msa0970570:intron 30.0%
GTAGCAAGATAGTAAAACAT+TGG + chr6_4:2116323-2116342 Msa0970570:intron 30.0%
! TAGAGGTAGTATTTCTTTTG+TGG - chr6_4:2116499-2116518 None:intergenic 30.0%
AAAAGGTTCAAACTACGAAT+AGG + chr6_4:2116617-2116636 Msa0970570:intron 30.0%
AAAGGTTCAAACTACGAATA+GGG + chr6_4:2116618-2116637 Msa0970570:intron 30.0%
GATTGCAATCTATACAACAA+TGG + chr6_4:2116899-2116918 Msa0970570:intron 30.0%
AAAGATAAGTTTGTGAGATC+TGG + chr6_4:2117213-2117232 Msa0970570:intron 30.0%
! AAGTTTCAGCATTGAATGTT+AGG + chr6_4:2117236-2117255 Msa0970570:intron 30.0%
TTTCATGTATCAGACTAATC+TGG + chr6_4:2117398-2117417 Msa0970570:intron 30.0%
AATAATATATCGCACCATCT+TGG + chr6_4:2117459-2117478 Msa0970570:intron 30.0%
TCGAACAATGAAGAAACATA+TGG + chr6_4:2117626-2117645 Msa0970570:CDS 30.0%
! AATTTGCATCATGTTCTAGA+AGG + chr6_4:2117651-2117670 Msa0970570:CDS 30.0%
GTATCTGTTGGAAATAATCA+TGG + chr6_4:2117744-2117763 Msa0970570:CDS 30.0%
AATAATCATGGAATCACTGA+TGG + chr6_4:2117756-2117775 Msa0970570:CDS 30.0%
ATAATCATGGAATCACTGAT+GGG + chr6_4:2117757-2117776 Msa0970570:CDS 30.0%
!! CATTAATTTCTGGCAACATT+TGG + chr6_4:2117843-2117862 Msa0970570:intron 30.0%
!! TTGTCACTTTAGTTAACTCT+GGG + chr6_4:2118172-2118191 Msa0970570:intron 30.0%
! TTGACATAACTTTTGCACTA+TGG + chr6_4:2118250-2118269 Msa0970570:intron 30.0%
ACAATATGGCAAACATATCA+AGG - chr6_4:2118347-2118366 None:intergenic 30.0%
AAAGTGACAACTACACAAAT+GGG - chr6_4:2118401-2118420 None:intergenic 30.0%
TAAAGTGACAACTACACAAA+TGG - chr6_4:2118402-2118421 None:intergenic 30.0%
TCTATCGTTTACAACTCATA+TGG + chr6_4:2118457-2118476 Msa0970570:intron 30.0%
! TGAAAATTTTGTGAATGTGG+TGG + chr6_4:2118515-2118534 Msa0970570:intron 30.0%
!!! AGCCTTTGTTACTTTTTCTT+AGG - chr6_4:2118751-2118770 None:intergenic 30.0%
TATTTAATCGTCAGCCAAAA+AGG + chr6_4:2118775-2118794 Msa0970570:intron 30.0%
!! ACACATTCCATTGTTTTGTA+AGG + chr6_4:2118799-2118818 Msa0970570:intron 30.0%
!! GTCGTTTTCTTCATTCATTT+AGG - chr6_4:2118853-2118872 None:intergenic 30.0%
ATGAATGAAGAAAACGACAA+AGG + chr6_4:2118855-2118874 Msa0970570:intron 30.0%
CATATGCATAAAGTTCTCTA+TGG - chr6_4:2118905-2118924 None:intergenic 30.0%
!! GTGTTTTTACATGCTACTAT+TGG + chr6_4:2118964-2118983 Msa0970570:intron 30.0%
TCAAACAAAAGAGTAAAAGG+AGG - chr6_4:2119060-2119079 None:intergenic 30.0%
GTTTGACATACAACATATAC+AGG + chr6_4:2119074-2119093 Msa0970570:intron 30.0%
AAGATATTGTTGAGTTTGCA+GGG - chr6_4:2119265-2119284 None:intergenic 30.0%
TAAACCTTCAAAGCAAAACA+AGG - chr6_4:2120298-2120317 None:intergenic 30.0%
!!! TTTTGCTTTGAAGGTTTATG+AGG + chr6_4:2120300-2120319 Msa0970570:three_prime_UTR 30.0%
! GAAACTGTAATGTTTTCTTG+TGG + chr6_4:2120407-2120426 Msa0970570:three_prime_UTR 30.0%
AGATCAAGATAGTCATGAAT+TGG - chr6_4:2120435-2120454 None:intergenic 30.0%
TCTGTTAACAGTTAGTTATG+TGG - chr6_4:2120525-2120544 None:intergenic 30.0%
CTAACTGTTAACAGATTTGA+TGG + chr6_4:2120530-2120549 Msa0970570:three_prime_UTR 30.0%
TTTCCACGTTATCTTTGATT+TGG + chr6_4:2120557-2120576 Msa0970570:three_prime_UTR 30.0%
! TTCCACGTTATCTTTGATTT+GGG + chr6_4:2120558-2120577 Msa0970570:three_prime_UTR 30.0%
! AAGCTTCTGAGAATTGTTTG+AGG - chr6_4:2114327-2114346 None:intergenic 35.0%
AATGAATACGACGTCGTTTA+TGG + chr6_4:2114358-2114377 Msa0970570:exon 35.0%
GTAGCTAGGAACAATATCAT+CGG - chr6_4:2114537-2114556 None:intergenic 35.0%
TTATCAGGAAGTGAACGAAT+GGG - chr6_4:2114569-2114588 None:intergenic 35.0%
ATTATCAGGAAGTGAACGAA+TGG - chr6_4:2114570-2114589 None:intergenic 35.0%
GAATTGGAATCAGAATTCCA+AGG - chr6_4:2114614-2114633 None:intergenic 35.0%
CATATCCCACTAAGTAAAGT+CGG - chr6_4:2114933-2114952 None:intergenic 35.0%
! GGTTGTTGTTGTATAGCATT+AGG + chr6_4:2114957-2114976 Msa0970570:intron 35.0%
AGTTTACACATAAGCACCAA+GGG - chr6_4:2115200-2115219 None:intergenic 35.0%
TAGTTTACACATAAGCACCA+AGG - chr6_4:2115201-2115220 None:intergenic 35.0%
TTATATACTTAGGGCCTGTT+TGG - chr6_4:2115370-2115389 None:intergenic 35.0%
GAGAAACTCCGAATAAATTG+TGG + chr6_4:2115448-2115467 Msa0970570:intron 35.0%
AACTCCGAATAAATTGTGGT+TGG + chr6_4:2115452-2115471 Msa0970570:intron 35.0%
TCTGCCAACCACAATTTATT+CGG - chr6_4:2115459-2115478 None:intergenic 35.0%
TAAATCATCAATGAGGTTGG+TGG + chr6_4:2115566-2115585 Msa0970570:intron 35.0%
!!! ACGAATTTTTAGAATAGGGG+AGG - chr6_4:2115624-2115643 None:intergenic 35.0%
!!! GGTCGACGAATTTTTAGAAT+AGG - chr6_4:2115629-2115648 None:intergenic 35.0%
GGTGCAAAGGTAATCTAAAT+TGG + chr6_4:2115678-2115697 Msa0970570:intron 35.0%
ATTAGATGTCAGTGTCAAAC+TGG - chr6_4:2115740-2115759 None:intergenic 35.0%
CTAACTTCAATCGTAAAACG+CGG - chr6_4:2116032-2116051 None:intergenic 35.0%
CGATTGAAGTTAGTGCTTAA+TGG + chr6_4:2116039-2116058 Msa0970570:intron 35.0%
TTGAAGTTAGTGCTTAATGG+AGG + chr6_4:2116042-2116061 Msa0970570:intron 35.0%
GTTGTTCTTAGGATAATGCT+AGG + chr6_4:2116085-2116104 Msa0970570:intron 35.0%
TATTCTCAATGATTCTGCCT+AGG + chr6_4:2116289-2116308 Msa0970570:intron 35.0%
! GTATTTCTTTTGTGGACTTC+TGG - chr6_4:2116491-2116510 None:intergenic 35.0%
GAAAGATGTGAACTTCTGAA+TGG + chr6_4:2116640-2116659 Msa0970570:intron 35.0%
AAGGTCAAACAACACGATAT+AGG + chr6_4:2116714-2116733 Msa0970570:intron 35.0%
AGGTCAAACAACACGATATA+GGG + chr6_4:2116715-2116734 Msa0970570:intron 35.0%
CATGCGATTTGACTCATTAA+GGG + chr6_4:2116842-2116861 Msa0970570:intron 35.0%
TGTAGCGTTGTGTAATACAT+AGG + chr6_4:2117429-2117448 Msa0970570:intron 35.0%
AAGAAAACCCTAAACCAAGA+TGG - chr6_4:2117476-2117495 None:intergenic 35.0%
! CCATAGTTCTGCACAAAATA+AGG - chr6_4:2117522-2117541 None:intergenic 35.0%
!!! CCTTATTTTGTGCAGAACTA+TGG + chr6_4:2117519-2117538 Msa0970570:intron 35.0%
GAGTTCTATGGATGATTTGA+AGG + chr6_4:2117722-2117741 Msa0970570:CDS 35.0%
!! GATGATTTGAAGGTATCTGT+TGG + chr6_4:2117732-2117751 Msa0970570:CDS 35.0%
GTTGGAGAATATTCTTTCTG+AGG + chr6_4:2117791-2117810 Msa0970570:CDS 35.0%
!! GTTGTCACTTTAGTTAACTC+TGG + chr6_4:2118171-2118190 Msa0970570:intron 35.0%
!! TGTCACTTTAGTTAACTCTG+GGG + chr6_4:2118173-2118192 Msa0970570:intron 35.0%
! AATTTTGTGAATGTGGTGGT+TGG + chr6_4:2118519-2118538 Msa0970570:intron 35.0%
! CAATGGAATGTGTTCCTTTT+TGG - chr6_4:2118792-2118811 None:intergenic 35.0%
! GTGTTGACCTTACAAAACAA+TGG - chr6_4:2118809-2118828 None:intergenic 35.0%
ATTGGTGTATAATTGCGACT+CGG + chr6_4:2118982-2119001 Msa0970570:intron 35.0%
ACTACCGTGTATTCTTATTC+TGG + chr6_4:2119033-2119052 Msa0970570:intron 35.0%
AGGACCAGAATAAGAATACA+CGG - chr6_4:2119040-2119059 None:intergenic 35.0%
AACATATACAGGTGCAAACA+GGG + chr6_4:2119085-2119104 Msa0970570:intron 35.0%
AGATATTGTTGAGTTTGCAG+GGG - chr6_4:2119264-2119283 None:intergenic 35.0%
GAAGATATTGTTGAGTTTGC+AGG - chr6_4:2119266-2119285 None:intergenic 35.0%
TGTGGAAGATTATAAGACGA+AGG - chr6_4:2119288-2119307 None:intergenic 35.0%
!! TATTGATTTGGAAGTTGAGC+TGG - chr6_4:2119378-2119397 None:intergenic 35.0%
!! TTGCTGATTTGGAATTTCCT+GGG - chr6_4:2119463-2119482 None:intergenic 35.0%
!! ATTGCTGATTTGGAATTTCC+TGG - chr6_4:2119464-2119483 None:intergenic 35.0%
TAAGTCTGAGAAGGAACATA+AGG - chr6_4:2119672-2119691 None:intergenic 35.0%
TCTGGATATGGTACATTATC+TGG + chr6_4:2119819-2119838 Msa0970570:CDS 35.0%
CTGGATATGGTACATTATCT+GGG + chr6_4:2119820-2119839 Msa0970570:CDS 35.0%
TGTTTACTACCATATTGAGG+TGG - chr6_4:2119873-2119892 None:intergenic 35.0%
GACTGTTTACTACCATATTG+AGG - chr6_4:2119876-2119895 None:intergenic 35.0%
! TTGTCGACTATATCATCAAC+AGG - chr6_4:2120041-2120060 None:intergenic 35.0%
CTGGATAAGCTTATGAATGA+AGG + chr6_4:2120152-2120171 Msa0970570:CDS 35.0%
GATAAGCTTATGAATGAAGG+TGG + chr6_4:2120155-2120174 Msa0970570:CDS 35.0%
TTTCGCTATGATGGTTTATG+AGG + chr6_4:2120260-2120279 Msa0970570:three_prime_UTR 35.0%
CTATGATGGTTTATGAGGAA+GGG + chr6_4:2120265-2120284 Msa0970570:three_prime_UTR 35.0%
TATGATGGTTTATGAGGAAG+GGG + chr6_4:2120266-2120285 Msa0970570:three_prime_UTR 35.0%
!!! CTATCCTTGTTTTGCTTTGA+AGG + chr6_4:2120291-2120310 Msa0970570:three_prime_UTR 35.0%
! CTTTGAAGGTTTATGAGGAA+GGG + chr6_4:2120305-2120324 Msa0970570:three_prime_UTR 35.0%
TTTGAAGGTTTATGAGGAAG+GGG + chr6_4:2120306-2120325 Msa0970570:three_prime_UTR 35.0%
AACCCAAATCAAAGATAACG+TGG - chr6_4:2120563-2120582 None:intergenic 35.0%
!! CAGATAATGGATCTAAGCCA+TGG + chr6_4:2114386-2114405 Msa0970570:CDS 40.0%
!! ATAATGGATCTAAGCCATGG+AGG + chr6_4:2114389-2114408 Msa0970570:CDS 40.0%
GTCGATGAAATCGTTGTTGT+TGG - chr6_4:2114426-2114445 None:intergenic 40.0%
ATTCATCACAAAAATGGCGG+TGG + chr6_4:2114503-2114522 Msa0970570:CDS 40.0%
! ATGGGTTGAAAATCGTAGCT+AGG - chr6_4:2114551-2114570 None:intergenic 40.0%
!! CTTCATCGTTTTCAAGACCT+TGG + chr6_4:2114594-2114613 Msa0970570:CDS 40.0%
! ATGTAGCCGACTTTACTTAG+TGG + chr6_4:2114924-2114943 Msa0970570:intron 40.0%
! TGTAGCCGACTTTACTTAGT+GGG + chr6_4:2114925-2114944 Msa0970570:intron 40.0%
CGACTTTACTTAGTGGGATA+TGG + chr6_4:2114931-2114950 Msa0970570:intron 40.0%
TTACTTAGTGGGATATGGCT+TGG + chr6_4:2114936-2114955 Msa0970570:intron 40.0%
GTATAGCATTAGGGTCTGTT+TGG + chr6_4:2114967-2114986 Msa0970570:intron 40.0%
TCAAACAAGCCAATCCAAAC+AGG + chr6_4:2115353-2115372 Msa0970570:intron 40.0%
TAAATTGTGGTTGGCAGAGA+TGG + chr6_4:2115461-2115480 Msa0970570:intron 40.0%
AATACACTTACAAGAGCGGA+AGG - chr6_4:2115786-2115805 None:intergenic 40.0%
AAGTTAGTGCTTAATGGAGG+AGG + chr6_4:2116045-2116064 Msa0970570:intron 40.0%
TTCTTAGGATAATGCTAGGG+AGG + chr6_4:2116089-2116108 Msa0970570:intron 40.0%
TCTTAGGATAATGCTAGGGA+GGG + chr6_4:2116090-2116109 Msa0970570:intron 40.0%
! CTTACGTAAGGGCAACTTTT+AGG + chr6_4:2116209-2116228 Msa0970570:intron 40.0%
! TGATTCTGCCTAGGATTAGT+TGG + chr6_4:2116298-2116317 Msa0970570:intron 40.0%
!! GATTCTGCCTAGGATTAGTT+GGG + chr6_4:2116299-2116318 Msa0970570:intron 40.0%
!! ATTCTGCCTAGGATTAGTTG+GGG + chr6_4:2116300-2116319 Msa0970570:intron 40.0%
ATGAGTGGTTTCAGATGCTA+TGG - chr6_4:2116417-2116436 None:intergenic 40.0%
ACAGAAGACATGAACAGAGA+GGG + chr6_4:2116581-2116600 Msa0970570:intron 40.0%
TGTGAACTTCTGAATGGAGA+AGG + chr6_4:2116646-2116665 Msa0970570:intron 40.0%
CGAGAGAGATGAAAATTTCG+AGG + chr6_4:2116670-2116689 Msa0970570:intron 40.0%
AGAGATGAAAATTTCGAGGC+AGG + chr6_4:2116674-2116693 Msa0970570:intron 40.0%
GAGATGAAAATTTCGAGGCA+GGG + chr6_4:2116675-2116694 Msa0970570:intron 40.0%
!! GGGTTTCTGAAGTACAGAAA+AGG + chr6_4:2116695-2116714 Msa0970570:intron 40.0%
GGTCAAACAACACGATATAG+GGG + chr6_4:2116716-2116735 Msa0970570:intron 40.0%
GCATGCGATTTGACTCATTA+AGG + chr6_4:2116841-2116860 Msa0970570:intron 40.0%
ATATCGCACCATCTTGGTTT+AGG + chr6_4:2117465-2117484 Msa0970570:intron 40.0%
TATCGCACCATCTTGGTTTA+GGG + chr6_4:2117466-2117485 Msa0970570:intron 40.0%
TGTGCAGAACTATGGTTCTT+TGG + chr6_4:2117527-2117546 Msa0970570:intron 40.0%
! GGATTCTTTTGAACCTGCAA+AGG + chr6_4:2117548-2117567 Msa0970570:CDS 40.0%
! TTTTCTACAGTCACCTTTGC+AGG - chr6_4:2117564-2117583 None:intergenic 40.0%
!! GTGAGTTCTGGTTTCTACTT+GGG - chr6_4:2117694-2117713 None:intergenic 40.0%
TCACCATCTTGAGAGTTCTA+TGG + chr6_4:2117710-2117729 Msa0970570:CDS 40.0%
CATCCATAGAACTCTCAAGA+TGG - chr6_4:2117716-2117735 None:intergenic 40.0%
GAATCACTGATGGGAAATTG+AGG + chr6_4:2117766-2117785 Msa0970570:CDS 40.0%
GCAGTTTGGGTAACTATACT+TGG + chr6_4:2118011-2118030 Msa0970570:intron 40.0%
! GTCACTTTAGTTAACTCTGG+GGG + chr6_4:2118174-2118193 Msa0970570:intron 40.0%
ATACAACCTTGATATCCCCT+AGG - chr6_4:2118320-2118339 None:intergenic 40.0%
TTAGCGTTATCGTTTCTCAC+AGG - chr6_4:2118931-2118950 None:intergenic 40.0%
CAACATATACAGGTGCAAAC+AGG + chr6_4:2119084-2119103 Msa0970570:intron 40.0%
ACATATACAGGTGCAAACAG+GGG + chr6_4:2119086-2119105 Msa0970570:intron 40.0%
!! GGGATCTGAGAGTATTGATT+TGG - chr6_4:2119390-2119409 None:intergenic 40.0%
GTCTGCTGATATTGTTGATG+CGG - chr6_4:2119534-2119553 None:intergenic 40.0%
!! CTGAGAGTATTGATGATGAG+GGG - chr6_4:2119556-2119575 None:intergenic 40.0%
!! GCTGAGAGTATTGATGATGA+GGG - chr6_4:2119557-2119576 None:intergenic 40.0%
! ATGCAGTAGGTATTGCTTGT+GGG - chr6_4:2119971-2119990 None:intergenic 40.0%
ATTCCCTAGAGATCATGTGA+GGG + chr6_4:2120076-2120095 Msa0970570:CDS 40.0%
TTTCCCTCACATGATCTCTA+GGG - chr6_4:2120082-2120101 None:intergenic 40.0%
TAGAGATCATGTGAGGGAAA+CGG + chr6_4:2120082-2120101 Msa0970570:CDS 40.0%
AGTTGACCTAAATACAGTGC+TGG + chr6_4:2120133-2120152 Msa0970570:CDS 40.0%
GCTTATCCAGCACTGTATTT+AGG - chr6_4:2120142-2120161 None:intergenic 40.0%
AAGCTTATGAATGAAGGTGG+TGG + chr6_4:2120158-2120177 Msa0970570:CDS 40.0%
TATCGCTTCTTTCGCTATGA+TGG + chr6_4:2120251-2120270 Msa0970570:three_prime_UTR 40.0%
GCTATGATGGTTTATGAGGA+AGG + chr6_4:2120264-2120283 Msa0970570:three_prime_UTR 40.0%
ATGATGGTTTATGAGGAAGG+GGG + chr6_4:2120267-2120286 Msa0970570:three_prime_UTR 40.0%
!! GCTTTGAAGGTTTATGAGGA+AGG + chr6_4:2120304-2120323 Msa0970570:three_prime_UTR 40.0%
TTGAAGGTTTATGAGGAAGG+GGG + chr6_4:2120307-2120326 Msa0970570:three_prime_UTR 40.0%
TGGAAGATGATGATCCTCCA+TGG - chr6_4:2114406-2114425 None:intergenic 45.0%
GCATTAGGGTCTGTTTGGAT+TGG + chr6_4:2114972-2114991 Msa0970570:intron 45.0%
TACTTAGGGCCTGTTTGGAT+TGG - chr6_4:2115365-2115384 None:intergenic 45.0%
ACCTTTCGCTCACAATAGCT+GGG + chr6_4:2115488-2115507 Msa0970570:intron 45.0%
! AGAAACTTGTGGAGGTGCAA+AGG + chr6_4:2115665-2115684 Msa0970570:intron 45.0%
ATAGTGGCGCTATAGCATAG+CGG + chr6_4:2115887-2115906 Msa0970570:intron 45.0%
!! TTCTGCCTAGGATTAGTTGG+GGG + chr6_4:2116301-2116320 Msa0970570:intron 45.0%
!! TCTTTTGTGGACTTCTGGCT+GGG - chr6_4:2116486-2116505 None:intergenic 45.0%
! TTCTTTTGTGGACTTCTGGC+TGG - chr6_4:2116487-2116506 None:intergenic 45.0%
TGAAAGATGACTTCCACGCA+AGG - chr6_4:2116540-2116559 None:intergenic 45.0%
CACAGAAGACATGAACAGAG+AGG + chr6_4:2116580-2116599 Msa0970570:intron 45.0%
CAACACGATATAGGGGAACA+AGG + chr6_4:2116723-2116742 Msa0970570:intron 45.0%
!! TTCTAGAAGGTGTTAGTGCG+CGG + chr6_4:2117664-2117683 Msa0970570:CDS 45.0%
!! GGTGAGTTCTGGTTTCTACT+TGG - chr6_4:2117695-2117714 None:intergenic 45.0%
ACTCTCAAGATGGTGAGTTC+TGG - chr6_4:2117706-2117725 None:intergenic 45.0%
TGATGGGAAATTGAGGCTGT+TGG + chr6_4:2117773-2117792 Msa0970570:CDS 45.0%
TGGCACCCATTTGTGTATGT+TGG + chr6_4:2118270-2118289 Msa0970570:intron 45.0%
ACCCATTTGTGTATGTTGGC+TGG + chr6_4:2118274-2118293 Msa0970570:intron 45.0%
CCCAGCCAACATACACAAAT+GGG - chr6_4:2118278-2118297 None:intergenic 45.0%
! CCCATTTGTGTATGTTGGCT+GGG + chr6_4:2118275-2118294 Msa0970570:intron 45.0%
TCCCAGCCAACATACACAAA+TGG - chr6_4:2118279-2118298 None:intergenic 45.0%
! GTGTATGTTGGCTGGGAAAA+TGG + chr6_4:2118282-2118301 Msa0970570:intron 45.0%
! TATGTTGGCTGGGAAAATGG+TGG + chr6_4:2118285-2118304 Msa0970570:intron 45.0%
TGGGAAAATGGTGGTCATGT+GGG + chr6_4:2118294-2118313 Msa0970570:intron 45.0%
! AACAGGGGTGCATGATATCA+AGG + chr6_4:2119101-2119120 Msa0970570:CDS 45.0%
AATGCAAGCTCAGCTACAAC+TGG + chr6_4:2119137-2119156 Msa0970570:CDS 45.0%
!! ACAGATGAAGTTTGCTGCAC+AGG - chr6_4:2119228-2119247 None:intergenic 45.0%
AGGTGGCAAACTTTGTTGAG+GGG - chr6_4:2119355-2119374 None:intergenic 45.0%
GAGGTGGCAAACTTTGTTGA+GGG - chr6_4:2119356-2119375 None:intergenic 45.0%
! TGATTTGGAAGTTGAGCTGG+AGG - chr6_4:2119375-2119394 None:intergenic 45.0%
! ATCTCTCTGAGGAACAGTTG+GGG - chr6_4:2119415-2119434 None:intergenic 45.0%
! GATCTCTCTGAGGAACAGTT+GGG - chr6_4:2119416-2119435 None:intergenic 45.0%
! TGAACAGGTGATGGCAAGTA+TGG - chr6_4:2119438-2119457 None:intergenic 45.0%
GGAATTTCCTGGGATTGAAC+AGG - chr6_4:2119453-2119472 None:intergenic 45.0%
! GGCAGTTGGTATTGCTGATT+TGG - chr6_4:2119474-2119493 None:intergenic 45.0%
TGCTGATATTGTTGATGCGG+AGG - chr6_4:2119531-2119550 None:intergenic 45.0%
!! GGCTGAGAGTATTGATGATG+AGG - chr6_4:2119558-2119577 None:intergenic 45.0%
! TTGCAGTTGAGGTGGATTTC+CGG - chr6_4:2119619-2119638 None:intergenic 45.0%
ATGGAAGATTGCAGTTGAGG+TGG - chr6_4:2119627-2119646 None:intergenic 45.0%
ACCTCAACTGCAATCTTCCA+TGG + chr6_4:2119626-2119645 Msa0970570:CDS 45.0%
CCTCAACTGCAATCTTCCAT+GGG + chr6_4:2119627-2119646 Msa0970570:CDS 45.0%
CATAAGGTGGTTCCTCTAGA+TGG - chr6_4:2119656-2119675 None:intergenic 45.0%
GTCTGAGAAGGAACATAAGG+TGG - chr6_4:2119669-2119688 None:intergenic 45.0%
TTGGGAGGATAAGTCTGAGA+AGG - chr6_4:2119681-2119700 None:intergenic 45.0%
TAGAACTGTTGGGAAGGTTG+AGG - chr6_4:2119741-2119760 None:intergenic 45.0%
CAACCTTCCCAACAGTTCTA+TGG + chr6_4:2119741-2119760 Msa0970570:CDS 45.0%
GTTCCATAGAACTGTTGGGA+AGG - chr6_4:2119747-2119766 None:intergenic 45.0%
CGGTGTTCCATAGAACTGTT+GGG - chr6_4:2119751-2119770 None:intergenic 45.0%
! GATGGTGGTTCATATCCTTG+TGG - chr6_4:2119774-2119793 None:intergenic 45.0%
GCGAGTTACTCTTCTGGATA+TGG + chr6_4:2119807-2119826 Msa0970570:CDS 45.0%
CCATATCGATATGGCTCAGT+AGG - chr6_4:2119846-2119865 None:intergenic 45.0%
CCTACTGAGCCATATCGATA+TGG + chr6_4:2119843-2119862 Msa0970570:CDS 45.0%
ACTGAGCCATATCGATATGG+CGG + chr6_4:2119846-2119865 Msa0970570:CDS 45.0%
GTCACAACTACCTAACGCTT+CGG + chr6_4:2119893-2119912 Msa0970570:CDS 45.0%
! GATGCAGTAGGTATTGCTTG+TGG - chr6_4:2119972-2119991 None:intergenic 45.0%
AGTCGACAAAGTTGCCACTA+TGG + chr6_4:2120052-2120071 Msa0970570:CDS 45.0%
GTCGACAAAGTTGCCACTAT+GGG + chr6_4:2120053-2120072 Msa0970570:CDS 45.0%
! ATCTCTAGGGAATCCCATAG+TGG - chr6_4:2120069-2120088 None:intergenic 45.0%
GATTCCCTAGAGATCATGTG+AGG + chr6_4:2120075-2120094 Msa0970570:CDS 45.0%
GTTTCCCTCACATGATCTCT+AGG - chr6_4:2120083-2120102 None:intergenic 45.0%
ATCATGTGAGGGAAACGGTT+CGG + chr6_4:2120087-2120106 Msa0970570:CDS 45.0%
ATATGCAGCAACAGAGAGGT+TGG + chr6_4:2120183-2120202 Msa0970570:CDS 45.0%
!! AACAGAGAGGTTGGTTTGGT+AGG + chr6_4:2120192-2120211 Msa0970570:CDS 45.0%
!! AATAATTATAATACAAATTA+GGG - chr6_4:2114658-2114677 None:intergenic 5.0%
!! TAATAATTATAATACAAATT+AGG - chr6_4:2114659-2114678 None:intergenic 5.0%
!!! ATTATTTTAAATTTCTTTAA+TGG + chr6_4:2118627-2118646 Msa0970570:intron 5.0%
!!! TTATTTTAAATTTCTTTAAT+GGG + chr6_4:2118628-2118647 Msa0970570:intron 5.0%
ATAAGCACCAAGGGCCTGTT+TGG - chr6_4:2115191-2115210 None:intergenic 50.0%
GACCTTTCGCTCACAATAGC+TGG + chr6_4:2115487-2115506 Msa0970570:intron 50.0%
CCTTTCGCTCACAATAGCTG+GGG + chr6_4:2115489-2115508 Msa0970570:intron 50.0%
TGCTACCCCCAACTAATCCT+AGG - chr6_4:2116309-2116328 None:intergenic 50.0%
! TTCCACGCAAGGTTCTAGTG+GGG - chr6_4:2116529-2116548 None:intergenic 50.0%
! CTTCCACGCAAGGTTCTAGT+GGG - chr6_4:2116530-2116549 None:intergenic 50.0%
! ACTTCCACGCAAGGTTCTAG+TGG - chr6_4:2116531-2116550 None:intergenic 50.0%
AGGGTCGAGAGAGATGGAAA+AGG + chr6_4:2116600-2116619 Msa0970570:intron 50.0%
! TTGAAGCATCAACAGCGCTC+TGG - chr6_4:2117590-2117609 None:intergenic 50.0%
! TTACACGAGAGCATACACGC+AGG - chr6_4:2117913-2117932 None:intergenic 50.0%
GTGTATGCTCTCGTGTAACC+AGG + chr6_4:2117915-2117934 Msa0970570:intron 50.0%
CTGGGAAAATGGTGGTCATG+TGG + chr6_4:2118293-2118312 Msa0970570:intron 50.0%
TTGCTGCACAGGATCTGATG+TGG - chr6_4:2119217-2119236 None:intergenic 50.0%
TCTTCCACAATCAATCCCCG+TGG + chr6_4:2119299-2119318 Msa0970570:CDS 50.0%
GAAACCACGGGGATTGATTG+TGG - chr6_4:2119306-2119325 None:intergenic 50.0%
TGCATTAGGGGGAGAAACCA+CGG - chr6_4:2119319-2119338 None:intergenic 50.0%
! AGGTTGAGGAGGTGCATTAG+GGG - chr6_4:2119331-2119350 None:intergenic 50.0%
! GAGGTTGAGGAGGTGCATTA+GGG - chr6_4:2119332-2119351 None:intergenic 50.0%
GGTGGCAAACTTTGTTGAGG+GGG - chr6_4:2119354-2119373 None:intergenic 50.0%
GGAGGTGGCAAACTTTGTTG+AGG - chr6_4:2119357-2119376 None:intergenic 50.0%
TTTGGAAGTTGAGCTGGAGG+TGG - chr6_4:2119372-2119391 None:intergenic 50.0%
TCTGAGGAACAGTTGGGGTT+GGG - chr6_4:2119410-2119429 None:intergenic 50.0%
! GGATCTCTCTGAGGAACAGT+TGG - chr6_4:2119417-2119436 None:intergenic 50.0%
GGCAAGTATGGATCTCTCTG+AGG - chr6_4:2119426-2119445 None:intergenic 50.0%
TCCTGGGATTGAACAGGTGA+TGG - chr6_4:2119447-2119466 None:intergenic 50.0%
GCTGCTGAGTTAAAGGCAGT+TGG - chr6_4:2119488-2119507 None:intergenic 50.0%
GGATGTGGCTGCTGAGTTAA+AGG - chr6_4:2119495-2119514 None:intergenic 50.0%
TGTTGTGGAGGTAGATGAGG+CGG - chr6_4:2119582-2119601 None:intergenic 50.0%
! GGTGGATTTCCGGATGAATG+CGG - chr6_4:2119609-2119628 None:intergenic 50.0%
CCCATGGAAGATTGCAGTTG+AGG - chr6_4:2119630-2119649 None:intergenic 50.0%
TTCCATGGGTCACCATCTAG+AGG + chr6_4:2119641-2119660 Msa0970570:CDS 50.0%
TTCCTCTAGATGGTGACCCA+TGG - chr6_4:2119646-2119665 None:intergenic 50.0%
AACTGTTGGGAAGGTTGAGG+AGG - chr6_4:2119738-2119757 None:intergenic 50.0%
GCGGTGTTCCATAGAACTGT+TGG - chr6_4:2119752-2119771 None:intergenic 50.0%
TTCTATGGAACACCGCCACA+AGG + chr6_4:2119756-2119775 Msa0970570:CDS 50.0%
GGTGGTTCATATCCTTGTGG+CGG - chr6_4:2119771-2119790 None:intergenic 50.0%
!! TATGGCGGACCACCTCAATA+TGG + chr6_4:2119861-2119880 Msa0970570:CDS 50.0%
ACAACTACCTAACGCTTCGG+CGG + chr6_4:2119896-2119915 Msa0970570:CDS 50.0%
! TATTGCTTGTGGGAGTACGC+GGG - chr6_4:2119961-2119980 None:intergenic 50.0%
! GTATTGCTTGTGGGAGTACG+CGG - chr6_4:2119962-2119981 None:intergenic 50.0%
CCACTTACTGCAGATGCAGT+AGG - chr6_4:2119984-2120003 None:intergenic 50.0%
CCTACTGCATCTGCAGTAAG+TGG + chr6_4:2119981-2120000 Msa0970570:CDS 50.0%
ACTGCATCTGCAGTAAGTGG+TGG + chr6_4:2119984-2120003 Msa0970570:CDS 50.0%
TCTGCAGTAAGTGGTGGTTC+AGG + chr6_4:2119990-2120009 Msa0970570:CDS 50.0%
TTCTCCTGGAGCTGGTAACA+GGG + chr6_4:2120013-2120032 Msa0970570:CDS 50.0%
GTTCGGAAGCTGACAGAGAA+TGG + chr6_4:2120104-2120123 Msa0970570:CDS 50.0%
GGTGATATGCAGCAACAGAG+AGG + chr6_4:2120179-2120198 Msa0970570:CDS 50.0%
! CAGCAACAGAGAGGTTGGTT+TGG + chr6_4:2120188-2120207 Msa0970570:CDS 50.0%
GCTCAATCCAAACAGGCCCT+TGG + chr6_4:2115181-2115200 Msa0970570:intron 55.0%
CCCCAGCTATTGTGAGCGAA+AGG - chr6_4:2115492-2115511 None:intergenic 55.0%
GCTCACAATAGCTGGGGTGT+GGG + chr6_4:2115495-2115514 Msa0970570:intron 55.0%
! CTGGGGTGTGGGTTATACTC+TGG + chr6_4:2115506-2115525 Msa0970570:intron 55.0%
!! GTTGGTGGTTCTGACTGACC+TGG + chr6_4:2115581-2115600 Msa0970570:intron 55.0%
GCACACTCTCAAGCAATGCC+AGG - chr6_4:2115602-2115621 None:intergenic 55.0%
GGATAATGCTAGGGAGGGTG+AGG + chr6_4:2116095-2116114 Msa0970570:intron 55.0%
TAGGGAGGGTGAGGCTCATT+GGG + chr6_4:2116104-2116123 Msa0970570:intron 55.0%
TCTAGTGGGGCTGAAGGTAG+AGG - chr6_4:2116516-2116535 None:intergenic 55.0%
! CAAGGTTCTAGTGGGGCTGA+AGG - chr6_4:2116522-2116541 None:intergenic 55.0%
ACAGAGAGGGTCGAGAGAGA+TGG + chr6_4:2116594-2116613 Msa0970570:intron 55.0%
AATGGTGGTCATGTGGGCCT+AGG + chr6_4:2118300-2118319 Msa0970570:intron 55.0%
ATGGTGGTCATGTGGGCCTA+GGG + chr6_4:2118301-2118320 Msa0970570:intron 55.0%
TGTGGGCCTAGGGGATATCA+AGG + chr6_4:2118311-2118330 Msa0970570:intron 55.0%
CACAGGATCTGATGTGGCAC+GGG - chr6_4:2119211-2119230 None:intergenic 55.0%
GCACAGGATCTGATGTGGCA+CGG - chr6_4:2119212-2119231 None:intergenic 55.0%
CATTAGGGGGAGAAACCACG+GGG - chr6_4:2119317-2119336 None:intergenic 55.0%
GCATTAGGGGGAGAAACCAC+GGG - chr6_4:2119318-2119337 None:intergenic 55.0%
! GGTTGAGGAGGTGCATTAGG+GGG - chr6_4:2119330-2119349 None:intergenic 55.0%
! GGAGGTTGAGGAGGTGCATT+AGG - chr6_4:2119333-2119352 None:intergenic 55.0%
CTTTGTTGAGGGGGAGGTTG+AGG - chr6_4:2119345-2119364 None:intergenic 55.0%
GGCAAACTTTGTTGAGGGGG+AGG - chr6_4:2119351-2119370 None:intergenic 55.0%
! CTCTGAGGAACAGTTGGGGT+TGG - chr6_4:2119411-2119430 None:intergenic 55.0%
GCCATCACCTGTTCAATCCC+AGG + chr6_4:2119443-2119462 Msa0970570:CDS 55.0%
AGCAGCCACATCCTCAACCA+GGG + chr6_4:2119502-2119521 Msa0970570:CDS 55.0%
GGCTGTTGTGGAGGTAGATG+AGG - chr6_4:2119585-2119604 None:intergenic 55.0%
GATGAATGCGGTGGCTGTTG+TGG - chr6_4:2119597-2119616 None:intergenic 55.0%
CAACAGCCACCGCATTCATC+CGG + chr6_4:2119597-2119616 Msa0970570:CDS 55.0%
GGATTTCCGGATGAATGCGG+TGG - chr6_4:2119606-2119625 None:intergenic 55.0%
GAACCACCATCGAGTAGACC+TGG + chr6_4:2119783-2119802 Msa0970570:CDS 55.0%
CCAGAAGAGTAACTCGCACC+AGG - chr6_4:2119804-2119823 None:intergenic 55.0%
CCTGGTGCGAGTTACTCTTC+TGG + chr6_4:2119801-2119820 Msa0970570:CDS 55.0%
GGTGGTCCGCCATATCGATA+TGG - chr6_4:2119855-2119874 None:intergenic 55.0%
TGGGTAACCGTTTCCACCAC+TGG - chr6_4:2119925-2119944 None:intergenic 55.0%
! AGTGGTGGTTCAGGTTCTCC+TGG + chr6_4:2119999-2120018 Msa0970570:CDS 55.0%
GTTCTCCTGGAGCTGGTAAC+AGG + chr6_4:2120012-2120031 Msa0970570:CDS 55.0%
TATGAGGAAGGGGGACTTCG+TGG + chr6_4:2120316-2120335 Msa0970570:three_prime_UTR 55.0%
ATGAGGAAGGGGGACTTCGT+GGG + chr6_4:2120317-2120336 Msa0970570:three_prime_UTR 55.0%
CGCTCACAATAGCTGGGGTG+TGG + chr6_4:2115494-2115513 Msa0970570:intron 60.0%
CTAGGGAGGGTGAGGCTCAT+TGG + chr6_4:2116103-2116122 Msa0970570:intron 60.0%
AGGGAGGGTGAGGCTCATTG+GGG + chr6_4:2116105-2116124 Msa0970570:intron 60.0%
AGCCCCACTAGAACCTTGCG+TGG + chr6_4:2116524-2116543 Msa0970570:intron 60.0%
TGGTGGTCATGTGGGCCTAG+GGG + chr6_4:2118302-2118321 Msa0970570:intron 60.0%
TGTTGAGGGGGAGGTTGAGG+AGG - chr6_4:2119342-2119361 None:intergenic 60.0%
CAGCAGCCACATCCTCAACC+AGG + chr6_4:2119501-2119520 Msa0970570:CDS 60.0%
GCAGCCACATCCTCAACCAG+GGG + chr6_4:2119503-2119522 Msa0970570:CDS 60.0%
TGTGGAGGTAGATGAGGCGG+TGG - chr6_4:2119579-2119598 None:intergenic 60.0%
GAATGCGGTGGCTGTTGTGG+AGG - chr6_4:2119594-2119613 None:intergenic 60.0%
! GATGGTGGCTGGCGGAGATT+GGG - chr6_4:2119699-2119718 None:intergenic 60.0%
! AGATGGTGGCTGGCGGAGAT+TGG - chr6_4:2119700-2119719 None:intergenic 60.0%
GAAGGTTGAGGAGGTCCGCT+GGG - chr6_4:2119729-2119748 None:intergenic 60.0%
GCACCAGGTCTACTCGATGG+TGG - chr6_4:2119789-2119808 None:intergenic 60.0%
CTCGCACCAGGTCTACTCGA+TGG - chr6_4:2119792-2119811 None:intergenic 60.0%
! GCGGCTTCCAGTGGTGGAAA+CGG + chr6_4:2119915-2119934 Msa0970570:CDS 60.0%
! GGTTCAGGTTCTCCTGGAGC+TGG + chr6_4:2120005-2120024 Msa0970570:CDS 60.0%
GGAACCCTGTTACCAGCTCC+AGG - chr6_4:2120020-2120039 None:intergenic 60.0%
GGGAGGGTGAGGCTCATTGG+GGG + chr6_4:2116106-2116125 Msa0970570:intron 65.0%
GGTGCCCCTGGTTGAGGATG+TGG - chr6_4:2119510-2119529 None:intergenic 65.0%
!! TGTTGATGCGGAGGTGCCCC+TGG - chr6_4:2119522-2119541 None:intergenic 65.0%
! GTGGCTGAGATGGTGGCTGG+CGG - chr6_4:2119707-2119726 None:intergenic 65.0%
! TGGGTGGCTGAGATGGTGGC+TGG - chr6_4:2119710-2119729 None:intergenic 65.0%
CCACCATCTCAGCCACCCAG+CGG + chr6_4:2119711-2119730 Msa0970570:CDS 65.0%
GGAAGGTTGAGGAGGTCCGC+TGG - chr6_4:2119730-2119749 None:intergenic 65.0%
! CTGGAAGCCGCCGAAGCGTT+AGG - chr6_4:2119906-2119925 None:intergenic 65.0%
AACGCTTCGGCGGCTTCCAG+TGG + chr6_4:2119906-2119925 Msa0970570:CDS 65.0%
! GTGGGAGTACGCGGGCAGTA+GGG - chr6_4:2119953-2119972 None:intergenic 65.0%
! TGTGGGAGTACGCGGGCAGT+AGG - chr6_4:2119954-2119973 None:intergenic 65.0%
AGGAAGGGGGACTTCGTGGG+TGG + chr6_4:2120320-2120339 Msa0970570:three_prime_UTR 65.0%
!! TGCGGAGGTGCCCCTGGTTG+AGG - chr6_4:2119516-2119535 None:intergenic 70.0%
GGTGGCTGGCGGAGATTGGG+AGG - chr6_4:2119696-2119715 None:intergenic 70.0%
CCGCTGGGTGGCTGAGATGG+TGG - chr6_4:2119714-2119733 None:intergenic 70.0%
GGTCCGCTGGGTGGCTGAGA+TGG - chr6_4:2119717-2119736 None:intergenic 70.0%
GGTTGAGGAGGTCCGCTGGG+TGG - chr6_4:2119726-2119745 None:intergenic 70.0%
GCTTCGGCGGCTTCCAGTGG+TGG + chr6_4:2119909-2119928 Msa0970570:CDS 70.0%
CGCGGGCAGTAGGGAGCTGT+GGG - chr6_4:2119944-2119963 None:intergenic 70.0%
ACGCGGGCAGTAGGGAGCTG+TGG - chr6_4:2119945-2119964 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 2114224 2120596 2114224 ID=Msa0970570;Name=Msa0970570
chr6_4 mRNA 2114224 2120596 2114224 ID=Msa0970570-mRNA-1;Parent=Msa0970570;Name=Msa0970570-mRNA-1;_AED=0.04;_eAED=0.04;_QI=135|1|1|1|1|1|3|379|559
chr6_4 exon 2114224 2114637 2114224 ID=Msa0970570-mRNA-1:exon:1029;Parent=Msa0970570-mRNA-1
chr6_4 exon 2117534 2117812 2117534 ID=Msa0970570-mRNA-1:exon:1030;Parent=Msa0970570-mRNA-1
chr6_4 exon 2119096 2120596 2119096 ID=Msa0970570-mRNA-1:exon:1031;Parent=Msa0970570-mRNA-1
chr6_4 five_prime_UTR 2114224 2114358 2114224 ID=Msa0970570-mRNA-1:five_prime_utr;Parent=Msa0970570-mRNA-1
chr6_4 CDS 2114359 2114637 2114359 ID=Msa0970570-mRNA-1:cds;Parent=Msa0970570-mRNA-1
chr6_4 CDS 2117534 2117812 2117534 ID=Msa0970570-mRNA-1:cds;Parent=Msa0970570-mRNA-1
chr6_4 CDS 2119096 2120217 2119096 ID=Msa0970570-mRNA-1:cds;Parent=Msa0970570-mRNA-1
chr6_4 three_prime_UTR 2120218 2120596 2120218 ID=Msa0970570-mRNA-1:three_prime_utr;Parent=Msa0970570-mRNA-1
Gene Sequence

>Msa0970570

ATGAATACGACGTCGTTTATGGACAAACAGATAATGGATCTAAGCCATGGAGGATCATCATCTTCCAACAACAACGATTTCATCGACCTTAACAAGAAGAATTGTGAACAACACGAAGAAGAAGATGAAGATGATGATTCGCTAATTCATCACAAAAATGGCGGTGGAATCAAAACCGATGATATTGTTCCTAGCTACGATTTTCAACCCATTCGTTCACTTCCTGATAATTCTTCTTCATCGTTTTCAAGACCTTGGAATTCTGATTCCAATTCCAAAAACTATGGTTCTTTGGATTCTTTTGAACCTGCAAAGGTGACTGTAGAAAAGAACCAGAGCGCTGTTGATGCTTCAATTTTGTTAGAGATTGATCGAACAATGAAGAAACATATGGACAATTTGCATCATGTTCTAGAAGGTGTTAGTGCGCGGTTAACCCAAGTAGAAACCAGAACTCACCATCTTGAGAGTTCTATGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGAATCACTGATGGGAAATTGAGGCTGTTGGAGAATATTCTTTCTGAGGTGCAAACAGGGGTGCATGATATCAAGGACAAACAAGATATAATGCAAGCTCAGCTACAACTGGCAAAACTACAAGTGTCTAAGACGACAGAGCAACAATCAGAAACTCAAACCCGTGCCACATCAGATCCTGTGCAGCAAACTTCATCTGTATCTGCATCTGCTCCCCTGCAAACTCAACAATATCTTCCTTCGTCTTATAATCTTCCACAATCAATCCCCGTGGTTTCTCCCCCTAATGCACCTCCTCAACCTCCCCCTCAACAAAGTTTGCCACCTCCAGCTCAACTTCCAAATCAATACTCTCAGATCCCAACCCCAACTGTTCCTCAGAGAGATCCATACTTGCCATCACCTGTTCAATCCCAGGAAATTCCAAATCAGCAATACCAACTGCCTTTAACTCAGCAGCCACATCCTCAACCAGGGGCACCTCCGCATCAACAATATCAGCAGACCCCTCATCATCAATACTCTCAGCCACCGCCTCATCTACCTCCACAACAGCCACCGCATTCATCCGGAAATCCACCTCAACTGCAATCTTCCATGGGTCACCATCTAGAGGAACCACCTTATGTTCCTTCTCAGACTTATCCTCCCAATCTCCGCCAGCCACCATCTCAGCCACCCAGCGGACCTCCTCAACCTTCCCAACAGTTCTATGGAACACCGCCACAAGGATATGAACCACCATCGAGTAGACCTGGTGCGAGTTACTCTTCTGGATATGGTACATTATCTGGGCCTACTGAGCCATATCGATATGGCGGACCACCTCAATATGGTAGTAAACAGTCACAACTACCTAACGCTTCGGCGGCTTCCAGTGGTGGAAACGGTTACCCACAGCTCCCTACTGCCCGCGTACTCCCACAAGCAATACCTACTGCATCTGCAGTAAGTGGTGGTTCAGGTTCTCCTGGAGCTGGTAACAGGGTTCCTGTTGATGATATAGTCGACAAAGTTGCCACTATGGGATTCCCTAGAGATCATGTGAGGGAAACGGTTCGGAAGCTGACAGAGAATGGTCAAGCAGTTGACCTAAATACAGTGCTGGATAAGCTTATGAATGAAGGTGGTGGTGATATGCAGCAACAGAGAGGTTGGTTTGGTAGGTAA
Protein sequence

>Msa0970570

MNTTSFMDKQIMDLSHGGSSSSNNNDFIDLNKKNCEQHEEEDEDDDSLIHHKNGGGIKTDDIVPSYDFQPIRSLPDNSSSSFSRPWNSDSNSKNYGSLDSFEPAKVTVEKNQSAVDASILLEIDRTMKKHMDNLHHVLEGVSARLTQVETRTHHLESSMDDLKVSVGNNHGITDGKLRLLENILSEVQTGVHDIKDKQDIMQAQLQLAKLQVSKTTEQQSETQTRATSDPVQQTSSVSASAPLQTQQYLPSSYNLPQSIPVVSPPNAPPQPPPQQSLPPPAQLPNQYSQIPTPTVPQRDPYLPSPVQSQEIPNQQYQLPLTQQPHPQPGAPPHQQYQQTPHHQYSQPPPHLPPQQPPHSSGNPPQLQSSMGHHLEEPPYVPSQTYPPNLRQPPSQPPSGPPQPSQQFYGTPPQGYEPPSSRPGASYSSGYGTLSGPTEPYRYGGPPQYGSKQSQLPNASAASSGGNGYPQLPTARVLPQAIPTASAVSGGSGSPGAGNRVPVDDIVDKVATMGFPRDHVRETVRKLTENGQAVDLNTVLDKLMNEGGGDMQQQRGWFGR*