Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049650 | XP_003604114.1 | 98.598 | 642 | 9 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1299 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049650 | sp|Q9LJE5|ECT2_ARATH | 40.429 | 559 | 259 | 15 | 58 | 562 | 71 | 609 | 9.99e-116 | 363 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049650 | G7JUF0 | 98.598 | 642 | 9 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1299 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0013050 | Msa0049650 | 0.830160 | 3.434409e-55 | -8.615850e-47 |
Msa0027540 | Msa0049650 | -0.824413 | 8.182430e-54 | -8.615850e-47 |
Msa0030380 | Msa0049650 | -0.823974 | 1.037282e-53 | -8.615850e-47 |
Msa0032840 | Msa0049650 | 0.887221 | 1.726675e-72 | -8.615850e-47 |
Msa0036670 | Msa0049650 | -0.808817 | 2.570434e-50 | -8.615850e-47 |
Msa0044240 | Msa0049650 | 0.825373 | 4.857815e-54 | -8.615850e-47 |
Msa0044710 | Msa0049650 | -0.819066 | 1.411927e-52 | -8.615850e-47 |
Msa0046660 | Msa0049650 | 0.827284 | 1.702886e-54 | -8.615850e-47 |
Msa0046750 | Msa0049650 | -0.835936 | 1.255467e-56 | -8.615850e-47 |
Msa0049650 | Msa0050430 | -0.809684 | 1.675561e-50 | -8.615850e-47 |
Msa0049650 | Msa0054730 | 0.815559 | 8.689479e-52 | -8.615850e-47 |
Msa0049650 | Msa0068060 | -0.800227 | 1.591368e-48 | -8.615850e-47 |
Msa0049650 | Msa0074950 | 0.853406 | 2.441449e-61 | -8.615850e-47 |
Msa0049650 | Msa0075310 | -0.817152 | 3.824216e-52 | -8.615850e-47 |
Msa0049650 | Msa0084650 | -0.828107 | 1.080386e-54 | -8.615850e-47 |
Msa0049650 | Msa0090770 | 0.822788 | 1.963826e-53 | -8.615850e-47 |
Msa0049650 | Msa0091770 | -0.805458 | 1.322055e-49 | -8.615850e-47 |
Msa0049650 | Msa0106370 | 0.802934 | 4.432166e-49 | -8.615850e-47 |
Msa0049650 | Msa0114540 | 0.851506 | 8.488977e-61 | -8.615850e-47 |
Msa0049650 | Msa0120330 | -0.803106 | 4.083146e-49 | -8.615850e-47 |
Msa0049650 | Msa0129790 | 0.855533 | 5.920089e-62 | -8.615850e-47 |
Msa0049650 | Msa0140220 | -0.800011 | 1.760516e-48 | -8.615850e-47 |
Msa0049650 | Msa0140570 | -0.825588 | 4.319728e-54 | -8.615850e-47 |
Msa0049650 | Msa0141830 | -0.813081 | 3.065139e-51 | -8.615850e-47 |
Msa0049650 | Msa0143080 | -0.807330 | 5.328837e-50 | -8.615850e-47 |
Msa0049650 | Msa0143140 | 0.821903 | 3.152650e-53 | -8.615850e-47 |
Msa0049650 | Msa0143430 | -0.836745 | 7.813663e-57 | -8.615850e-47 |
Msa0049650 | Msa0148780 | -0.807700 | 4.446701e-50 | -8.615850e-47 |
Msa0049650 | Msa0156650 | 0.818828 | 1.598521e-52 | -8.615850e-47 |
Msa0049650 | Msa0162770 | 0.804638 | 1.962269e-49 | -8.615850e-47 |
Msa0049650 | Msa0163550 | -0.808327 | 3.271154e-50 | -8.615850e-47 |
Msa0049650 | Msa0168100 | -0.817621 | 2.999562e-52 | -8.615850e-47 |
Msa0049650 | Msa0172960 | 0.864394 | 1.254787e-64 | -8.615850e-47 |
Msa0049650 | Msa0173740 | -0.824720 | 6.927349e-54 | -8.615850e-47 |
Msa0049650 | Msa0173820 | -0.827896 | 1.214085e-54 | -8.615850e-47 |
Msa0049650 | Msa0173830 | -0.836440 | 9.349068e-57 | -8.615850e-47 |
Msa0049650 | Msa0183620 | -0.816870 | 4.425008e-52 | -8.615850e-47 |
Msa0049650 | Msa0183640 | 0.836602 | 8.500621e-57 | -8.615850e-47 |
Msa0049650 | Msa0188680 | 0.837305 | 5.623203e-57 | -8.615850e-47 |
Msa0049650 | Msa0188930 | -0.804790 | 1.823655e-49 | -8.615850e-47 |
Msa0049650 | Msa0200950 | 0.820519 | 6.573145e-53 | -8.615850e-47 |
Msa0049650 | Msa0207000 | -0.804725 | 1.881997e-49 | -8.615850e-47 |
Msa0049650 | Msa0208630 | -0.803443 | 3.477520e-49 | -8.615850e-47 |
Msa0049650 | Msa0222920 | -0.834555 | 2.800761e-56 | -8.615850e-47 |
Msa0049650 | Msa0227020 | 0.820887 | 5.408224e-53 | -8.615850e-47 |
Msa0049650 | Msa0228340 | 0.914521 | 1.739600e-84 | -8.615850e-47 |
Msa0049650 | Msa0230550 | 0.891110 | 5.356809e-74 | -8.615850e-47 |
Msa0049650 | Msa0236980 | -0.806786 | 6.946771e-50 | -8.615850e-47 |
Msa0049650 | Msa0238070 | 0.853370 | 2.498999e-61 | -8.615850e-47 |
Msa0049650 | Msa0242680 | -0.806749 | 7.072184e-50 | -8.615850e-47 |
Msa0049650 | Msa0244270 | -0.824431 | 8.100755e-54 | -8.615850e-47 |
Msa0049650 | Msa0258670 | 0.813803 | 2.127244e-51 | -8.615850e-47 |
Msa0049650 | Msa0259860 | 0.892071 | 2.225313e-74 | -8.615850e-47 |
Msa0049650 | Msa0260950 | 0.823890 | 1.085495e-53 | -8.615850e-47 |
Msa0049650 | Msa0264350 | -0.845108 | 4.987252e-59 | -8.615850e-47 |
Msa0049650 | Msa0264570 | -0.806580 | 7.676964e-50 | -8.615850e-47 |
Msa0049650 | Msa0267760 | -0.802795 | 4.734047e-49 | -8.615850e-47 |
Msa0049650 | Msa0270220 | 0.820098 | 8.207420e-53 | -8.615850e-47 |
Msa0049650 | Msa0271140 | -0.819976 | 8.753175e-53 | -8.615850e-47 |
Msa0049650 | Msa0272480 | 0.808638 | 2.806918e-50 | -8.615850e-47 |
Msa0049650 | Msa0280900 | -0.833080 | 6.547251e-56 | -8.615850e-47 |
Msa0049650 | Msa0288240 | -0.809030 | 2.314529e-50 | -8.615850e-47 |
Msa0049650 | Msa0288330 | -0.802374 | 5.784194e-49 | -8.615850e-47 |
Msa0049650 | Msa0296760 | -0.808997 | 2.352111e-50 | -8.615850e-47 |
Msa0049650 | Msa0298940 | -0.826428 | 2.727396e-54 | -8.615850e-47 |
Msa0049650 | Msa0298970 | -0.814045 | 1.881518e-51 | -8.615850e-47 |
Msa0049650 | Msa0302450 | -0.809546 | 1.793634e-50 | -8.615850e-47 |
Msa0049650 | Msa0305340 | 0.811739 | 6.022063e-51 | -8.615850e-47 |
Msa0049650 | Msa0307830 | 0.816537 | 5.253658e-52 | -8.615850e-47 |
Msa0049650 | Msa0318250 | -0.831338 | 1.766211e-55 | -8.615850e-47 |
Msa0049650 | Msa0320100 | -0.825895 | 3.652021e-54 | -8.615850e-47 |
Msa0049650 | Msa0326670 | -0.816734 | 4.747108e-52 | -8.615850e-47 |
Msa0049650 | Msa0332920 | -0.810158 | 1.324531e-50 | -8.615850e-47 |
Msa0049650 | Msa0333720 | 0.834694 | 2.584920e-56 | -8.615850e-47 |
Msa0049650 | Msa0334350 | -0.805234 | 1.472754e-49 | -8.615850e-47 |
Msa0049650 | Msa0341460 | 0.817682 | 2.904964e-52 | -8.615850e-47 |
Msa0049650 | Msa0355270 | -0.813098 | 3.039897e-51 | -8.615850e-47 |
Msa0049650 | Msa0356550 | 0.822662 | 2.100946e-53 | -8.615850e-47 |
Msa0049650 | Msa0358170 | -0.804308 | 2.299073e-49 | -8.615850e-47 |
Msa0049650 | Msa0376450 | 0.832985 | 6.916223e-56 | -8.615850e-47 |
Msa0049650 | Msa0376510 | -0.856162 | 3.875106e-62 | -8.615850e-47 |
Msa0049650 | Msa0380040 | -0.832157 | 1.109360e-55 | -8.615850e-47 |
Msa0049650 | Msa0402330 | -0.824083 | 9.781869e-54 | -8.615850e-47 |
Msa0049650 | Msa0411520 | -0.801507 | 8.715258e-49 | -8.615850e-47 |
Msa0049650 | Msa0414950 | 0.873213 | 1.750088e-67 | -8.615850e-47 |
Msa0049650 | Msa0419820 | -0.811555 | 6.601514e-51 | -8.615850e-47 |
Msa0049650 | Msa0421780 | 0.811180 | 7.965492e-51 | -8.615850e-47 |
Msa0049650 | Msa0423360 | 0.833540 | 5.029183e-56 | -8.615850e-47 |
Msa0049650 | Msa0424920 | -0.843632 | 1.243438e-58 | -8.615850e-47 |
Msa0049650 | Msa0425010 | -0.822311 | 2.535554e-53 | -8.615850e-47 |
Msa0049650 | Msa0425050 | -0.844474 | 7.393939e-59 | -8.615850e-47 |
Msa0049650 | Msa0427200 | -0.812071 | 5.098125e-51 | -8.615850e-47 |
Msa0049650 | Msa0428510 | 0.801010 | 1.101790e-48 | -8.615850e-47 |
Msa0049650 | Msa0429290 | -0.831971 | 1.233512e-55 | -8.615850e-47 |
Msa0049650 | Msa0430620 | -0.849710 | 2.714725e-60 | -8.615850e-47 |
Msa0049650 | Msa0436280 | 0.837579 | 4.782302e-57 | -8.615850e-47 |
Msa0049650 | Msa0437710 | -0.803847 | 2.867240e-49 | -8.615850e-47 |
Msa0049650 | Msa0449590 | 0.815974 | 7.020048e-52 | -8.615850e-47 |
Msa0049650 | Msa0459770 | 0.859025 | 5.500365e-63 | -8.615850e-47 |
Msa0049650 | Msa0465790 | -0.825349 | 4.919932e-54 | -8.615850e-47 |
Msa0049650 | Msa0467900 | 0.819588 | 1.073500e-52 | -8.615850e-47 |
Msa0049650 | Msa0467920 | 0.812770 | 3.586073e-51 | -8.615850e-47 |
Msa0049650 | Msa0467960 | 0.805251 | 1.460613e-49 | -8.615850e-47 |
Msa0049650 | Msa0469910 | 0.810570 | 1.079351e-50 | -8.615850e-47 |
Msa0049650 | Msa0471720 | 0.833234 | 5.995233e-56 | -8.615850e-47 |
Msa0049650 | Msa0475580 | -0.827932 | 1.190593e-54 | -8.615850e-47 |
Msa0049650 | Msa0477830 | -0.804361 | 2.241620e-49 | -8.615850e-47 |
Msa0049650 | Msa0480320 | -0.820244 | 7.598260e-53 | -8.615850e-47 |
Msa0049650 | Msa0497770 | 0.830959 | 2.188398e-55 | -8.615850e-47 |
Msa0049650 | Msa0509970 | -0.808837 | 2.545524e-50 | -8.615850e-47 |
Msa0049650 | Msa0510350 | -0.803380 | 3.584000e-49 | -8.615850e-47 |
Msa0049650 | Msa0516320 | -0.813782 | 2.150471e-51 | -8.615850e-47 |
Msa0049650 | Msa0516510 | 0.829548 | 4.841304e-55 | -8.615850e-47 |
Msa0049650 | Msa0519220 | -0.834053 | 3.744036e-56 | -8.615850e-47 |
Msa0049650 | Msa0520070 | -0.802672 | 5.019205e-49 | -8.615850e-47 |
Msa0049650 | Msa0521880 | -0.802127 | 6.502096e-49 | -8.615850e-47 |
Msa0049650 | Msa0524120 | -0.815233 | 1.026949e-51 | -8.615850e-47 |
Msa0049650 | Msa0532330 | -0.804535 | 2.061873e-49 | -8.615850e-47 |
Msa0049650 | Msa0535030 | -0.816124 | 6.501428e-52 | -8.615850e-47 |
Msa0049650 | Msa0535060 | -0.813686 | 2.257393e-51 | -8.615850e-47 |
Msa0049650 | Msa0540320 | -0.803918 | 2.771924e-49 | -8.615850e-47 |
Msa0049650 | Msa0546380 | -0.832523 | 9.005586e-56 | -8.615850e-47 |
Msa0049650 | Msa0553220 | 0.829386 | 5.298285e-55 | -8.615850e-47 |
Msa0049650 | Msa0562300 | 0.828704 | 7.754515e-55 | -8.615850e-47 |
Msa0049650 | Msa0577940 | 0.985341 | 2.882376e-163 | -8.615850e-47 |
Msa0049650 | Msa0591770 | -0.821836 | 3.267298e-53 | -8.615850e-47 |
Msa0049650 | Msa0607200 | -0.815471 | 9.087933e-52 | -8.615850e-47 |
Msa0049650 | Msa0607340 | 0.873384 | 1.532844e-67 | -8.615850e-47 |
Msa0049650 | Msa0607750 | 0.800546 | 1.369929e-48 | -8.615850e-47 |
Msa0049650 | Msa0616020 | -0.800564 | 1.358567e-48 | -8.615850e-47 |
Msa0049650 | Msa0618010 | -0.815742 | 7.909855e-52 | -8.615850e-47 |
Msa0049650 | Msa0621120 | -0.807895 | 4.042173e-50 | -8.615850e-47 |
Msa0049650 | Msa0623700 | -0.815808 | 7.645919e-52 | -8.615850e-47 |
Msa0049650 | Msa0625530 | 0.984758 | 1.680602e-161 | -8.615850e-47 |
Msa0049650 | Msa0638280 | -0.803893 | 2.805502e-49 | -8.615850e-47 |
Msa0049650 | Msa0638320 | -0.809648 | 1.705809e-50 | -8.615850e-47 |
Msa0049650 | Msa0642650 | -0.812200 | 4.777591e-51 | -8.615850e-47 |
Msa0049650 | Msa0646640 | -0.812715 | 3.687170e-51 | -8.615850e-47 |
Msa0049650 | Msa0647450 | 0.830881 | 2.287082e-55 | -8.615850e-47 |
Msa0049650 | Msa0654760 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
Msa0049650 | Msa0655660 | 0.824826 | 6.540047e-54 | -8.615850e-47 |
Msa0049650 | Msa0657670 | -0.824010 | 1.017572e-53 | -8.615850e-47 |
Msa0049650 | Msa0661190 | 0.844635 | 6.692693e-59 | -8.615850e-47 |
Msa0049650 | Msa0669850 | -0.814108 | 1.822531e-51 | -8.615850e-47 |
Msa0049650 | Msa0677270 | -0.803743 | 3.013970e-49 | -8.615850e-47 |
Msa0049650 | Msa0677820 | -0.817216 | 3.699825e-52 | -8.615850e-47 |
Msa0049650 | Msa0682780 | -0.819729 | 9.966354e-53 | -8.615850e-47 |
Msa0049650 | Msa0692080 | -0.806188 | 9.287644e-50 | -8.615850e-47 |
Msa0049650 | Msa0701030 | -0.811480 | 6.854300e-51 | -8.615850e-47 |
Msa0049650 | Msa0712890 | 0.800739 | 1.251405e-48 | -8.615850e-47 |
Msa0049650 | Msa0713790 | -0.804911 | 1.720602e-49 | -8.615850e-47 |
Msa0049650 | Msa0717920 | 0.866530 | 2.665085e-65 | -8.615850e-47 |
Msa0049650 | Msa0725480 | 0.830344 | 3.097000e-55 | -8.615850e-47 |
Msa0049650 | Msa0734660 | -0.807896 | 4.039447e-50 | -8.615850e-47 |
Msa0049650 | Msa0743260 | -0.815609 | 8.469515e-52 | -8.615850e-47 |
Msa0049650 | Msa0754720 | 0.812291 | 4.565845e-51 | -8.615850e-47 |
Msa0049650 | Msa0756630 | 0.826364 | 2.825607e-54 | -8.615850e-47 |
Msa0049650 | Msa0759030 | -0.800205 | 1.607692e-48 | -8.615850e-47 |
Msa0049650 | Msa0760380 | -0.801466 | 8.886122e-49 | -8.615850e-47 |
Msa0049650 | Msa0766100 | 0.832106 | 1.142460e-55 | -8.615850e-47 |
Msa0049650 | Msa0776220 | -0.807975 | 3.886774e-50 | -8.615850e-47 |
Msa0049650 | Msa0778320 | -0.809710 | 1.653955e-50 | -8.615850e-47 |
Msa0049650 | Msa0785740 | -0.816966 | 4.211388e-52 | -8.615850e-47 |
Msa0049650 | Msa0790390 | 0.829798 | 4.207061e-55 | -8.615850e-47 |
Msa0049650 | Msa0802230 | 0.812983 | 3.221002e-51 | -8.615850e-47 |
Msa0049650 | Msa0813320 | 0.857295 | 1.799455e-62 | -8.615850e-47 |
Msa0049650 | Msa0813720 | -0.830759 | 2.451067e-55 | -8.615850e-47 |
Msa0049650 | Msa0837660 | -0.810270 | 1.252772e-50 | -8.615850e-47 |
Msa0049650 | Msa0854570 | -0.800863 | 1.180215e-48 | -8.615850e-47 |
Msa0049650 | Msa0867050 | 0.882678 | 8.517865e-71 | -8.615850e-47 |
Msa0049650 | Msa0874760 | -0.801775 | 7.680536e-49 | -8.615850e-47 |
Msa0049650 | Msa0883030 | -0.800484 | 1.410131e-48 | -8.615850e-47 |
Msa0049650 | Msa0888580 | -0.806755 | 7.050553e-50 | -8.615850e-47 |
Msa0049650 | Msa0890250 | -0.822682 | 2.078579e-53 | -8.615850e-47 |
Msa0049650 | Msa0893480 | 0.821724 | 3.467858e-53 | -8.615850e-47 |
Msa0049650 | Msa0907700 | -0.802031 | 6.803473e-49 | -8.615850e-47 |
Msa0049650 | Msa0925160 | -0.808542 | 2.942953e-50 | -8.615850e-47 |
Msa0049650 | Msa0930320 | 0.817837 | 2.680297e-52 | -8.615850e-47 |
Msa0049650 | Msa0937810 | -0.802528 | 5.374458e-49 | -8.615850e-47 |
Msa0049650 | Msa0953150 | -0.812954 | 3.268439e-51 | -8.615850e-47 |
Msa0049650 | Msa0967650 | 0.834536 | 2.831541e-56 | -8.615850e-47 |
Msa0049650 | Msa0970570 | 0.830906 | 2.256049e-55 | -8.615850e-47 |
Msa0049650 | Msa0980500 | -0.807634 | 4.592779e-50 | -8.615850e-47 |
Msa0049650 | Msa0981820 | 0.804284 | 2.325608e-49 | -8.615850e-47 |
Msa0049650 | Msa1004900 | 0.830546 | 2.762826e-55 | -8.615850e-47 |
Msa0049650 | Msa1007610 | 0.805156 | 1.529591e-49 | -8.615850e-47 |
Msa0049650 | Msa1038050 | -0.824370 | 8.374055e-54 | -8.615850e-47 |
Msa0049650 | Msa1040120 | -0.812615 | 3.877199e-51 | -8.615850e-47 |
Msa0049650 | Msa1040830 | -0.831352 | 1.752195e-55 | -8.615850e-47 |
Msa0049650 | Msa1044340 | -0.810320 | 1.222040e-50 | -8.615850e-47 |
Msa0049650 | Msa1072460 | 0.838470 | 2.822205e-57 | -8.615850e-47 |
Msa0049650 | Msa1076570 | 0.801541 | 8.576497e-49 | -8.615850e-47 |
Msa0049650 | Msa1079370 | 0.831832 | 1.334593e-55 | -8.615850e-47 |
Msa0049650 | Msa1082700 | -0.861296 | 1.133481e-63 | -8.615850e-47 |
Msa0049650 | Msa1083150 | -0.816693 | 4.848704e-52 | -8.615850e-47 |
Msa0049650 | Msa1094420 | -0.807611 | 4.645306e-50 | -8.615850e-47 |
Msa0049650 | Msa1127890 | -0.801992 | 6.929243e-49 | -8.615850e-47 |
Msa0049650 | Msa1128160 | -0.803473 | 3.428108e-49 | -8.615850e-47 |
Msa0049650 | Msa1129560 | -0.854151 | 1.490027e-61 | -8.615850e-47 |
Msa0049650 | Msa1129720 | -0.817676 | 2.915044e-52 | -8.615850e-47 |
Msa0049650 | Msa1139810 | -0.819708 | 1.007973e-52 | -8.615850e-47 |
Msa0049650 | Msa1165360 | -0.800403 | 1.465388e-48 | -8.615850e-47 |
Msa0049650 | Msa1165870 | -0.806964 | 6.368211e-50 | -8.615850e-47 |
Msa0049650 | Msa1166010 | -0.809309 | 2.016271e-50 | -8.615850e-47 |
Msa0049650 | Msa1166140 | 0.811132 | 8.158112e-51 | -8.615850e-47 |
Msa0049650 | Msa1166240 | 0.821506 | 3.894208e-53 | -8.615850e-47 |
Msa0049650 | Msa1168680 | 0.830526 | 2.794373e-55 | -8.615850e-47 |
Msa0049650 | Msa1171690 | -0.839080 | 1.962176e-57 | -8.615850e-47 |
Msa0049650 | Msa1174010 | -0.819304 | 1.245713e-52 | -8.615850e-47 |
Msa0049650 | Msa1181550 | -0.800653 | 1.302584e-48 | -8.615850e-47 |
Msa0049650 | Msa1193950 | 0.851788 | 7.063917e-61 | -8.615850e-47 |
Msa0049650 | Msa1200880 | 0.891177 | 5.041050e-74 | -8.615850e-47 |
Msa0049650 | Msa1201430 | 0.824792 | 6.661930e-54 | -8.615850e-47 |
Msa0049650 | Msa1208890 | 0.818613 | 1.788986e-52 | -8.615850e-47 |
Msa0049650 | Msa1210770 | -0.802707 | 4.936637e-49 | -8.615850e-47 |
Msa0049650 | Msa1221560 | -0.801399 | 9.172011e-49 | -8.615850e-47 |
Msa0049650 | Msa1222970 | -0.812119 | 4.977195e-51 | -8.615850e-47 |
Msa0049650 | Msa1223840 | -0.800411 | 1.459514e-48 | -8.615850e-47 |
Msa0049650 | Msa1224670 | -0.823818 | 1.128514e-53 | -8.615850e-47 |
Msa0049650 | Msa1243170 | -0.812839 | 3.463398e-51 | -8.615850e-47 |
Msa0049650 | Msa1245940 | 0.824896 | 6.294234e-54 | -8.615850e-47 |
Msa0049650 | Msa1246530 | 0.805250 | 1.461500e-49 | -8.615850e-47 |
Msa0049650 | Msa1249200 | 0.846664 | 1.884767e-59 | -8.615850e-47 |
Msa0049650 | Msa1249640 | 0.814845 | 1.252115e-51 | -8.615850e-47 |
Msa0049650 | Msa1249870 | -0.800426 | 1.449409e-48 | -8.615850e-47 |
Msa0049650 | Msa1253930 | 0.911094 | 8.971577e-83 | -8.615850e-47 |
Msa0049650 | Msa1254370 | 0.830705 | 2.526387e-55 | -8.615850e-47 |
Msa0049650 | Msa1259070 | 0.822903 | 1.846753e-53 | -8.615850e-47 |
Msa0049650 | Msa1263030 | -0.809615 | 1.733196e-50 | -8.615850e-47 |
Msa0049650 | Msa1264020 | -0.825781 | 3.887989e-54 | -8.615850e-47 |
Msa0049650 | Msa1269580 | 0.831413 | 1.693196e-55 | -8.615850e-47 |
Msa0049650 | Msa1283170 | -0.814165 | 1.770447e-51 | -8.615850e-47 |
Msa0049650 | Msa1288170 | -0.822565 | 2.212632e-53 | -8.615850e-47 |
Msa0049650 | Msa1288190 | -0.818403 | 1.996323e-52 | -8.615850e-47 |
Msa0049650 | Msa1294610 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
Msa0049650 | Msa1304820 | -0.812823 | 3.491698e-51 | -8.615850e-47 |
Msa0049650 | Msa1307010 | 0.818082 | 2.360360e-52 | -8.615850e-47 |
Msa0049650 | Msa1307660 | 0.915722 | 4.197279e-85 | -8.615850e-47 |
Msa0049650 | Msa1337090 | -0.806841 | 6.763471e-50 | -8.615850e-47 |
Msa0049650 | Msa1359080 | 0.806239 | 9.060498e-50 | -8.615850e-47 |
Msa0049650 | Msa1375260 | 0.830915 | 2.243578e-55 | -8.615850e-47 |
Msa0049650 | Msa1376090 | 0.804069 | 2.578456e-49 | -8.615850e-47 |
Msa0049650 | Msa1377540 | 0.805505 | 1.292648e-49 | -8.615850e-47 |
Msa0049650 | Msa1385620 | -0.800028 | 1.746245e-48 | -8.615850e-47 |
Msa0049650 | Msa1385900 | -0.815112 | 1.092084e-51 | -8.615850e-47 |
Msa0049650 | Msa1386110 | 0.809241 | 2.085123e-50 | -8.615850e-47 |
Msa0049650 | Msa1391360 | 0.808439 | 3.095371e-50 | -8.615850e-47 |
Msa0049650 | Msa1395230 | 0.872423 | 3.216324e-67 | -8.615850e-47 |
Msa0049650 | Msa1396750 | 0.868460 | 6.424456e-66 | -8.615850e-47 |
Msa0049650 | Msa1397810 | -0.817996 | 2.467958e-52 | -8.615850e-47 |
Msa0049650 | Msa1400610 | 0.816332 | 5.840013e-52 | -8.615850e-47 |
Msa0049650 | Msa1403580 | 0.824429 | 8.110184e-54 | -8.615850e-47 |
Msa0049650 | Msa1403930 | 0.858690 | 6.927535e-63 | -8.615850e-47 |
Msa0049650 | Msa1410430 | 0.883164 | 5.656114e-71 | -8.615850e-47 |
Msa0049650 | Msa1417870 | -0.822765 | 1.988668e-53 | -8.615850e-47 |
Msa0049650 | Msa1418200 | -0.805879 | 1.078804e-49 | -8.615850e-47 |
Msa0049650 | Msa1419800 | 0.817294 | 3.552484e-52 | -8.615850e-47 |
Msa0049650 | Msa1426030 | -0.803294 | 3.733415e-49 | -8.615850e-47 |
Msa0049650 | Msa1427660 | 0.812031 | 5.201329e-51 | -8.615850e-47 |
Msa0049650 | Msa1427760 | -0.800133 | 1.662665e-48 | -8.615850e-47 |
Msa0049650 | Msa1429360 | 0.836184 | 1.085992e-56 | -8.615850e-47 |
Msa0049650 | Msa1443290 | 0.825376 | 4.847823e-54 | -8.615850e-47 |
Msa0049650 | Msa1449250 | 0.824506 | 7.779513e-54 | -8.615850e-47 |
Msa0049650 | Msa1453780 | 0.865830 | 4.441909e-65 | -8.615850e-47 |
Msa0049650 | Msa1454910 | 0.818592 | 1.808861e-52 | -8.615850e-47 |
Msa0049650 | Msa1457440 | -0.824901 | 6.277029e-54 | -8.615850e-47 |
Msa0049650 | Msa1464560 | -0.800703 | 1.272888e-48 | -8.615850e-47 |
Msa0049650 | Msa1464830 | -0.804983 | 1.662361e-49 | -8.615850e-47 |
Msa0049650 | Msa1466300 | -0.811171 | 7.998841e-51 | -8.615850e-47 |
Msa0049650 | Msa1466990 | -0.809513 | 1.823456e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049650 | MtrunA17_Chr4g0000071 | 98.598 | 642 | 9 | 0 | 1 | 642 | 1 | 642 | 0.0 | 1299 |
Msa0049650 | MtrunA17_Chr4g0069011 | 41.132 | 530 | 252 | 15 | 54 | 561 | 11 | 502 | 5.15e-100 | 319 |
Msa0049650 | MtrunA17_Chr8g0380431 | 41.983 | 474 | 222 | 17 | 82 | 520 | 91 | 546 | 1.38e-97 | 309 |
Msa0049650 | MtrunA17_Chr2g0309651 | 65.487 | 226 | 72 | 2 | 341 | 562 | 322 | 545 | 7.23e-96 | 306 |
Msa0049650 | MtrunA17_Chr2g0293641 | 40.307 | 521 | 268 | 17 | 54 | 561 | 46 | 536 | 1.34e-95 | 308 |
Msa0049650 | MtrunA17_Chr7g0253191 | 39.299 | 542 | 244 | 17 | 83 | 563 | 78 | 595 | 6.21e-94 | 303 |
Msa0049650 | MtrunA17_Chr6g0461531 | 46.313 | 339 | 150 | 7 | 252 | 565 | 254 | 585 | 7.85e-87 | 284 |
Msa0049650 | MtrunA17_Chr2g0277111 | 48.837 | 258 | 109 | 5 | 309 | 562 | 215 | 453 | 1.03e-70 | 238 |
Msa0049650 | MtrunA17_Chr2g0292081 | 26.316 | 152 | 101 | 3 | 395 | 542 | 259 | 403 | 3.01e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0049650 | AT3G13060.2 | 56.780 | 590 | 222 | 16 | 36 | 611 | 46 | 616 | 0.0 | 627 |
Msa0049650 | AT3G13060.3 | 56.780 | 590 | 222 | 16 | 36 | 611 | 24 | 594 | 0.0 | 627 |
Msa0049650 | AT3G13060.6 | 56.780 | 590 | 222 | 16 | 36 | 611 | 24 | 594 | 0.0 | 627 |
Msa0049650 | AT3G13060.4 | 56.780 | 590 | 222 | 16 | 36 | 611 | 36 | 606 | 0.0 | 627 |
Msa0049650 | AT3G13060.1 | 55.686 | 510 | 195 | 14 | 36 | 533 | 46 | 536 | 0.0 | 524 |
Msa0049650 | AT3G13060.5 | 50.939 | 426 | 178 | 14 | 36 | 449 | 46 | 452 | 6.31e-124 | 375 |
Msa0049650 | AT3G13460.2 | 40.429 | 559 | 259 | 15 | 58 | 562 | 68 | 606 | 7.97e-117 | 363 |
Msa0049650 | AT3G13460.1 | 40.429 | 559 | 259 | 15 | 58 | 562 | 71 | 609 | 1.02e-116 | 363 |
Msa0049650 | AT3G13460.4 | 40.429 | 559 | 259 | 15 | 58 | 562 | 70 | 608 | 1.15e-116 | 363 |
Msa0049650 | AT1G55500.6 | 41.633 | 502 | 251 | 15 | 85 | 557 | 45 | 533 | 9.07e-105 | 329 |
Msa0049650 | AT1G55500.4 | 41.633 | 502 | 251 | 15 | 85 | 557 | 88 | 576 | 1.51e-104 | 329 |
Msa0049650 | AT1G55500.2 | 41.633 | 502 | 251 | 15 | 85 | 557 | 88 | 576 | 1.61e-104 | 330 |
Msa0049650 | AT1G55500.5 | 41.633 | 502 | 251 | 15 | 85 | 557 | 88 | 576 | 2.40e-104 | 329 |
Msa0049650 | AT1G55500.1 | 41.529 | 484 | 242 | 14 | 103 | 557 | 49 | 520 | 7.06e-100 | 316 |
Msa0049650 | AT1G55500.3 | 41.529 | 484 | 242 | 14 | 103 | 557 | 92 | 563 | 1.81e-99 | 316 |
Msa0049650 | AT1G27960.3 | 57.249 | 269 | 100 | 3 | 333 | 601 | 207 | 460 | 2.76e-99 | 311 |
Msa0049650 | AT1G27960.1 | 57.621 | 269 | 99 | 3 | 333 | 601 | 281 | 534 | 3.20e-98 | 311 |
Msa0049650 | AT3G17330.1 | 39.752 | 483 | 225 | 13 | 86 | 561 | 17 | 440 | 1.90e-96 | 308 |
Msa0049650 | AT3G17330.3 | 39.752 | 483 | 225 | 13 | 86 | 561 | 17 | 440 | 1.90e-96 | 308 |
Msa0049650 | AT5G58190.1 | 39.250 | 507 | 212 | 14 | 75 | 565 | 79 | 505 | 1.53e-92 | 296 |
Msa0049650 | AT5G58190.2 | 39.250 | 507 | 212 | 14 | 75 | 565 | 80 | 506 | 1.67e-92 | 296 |
Msa0049650 | AT5G61020.2 | 58.159 | 239 | 76 | 3 | 340 | 562 | 196 | 426 | 1.37e-90 | 290 |
Msa0049650 | AT5G61020.1 | 58.159 | 239 | 76 | 3 | 340 | 562 | 198 | 428 | 1.68e-90 | 290 |
Msa0049650 | AT3G17330.2 | 59.641 | 223 | 85 | 2 | 344 | 561 | 116 | 338 | 1.62e-89 | 287 |
Msa0049650 | AT1G79270.2 | 60.648 | 216 | 75 | 3 | 356 | 561 | 261 | 476 | 7.18e-86 | 278 |
Msa0049650 | AT1G79270.4 | 60.648 | 216 | 75 | 3 | 356 | 561 | 261 | 476 | 7.18e-86 | 278 |
Msa0049650 | AT1G79270.3 | 60.648 | 216 | 75 | 3 | 356 | 561 | 261 | 476 | 7.18e-86 | 278 |
Msa0049650 | AT1G79270.1 | 60.648 | 216 | 75 | 3 | 356 | 561 | 276 | 491 | 1.41e-85 | 278 |
Msa0049650 | AT3G03950.3 | 54.098 | 244 | 106 | 2 | 328 | 567 | 176 | 417 | 1.56e-85 | 275 |
Msa0049650 | AT3G03950.1 | 54.098 | 244 | 106 | 2 | 328 | 567 | 173 | 414 | 1.81e-85 | 274 |
Msa0049650 | AT3G03950.2 | 54.098 | 244 | 106 | 2 | 328 | 567 | 172 | 413 | 1.83e-85 | 274 |
Msa0049650 | AT1G48110.2 | 58.850 | 226 | 88 | 2 | 341 | 561 | 266 | 491 | 1.46e-84 | 278 |
Msa0049650 | AT1G48110.1 | 58.850 | 226 | 88 | 2 | 341 | 561 | 266 | 491 | 1.46e-84 | 278 |
Msa0049650 | AT1G09810.2 | 54.701 | 234 | 99 | 4 | 337 | 566 | 134 | 364 | 4.21e-81 | 263 |
Msa0049650 | AT1G09810.1 | 54.701 | 234 | 99 | 4 | 337 | 566 | 176 | 406 | 6.85e-81 | 264 |
Msa0049650 | AT1G09810.3 | 54.701 | 234 | 99 | 4 | 337 | 566 | 157 | 387 | 7.72e-81 | 263 |
Msa0049650 | AT3G13460.3 | 33.857 | 446 | 221 | 15 | 58 | 449 | 71 | 496 | 1.60e-51 | 186 |
Msa0049650 | AT1G27960.2 | 54.237 | 118 | 41 | 2 | 333 | 450 | 281 | 385 | 8.16e-29 | 120 |
Msa0049650 | AT4G11970.5 | 31.169 | 154 | 94 | 3 | 395 | 543 | 72 | 218 | 3.75e-16 | 81.3 |
Msa0049650 | AT4G11970.2 | 31.169 | 154 | 94 | 3 | 395 | 543 | 72 | 218 | 5.94e-16 | 80.5 |
Msa0049650 | AT4G11970.3 | 31.169 | 154 | 94 | 3 | 395 | 543 | 72 | 218 | 7.51e-16 | 80.5 |
Msa0049650 | AT4G11970.1 | 31.169 | 154 | 94 | 3 | 395 | 543 | 72 | 218 | 4.57e-15 | 78.6 |
Msa0049650 | AT4G11970.4 | 31.169 | 154 | 94 | 3 | 395 | 543 | 72 | 218 | 4.57e-15 | 78.6 |
Find 216 sgRNAs with CRISPR-Local
Find 691 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGGAGGCTCGGCCATTTC+TGG | 0.126584 | 1_2:-3057917 | Msa0049650:CDS |
ATTGGCTCTGTCAGGTCATT+TGG | 0.209578 | 1_2:-3058710 | Msa0049650:CDS |
ATCTGATCCTTCATGTTATC+TGG | 0.270592 | 1_2:+3063890 | None:intergenic |
TTATGCAAAACCACCTCTTT+TGG | 0.282191 | 1_2:+3054868 | None:intergenic |
CAATTACAATTTCAGTTTCA+TGG | 0.283425 | 1_2:-3064234 | Msa0049650:exon |
ACCGGGTTTAAATACATTAC+TGG | 0.284768 | 1_2:+3055067 | None:intergenic |
TATCCTTCATATGTCAATAA+TGG | 0.290554 | 1_2:-3059315 | Msa0049650:CDS |
ACAAGTCAGTCAGGATCTTT+TGG | 0.312127 | 1_2:-3061149 | Msa0049650:CDS |
CAGCGATCTTTGTATGGGTT+TGG | 0.314350 | 1_2:-3057992 | Msa0049650:CDS |
TTGACAAGAGCGTGGACTTC+TGG | 0.317782 | 1_2:-3056742 | Msa0049650:CDS |
GAATTAAGATATGGTAAGTT+TGG | 0.318055 | 1_2:+3059004 | None:intergenic |
TTGGCTCTGTCAGGTCATTT+GGG | 0.318903 | 1_2:-3058709 | Msa0049650:CDS |
CATCAACAGCGATCTTTGTA+TGG | 0.319503 | 1_2:-3057998 | Msa0049650:CDS |
GTAAGCTCTGGCTGAGAAAC+TGG | 0.323636 | 1_2:+3058974 | None:intergenic |
CCTCTGCCTTTCTGAAGGTT+TGG | 0.326875 | 1_2:+3058772 | None:intergenic |
ATCCTTCATATGTCAATAAT+GGG | 0.329319 | 1_2:-3059314 | Msa0049650:CDS |
GCCTGGGGTGCATACACATT+GGG | 0.346366 | 1_2:+3061098 | None:intergenic |
TCTAACCCCGGTTCTAGCTT+TGG | 0.348886 | 1_2:-3057935 | Msa0049650:CDS |
CATCTTGTTTCTCCTTTGCT+TGG | 0.349280 | 1_2:+3057525 | None:intergenic |
CAGGCCCAGGCTTTCTACTA+TGG | 0.352152 | 1_2:-3061080 | Msa0049650:CDS |
ATTAAAATCATAGGGTCATT+GGG | 0.356009 | 1_2:-3054895 | Msa0049650:three_prime_UTR |
TCAACAGTCTTGCCACTAAC+TGG | 0.357017 | 1_2:+3055010 | None:intergenic |
CATTAAAATCATAGGGTCAT+TGG | 0.360020 | 1_2:-3054896 | Msa0049650:three_prime_UTR |
GAAGGCAAAGGCGAGGTAAC+CGG | 0.360735 | 1_2:+3059106 | None:intergenic |
TGTGATGCCATTAAAATCAT+AGG | 0.372226 | 1_2:-3054904 | Msa0049650:three_prime_UTR |
AGAGCATTAAATATGGTGTC+TGG | 0.382981 | 1_2:-3057592 | Msa0049650:CDS |
TTGAAATCAGTGGCAAAATC+TGG | 0.385317 | 1_2:+3057665 | None:intergenic |
GGCGAGGTAACCGGGGAATA+TGG | 0.385914 | 1_2:+3059115 | None:intergenic |
GAATCTCAACAAGGATTTGA+TGG | 0.390754 | 1_2:-3058827 | Msa0049650:CDS |
TTGTAATAAGGTGGGGTGTA+TGG | 0.390994 | 1_2:+3059043 | None:intergenic |
TCATGATGCGTAAACGTAAA+CGG | 0.396492 | 1_2:+3064392 | None:intergenic |
CATAGTAGAAAGCCTGGGCC+TGG | 0.397210 | 1_2:+3061081 | None:intergenic |
GGAACCAGATGGTTGTAATA+AGG | 0.400527 | 1_2:+3059031 | None:intergenic |
GTTCATAAGAGCATTAAATA+TGG | 0.400693 | 1_2:-3057599 | Msa0049650:CDS |
TCTAACTTCCTGTTTCCATT+TGG | 0.400771 | 1_2:+3057560 | None:intergenic |
TCTGAAAATAACGCTATTGA+TGG | 0.400801 | 1_2:-3057740 | Msa0049650:CDS |
CTGCCTTTCTGAAGGTTTGG+AGG | 0.400845 | 1_2:+3058775 | None:intergenic |
CGAGCCTCCAAAGCTAGAAC+CGG | 0.407892 | 1_2:+3057928 | None:intergenic |
GGATCCGGTTCAAACCCTTA+TGG | 0.407920 | 1_2:-3057971 | Msa0049650:CDS |
CCTTGCCTTTCGTTCTTGCA+TGG | 0.410423 | 1_2:+3055271 | None:intergenic |
TCTGTTCCTCAACAGCCAAT+TGG | 0.412741 | 1_2:-3058728 | Msa0049650:CDS |
CTGGCCTTAGTGCTAATGAT+AGG | 0.414141 | 1_2:-3057898 | Msa0049650:CDS |
AGGAGGCTGTGATGGTGGTT+GGG | 0.419576 | 1_2:+3064205 | None:intergenic |
CTGAAGGAACCAGGGGCTAC+AGG | 0.423084 | 1_2:+3058857 | None:intergenic |
GAGGAGGCTGTGATGGTGGT+TGG | 0.428984 | 1_2:+3064204 | None:intergenic |
TAATGCCTACTGGATTAGTT+GGG | 0.430213 | 1_2:-3055235 | Msa0049650:CDS |
TCTTTGTATGGGTTTGGATC+CGG | 0.431719 | 1_2:-3057986 | Msa0049650:CDS |
ATAATGCCTACTGGATTAGT+TGG | 0.431965 | 1_2:-3055236 | Msa0049650:CDS |
TATGGTCCATATGGCATTTG+TGG | 0.432804 | 1_2:+3059133 | None:intergenic |
AAAGAATCGATGTGAATGAA+TGG | 0.436479 | 1_2:-3064303 | Msa0049650:five_prime_UTR |
ATATGCAAAGGTGTAATGTA+TGG | 0.439051 | 1_2:+3054781 | None:intergenic |
AACAGCCAATTGGCTCTGTC+AGG | 0.440837 | 1_2:-3058718 | Msa0049650:CDS |
CCTCGCCTTTGCCTTCTGTA+GGG | 0.441420 | 1_2:-3059099 | Msa0049650:CDS |
CGGTTCTAGCTTTGGAGGCT+CGG | 0.441575 | 1_2:-3057927 | Msa0049650:CDS |
ATAGTAGAAAGCCTGGGCCT+GGG | 0.443380 | 1_2:+3061082 | None:intergenic |
AAAATAGCAGACGGCACGGC+AGG | 0.444683 | 1_2:-3057859 | Msa0049650:CDS |
GTCATTGGGGTTTCCAAAAG+AGG | 0.447846 | 1_2:-3054881 | Msa0049650:three_prime_UTR |
CTTCAACGCAAACCAGTTAG+TGG | 0.448154 | 1_2:-3055022 | Msa0049650:exon |
AAGGCAAAGGCGAGGTAACC+GGG | 0.449724 | 1_2:+3059107 | None:intergenic |
GCCGGTTGAGTGATTCATCT+TGG | 0.454411 | 1_2:+3057687 | None:intergenic |
AGGTCATTTGGGCTGAGTGC+TGG | 0.455482 | 1_2:-3058698 | Msa0049650:CDS |
CGGGATATCACAAGTCAGTC+AGG | 0.458558 | 1_2:-3061158 | Msa0049650:CDS |
GAGAGATAGCCTCTACCATA+AGG | 0.461221 | 1_2:+3057956 | None:intergenic |
CTAGTACACCAAATGGAAAC+AGG | 0.461821 | 1_2:-3057568 | Msa0049650:CDS |
ATTAGCACTAAGGCCAGAAA+TGG | 0.464972 | 1_2:+3057904 | None:intergenic |
GGCCTGGGGTGCATACACAT+TGG | 0.466957 | 1_2:+3061097 | None:intergenic |
TTCATTACCCGATGCATAGC+CGG | 0.468781 | 1_2:+3054978 | None:intergenic |
TGTGTATGCACCCCAGGCCC+AGG | 0.472090 | 1_2:-3061093 | Msa0049650:CDS |
GTATCTCGACTGTTGGTAAC+GGG | 0.473588 | 1_2:+3056614 | None:intergenic |
CTTGCTGGTCAATGCCTAGC+AGG | 0.474459 | 1_2:+3058948 | None:intergenic |
ACCGGGGAATATGGTCCATA+TGG | 0.476074 | 1_2:+3059124 | None:intergenic |
GCTTTGAAGCCCTTGGTCCT+CGG | 0.478289 | 1_2:+3057780 | None:intergenic |
CCCACCTTATTACAACCATC+TGG | 0.479406 | 1_2:-3059035 | Msa0049650:CDS |
ATGTGACGAAACTGACTGTT+CGG | 0.481473 | 1_2:+3056662 | None:intergenic |
CAAAGTAGCATAATGCCTAC+TGG | 0.481769 | 1_2:-3055245 | Msa0049650:CDS |
ATTTGGGCTGAGTGCTGGAA+TGG | 0.481872 | 1_2:-3058693 | Msa0049650:intron |
ACATCAGCCGGCTATGCATC+GGG | 0.483474 | 1_2:-3054985 | Msa0049650:three_prime_UTR |
TCCAAGATGAATCACTCAAC+CGG | 0.484917 | 1_2:-3057688 | Msa0049650:CDS |
AACCCCGGTTCTAGCTTTGG+AGG | 0.486883 | 1_2:-3057932 | Msa0049650:CDS |
TTTATTATGTGCCACTTCAC+AGG | 0.487446 | 1_2:+3056692 | None:intergenic |
GGATTTGATGGATCAAGATC+TGG | 0.492200 | 1_2:-3058815 | Msa0049650:CDS |
GTCTGGGCTAGTACACCAAA+TGG | 0.493633 | 1_2:-3057575 | Msa0049650:CDS |
ACCTCGCCTTTGCCTTCTGT+AGG | 0.494810 | 1_2:-3059100 | Msa0049650:CDS |
AAGAATCGATGTGAATGAAT+GGG | 0.495680 | 1_2:-3064302 | Msa0049650:five_prime_UTR |
CACATCAGCCGGCTATGCAT+CGG | 0.496455 | 1_2:-3054986 | Msa0049650:three_prime_UTR |
TTGACAATGGCAATGGCGAA+TGG | 0.496628 | 1_2:-3059344 | Msa0049650:CDS |
TCATGAAAGCTGAAGGAACC+AGG | 0.496773 | 1_2:+3058848 | None:intergenic |
GTTCTGCGGAGTAGCTGAAA+TGG | 0.500293 | 1_2:-3056780 | Msa0049650:CDS |
AACCTCCATAGTAGAAAGCC+TGG | 0.500391 | 1_2:+3061075 | None:intergenic |
AGTATCTCGACTGTTGGTAA+CGG | 0.502066 | 1_2:+3056613 | None:intergenic |
AGAGATAGCCTCTACCATAA+GGG | 0.503704 | 1_2:+3057957 | None:intergenic |
TGAAACTGATACGTCTATCC+TGG | 0.503740 | 1_2:-3055327 | Msa0049650:CDS |
GAGTGATTCATCTTGGAACT+TGG | 0.506959 | 1_2:+3057694 | None:intergenic |
GGAAGCTTTCCTGTAGCCCC+TGG | 0.507011 | 1_2:-3058866 | Msa0049650:CDS |
GGAGTCGGTGAATTAAGATA+TGG | 0.508399 | 1_2:+3058995 | None:intergenic |
TCCCAATGTGTATGCACCCC+AGG | 0.510018 | 1_2:-3061099 | Msa0049650:CDS |
CCTAGCAGGTTAGTAAGCTC+TGG | 0.512997 | 1_2:+3058962 | None:intergenic |
CGATCAAGAGGAGGCTGTGA+TGG | 0.513546 | 1_2:+3064197 | None:intergenic |
TGCATCGGGTAATGAAAGTC+GGG | 0.513855 | 1_2:-3054971 | Msa0049650:three_prime_UTR |
CTCGCCTTTGCCTTCTGTAG+GGG | 0.514641 | 1_2:-3059098 | Msa0049650:CDS |
TTAAGATATGGTAAGTTTGG+AGG | 0.518703 | 1_2:+3059007 | None:intergenic |
CATATCCAGAATGGAAAACA+AGG | 0.521585 | 1_2:+3059164 | None:intergenic |
ATCAACAGCGATCTTTGTAT+GGG | 0.525990 | 1_2:-3057997 | Msa0049650:CDS |
TGAGGAACAGAAGGAGATAG+AGG | 0.527342 | 1_2:+3058740 | None:intergenic |
ATGGTCCATATGGCATTTGT+GGG | 0.529252 | 1_2:+3059134 | None:intergenic |
TTTGAATTACGTACCTGTGG+TGG | 0.529859 | 1_2:+3064172 | None:intergenic |
TTCAACCCACAAATGCCATA+TGG | 0.532099 | 1_2:-3059139 | Msa0049650:CDS |
AGCTCCTATCATTAGCACTA+AGG | 0.532391 | 1_2:+3057894 | None:intergenic |
GATCAAGATCTGGTGGACTC+TGG | 0.533103 | 1_2:-3058805 | Msa0049650:CDS |
ACGGAAGGATAGCTTGCTCT+TGG | 0.533542 | 1_2:+3058905 | None:intergenic |
AGAGGGTAACTTATCTCTGT+TGG | 0.537486 | 1_2:+3055100 | None:intergenic |
AGTCACTAAAATGCCTTCAC+CGG | 0.539918 | 1_2:+3055049 | None:intergenic |
CAACAACTATAGGTCATTCA+CGG | 0.541211 | 1_2:-3061178 | Msa0049650:CDS |
AGATATGGTAAGTTTGGAGG+AGG | 0.541244 | 1_2:+3059010 | None:intergenic |
AATGACCTGACAGAGCCAAT+TGG | 0.541718 | 1_2:+3058713 | None:intergenic |
TCCCAGGGTACAACAACTAT+AGG | 0.542511 | 1_2:-3061188 | Msa0049650:intron |
CTAACTGGTTTGCGTTGAAG+AGG | 0.542548 | 1_2:+3055025 | None:intergenic |
GTCACTAAAATGCCTTCACC+GGG | 0.543120 | 1_2:+3055050 | None:intergenic |
CATAGAAATCAAAATCATCC+AGG | 0.544656 | 1_2:+3055309 | None:intergenic |
TGACAATGGCAATGGCGAAT+GGG | 0.545833 | 1_2:-3059343 | Msa0049650:CDS |
GAGCATTAAATATGGTGTCT+GGG | 0.546855 | 1_2:-3057591 | Msa0049650:CDS |
AAAGACCTCTGCCTTTCTGA+AGG | 0.547378 | 1_2:+3058767 | None:intergenic |
TTGAGATTCATGAAAGCTGA+AGG | 0.548335 | 1_2:+3058841 | None:intergenic |
ATGCATCGGGTAATGAAAGT+CGG | 0.548861 | 1_2:-3054972 | Msa0049650:three_prime_UTR |
AGGAGTTCTTCTGACAGTAC+TGG | 0.550086 | 1_2:-3055200 | Msa0049650:CDS |
ACGCTCTTGTCAAAATTGAC+AGG | 0.553986 | 1_2:+3056752 | None:intergenic |
TAGTAGAAAGCCTGGGCCTG+GGG | 0.555205 | 1_2:+3061083 | None:intergenic |
ACCAGATGGTTGTAATAAGG+TGG | 0.555442 | 1_2:+3059034 | None:intergenic |
ACACCTTTGCATATTTGAGT+AGG | 0.555703 | 1_2:-3054772 | Msa0049650:three_prime_UTR |
TATGCAAAGGTGTAATGTAT+GGG | 0.556915 | 1_2:+3054782 | None:intergenic |
AGAGCAAGCTATCCTTCCGT+TGG | 0.557743 | 1_2:-3058902 | Msa0049650:CDS |
GGTTCAAACCCTTATGGTAG+AGG | 0.558356 | 1_2:-3057965 | Msa0049650:CDS |
GTGATGCCATTAAAATCATA+GGG | 0.561994 | 1_2:-3054903 | Msa0049650:three_prime_UTR |
GAGCCTCCAAAGCTAGAACC+GGG | 0.562520 | 1_2:+3057929 | None:intergenic |
TCGCCTTTGCCTTCTGTAGG+GGG | 0.562582 | 1_2:-3059097 | Msa0049650:CDS |
CCAGATGGTTGTAATAAGGT+GGG | 0.563318 | 1_2:+3059035 | None:intergenic |
GAAGGCCATGCAAGAACGAA+AGG | 0.564589 | 1_2:-3055276 | Msa0049650:CDS |
TCTACCATAAGGGTTTGAAC+CGG | 0.565189 | 1_2:+3057967 | None:intergenic |
TTGAATTACGTACCTGTGGT+GGG | 0.566736 | 1_2:+3064173 | None:intergenic |
CCTCTTGATCGTCCCACCAC+AGG | 0.566829 | 1_2:-3064185 | Msa0049650:intron |
TTCAGGTGAAATTGCAACAA+GGG | 0.568232 | 1_2:-3055379 | Msa0049650:intron |
TACCAACAGTCGAGATACTC+AGG | 0.568743 | 1_2:-3056609 | Msa0049650:CDS |
GGTTTAAATACATTACTGGT+GGG | 0.569305 | 1_2:+3055071 | None:intergenic |
TCCTCTAGCAAAAGATCCAA+CGG | 0.572325 | 1_2:+3058886 | None:intergenic |
AACAACTATAGGTCATTCAC+GGG | 0.573388 | 1_2:-3061177 | Msa0049650:CDS |
GGGTTTAAATACATTACTGG+TGG | 0.576335 | 1_2:+3055070 | None:intergenic |
GGTTGAAGCCATATCCAGAA+TGG | 0.576400 | 1_2:+3059155 | None:intergenic |
CCAAACCTTCAGAAAGGCAG+AGG | 0.578069 | 1_2:-3058772 | Msa0049650:CDS |
GGCAGCAAGATAAGTGGAGT+GGG | 0.578602 | 1_2:-3056721 | Msa0049650:CDS |
AATGTATTTAAACCCGGTGA+AGG | 0.581610 | 1_2:-3055062 | Msa0049650:CDS |
ACTTCTGGCAGCAAGATAAG+TGG | 0.581969 | 1_2:-3056727 | Msa0049650:CDS |
CGTTATTGTTGTCGTCCAAG+CGG | 0.588897 | 1_2:+3055135 | None:intergenic |
TAACCTACTCAAATATGCAA+AGG | 0.591628 | 1_2:+3054769 | None:intergenic |
GGGTGTATGGAAATTGCTGA+GGG | 0.592173 | 1_2:+3059056 | None:intergenic |
ACAGAGCCAATTGGCTGTTG+AGG | 0.593080 | 1_2:+3058722 | None:intergenic |
ATTGGCTGTTGAGGAACAGA+AGG | 0.595584 | 1_2:+3058731 | None:intergenic |
CTCCTGAGTATCTCGACTGT+TGG | 0.599567 | 1_2:+3056607 | None:intergenic |
AAGATCTGGTGGACTCTGGT+CGG | 0.599715 | 1_2:-3058801 | Msa0049650:CDS |
GCCATATGGACCATATTCCC+CGG | 0.599829 | 1_2:-3059125 | Msa0049650:CDS |
ATTGGGGTTTCCAAAAGAGG+TGG | 0.600341 | 1_2:-3054878 | Msa0049650:three_prime_UTR |
AGACTGTTGATCACATCAGC+CGG | 0.600928 | 1_2:-3054997 | Msa0049650:three_prime_UTR |
TGCTGCATATTGCCAAGCAA+AGG | 0.601148 | 1_2:-3057537 | Msa0049650:CDS |
GTGAGCAAAACCGAGGACCA+AGG | 0.601850 | 1_2:-3057790 | Msa0049650:CDS |
TGCGGAGTAGCTGAAATGGT+TGG | 0.602747 | 1_2:-3056776 | Msa0049650:CDS |
GCCCAGGCTTTCTACTATGG+AGG | 0.604151 | 1_2:-3061077 | Msa0049650:intron |
TTTCTATGAAGATCGGCAGA+AGG | 0.604380 | 1_2:-3055294 | Msa0049650:CDS |
GTGGGCAGTTTCCTGTGAAG+TGG | 0.604937 | 1_2:-3056703 | Msa0049650:CDS |
CCAGAGCTTACTAACCTGCT+AGG | 0.605573 | 1_2:-3058962 | Msa0049650:CDS |
AATGCCTACTGGATTAGTTG+GGG | 0.605874 | 1_2:-3055234 | Msa0049650:CDS |
CCATGCAAGAACGAAAGGCA+AGG | 0.609460 | 1_2:-3055271 | Msa0049650:CDS |
TGAGCAAAACCGAGGACCAA+GGG | 0.610520 | 1_2:-3057789 | Msa0049650:CDS |
AATGCTAGTGCTCAGTTCTG+CGG | 0.610616 | 1_2:-3056794 | Msa0049650:CDS |
ATTCCTCCAAACCTTCAGAA+AGG | 0.611580 | 1_2:-3058778 | Msa0049650:CDS |
ACCTCCATAGTAGAAAGCCT+GGG | 0.612346 | 1_2:+3061076 | None:intergenic |
TGCCTACTGGATTAGTTGGG+GGG | 0.613757 | 1_2:-3055232 | Msa0049650:CDS |
AGAGGCTATCTCTCTAACCC+CGG | 0.614586 | 1_2:-3057947 | Msa0049650:CDS |
CTTGGCATCCTTGAAATCAG+TGG | 0.615695 | 1_2:+3057655 | None:intergenic |
GGGGTGTATGGAAATTGCTG+AGG | 0.615889 | 1_2:+3059055 | None:intergenic |
TTTCTCTTGAAAATAGCAGA+CGG | 0.616582 | 1_2:-3057868 | Msa0049650:CDS |
TTACTGGTGGGAACATCAGA+GGG | 0.616730 | 1_2:+3055083 | None:intergenic |
CCTGTGGTGGGACGATCAAG+AGG | 0.618602 | 1_2:+3064185 | None:intergenic |
AAATAGCAGACGGCACGGCA+GGG | 0.619949 | 1_2:-3057858 | Msa0049650:CDS |
ATTACTGGTGGGAACATCAG+AGG | 0.620253 | 1_2:+3055082 | None:intergenic |
AGCTTTCATGAATCTCAACA+AGG | 0.620909 | 1_2:-3058836 | Msa0049650:CDS |
TGGGGTGCATACACATTGGG+AGG | 0.622796 | 1_2:+3061101 | None:intergenic |
AATCAGTGGCAAAATCTGGC+CGG | 0.622969 | 1_2:+3057669 | None:intergenic |
TTAAAATCATAGGGTCATTG+GGG | 0.625569 | 1_2:-3054894 | Msa0049650:three_prime_UTR |
TAACATGAAGGATCAGATTG+TGG | 0.625767 | 1_2:-3063885 | Msa0049650:intron |
CTAGCAAAAGATCCAACGGA+AGG | 0.626823 | 1_2:+3058890 | None:intergenic |
ACCAGTAATGTATTTAAACC+CGG | 0.627473 | 1_2:-3055068 | Msa0049650:CDS |
AACTCAACCAGATAACATGA+AGG | 0.628484 | 1_2:-3063897 | Msa0049650:CDS |
TCTGGCTGAGAAACTGGAGT+CGG | 0.633808 | 1_2:+3058980 | None:intergenic |
GCAAAGGTGTAATGTATGGG+AGG | 0.635608 | 1_2:+3054785 | None:intergenic |
TGGCAGCAAGATAAGTGGAG+TGG | 0.635971 | 1_2:-3056722 | Msa0049650:CDS |
TCCTTCATATGTCAATAATG+GGG | 0.636508 | 1_2:-3059313 | Msa0049650:CDS |
TTTGATGGATCAAGATCTGG+TGG | 0.636647 | 1_2:-3058812 | Msa0049650:CDS |
CCTTCATATGTCAATAATGG+GGG | 0.641399 | 1_2:-3059312 | Msa0049650:CDS |
CTTGAAAATAGCAGACGGCA+CGG | 0.643405 | 1_2:-3057863 | Msa0049650:CDS |
CATGAAAGCTGAAGGAACCA+GGG | 0.645158 | 1_2:+3058849 | None:intergenic |
TACACATTGGGAGGGTACAG+AGG | 0.648042 | 1_2:+3061110 | None:intergenic |
TTTCAGGTGAAATTGCAACA+AGG | 0.653357 | 1_2:-3055380 | Msa0049650:intron |
CCCTACAGAAGGCAAAGGCG+AGG | 0.658818 | 1_2:+3059099 | None:intergenic |
ATGCCTACTGGATTAGTTGG+GGG | 0.665482 | 1_2:-3055233 | Msa0049650:CDS |
AGCCTCCAAAGCTAGAACCG+GGG | 0.665960 | 1_2:+3057930 | None:intergenic |
TCAAGAGGAGGCTGTGATGG+TGG | 0.676241 | 1_2:+3064200 | None:intergenic |
CAGATGGTTGTAATAAGGTG+GGG | 0.681497 | 1_2:+3059036 | None:intergenic |
ATGAAAGCTGAAGGAACCAG+GGG | 0.687499 | 1_2:+3058850 | None:intergenic |
ATATCCAGAATGGAAAACAA+GGG | 0.689183 | 1_2:+3059165 | None:intergenic |
AGTTTGGAGGAGGAACCAGA+TGG | 0.690239 | 1_2:+3059020 | None:intergenic |
AGGCAAAGGCGAGGTAACCG+GGG | 0.693351 | 1_2:+3059108 | None:intergenic |
GTGGTGGGACGATCAAGAGG+AGG | 0.694057 | 1_2:+3064188 | None:intergenic |
GGGGTGCATACACATTGGGA+GGG | 0.699507 | 1_2:+3061102 | None:intergenic |
GGTGTATGGAAATTGCTGAG+GGG | 0.708381 | 1_2:+3059057 | None:intergenic |
ATCCTCAGTGAGCAAAACCG+AGG | 0.723529 | 1_2:-3057797 | Msa0049650:CDS |
TTACAATTTCAGTTTCATGG+CGG | 0.730277 | 1_2:-3064231 | Msa0049650:exon |
CAACAGTCGAGATACTCAGG+AGG | 0.750598 | 1_2:-3056606 | Msa0049650:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTTTTCTATAAAGAAT+TGG | - | chr1_2:3054774-3054793 | Msa0049650:three_prime_UTR | 10.0% |
!! | ATGAAATTAATAAAGTTATA+TGG | - | chr1_2:3055802-3055821 | Msa0049650:intron | 10.0% |
!! | TATATTACAAAATTTATTGT+TGG | + | chr1_2:3059310-3059329 | None:intergenic | 10.0% |
!! | AAGAATTATATATAAAAATG+AGG | + | chr1_2:3059386-3059405 | None:intergenic | 10.0% |
!!! | AAAAATTTCAAAAAAAGTTT+TGG | + | chr1_2:3063446-3063465 | None:intergenic | 10.0% |
!!! | TTGAAATTTTTCTTATATTA+AGG | - | chr1_2:3063455-3063474 | Msa0049650:intron | 10.0% |
!!! | TGAATTTTGAGATTTTTTAT+AGG | - | chr1_2:3055712-3055731 | Msa0049650:intron | 15.0% |
!!! | GAATTTTGAGATTTTTTATA+GGG | - | chr1_2:3055713-3055732 | Msa0049650:intron | 15.0% |
!!! | TATTTAAAGTTAAACTAGTT+TGG | - | chr1_2:3056533-3056552 | Msa0049650:intron | 15.0% |
!! | CAAAATAAAATAAAAAGCAA+GGG | + | chr1_2:3056845-3056864 | None:intergenic | 15.0% |
!! | ACAAAATAAAATAAAAAGCA+AGG | + | chr1_2:3056846-3056865 | None:intergenic | 15.0% |
!! | GTACATATACATTAAAAAAA+TGG | - | chr1_2:3057718-3057737 | Msa0049650:CDS | 15.0% |
!!! | TTATTTTTTTGGAGATTTTT+GGG | + | chr1_2:3059181-3059200 | None:intergenic | 15.0% |
!!! | TTTATTTTTTTGGAGATTTT+TGG | + | chr1_2:3059182-3059201 | None:intergenic | 15.0% |
!! | ATTATATATAAAAATGAGGA+GGG | + | chr1_2:3059382-3059401 | None:intergenic | 15.0% |
!! | AATTATATATAAAAATGAGG+AGG | + | chr1_2:3059383-3059402 | None:intergenic | 15.0% |
!!! | TGCTAAATTTTAATTCATTT+TGG | - | chr1_2:3059418-3059437 | Msa0049650:intron | 15.0% |
!!! | AATATGTAGTTTTAATGAAT+GGG | + | chr1_2:3059607-3059626 | None:intergenic | 15.0% |
!!! | TAATATGTAGTTTTAATGAA+TGG | + | chr1_2:3059608-3059627 | None:intergenic | 15.0% |
!!! | TTTTTTCCAACTTTTATATT+AGG | - | chr1_2:3059923-3059942 | Msa0049650:intron | 15.0% |
!!! | TTTTTCCAACTTTTATATTA+GGG | - | chr1_2:3059924-3059943 | Msa0049650:intron | 15.0% |
!!! | AATGGTAATATAACTTTTTT+GGG | + | chr1_2:3060919-3060938 | None:intergenic | 15.0% |
!!! | AAATGGTAATATAACTTTTT+TGG | + | chr1_2:3060920-3060939 | None:intergenic | 15.0% |
!! | TTATTACACTATATAAAACA+TGG | + | chr1_2:3060992-3061011 | None:intergenic | 15.0% |
!!! | TTTTGTATAAAACTAAATGT+TGG | - | chr1_2:3061786-3061805 | Msa0049650:intron | 15.0% |
!! | TTTGTATAAAACTAAATGTT+GGG | - | chr1_2:3061787-3061806 | Msa0049650:intron | 15.0% |
!! | AAATAAATAGATATTAGGTT+CGG | + | chr1_2:3062902-3062921 | None:intergenic | 15.0% |
!!! | AGTTTCATAGTTTTTAAAAA+TGG | + | chr1_2:3063792-3063811 | None:intergenic | 15.0% |
!! | GATCTAATTAAGACAATAAT+CGG | - | chr1_2:3055066-3055085 | Msa0049650:CDS | 20.0% |
!! | TCAGTAAAAAAAGTTAGTTA+GGG | + | chr1_2:3055282-3055301 | None:intergenic | 20.0% |
!! | ATCAGTAAAAAAAGTTAGTT+AGG | + | chr1_2:3055283-3055302 | None:intergenic | 20.0% |
!!! | AACTAACTTTTTTTACTGAT+AGG | - | chr1_2:3055283-3055302 | Msa0049650:CDS | 20.0% |
!!! | ACTAACTTTTTTTACTGATA+GGG | - | chr1_2:3055284-3055303 | Msa0049650:CDS | 20.0% |
!! | TCATAATTCAAATTCTTGTA+AGG | + | chr1_2:3055314-3055333 | None:intergenic | 20.0% |
!! | AATCCATTAAAAATTGTAAG+AGG | + | chr1_2:3055389-3055408 | None:intergenic | 20.0% |
!! | TGTATTGTATAGTAGATTAA+GGG | + | chr1_2:3055756-3055775 | None:intergenic | 20.0% |
!! | TTGTATTGTATAGTAGATTA+AGG | + | chr1_2:3055757-3055776 | None:intergenic | 20.0% |
!!! | TAGAAACTTGTTCAATTAAA+TGG | - | chr1_2:3056867-3056886 | Msa0049650:intron | 20.0% |
!!! | GTTAGGTTTTTCTTATATTT+TGG | - | chr1_2:3056927-3056946 | Msa0049650:intron | 20.0% |
!! | ACATTAAAAAAATGGTTGAA+AGG | - | chr1_2:3057726-3057745 | Msa0049650:CDS | 20.0% |
!!! | TGTAAGTCTTAATTTTTTGA+AGG | - | chr1_2:3058100-3058119 | Msa0049650:intron | 20.0% |
!! | TGATTGTCAAAATAAATGAT+AGG | - | chr1_2:3058745-3058764 | Msa0049650:CDS | 20.0% |
!! | GTAGAAAATTTATGAAGATT+AGG | - | chr1_2:3059068-3059087 | Msa0049650:CDS | 20.0% |
!!! | TATTTTTTTGGAGATTTTTG+GGG | + | chr1_2:3059180-3059199 | None:intergenic | 20.0% |
!! | ATCTCCAAAAAAATAAAACA+TGG | - | chr1_2:3059185-3059204 | Msa0049650:CDS | 20.0% |
!!! | TGTTCCATGTTTTATTTTTT+TGG | + | chr1_2:3059192-3059211 | None:intergenic | 20.0% |
!! | TTTACCTAGTAAAACATTAT+TGG | - | chr1_2:3059330-3059349 | Msa0049650:CDS | 20.0% |
!!! | ATATGTAGTTTTAATGAATG+GGG | + | chr1_2:3059606-3059625 | None:intergenic | 20.0% |
!! | TTTGTAATTTAAAGATTCTC+TGG | + | chr1_2:3059634-3059653 | None:intergenic | 20.0% |
!! | TTACAATATCAATTGTCTTT+AGG | - | chr1_2:3059668-3059687 | Msa0049650:intron | 20.0% |
!!! | CAAGTTGAAAGTAATTTTTT+TGG | - | chr1_2:3060203-3060222 | Msa0049650:intron | 20.0% |
!!! | TTTTGTCTTGATCAATTAAT+TGG | - | chr1_2:3060844-3060863 | Msa0049650:intron | 20.0% |
!!! | TTAGAAATTTCTTCTGAAAA+TGG | + | chr1_2:3060937-3060956 | None:intergenic | 20.0% |
!!! | AGAAGAAATTTCTAAAATTG+CGG | - | chr1_2:3060942-3060961 | Msa0049650:intron | 20.0% |
!! | TAAAACATGGATATAAACAA+TGG | + | chr1_2:3060979-3060998 | None:intergenic | 20.0% |
!! | TAGTCAGAAAACAAAATTAT+GGG | - | chr1_2:3061073-3061092 | Msa0049650:intron | 20.0% |
!! | AGCAATATGTGATAAATATT+AGG | + | chr1_2:3062224-3062243 | None:intergenic | 20.0% |
!! | AAGACAATAAGCAATATAAA+AGG | + | chr1_2:3062567-3062586 | None:intergenic | 20.0% |
!! | AATAAATAGATATTAGGTTC+GGG | + | chr1_2:3062901-3062920 | None:intergenic | 20.0% |
!! | ACAGGAAATAAATAGATATT+AGG | + | chr1_2:3062907-3062926 | None:intergenic | 20.0% |
!!! | TGTCTTTTAAAGTATGTTAT+CGG | - | chr1_2:3062924-3062943 | Msa0049650:intron | 20.0% |
!!! | ACATAAAGCAAAGAATTTTT+AGG | + | chr1_2:3063092-3063111 | None:intergenic | 20.0% |
!! | TTTATGTTGTGTTTGAATAT+TGG | - | chr1_2:3063105-3063124 | Msa0049650:intron | 20.0% |
!!! | TGGTTTTTCTTCTTATATTA+AGG | + | chr1_2:3063229-3063248 | None:intergenic | 20.0% |
!! | TGTTTCACAATATTCTATAA+GGG | + | chr1_2:3063315-3063334 | None:intergenic | 20.0% |
!! | ATGTTTCACAATATTCTATA+AGG | + | chr1_2:3063316-3063335 | None:intergenic | 20.0% |
!! | AAAAAGACAAACATTAAATG+AGG | - | chr1_2:3063356-3063375 | Msa0049650:intron | 20.0% |
!! | AAAAGACAAACATTAAATGA+GGG | - | chr1_2:3063357-3063376 | Msa0049650:intron | 20.0% |
!!! | ATTTTTCTTATATTAAGGAC+CGG | - | chr1_2:3063460-3063479 | Msa0049650:intron | 20.0% |
!! | CGTTTAATATTCAGAAATAA+AGG | + | chr1_2:3063732-3063751 | None:intergenic | 20.0% |
!!! | ATTTTGATTTCTATGAAGAT+CGG | - | chr1_2:3063831-3063850 | Msa0049650:intron | 20.0% |
! | CAATTACAATTTCAGTTTCA+TGG | - | chr1_2:3054898-3054917 | Msa0049650:three_prime_UTR | 25.0% |
! | CGAATTACTTGATTTAATCT+TGG | - | chr1_2:3055044-3055063 | Msa0049650:CDS | 25.0% |
!!! | TAGATTTGATAACACACTTT+TGG | - | chr1_2:3055335-3055354 | Msa0049650:CDS | 25.0% |
!! | GTACCTCTTACAATTTTTAA+TGG | - | chr1_2:3055383-3055402 | Msa0049650:intron | 25.0% |
!!! | TAAACTTTTTCAACAAGCTA+TGG | + | chr1_2:3055679-3055698 | None:intergenic | 25.0% |
! | ATATGGAGACTAATATTAAG+AGG | - | chr1_2:3055819-3055838 | Msa0049650:intron | 25.0% |
!!! | TATTAAGAGGTACTCTAAAA+AGG | - | chr1_2:3055832-3055851 | Msa0049650:intron | 25.0% |
! | CTTGAAATTAAAACTGAGTT+TGG | - | chr1_2:3056427-3056446 | Msa0049650:intron | 25.0% |
! | AATGAACTAAATTGTGTTCT+TGG | + | chr1_2:3056505-3056524 | None:intergenic | 25.0% |
!!! | GAACACAATTTAGTTCATTT+TGG | - | chr1_2:3056506-3056525 | Msa0049650:intron | 25.0% |
!! | AAAGTTAAACTAGTTTGGTT+AGG | - | chr1_2:3056538-3056557 | Msa0049650:intron | 25.0% |
!! | AAGTTAAACTAGTTTGGTTA+GGG | - | chr1_2:3056539-3056558 | Msa0049650:intron | 25.0% |
!! | TTTCTCCATCATTTTGTATA+AGG | + | chr1_2:3056635-3056654 | None:intergenic | 25.0% |
!! | CAATATATGATAGAGCATTA+TGG | - | chr1_2:3057363-3057382 | Msa0049650:intron | 25.0% |
! | CAGCTAATTTAAACATTCTA+AGG | - | chr1_2:3057652-3057671 | Msa0049650:CDS | 25.0% |
!! | TTAGAAAATTTTGAACTCTC+AGG | + | chr1_2:3057920-3057939 | None:intergenic | 25.0% |
! | TGATTGAATTTCAGATTTGA+GGG | - | chr1_2:3058181-3058200 | Msa0049650:intron | 25.0% |
! | TCATGTATAAATACAGTTTG+TGG | + | chr1_2:3058269-3058288 | None:intergenic | 25.0% |
! | CTATCATATCCTAAAAAATC+AGG | - | chr1_2:3058501-3058520 | Msa0049650:intron | 25.0% |
!!! | ATATCTTCTTTTTTGTGAGA+AGG | + | chr1_2:3058663-3058682 | None:intergenic | 25.0% |
! | TTTGTTCAAATATGCAAAAC+AGG | - | chr1_2:3058697-3058716 | Msa0049650:CDS | 25.0% |
! | TCAAAATAAATGATAGGAGT+AGG | - | chr1_2:3058751-3058770 | Msa0049650:CDS | 25.0% |
! | CAAAATAAATGATAGGAGTA+GGG | - | chr1_2:3058752-3058771 | Msa0049650:CDS | 25.0% |
! | TACTGTAGCATAAATTCTTT+GGG | + | chr1_2:3058810-3058829 | None:intergenic | 25.0% |
!!! | TTCCTTTTGTGATATTGATT+GGG | + | chr1_2:3058936-3058955 | None:intergenic | 25.0% |
!!! | AGTAACAACAAACTTGTTAA+AGG | - | chr1_2:3058982-3059001 | Msa0049650:CDS | 25.0% |
! | AAATTTATGAAGATTAGGCA+TGG | - | chr1_2:3059073-3059092 | Msa0049650:CDS | 25.0% |
! | AATTTATGAAGATTAGGCAT+GGG | - | chr1_2:3059074-3059093 | Msa0049650:CDS | 25.0% |
! | ACAGATCATCTCTATAAATA+GGG | + | chr1_2:3059269-3059288 | None:intergenic | 25.0% |
! | TACAGATCATCTCTATAAAT+AGG | + | chr1_2:3059270-3059289 | None:intergenic | 25.0% |
!!! | ATTTGTTTGAACTCACTTTT+TGG | + | chr1_2:3059484-3059503 | None:intergenic | 25.0% |
! | AAGAAGAAAAACAAACTTCT+GGG | + | chr1_2:3059514-3059533 | None:intergenic | 25.0% |
! | AAAGAAGAAAAACAAACTTC+TGG | + | chr1_2:3059515-3059534 | None:intergenic | 25.0% |
! | CTAAAGCATGTAACAAAATT+AGG | + | chr1_2:3059545-3059564 | None:intergenic | 25.0% |
!! | CTAATTTTGTTACATGCTTT+AGG | - | chr1_2:3059543-3059562 | Msa0049650:intron | 25.0% |
! | ATCAACAATAACAGGATAAA+AGG | + | chr1_2:3059571-3059590 | None:intergenic | 25.0% |
! | TATCCTTCATATGTCAATAA+TGG | - | chr1_2:3059817-3059836 | Msa0049650:intron | 25.0% |
! | ATCCTTCATATGTCAATAAT+GGG | - | chr1_2:3059818-3059837 | Msa0049650:intron | 25.0% |
! | ATGTATAGTTTCTGTTTGTA+AGG | - | chr1_2:3059888-3059907 | Msa0049650:intron | 25.0% |
! | GAATTAAGATATGGTAAGTT+TGG | + | chr1_2:3060131-3060150 | None:intergenic | 25.0% |
! | AAAAATTACTTTCAACTTGC+TGG | + | chr1_2:3060202-3060221 | None:intergenic | 25.0% |
!!! | GGTTTTTCTTTTTTATCTGT+TGG | - | chr1_2:3060783-3060802 | Msa0049650:intron | 25.0% |
! | ACTTGCAATGCAAAAAAAAA+TGG | - | chr1_2:3060817-3060836 | Msa0049650:intron | 25.0% |
!!! | ATATAACTTTTTTGGGACTT+TGG | + | chr1_2:3060912-3060931 | None:intergenic | 25.0% |
! | CTAGTCAGAAAACAAAATTA+TGG | - | chr1_2:3061072-3061091 | Msa0049650:intron | 25.0% |
!! | AGATTTGATGACAAAAAACT+TGG | + | chr1_2:3061498-3061517 | None:intergenic | 25.0% |
!!! | GTTCATAAGAGCATTAAATA+TGG | - | chr1_2:3061533-3061552 | Msa0049650:intron | 25.0% |
! | TACCTATTTACAGCTATTAT+AGG | + | chr1_2:3061717-3061736 | None:intergenic | 25.0% |
! | TATTCTCATCTCTATATACT+AGG | + | chr1_2:3061835-3061854 | None:intergenic | 25.0% |
! | AAGAAATGTTGATCAAATAG+AGG | - | chr1_2:3062004-3062023 | Msa0049650:intron | 25.0% |
! | CAAAATTCCTATCAATGATT+TGG | + | chr1_2:3062076-3062095 | None:intergenic | 25.0% |
!!! | GATAGGAATTTTGAAGTAAA+TGG | - | chr1_2:3062083-3062102 | Msa0049650:intron | 25.0% |
!! | TGAAGTAAATGGTGTATTTT+TGG | - | chr1_2:3062094-3062113 | Msa0049650:intron | 25.0% |
! | TCAGAATCTTTGTTAAACTT+AGG | - | chr1_2:3062586-3062605 | Msa0049650:intron | 25.0% |
!! | GGGTTGTTATTATAAGTTTA+AGG | + | chr1_2:3062881-3062900 | None:intergenic | 25.0% |
!! | GATAACATACTTTAAAAGAC+AGG | + | chr1_2:3062925-3062944 | None:intergenic | 25.0% |
!!! | TTGCATTTTGTTTTTTGGTA+GGG | - | chr1_2:3062972-3062991 | Msa0049650:intron | 25.0% |
!! | TTTAGGATTAAAAGACCAAA+AGG | + | chr1_2:3063075-3063094 | None:intergenic | 25.0% |
!!! | TTTTCAGCTTTATATGTGTA+TGG | - | chr1_2:3063180-3063199 | Msa0049650:intron | 25.0% |
! | TTTCTTCTTATATTAAGGAC+CGG | + | chr1_2:3063224-3063243 | None:intergenic | 25.0% |
!!! | ACATTGGTTTTGATGTTTTT+TGG | + | chr1_2:3063249-3063268 | None:intergenic | 25.0% |
! | AAAGACAAACATTAAATGAG+GGG | - | chr1_2:3063358-3063377 | Msa0049650:intron | 25.0% |
! | TGTGACATTTGCTTATAAAT+AGG | - | chr1_2:3063419-3063438 | Msa0049650:intron | 25.0% |
! | TGTACAAGAAATTTATACTC+CGG | + | chr1_2:3063482-3063501 | None:intergenic | 25.0% |
! | TAAAGCTATGTAGTCAAAAA+AGG | + | chr1_2:3063627-3063646 | None:intergenic | 25.0% |
! | ACTTGTAATTCTCTTGTAAA+TGG | - | chr1_2:3063665-3063684 | Msa0049650:intron | 25.0% |
! | TTCTGAATATTAAACGTTTC+AGG | - | chr1_2:3063736-3063755 | Msa0049650:intron | 25.0% |
! | ATTAAAATCATAGGGTCATT+GGG | - | chr1_2:3064237-3064256 | Msa0049650:exon | 25.0% |
!!! | TTAATAATTTTGGGCTTGTT+AGG | - | chr1_2:3064413-3064432 | Msa0049650:five_prime_UTR | 25.0% |
AAAGAATCGATGTGAATGAA+TGG | - | chr1_2:3054829-3054848 | Msa0049650:three_prime_UTR | 30.0% | |
AAGAATCGATGTGAATGAAT+GGG | - | chr1_2:3054830-3054849 | Msa0049650:three_prime_UTR | 30.0% | |
TTACAATTTCAGTTTCATGG+CGG | - | chr1_2:3054901-3054920 | Msa0049650:three_prime_UTR | 30.0% | |
CTAATTAAGACAATAATCGG+CGG | - | chr1_2:3055069-3055088 | Msa0049650:CDS | 30.0% | |
ATACACATAAATCACACGTA+TGG | + | chr1_2:3055118-3055137 | None:intergenic | 30.0% | |
!! | TGTCTTCAAATTAGCTTTGT+TGG | - | chr1_2:3055151-3055170 | Msa0049650:CDS | 30.0% |
CAGTAGTTTACTTAAAAGCA+AGG | - | chr1_2:3055621-3055640 | Msa0049650:intron | 30.0% | |
! | ATGTTTTCCATCATGACTTT+TGG | + | chr1_2:3055648-3055667 | None:intergenic | 30.0% |
! | AAGTCATGATGGAAAACATT+TGG | - | chr1_2:3055649-3055668 | Msa0049650:intron | 30.0% |
! | AGTCATGATGGAAAACATTT+GGG | - | chr1_2:3055650-3055669 | Msa0049650:intron | 30.0% |
!! | AGCTTGTTGAAAAAGTTTAG+AGG | - | chr1_2:3055680-3055699 | Msa0049650:intron | 30.0% |
! | GCTTGTTGAAAAAGTTTAGA+GGG | - | chr1_2:3055681-3055700 | Msa0049650:intron | 30.0% |
! | TGGAGTCTACTTGTTAAAAT+GGG | - | chr1_2:3056036-3056055 | Msa0049650:intron | 30.0% |
ACTCATAAATGGACAGTAAA+TGG | - | chr1_2:3056115-3056134 | Msa0049650:intron | 30.0% | |
ATAAATGGACAGTAAATGGA+GGG | - | chr1_2:3056119-3056138 | Msa0049650:intron | 30.0% | |
TGAATCAATGCAAAATTGAG+AGG | - | chr1_2:3056201-3056220 | Msa0049650:intron | 30.0% | |
GAATCAATGCAAAATTGAGA+GGG | - | chr1_2:3056202-3056221 | Msa0049650:intron | 30.0% | |
! | ATTTTGTATAAGGAAGGTCA+TGG | + | chr1_2:3056625-3056644 | None:intergenic | 30.0% |
ACCTTCCTTATACAAAATGA+TGG | - | chr1_2:3056627-3056646 | Msa0049650:CDS | 30.0% | |
! | TCCATCATTTTGTATAAGGA+AGG | + | chr1_2:3056631-3056650 | None:intergenic | 30.0% |
GTGATAAAATTTAATCCCTC+TGG | - | chr1_2:3056715-3056734 | Msa0049650:CDS | 30.0% | |
!! | TGTGTGTAGTTAGTTAGTTT+TGG | + | chr1_2:3056753-3056772 | None:intergenic | 30.0% |
TTAATTGAGTGACATGAGTT+AGG | - | chr1_2:3056910-3056929 | Msa0049650:intron | 30.0% | |
! | AATTTTCTCTACAACTTGAG+TGG | + | chr1_2:3057002-3057021 | None:intergenic | 30.0% |
TAAGATCAACGATGTTGTAT+GGG | - | chr1_2:3057036-3057055 | Msa0049650:intron | 30.0% | |
CGAAAATACTAGACAAGATA+AGG | - | chr1_2:3057134-3057153 | Msa0049650:intron | 30.0% | |
GAGATATAGTGTAGAAAAGT+TGG | - | chr1_2:3057176-3057195 | Msa0049650:intron | 30.0% | |
! | ATTTCTAGAAGATGACACAA+TGG | - | chr1_2:3057576-3057595 | Msa0049650:CDS | 30.0% |
! | CATGTGTTTGTCATCTTTTT+CGG | - | chr1_2:3057878-3057897 | Msa0049650:CDS | 30.0% |
! | ATGTGTTTGTCATCTTTTTC+GGG | - | chr1_2:3057879-3057898 | Msa0049650:CDS | 30.0% |
! | AAAATTTTCTAACTCTTCCC+AGG | - | chr1_2:3057928-3057947 | Msa0049650:CDS | 30.0% |
! | AAATTTTCTAACTCTTCCCA+GGG | - | chr1_2:3057929-3057948 | Msa0049650:CDS | 30.0% |
GTGATTGAATTTCAGATTTG+AGG | - | chr1_2:3058180-3058199 | Msa0049650:intron | 30.0% | |
TTTGTGGTCTCTCAATATAA+AGG | + | chr1_2:3058253-3058272 | None:intergenic | 30.0% | |
TAGAATACTCTAGTATTACC+AGG | - | chr1_2:3058361-3058380 | Msa0049650:intron | 30.0% | |
TGCAAAACCTAATCTTAGAT+TGG | - | chr1_2:3058569-3058588 | Msa0049650:intron | 30.0% | |
GAGACAACAAGATAATGATT+CGG | - | chr1_2:3058635-3058654 | Msa0049650:intron | 30.0% | |
GCATATTTGAACAAAACATG+TGG | + | chr1_2:3058692-3058711 | None:intergenic | 30.0% | |
TTCAATCTCTATAGAGATTC+AGG | + | chr1_2:3058787-3058806 | None:intergenic | 30.0% | |
CTACTGTAGCATAAATTCTT+TGG | + | chr1_2:3058811-3058830 | None:intergenic | 30.0% | |
ATGGTTGAAGAAACAAACTT+TGG | + | chr1_2:3058876-3058895 | None:intergenic | 30.0% | |
! | GTTCCTTTTGTGATATTGAT+TGG | + | chr1_2:3058937-3058956 | None:intergenic | 30.0% |
!! | AACAACAAACTTGTTAAAGG+AGG | - | chr1_2:3058985-3059004 | Msa0049650:CDS | 30.0% |
!! | ACAACAAACTTGTTAAAGGA+GGG | - | chr1_2:3058986-3059005 | Msa0049650:CDS | 30.0% |
!! | ATCATGGATTAGAAGTATCT+GGG | - | chr1_2:3059217-3059236 | Msa0049650:intron | 30.0% |
CAGATCATCTCTATAAATAG+GGG | + | chr1_2:3059268-3059287 | None:intergenic | 30.0% | |
CCTAGTAAAACATTATTGGA+CGG | - | chr1_2:3059334-3059353 | Msa0049650:CDS | 30.0% | |
AAACAAGCATCAACAATAAC+AGG | + | chr1_2:3059579-3059598 | None:intergenic | 30.0% | |
TAGGTGTTTCTCTTAAAATC+AGG | - | chr1_2:3059687-3059706 | Msa0049650:intron | 30.0% | |
!! | GCATATCTTAATTTGTGCAA+TGG | - | chr1_2:3059709-3059728 | Msa0049650:intron | 30.0% |
!! | TCTTTTGTGAAACTGATTTC+AGG | - | chr1_2:3059763-3059782 | Msa0049650:intron | 30.0% |
TCCTTCATATGTCAATAATG+GGG | - | chr1_2:3059819-3059838 | Msa0049650:intron | 30.0% | |
AGACACCCTAATATAAAAGT+TGG | + | chr1_2:3059932-3059951 | None:intergenic | 30.0% | |
ATATCCAGAATGGAAAACAA+GGG | + | chr1_2:3059970-3059989 | None:intergenic | 30.0% | |
TTAAGATATGGTAAGTTTGG+AGG | + | chr1_2:3060128-3060147 | None:intergenic | 30.0% | |
!! | AAACGTTGTTGTTCACTTTT+GGG | + | chr1_2:3060550-3060569 | None:intergenic | 30.0% |
!! | TAAACGTTGTTGTTCACTTT+TGG | + | chr1_2:3060551-3060570 | None:intergenic | 30.0% |
! | AGATTGCTATACAAGCTTTT+TGG | - | chr1_2:3060611-3060630 | Msa0049650:intron | 30.0% |
TTTCTCTTGAAAATAGCAGA+CGG | - | chr1_2:3061264-3061283 | Msa0049650:intron | 30.0% | |
! | TCTTCTTTTTGCAGATGTAA+TGG | - | chr1_2:3061302-3061321 | Msa0049650:intron | 30.0% |
!! | ATCAATAGCGTTATTTTCAG+AGG | + | chr1_2:3061393-3061412 | None:intergenic | 30.0% |
TCTGAAAATAACGCTATTGA+TGG | - | chr1_2:3061392-3061411 | Msa0049650:intron | 30.0% | |
CCGAGAAAAAGAGAAAAATT+CGG | + | chr1_2:3061637-3061656 | None:intergenic | 30.0% | |
! | CCGAATTTTTCTCTTTTTCT+CGG | - | chr1_2:3061634-3061653 | Msa0049650:intron | 30.0% |
CTATTATAGGACGATGAATA+CGG | + | chr1_2:3061704-3061723 | None:intergenic | 30.0% | |
GTCCTATAATAGCTGTAAAT+AGG | - | chr1_2:3061712-3061731 | Msa0049650:intron | 30.0% | |
GAACAAAATATTCTGAACCA+AGG | + | chr1_2:3061758-3061777 | None:intergenic | 30.0% | |
GTATAAAACTAAATGTTGGG+TGG | - | chr1_2:3061790-3061809 | Msa0049650:intron | 30.0% | |
AGAATATTATGCTAGATGAG+TGG | - | chr1_2:3061849-3061868 | Msa0049650:intron | 30.0% | |
! | CAGTATATTTTCTACAATGG+GGG | + | chr1_2:3061931-3061950 | None:intergenic | 30.0% |
! | CCAGTATATTTTCTACAATG+GGG | + | chr1_2:3061932-3061951 | None:intergenic | 30.0% |
! | CCCAGTATATTTTCTACAAT+GGG | + | chr1_2:3061933-3061952 | None:intergenic | 30.0% |
CCCATTGTAGAAAATATACT+GGG | - | chr1_2:3061930-3061949 | Msa0049650:intron | 30.0% | |
CCATTGTAGAAAATATACTG+GGG | - | chr1_2:3061931-3061950 | Msa0049650:intron | 30.0% | |
CTATAAGCCAAATCATTGAT+AGG | - | chr1_2:3062066-3062085 | Msa0049650:intron | 30.0% | |
!!! | TGTATTTTTGGACTAAATGC+AGG | - | chr1_2:3062106-3062125 | Msa0049650:intron | 30.0% |
TCAACAGAAATATACATGAC+AGG | - | chr1_2:3062145-3062164 | Msa0049650:intron | 30.0% | |
CAACAGAAATATACATGACA+GGG | - | chr1_2:3062146-3062165 | Msa0049650:intron | 30.0% | |
TAAACACATTTAACCCTTGT+TGG | + | chr1_2:3062178-3062197 | None:intergenic | 30.0% | |
!! | TGCTTTAGCACTGATTTAAT+TGG | - | chr1_2:3062240-3062259 | Msa0049650:intron | 30.0% |
!! | GCTTTAGCACTGATTTAATT+GGG | - | chr1_2:3062241-3062260 | Msa0049650:intron | 30.0% |
CTGGAAATAGTTGTAACATT+AGG | + | chr1_2:3062315-3062334 | None:intergenic | 30.0% | |
CTAATGTTACAACTATTTCC+AGG | - | chr1_2:3062313-3062332 | Msa0049650:intron | 30.0% | |
GTTACAAACGTGAAACTTAA+AGG | + | chr1_2:3062837-3062856 | None:intergenic | 30.0% | |
! | ATAGGTCCTTTAAGTTTCAA+AGG | - | chr1_2:3062652-3062671 | Msa0049650:intron | 30.0% |
!! | CTGTAACCTTTGAAACTTAA+AGG | + | chr1_2:3062806-3062825 | None:intergenic | 30.0% |
AAGTTTCAAAGGTTACAGAT+AGG | - | chr1_2:3062663-3062682 | Msa0049650:intron | 30.0% | |
! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr1_2:3062681-3062700 | Msa0049650:intron | 30.0% |
CTGAAACCTTAGAAACTTAA+AGG | + | chr1_2:3062777-3062796 | None:intergenic | 30.0% | |
!! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr1_2:3062692-3062711 | Msa0049650:intron | 30.0% |
!! | GTTTCGAGTTTGTTTCATAT+AGG | + | chr1_2:3062744-3062763 | None:intergenic | 30.0% |
GAAACAAACTCGAAACTTAA+AGG | - | chr1_2:3062748-3062767 | Msa0049650:intron | 30.0% | |
!! | AAGTTTCTAAGGTTTCAGAT+AGG | + | chr1_2:3062692-3062711 | None:intergenic | 30.0% |
CTGAAACCTTAGAAACTTAA+AGG | - | chr1_2:3062777-3062796 | Msa0049650:intron | 30.0% | |
! | ATAGGTCCTTTAAGTTTCTA+AGG | + | chr1_2:3062681-3062700 | None:intergenic | 30.0% |
AAGTTTCAAAGGTTACAGAT+AGG | + | chr1_2:3062663-3062682 | None:intergenic | 30.0% | |
!! | CTGTAACCTTTGAAACTTAA+AGG | - | chr1_2:3062806-3062825 | Msa0049650:intron | 30.0% |
! | ATAGGTCCTTTAAGTTTCAA+AGG | + | chr1_2:3062652-3062671 | None:intergenic | 30.0% |
GTTACAAACGTGAAACTTAA+AGG | - | chr1_2:3062837-3062856 | Msa0049650:intron | 30.0% | |
!!! | GTTGCATTTTGTTTTTTGGT+AGG | - | chr1_2:3062971-3062990 | Msa0049650:intron | 30.0% |
!!! | TGCATTTTGTTTTTTGGTAG+GGG | - | chr1_2:3062973-3062992 | Msa0049650:intron | 30.0% |
! | GACATATTCCGAATTTTTAC+TGG | + | chr1_2:3063019-3063038 | None:intergenic | 30.0% |
!!! | TAGTCACCACCTTTATTTTT+TGG | - | chr1_2:3063048-3063067 | Msa0049650:intron | 30.0% |
AAAGGTCCAAAAAATAAAGG+TGG | + | chr1_2:3063057-3063076 | None:intergenic | 30.0% | |
CCAAAAGGTCCAAAAAATAA+AGG | + | chr1_2:3063060-3063079 | None:intergenic | 30.0% | |
!!! | CCTTTATTTTTTGGACCTTT+TGG | - | chr1_2:3063057-3063076 | Msa0049650:intron | 30.0% |
ACAACAATTAATGCTGACAT+TGG | + | chr1_2:3063265-3063284 | None:intergenic | 30.0% | |
! | GCAAATGTCACAACTTTTAA+GGG | + | chr1_2:3063411-3063430 | None:intergenic | 30.0% |
! | AGCAAATGTCACAACTTTTA+AGG | + | chr1_2:3063412-3063431 | None:intergenic | 30.0% |
CTATACTCCTATCATACTTT+GGG | - | chr1_2:3063540-3063559 | Msa0049650:intron | 30.0% | |
TATACTCCTATCATACTTTG+GGG | - | chr1_2:3063541-3063560 | Msa0049650:intron | 30.0% | |
TAAAGCTATGTAGTCAAAGA+TGG | + | chr1_2:3063579-3063598 | None:intergenic | 30.0% | |
ATGTAGTCAAAAAAGGATAG+CGG | + | chr1_2:3063620-3063639 | None:intergenic | 30.0% | |
AGAGAATTACAAGTGAAATC+AGG | + | chr1_2:3063659-3063678 | None:intergenic | 30.0% | |
CATAGAAATCAAAATCATCC+AGG | + | chr1_2:3063826-3063845 | None:intergenic | 30.0% | |
! | AGTGTCAAAAAACTTTTCTC+TGG | - | chr1_2:3063970-3063989 | Msa0049650:intron | 30.0% |
GGTTTAAATACATTACTGGT+GGG | + | chr1_2:3064064-3064083 | None:intergenic | 30.0% | |
ACCAGTAATGTATTTAAACC+CGG | - | chr1_2:3064064-3064083 | Msa0049650:intron | 30.0% | |
!! | TCTTCGTAGTTTTTCAAACA+AGG | - | chr1_2:3064199-3064218 | Msa0049650:CDS | 30.0% |
TGTGATGCCATTAAAATCAT+AGG | - | chr1_2:3064228-3064247 | Msa0049650:exon | 30.0% | |
GTGATGCCATTAAAATCATA+GGG | - | chr1_2:3064229-3064248 | Msa0049650:exon | 30.0% | |
! | CAATGACCCTATGATTTTAA+TGG | + | chr1_2:3064238-3064257 | None:intergenic | 30.0% |
CATTAAAATCATAGGGTCAT+TGG | - | chr1_2:3064236-3064255 | Msa0049650:exon | 30.0% | |
TTAAAATCATAGGGTCATTG+GGG | - | chr1_2:3064238-3064257 | Msa0049650:five_prime_UTR | 30.0% | |
! | TATGCAAAGGTGTAATGTAT+GGG | + | chr1_2:3064353-3064372 | None:intergenic | 30.0% |
! | ATATGCAAAGGTGTAATGTA+TGG | + | chr1_2:3064354-3064373 | None:intergenic | 30.0% |
TAACCTACTCAAATATGCAA+AGG | + | chr1_2:3064366-3064385 | None:intergenic | 30.0% | |
TCATGATGCGTAAACGTAAA+CGG | + | chr1_2:3054743-3054762 | None:intergenic | 35.0% | |
GAATTTGAATTACGTACCTG+TGG | + | chr1_2:3054966-3054985 | None:intergenic | 35.0% | |
AACTCAACCAGATAACATGA+AGG | - | chr1_2:3055235-3055254 | Msa0049650:CDS | 35.0% | |
ATCTGATCCTTCATGTTATC+TGG | + | chr1_2:3055245-3055264 | None:intergenic | 35.0% | |
TAACATGAAGGATCAGATTG+TGG | - | chr1_2:3055247-3055266 | Msa0049650:CDS | 35.0% | |
! | GTCATGATGGAAAACATTTG+GGG | - | chr1_2:3055651-3055670 | Msa0049650:intron | 35.0% |
ACCAATTGTCTTACTCTATG+AGG | - | chr1_2:3055857-3055876 | Msa0049650:intron | 35.0% | |
ACCTCATAGAGTAAGACAAT+TGG | + | chr1_2:3055861-3055880 | None:intergenic | 35.0% | |
!! | GTAAGCTTTAGCTTGAAGAA+AGG | + | chr1_2:3055943-3055962 | None:intergenic | 35.0% |
ATAAGAGAGATAGACACAAG+TGG | - | chr1_2:3055993-3056012 | Msa0049650:intron | 35.0% | |
AACAAGTAGACTCCACTAAT+GGG | + | chr1_2:3056031-3056050 | None:intergenic | 35.0% | |
TAACAAGTAGACTCCACTAA+TGG | + | chr1_2:3056032-3056051 | None:intergenic | 35.0% | |
! | GTGGAGTCTACTTGTTAAAA+TGG | - | chr1_2:3056035-3056054 | Msa0049650:intron | 35.0% |
CATAAATGGACAGTAAATGG+AGG | - | chr1_2:3056118-3056137 | Msa0049650:intron | 35.0% | |
GTAAATGGAGGGTAGATAAA+TGG | - | chr1_2:3056130-3056149 | Msa0049650:intron | 35.0% | |
TGCGTTTAGTTAGTGATGAA+AGG | - | chr1_2:3056178-3056197 | Msa0049650:intron | 35.0% | |
! | TTCTTGAGCTTTTCACGTAA+TGG | + | chr1_2:3056378-3056397 | None:intergenic | 35.0% |
TTTCAAGAAGTGACTTCGTT+AGG | + | chr1_2:3056414-3056433 | None:intergenic | 35.0% | |
!! | AACCAATTTCCGGATTAGTT+CGG | - | chr1_2:3056570-3056589 | Msa0049650:intron | 35.0% |
TGAAATGAACCGAACTAATC+CGG | + | chr1_2:3056582-3056601 | None:intergenic | 35.0% | |
ACCATCAAATTCAAGCAAGA+TGG | - | chr1_2:3056670-3056689 | Msa0049650:CDS | 35.0% | |
TCCATCTTGCTTGAATTTGA+TGG | + | chr1_2:3056674-3056693 | None:intergenic | 35.0% | |
ATTCAAGCAAGATGGATGAA+TGG | - | chr1_2:3056678-3056697 | Msa0049650:CDS | 35.0% | |
TGGTTATAACTAAGACCAGA+GGG | + | chr1_2:3056733-3056752 | None:intergenic | 35.0% | |
TTGGTTATAACTAAGACCAG+AGG | + | chr1_2:3056734-3056753 | None:intergenic | 35.0% | |
GTAAGATCAACGATGTTGTA+TGG | - | chr1_2:3057035-3057054 | Msa0049650:intron | 35.0% | |
TCAGATAGATAGTAGCCAAT+CGG | - | chr1_2:3057262-3057281 | Msa0049650:intron | 35.0% | |
AAACCTGAAAGTCGATGATT+TGG | - | chr1_2:3057329-3057348 | Msa0049650:intron | 35.0% | |
!! | TATCCAAATCATCGACTTTC+AGG | + | chr1_2:3057335-3057354 | None:intergenic | 35.0% |
GGAGAAAACATCAGAAACAA+TGG | - | chr1_2:3057456-3057475 | Msa0049650:intron | 35.0% | |
!! | TTTGAACTCTCAGGTATTGA+TGG | + | chr1_2:3057911-3057930 | None:intergenic | 35.0% |
CAACAACTATAGGTCATTCA+CGG | - | chr1_2:3057954-3057973 | Msa0049650:CDS | 35.0% | |
AACAACTATAGGTCATTCAC+GGG | - | chr1_2:3057955-3057974 | Msa0049650:CDS | 35.0% | |
ACCAGATCTACAGTTATCAT+CGG | + | chr1_2:3058309-3058328 | None:intergenic | 35.0% | |
!! | GTGTTTCTAGTATCTTCCAT+TGG | + | chr1_2:3058458-3058477 | None:intergenic | 35.0% |
!!! | TGCAGTGATCCTGATTTTTT+AGG | + | chr1_2:3058513-3058532 | None:intergenic | 35.0% |
TGCAATCTTCATGACAAACT+TGG | + | chr1_2:3058553-3058572 | None:intergenic | 35.0% | |
! | CCAAACTCCAATCTAAGATT+AGG | + | chr1_2:3058579-3058598 | None:intergenic | 35.0% |
CCTAATCTTAGATTGGAGTT+TGG | - | chr1_2:3058576-3058595 | Msa0049650:intron | 35.0% | |
ATCTTAGATTGGAGTTTGGT+TGG | - | chr1_2:3058580-3058599 | Msa0049650:intron | 35.0% | |
TCTTAGATTGGAGTTTGGTT+GGG | - | chr1_2:3058581-3058600 | Msa0049650:intron | 35.0% | |
TTGAACAAAACATGTGGAGT+TGG | + | chr1_2:3058686-3058705 | None:intergenic | 35.0% | |
! | CACATAGTTGCTTTGAGTTA+CGG | + | chr1_2:3058724-3058743 | None:intergenic | 35.0% |
GTTGAAGAAACAAACTTTGG+TGG | + | chr1_2:3058873-3058892 | None:intergenic | 35.0% | |
! | GTTTGTTTCTTCAACCATCA+AGG | - | chr1_2:3058878-3058897 | Msa0049650:CDS | 35.0% |
ATACTTTGCTTGTTCCTTGA+TGG | + | chr1_2:3058895-3058914 | None:intergenic | 35.0% | |
! | AGGAACAAGCAAAGTATTTG+AGG | - | chr1_2:3058898-3058917 | Msa0049650:CDS | 35.0% |
TGCCCAATCAATATCACAAA+AGG | - | chr1_2:3058931-3058950 | Msa0049650:CDS | 35.0% | |
! | AAAGTAACAACGTCCCTTTT+AGG | - | chr1_2:3059009-3059028 | Msa0049650:CDS | 35.0% |
TGTTACAGTCGATCCTAAAA+GGG | + | chr1_2:3059025-3059044 | None:intergenic | 35.0% | |
TTGTTACAGTCGATCCTAAA+AGG | + | chr1_2:3059026-3059045 | None:intergenic | 35.0% | |
!!! | TTTTAGGATCGACTGTAACA+AGG | - | chr1_2:3059025-3059044 | Msa0049650:CDS | 35.0% |
CTGTAACAAGGAAAGACAAT+TGG | - | chr1_2:3059037-3059056 | Msa0049650:CDS | 35.0% | |
GGGTTTATGAACCAAACAAA+TGG | - | chr1_2:3059094-3059113 | Msa0049650:CDS | 35.0% | |
!! | CATCATGGATTAGAAGTATC+TGG | - | chr1_2:3059216-3059235 | Msa0049650:intron | 35.0% |
! | CCGTCCAATAATGTTTTACT+AGG | + | chr1_2:3059337-3059356 | None:intergenic | 35.0% |
! | TAATTTGTGCAATGGTTGTG+TGG | - | chr1_2:3059717-3059736 | Msa0049650:intron | 35.0% |
AATTTGTGCAATGGTTGTGT+GGG | - | chr1_2:3059718-3059737 | Msa0049650:intron | 35.0% | |
!!! | CTGATTTCAGGTTTTGACAA+TGG | - | chr1_2:3059775-3059794 | Msa0049650:intron | 35.0% |
CCTTCATATGTCAATAATGG+GGG | - | chr1_2:3059820-3059839 | Msa0049650:intron | 35.0% | |
AAGATATGCCAAATTCTCAC+AGG | + | chr1_2:3059862-3059881 | None:intergenic | 35.0% | |
CATATCCAGAATGGAAAACA+AGG | + | chr1_2:3059971-3059990 | None:intergenic | 35.0% | |
!! | CTTGTTTTCCATTCTGGATA+TGG | - | chr1_2:3059969-3059988 | Msa0049650:intron | 35.0% |
TTGAGATTCATGAAAGCTGA+AGG | + | chr1_2:3060294-3060313 | None:intergenic | 35.0% | |
AGCTTTCATGAATCTCAACA+AGG | - | chr1_2:3060296-3060315 | Msa0049650:intron | 35.0% | |
GAATCTCAACAAGGATTTGA+TGG | - | chr1_2:3060305-3060324 | Msa0049650:intron | 35.0% | |
!! | TTGCTTTAAAACTCTTGCCA+GGG | + | chr1_2:3060761-3060780 | None:intergenic | 35.0% |
!! | ATTGCTTTAAAACTCTTGCC+AGG | + | chr1_2:3060762-3060781 | None:intergenic | 35.0% |
!!! | GGCAAGAGTTTTAAAGCAAT+TGG | - | chr1_2:3060762-3060781 | Msa0049650:intron | 35.0% |
AGATGCACTAAGAAAGAGAT+AGG | + | chr1_2:3060884-3060903 | None:intergenic | 35.0% | |
AAATTATGGGTTTGACAGTG+TGG | - | chr1_2:3061086-3061105 | Msa0049650:CDS | 35.0% | |
ATCAACAGCGATCTTTGTAT+GGG | - | chr1_2:3061135-3061154 | Msa0049650:CDS | 35.0% | |
!!! | GTCTGCTATTTTCAAGAGAA+AGG | + | chr1_2:3061265-3061284 | None:intergenic | 35.0% |
TTGAAATCAGTGGCAAAATC+TGG | + | chr1_2:3061470-3061489 | None:intergenic | 35.0% | |
!!! | AGATTTTGCCACTGATTTCA+AGG | - | chr1_2:3061469-3061488 | Msa0049650:intron | 35.0% |
! | AGAGCATTAAATATGGTGTC+TGG | - | chr1_2:3061540-3061559 | Msa0049650:intron | 35.0% |
GAGCATTAAATATGGTGTCT+GGG | - | chr1_2:3061541-3061560 | Msa0049650:intron | 35.0% | |
TCTAACTTCCTGTTTCCATT+TGG | + | chr1_2:3061575-3061594 | None:intergenic | 35.0% | |
GAAAAAGAGAAAAATTCGGC+AGG | + | chr1_2:3061633-3061652 | None:intergenic | 35.0% | |
AGATCGTTAGAGAGAATACT+AGG | - | chr1_2:3061901-3061920 | Msa0049650:intron | 35.0% | |
GATCGTTAGAGAGAATACTA+GGG | - | chr1_2:3061902-3061921 | Msa0049650:intron | 35.0% | |
CCCCATTGTAGAAAATATAC+TGG | - | chr1_2:3061929-3061948 | Msa0049650:intron | 35.0% | |
! | CCCCAGTATATTTTCTACAA+TGG | + | chr1_2:3061934-3061953 | None:intergenic | 35.0% |
!! | TAGCACTGATTTAATTGGGT+AGG | - | chr1_2:3062245-3062264 | Msa0049650:intron | 35.0% |
!! | TTTATTATGTGCCACTTCAC+AGG | + | chr1_2:3062443-3062462 | None:intergenic | 35.0% |
GTTTCACGTTTGTAACAGAT+AGG | - | chr1_2:3062634-3062653 | Msa0049650:intron | 35.0% | |
CTTTCTATCAACCTTCGTTA+AGG | + | chr1_2:3062719-3062738 | None:intergenic | 35.0% | |
!! | CTTAACGAAGGTTGATAGAA+AGG | - | chr1_2:3062717-3062736 | Msa0049650:intron | 35.0% |
GTTTCACGTTTGTAACAGAT+AGG | + | chr1_2:3062634-3062653 | None:intergenic | 35.0% | |
CCAAAAAACAAAATGCAACC+AGG | + | chr1_2:3062970-3062989 | None:intergenic | 35.0% | |
!!! | CCTGGTTGCATTTTGTTTTT+TGG | - | chr1_2:3062967-3062986 | Msa0049650:intron | 35.0% |
TTCTTATATTAAGGACCGGA+GGG | + | chr1_2:3063464-3063483 | None:intergenic | 35.0% | |
! | AAGTATGATAGGAGTATAGC+AGG | + | chr1_2:3063539-3063558 | None:intergenic | 35.0% |
GCTATACTCCTATCATACTT+TGG | - | chr1_2:3063539-3063558 | Msa0049650:intron | 35.0% | |
ATGTAGTCAAAGATGGATAG+CGG | + | chr1_2:3063572-3063591 | None:intergenic | 35.0% | |
! | TTGACTACATAGCTTTACAC+TGG | - | chr1_2:3063582-3063601 | Msa0049650:intron | 35.0% |
TGTAGTCAAAAAAGGATAGC+GGG | + | chr1_2:3063619-3063638 | None:intergenic | 35.0% | |
! | TTTCAGGTGAAATTGCAACA+AGG | - | chr1_2:3063752-3063771 | Msa0049650:intron | 35.0% |
TTCAGGTGAAATTGCAACAA+GGG | - | chr1_2:3063753-3063772 | Msa0049650:intron | 35.0% | |
!! | ATAATGCCTACTGGATTAGT+TGG | - | chr1_2:3063896-3063915 | Msa0049650:CDS | 35.0% |
!! | TAATGCCTACTGGATTAGTT+GGG | - | chr1_2:3063897-3063916 | Msa0049650:CDS | 35.0% |
GGGTTTAAATACATTACTGG+TGG | + | chr1_2:3064065-3064084 | None:intergenic | 35.0% | |
ACCGGGTTTAAATACATTAC+TGG | + | chr1_2:3064068-3064087 | None:intergenic | 35.0% | |
AATGTATTTAAACCCGGTGA+AGG | - | chr1_2:3064070-3064089 | Msa0049650:intron | 35.0% | |
! | TTATGCAAAACCACCTCTTT+TGG | + | chr1_2:3064267-3064286 | None:intergenic | 35.0% |
ACACCTTTGCATATTTGAGT+AGG | - | chr1_2:3064360-3064379 | Msa0049650:five_prime_UTR | 35.0% | |
TTGAATTACGTACCTGTGGT+GGG | + | chr1_2:3054962-3054981 | None:intergenic | 40.0% | |
TTTGAATTACGTACCTGTGG+TGG | + | chr1_2:3054963-3054982 | None:intergenic | 40.0% | |
CTCTCACACACACTCATAAA+TGG | - | chr1_2:3056104-3056123 | Msa0049650:intron | 40.0% | |
ACTCACAGTCATACACTTGA+TGG | - | chr1_2:3056273-3056292 | Msa0049650:intron | 40.0% | |
! | GAGTGCTTGTTGAAACTTCA+TGG | - | chr1_2:3056303-3056322 | Msa0049650:intron | 40.0% |
! | GAGTGCTTGTTGAAACTTGA+AGG | - | chr1_2:3056333-3056352 | Msa0049650:intron | 40.0% |
GGTTCATCAGAACCAATTTC+CGG | - | chr1_2:3056560-3056579 | Msa0049650:intron | 40.0% | |
AACCGAACTAATCCGGAAAT+TGG | + | chr1_2:3056575-3056594 | None:intergenic | 40.0% | |
AAGATGGATGAATGGCTTGA+GGG | - | chr1_2:3056686-3056705 | Msa0049650:CDS | 40.0% | |
ATCAACGATGTTGTATGGGA+AGG | - | chr1_2:3057040-3057059 | Msa0049650:intron | 40.0% | |
GAAACAATGGAACTCTACAG+TGG | - | chr1_2:3057469-3057488 | Msa0049650:intron | 40.0% | |
GGAAACCATAAGAGATCACA+TGG | - | chr1_2:3057497-3057516 | Msa0049650:intron | 40.0% | |
AACCATAAGAGATCACATGG+CGG | - | chr1_2:3057500-3057519 | Msa0049650:CDS | 40.0% | |
ACCTATAGTTGTTGTACCCT+GGG | + | chr1_2:3057948-3057967 | None:intergenic | 40.0% | |
! | ACAAGTCAGTCAGGATCTTT+TGG | - | chr1_2:3057983-3058002 | Msa0049650:CDS | 40.0% |
ACCGATGATAACTGTAGATC+TGG | - | chr1_2:3058305-3058324 | Msa0049650:intron | 40.0% | |
AATGATAGGAGTAGGGAGAA+AGG | - | chr1_2:3058759-3058778 | Msa0049650:CDS | 40.0% | |
TTGCTTTCGGTCCATTTGTT+TGG | + | chr1_2:3059108-3059127 | None:intergenic | 40.0% | |
TGTTGTCACCTCATTGCTTT+CGG | + | chr1_2:3059121-3059140 | None:intergenic | 40.0% | |
CAACAATATAAGCCCAACTC+AGG | - | chr1_2:3059143-3059162 | Msa0049650:CDS | 40.0% | |
GCATTTGAATGACCTGAGTT+GGG | + | chr1_2:3059158-3059177 | None:intergenic | 40.0% | |
AACATGGAACACGATCATCA+TGG | - | chr1_2:3059201-3059220 | Msa0049650:intron | 40.0% | |
ATTTGTGCAATGGTTGTGTG+GGG | - | chr1_2:3059719-3059738 | Msa0049650:intron | 40.0% | |
!! | TCAGGTTTTGACAATGGCAA+TGG | - | chr1_2:3059781-3059800 | Msa0049650:intron | 40.0% |
CCCCCATTATTGACATATGA+AGG | + | chr1_2:3059823-3059842 | None:intergenic | 40.0% | |
!!! | CAATCCCTTGTTTTCCATTC+TGG | - | chr1_2:3059963-3059982 | Msa0049650:intron | 40.0% |
TTCAACCCACAAATGCCATA+TGG | - | chr1_2:3059993-3060012 | Msa0049650:intron | 40.0% | |
ATGGTCCATATGGCATTTGT+GGG | + | chr1_2:3060001-3060020 | None:intergenic | 40.0% | |
TATGGTCCATATGGCATTTG+TGG | + | chr1_2:3060002-3060021 | None:intergenic | 40.0% | |
TTGTAATAAGGTGGGGTGTA+TGG | + | chr1_2:3060092-3060111 | None:intergenic | 40.0% | |
CAGATGGTTGTAATAAGGTG+GGG | + | chr1_2:3060099-3060118 | None:intergenic | 40.0% | |
CCAGATGGTTGTAATAAGGT+GGG | + | chr1_2:3060100-3060119 | None:intergenic | 40.0% | |
ACCAGATGGTTGTAATAAGG+TGG | + | chr1_2:3060101-3060120 | None:intergenic | 40.0% | |
GGAACCAGATGGTTGTAATA+AGG | + | chr1_2:3060104-3060123 | None:intergenic | 40.0% | |
AGATATGGTAAGTTTGGAGG+AGG | + | chr1_2:3060125-3060144 | None:intergenic | 40.0% | |
GGAGTCGGTGAATTAAGATA+TGG | + | chr1_2:3060140-3060159 | None:intergenic | 40.0% | |
TCCTCTAGCAAAAGATCCAA+CGG | + | chr1_2:3060249-3060268 | None:intergenic | 40.0% | |
! | GGATTTGATGGATCAAGATC+TGG | - | chr1_2:3060317-3060336 | Msa0049650:intron | 40.0% |
! | TTTGATGGATCAAGATCTGG+TGG | - | chr1_2:3060320-3060339 | Msa0049650:intron | 40.0% |
ATTCCTCCAAACCTTCAGAA+AGG | - | chr1_2:3060354-3060373 | Msa0049650:intron | 40.0% | |
ACAATGAAACTCAGCAGTGT+CGG | + | chr1_2:3060583-3060602 | None:intergenic | 40.0% | |
TGCAGTTTCACACTGTTAGA+TGG | + | chr1_2:3061049-3061068 | None:intergenic | 40.0% | |
CATCAACAGCGATCTTTGTA+TGG | - | chr1_2:3061134-3061153 | Msa0049650:CDS | 40.0% | |
TCTTTGTATGGGTTTGGATC+CGG | - | chr1_2:3061146-3061165 | Msa0049650:CDS | 40.0% | |
TCTACCATAAGGGTTTGAAC+CGG | + | chr1_2:3061168-3061187 | None:intergenic | 40.0% | |
AGAGATAGCCTCTACCATAA+GGG | + | chr1_2:3061178-3061197 | None:intergenic | 40.0% | |
ATTAGCACTAAGGCCAGAAA+TGG | + | chr1_2:3061231-3061250 | None:intergenic | 40.0% | |
AGCTCCTATCATTAGCACTA+AGG | + | chr1_2:3061241-3061260 | None:intergenic | 40.0% | |
!!! | TTTTTCAGCTTTGAAGCCCT+TGG | + | chr1_2:3061362-3061381 | None:intergenic | 40.0% |
GAGTGATTCATCTTGGAACT+TGG | + | chr1_2:3061441-3061460 | None:intergenic | 40.0% | |
TCCAAGATGAATCACTCAAC+CGG | - | chr1_2:3061444-3061463 | Msa0049650:intron | 40.0% | |
CTAGTACACCAAATGGAAAC+AGG | - | chr1_2:3061564-3061583 | Msa0049650:intron | 40.0% | |
! | CATCTTGTTTCTCCTTTGCT+TGG | + | chr1_2:3061610-3061629 | None:intergenic | 40.0% |
CTGTTTCCTGTAACAAACCT+TGG | - | chr1_2:3061738-3061757 | Msa0049650:intron | 40.0% | |
!! | TCTGAACCAAGGTTTGTTAC+AGG | + | chr1_2:3061747-3061766 | None:intergenic | 40.0% |
ATATACTGGGGTCTCATCTT+AGG | - | chr1_2:3061943-3061962 | Msa0049650:intron | 40.0% | |
! | ATTTGGCTTATAGCTTCCCT+TGG | + | chr1_2:3062059-3062078 | None:intergenic | 40.0% |
! | TTTTGGACTAAATGCAGGAC+AGG | - | chr1_2:3062111-3062130 | Msa0049650:intron | 40.0% |
TTTGGACTAAATGCAGGACA+GGG | - | chr1_2:3062112-3062131 | Msa0049650:intron | 40.0% | |
AAATGCAGGACAGGGATTTA+TGG | - | chr1_2:3062120-3062139 | Msa0049650:intron | 40.0% | |
! | TGACAGGGATTTTTCCAACA+AGG | - | chr1_2:3062161-3062180 | Msa0049650:intron | 40.0% |
! | GACAGGGATTTTTCCAACAA+GGG | - | chr1_2:3062162-3062181 | Msa0049650:intron | 40.0% |
ACGCTCTTGTCAAAATTGAC+AGG | + | chr1_2:3062383-3062402 | None:intergenic | 40.0% | |
!! | TGTCAATTTTGACAAGAGCG+TGG | - | chr1_2:3062382-3062401 | Msa0049650:intron | 40.0% |
ATGTGACGAAACTGACTGTT+CGG | + | chr1_2:3062473-3062492 | None:intergenic | 40.0% | |
! | AGTATCTCGACTGTTGGTAA+CGG | + | chr1_2:3062522-3062541 | None:intergenic | 40.0% |
CGTGAAACTTAAAGGACTCA+GGG | + | chr1_2:3062622-3062641 | None:intergenic | 40.0% | |
ACGTGAAACTTAAAGGACTC+AGG | + | chr1_2:3062623-3062642 | None:intergenic | 40.0% | |
TTCAGATAGGTCCTTAACGA+AGG | - | chr1_2:3062705-3062724 | Msa0049650:intron | 40.0% | |
TTAAGGCCAAATACCTCTCT+GGG | + | chr1_2:3062864-3062883 | None:intergenic | 40.0% | |
! | TTTAAGGCCAAATACCTCTC+TGG | + | chr1_2:3062865-3062884 | None:intergenic | 40.0% |
! | GTGTCGCTCCAGTAAAAATT+CGG | - | chr1_2:3063008-3063027 | Msa0049650:intron | 40.0% |
AAGGTGGTGACTATAAGTTG+AGG | + | chr1_2:3063041-3063060 | None:intergenic | 40.0% | |
GTACTATGATATACTCCCTC+CGG | - | chr1_2:3063202-3063221 | Msa0049650:intron | 40.0% | |
CTTCTTATATTAAGGACCGG+AGG | + | chr1_2:3063221-3063240 | None:intergenic | 40.0% | |
! | TCCTATCATACTTTGGGGAT+CGG | - | chr1_2:3063546-3063565 | Msa0049650:intron | 40.0% |
!! | AAAAAGGATAGCGGGAAATC+AGG | + | chr1_2:3063611-3063630 | None:intergenic | 40.0% |
TGAAACTGATACGTCTATCC+TGG | - | chr1_2:3063805-3063824 | Msa0049650:intron | 40.0% | |
TTTCTATGAAGATCGGCAGA+AGG | - | chr1_2:3063838-3063857 | Msa0049650:intron | 40.0% | |
CAAAGTAGCATAATGCCTAC+TGG | - | chr1_2:3063887-3063906 | Msa0049650:CDS | 40.0% | |
!! | AATGCCTACTGGATTAGTTG+GGG | - | chr1_2:3063898-3063917 | Msa0049650:CDS | 40.0% |
AGAGGGTAACTTATCTCTGT+TGG | + | chr1_2:3064035-3064054 | None:intergenic | 40.0% | |
AGTCACTAAAATGCCTTCAC+CGG | + | chr1_2:3064086-3064105 | None:intergenic | 40.0% | |
ATGCATCGGGTAATGAAAGT+CGG | - | chr1_2:3064160-3064179 | Msa0049650:intron | 40.0% | |
GCAAGGACCAAAAGTCATGA+TGG | - | chr1_2:3055638-3055657 | Msa0049650:intron | 45.0% | |
AGACACAAGTGGAAGATCTG+TGG | - | chr1_2:3056004-3056023 | Msa0049650:intron | 45.0% | |
AAGATCTGTGGTCCCATTAG+TGG | - | chr1_2:3056016-3056035 | Msa0049650:intron | 45.0% | |
AGAGAGAGAGAGAGAGAAAG+AGG | + | chr1_2:3056080-3056099 | None:intergenic | 45.0% | |
GTGTTCTTGGTTGAATGCAC+TGG | + | chr1_2:3056492-3056511 | None:intergenic | 45.0% | |
CAAGATGGATGAATGGCTTG+AGG | - | chr1_2:3056685-3056704 | Msa0049650:CDS | 45.0% | |
ATGAATGGCTTGAGGGTCTT+GGG | - | chr1_2:3056693-3056712 | Msa0049650:CDS | 45.0% | |
! | GATGACATTTTGCTGCCCAA+CGG | + | chr1_2:3057067-3057086 | None:intergenic | 45.0% |
! | AAGTTGGTTGAATGTCGCCT+TGG | - | chr1_2:3057192-3057211 | Msa0049650:intron | 45.0% |
AGTTGGTTGAATGTCGCCTT+GGG | - | chr1_2:3057193-3057212 | Msa0049650:intron | 45.0% | |
GACGGGTAGATTCTGTAGTA+AGG | - | chr1_2:3057231-3057250 | Msa0049650:intron | 45.0% | |
GATAGATAGTAGCCAATCGG+AGG | - | chr1_2:3057265-3057284 | Msa0049650:intron | 45.0% | |
! | TGAGCCTTATCCCAGTAGAT+GGG | + | chr1_2:3057408-3057427 | None:intergenic | 45.0% |
TGGAACTCTACAGTGGACAT+TGG | - | chr1_2:3057476-3057495 | Msa0049650:intron | 45.0% | |
ACCATAAGAGATCACATGGC+GGG | - | chr1_2:3057501-3057520 | Msa0049650:CDS | 45.0% | |
TCCCAGGGTACAACAACTAT+AGG | - | chr1_2:3057944-3057963 | Msa0049650:CDS | 45.0% | |
GACCTATAGTTGTTGTACCC+TGG | + | chr1_2:3057949-3057968 | None:intergenic | 45.0% | |
!!! | CAGTCAGGATCTTTTGGTTC+AGG | - | chr1_2:3057989-3058008 | Msa0049650:CDS | 45.0% |
ACCTCCATAGTAGAAAGCCT+GGG | + | chr1_2:3058059-3058078 | None:intergenic | 45.0% | |
AACCTCCATAGTAGAAAGCC+TGG | + | chr1_2:3058060-3058079 | None:intergenic | 45.0% | |
ATAGACCACCCTAGGAAGTT+CGG | - | chr1_2:3058152-3058171 | Msa0049650:intron | 45.0% | |
CACAATTGCCGAACTTCCTA+GGG | + | chr1_2:3058163-3058182 | None:intergenic | 45.0% | |
TCACAATTGCCGAACTTCCT+AGG | + | chr1_2:3058164-3058183 | None:intergenic | 45.0% | |
GTATTGTTATGCGTGTCTCC+TGG | + | chr1_2:3058382-3058401 | None:intergenic | 45.0% | |
ACACATAGCAGAGACACCAA+TGG | - | chr1_2:3058439-3058458 | Msa0049650:intron | 45.0% | |
TCAACGAGATGATCTTGAGC+TGG | - | chr1_2:3058607-3058626 | Msa0049650:intron | 45.0% | |
CTTCTCCTCTACACTAGATC+TGG | - | chr1_2:3058847-3058866 | Msa0049650:CDS | 45.0% | |
CAAATGGACCGAAAGCAATG+AGG | - | chr1_2:3059110-3059129 | Msa0049650:CDS | 45.0% | |
GGCATTTGAATGACCTGAGT+TGG | + | chr1_2:3059159-3059178 | None:intergenic | 45.0% | |
TTGACAATGGCAATGGCGAA+TGG | - | chr1_2:3059788-3059807 | Msa0049650:intron | 45.0% | |
TGACAATGGCAATGGCGAAT+GGG | - | chr1_2:3059789-3059808 | Msa0049650:intron | 45.0% | |
GGTTGAAGCCATATCCAGAA+TGG | + | chr1_2:3059980-3059999 | None:intergenic | 45.0% | |
GGTGTATGGAAATTGCTGAG+GGG | + | chr1_2:3060078-3060097 | None:intergenic | 45.0% | |
GGGTGTATGGAAATTGCTGA+GGG | + | chr1_2:3060079-3060098 | None:intergenic | 45.0% | |
CCCACCTTATTACAACCATC+TGG | - | chr1_2:3060097-3060116 | Msa0049650:intron | 45.0% | |
CTAGCAAAAGATCCAACGGA+AGG | + | chr1_2:3060245-3060264 | None:intergenic | 45.0% | |
! | TCCGTTGGATCTTTTGCTAG+AGG | - | chr1_2:3060245-3060264 | Msa0049650:intron | 45.0% |
ATGAAAGCTGAAGGAACCAG+GGG | + | chr1_2:3060285-3060304 | None:intergenic | 45.0% | |
CATGAAAGCTGAAGGAACCA+GGG | + | chr1_2:3060286-3060305 | None:intergenic | 45.0% | |
TCATGAAAGCTGAAGGAACC+AGG | + | chr1_2:3060287-3060306 | None:intergenic | 45.0% | |
AAAGACCTCTGCCTTTCTGA+AGG | + | chr1_2:3060368-3060387 | None:intergenic | 45.0% | |
TGAGGAACAGAAGGAGATAG+AGG | + | chr1_2:3060395-3060414 | None:intergenic | 45.0% | |
ATTGGCTGTTGAGGAACAGA+AGG | + | chr1_2:3060404-3060423 | None:intergenic | 45.0% | |
TCTGTTCCTCAACAGCCAAT+TGG | - | chr1_2:3060404-3060423 | Msa0049650:intron | 45.0% | |
AATGACCTGACAGAGCCAAT+TGG | + | chr1_2:3060422-3060441 | None:intergenic | 45.0% | |
!! | ATTGGCTCTGTCAGGTCATT+TGG | - | chr1_2:3060422-3060441 | Msa0049650:intron | 45.0% |
!! | TTGGCTCTGTCAGGTCATTT+GGG | - | chr1_2:3060423-3060442 | Msa0049650:intron | 45.0% |
! | TTTAAAACTCTTGCCAGGGC+GGG | + | chr1_2:3060757-3060776 | None:intergenic | 45.0% |
!! | CTTTAAAACTCTTGCCAGGG+CGG | + | chr1_2:3060758-3060777 | None:intergenic | 45.0% |
TACAGTTTCACACTGCTGGA+TGG | + | chr1_2:3061018-3061037 | None:intergenic | 45.0% | |
GTTCTACAGTTTCACACTGC+TGG | + | chr1_2:3061022-3061041 | None:intergenic | 45.0% | |
TGGACTATACCCTTCTTTGC+AGG | - | chr1_2:3061106-3061125 | Msa0049650:CDS | 45.0% | |
GATGAGAAGCCTGCAAAGAA+GGG | + | chr1_2:3061118-3061137 | None:intergenic | 45.0% | |
TGATGAGAAGCCTGCAAAGA+AGG | + | chr1_2:3061119-3061138 | None:intergenic | 45.0% | |
CAGCGATCTTTGTATGGGTT+TGG | - | chr1_2:3061140-3061159 | Msa0049650:CDS | 45.0% | |
GGTTCAAACCCTTATGGTAG+AGG | - | chr1_2:3061167-3061186 | Msa0049650:CDS | 45.0% | |
GAGAGATAGCCTCTACCATA+AGG | + | chr1_2:3061179-3061198 | None:intergenic | 45.0% | |
!! | CTGGCCTTAGTGCTAATGAT+AGG | - | chr1_2:3061234-3061253 | Msa0049650:intron | 45.0% |
CTTGAAAATAGCAGACGGCA+CGG | - | chr1_2:3061269-3061288 | Msa0049650:intron | 45.0% | |
AATCAGTGGCAAAATCTGGC+CGG | + | chr1_2:3061466-3061485 | None:intergenic | 45.0% | |
CTTGGCATCCTTGAAATCAG+TGG | + | chr1_2:3061480-3061499 | None:intergenic | 45.0% | |
TGCTGCATATTGCCAAGCAA+AGG | - | chr1_2:3061595-3061614 | Msa0049650:intron | 45.0% | |
GAGGATAGTCCAACAGTTAG+AGG | - | chr1_2:3062023-3062042 | Msa0049650:intron | 45.0% | |
ATGCTAGTGCTAGTGCTCAT+TGG | - | chr1_2:3062271-3062290 | Msa0049650:intron | 45.0% | |
TGCTAGTGCTAGTGCTCATT+GGG | - | chr1_2:3062272-3062291 | Msa0049650:intron | 45.0% | |
ACTGAGCACTAGCATTTACC+TGG | + | chr1_2:3062334-3062353 | None:intergenic | 45.0% | |
AATGCTAGTGCTCAGTTCTG+CGG | - | chr1_2:3062338-3062357 | Msa0049650:intron | 45.0% | |
ACTTCTGGCAGCAAGATAAG+TGG | - | chr1_2:3062405-3062424 | Msa0049650:intron | 45.0% | |
!! | GTATCTCGACTGTTGGTAAC+GGG | + | chr1_2:3062521-3062540 | None:intergenic | 45.0% |
TACCAACAGTCGAGATACTC+AGG | - | chr1_2:3062523-3062542 | Msa0049650:intron | 45.0% | |
GAAACTTAAAGGACTCAGGG+AGG | + | chr1_2:3062619-3062638 | None:intergenic | 45.0% | |
GAAACTTAAAGGACCCAGAG+AGG | - | chr1_2:3062848-3062867 | Msa0049650:intron | 45.0% | |
!! | AAAGGACCCAGAGAGGTATT+TGG | - | chr1_2:3062855-3062874 | Msa0049650:intron | 45.0% |
AGACATTACACCTCGAAACC+TGG | - | chr1_2:3062949-3062968 | Msa0049650:intron | 45.0% | |
CAAAATGCAACCAGGTTTCG+AGG | + | chr1_2:3062962-3062981 | None:intergenic | 45.0% | |
!! | ATGCCTACTGGATTAGTTGG+GGG | - | chr1_2:3063899-3063918 | Msa0049650:CDS | 45.0% |
AGGAGTTCTTCTGACAGTAC+TGG | - | chr1_2:3063932-3063951 | Msa0049650:intron | 45.0% | |
CGTTATTGTTGTCGTCCAAG+CGG | + | chr1_2:3064000-3064019 | None:intergenic | 45.0% | |
TTACTGGTGGGAACATCAGA+GGG | + | chr1_2:3064052-3064071 | None:intergenic | 45.0% | |
ATTACTGGTGGGAACATCAG+AGG | + | chr1_2:3064053-3064072 | None:intergenic | 45.0% | |
GTCACTAAAATGCCTTCACC+GGG | + | chr1_2:3064085-3064104 | None:intergenic | 45.0% | |
!! | CTAACTGGTTTGCGTTGAAG+AGG | + | chr1_2:3064110-3064129 | None:intergenic | 45.0% |
CTTCAACGCAAACCAGTTAG+TGG | - | chr1_2:3064110-3064129 | Msa0049650:intron | 45.0% | |
TCAACAGTCTTGCCACTAAC+TGG | + | chr1_2:3064125-3064144 | None:intergenic | 45.0% | |
AGACTGTTGATCACATCAGC+CGG | - | chr1_2:3064135-3064154 | Msa0049650:intron | 45.0% | |
TTCATTACCCGATGCATAGC+CGG | + | chr1_2:3064157-3064176 | None:intergenic | 45.0% | |
TGCATCGGGTAATGAAAGTC+GGG | - | chr1_2:3064161-3064180 | Msa0049650:intron | 45.0% | |
GTCATTGGGGTTTCCAAAAG+AGG | - | chr1_2:3064251-3064270 | Msa0049650:five_prime_UTR | 45.0% | |
ATTGGGGTTTCCAAAAGAGG+TGG | - | chr1_2:3064254-3064273 | Msa0049650:five_prime_UTR | 45.0% | |
! | GCAAAGGTGTAATGTATGGG+AGG | + | chr1_2:3064350-3064369 | None:intergenic | 45.0% |
!!! | AAATTTTTGTTTAATAATTT+TGG | - | chr1_2:3064403-3064422 | Msa0049650:five_prime_UTR | 5.0% |
!!! | AATTTTTGTTTAATAATTTT+GGG | - | chr1_2:3064404-3064423 | Msa0049650:five_prime_UTR | 5.0% |
CTGCATCACAGTGACTCGTA+TGG | + | chr1_2:3055205-3055224 | None:intergenic | 50.0% | |
CATACGAGTCACTGTGATGC+AGG | - | chr1_2:3055203-3055222 | Msa0049650:CDS | 50.0% | |
ACGCATGCGTAACACGAATG+TGG | + | chr1_2:3056163-3056182 | None:intergenic | 50.0% | |
GATGAATGGCTTGAGGGTCT+TGG | - | chr1_2:3056692-3056711 | Msa0049650:CDS | 50.0% | |
TGTTGTATGGGAAGGACCGT+TGG | - | chr1_2:3057048-3057067 | Msa0049650:intron | 50.0% | |
GTTGTATGGGAAGGACCGTT+GGG | - | chr1_2:3057049-3057068 | Msa0049650:intron | 50.0% | |
ACAGCACAGCGTTCTCATCT+TGG | + | chr1_2:3057111-3057130 | None:intergenic | 50.0% | |
ATAGTAGCCAATCGGAGGCT+GGG | - | chr1_2:3057270-3057289 | Msa0049650:intron | 50.0% | |
! | CTTATCCCAGTAGATGGGCT+CGG | + | chr1_2:3057403-3057422 | None:intergenic | 50.0% |
! | CTGAGCCTTATCCCAGTAGA+TGG | + | chr1_2:3057409-3057428 | None:intergenic | 50.0% |
CCATAAGAGATCACATGGCG+GGG | - | chr1_2:3057502-3057521 | Msa0049650:CDS | 50.0% | |
CGTCAGAGATGACACAACGA+AGG | - | chr1_2:3057540-3057559 | Msa0049650:CDS | 50.0% | |
TGTGTGTGTGTGAGAGAGAG+AGG | + | chr1_2:3057777-3057796 | None:intergenic | 50.0% | |
CGGGATATCACAAGTCAGTC+AGG | - | chr1_2:3057974-3057993 | Msa0049650:CDS | 50.0% | |
! | TACACATTGGGAGGGTACAG+AGG | + | chr1_2:3058025-3058044 | None:intergenic | 50.0% |
ATAGTAGAAAGCCTGGGCCT+GGG | + | chr1_2:3058053-3058072 | None:intergenic | 50.0% | |
TATGCGCAATAGACCACCCT+AGG | - | chr1_2:3058144-3058163 | Msa0049650:intron | 50.0% | |
AATTGCCGAACTTCCTAGGG+TGG | + | chr1_2:3058160-3058179 | None:intergenic | 50.0% | |
GCCATATGGACCATATTCCC+CGG | - | chr1_2:3060007-3060026 | Msa0049650:intron | 50.0% | |
ACCGGGGAATATGGTCCATA+TGG | + | chr1_2:3060011-3060030 | None:intergenic | 50.0% | |
GGGGTGTATGGAAATTGCTG+AGG | + | chr1_2:3060080-3060099 | None:intergenic | 50.0% | |
AGTTTGGAGGAGGAACCAGA+TGG | + | chr1_2:3060115-3060134 | None:intergenic | 50.0% | |
TCTGGCTGAGAAACTGGAGT+CGG | + | chr1_2:3060155-3060174 | None:intergenic | 50.0% | |
! | GTAAGCTCTGGCTGAGAAAC+TGG | + | chr1_2:3060161-3060180 | None:intergenic | 50.0% |
CCTAGCAGGTTAGTAAGCTC+TGG | + | chr1_2:3060173-3060192 | None:intergenic | 50.0% | |
CCAGAGCTTACTAACCTGCT+AGG | - | chr1_2:3060170-3060189 | Msa0049650:intron | 50.0% | |
!! | ACGGAAGGATAGCTTGCTCT+TGG | + | chr1_2:3060230-3060249 | None:intergenic | 50.0% |
AGAGCAAGCTATCCTTCCGT+TGG | - | chr1_2:3060230-3060249 | Msa0049650:intron | 50.0% | |
!! | GATCAAGATCTGGTGGACTC+TGG | - | chr1_2:3060327-3060346 | Msa0049650:intron | 50.0% |
!! | AAGATCTGGTGGACTCTGGT+CGG | - | chr1_2:3060331-3060350 | Msa0049650:intron | 50.0% |
! | CTGCCTTTCTGAAGGTTTGG+AGG | + | chr1_2:3060360-3060379 | None:intergenic | 50.0% |
! | CCTCTGCCTTTCTGAAGGTT+TGG | + | chr1_2:3060363-3060382 | None:intergenic | 50.0% |
CCAAACCTTCAGAAAGGCAG+AGG | - | chr1_2:3060360-3060379 | Msa0049650:intron | 50.0% | |
ACAGAGCCAATTGGCTGTTG+AGG | + | chr1_2:3060413-3060432 | None:intergenic | 50.0% | |
!! | AACAGCCAATTGGCTCTGTC+AGG | - | chr1_2:3060414-3060433 | Msa0049650:intron | 50.0% |
!! | ATTTGGGCTGAGTGCTGGAA+TGG | - | chr1_2:3060439-3060458 | Msa0049650:intron | 50.0% |
TTAAAACTCTTGCCAGGGCG+GGG | + | chr1_2:3060756-3060775 | None:intergenic | 50.0% | |
GGATCCGGTTCAAACCCTTA+TGG | - | chr1_2:3061161-3061180 | Msa0049650:CDS | 50.0% | |
AGAGGCTATCTCTCTAACCC+CGG | - | chr1_2:3061185-3061204 | Msa0049650:CDS | 50.0% | |
!! | TCTAACCCCGGTTCTAGCTT+TGG | - | chr1_2:3061197-3061216 | Msa0049650:intron | 50.0% |
ATCCTCAGTGAGCAAAACCG+AGG | - | chr1_2:3061335-3061354 | Msa0049650:intron | 50.0% | |
TGAGCAAAACCGAGGACCAA+GGG | - | chr1_2:3061343-3061362 | Msa0049650:intron | 50.0% | |
GCCGGTTGAGTGATTCATCT+TGG | + | chr1_2:3061448-3061467 | None:intergenic | 50.0% | |
!! | GTCTGGGCTAGTACACCAAA+TGG | - | chr1_2:3061557-3061576 | Msa0049650:intron | 50.0% |
CTCTCTCGACCTCTAACTGT+TGG | + | chr1_2:3062035-3062054 | None:intergenic | 50.0% | |
TTAGAGGTCGAGAGAGACCA+AGG | - | chr1_2:3062039-3062058 | Msa0049650:intron | 50.0% | |
TAGAGGTCGAGAGAGACCAA+GGG | - | chr1_2:3062040-3062059 | Msa0049650:intron | 50.0% | |
AGTGCTAGTGCTCATTGGGT+AGG | - | chr1_2:3062276-3062295 | Msa0049650:intron | 50.0% | |
GTTCTGCGGAGTAGCTGAAA+TGG | - | chr1_2:3062352-3062371 | Msa0049650:intron | 50.0% | |
TGCGGAGTAGCTGAAATGGT+TGG | - | chr1_2:3062356-3062375 | Msa0049650:intron | 50.0% | |
! | TTGACAAGAGCGTGGACTTC+TGG | - | chr1_2:3062390-3062409 | Msa0049650:intron | 50.0% |
TGGCAGCAAGATAAGTGGAG+TGG | - | chr1_2:3062410-3062429 | Msa0049650:intron | 50.0% | |
GGCAGCAAGATAAGTGGAGT+GGG | - | chr1_2:3062411-3062430 | Msa0049650:intron | 50.0% | |
CTCCTGAGTATCTCGACTGT+TGG | + | chr1_2:3062528-3062547 | None:intergenic | 50.0% | |
CAACAGTCGAGATACTCAGG+AGG | - | chr1_2:3062526-3062545 | Msa0049650:intron | 50.0% | |
AGTCGAGATACTCAGGAGGT+AGG | - | chr1_2:3062530-3062549 | Msa0049650:intron | 50.0% | |
ACTCAGGAGGTAGGAATCTG+TGG | - | chr1_2:3062539-3062558 | Msa0049650:intron | 50.0% | |
! | TGGGTGCTACATCGAGTTCA+AGG | + | chr1_2:3063508-3063527 | None:intergenic | 50.0% |
AGTATAGCAGGCAGCGGTAT+GGG | + | chr1_2:3063527-3063546 | None:intergenic | 50.0% | |
! | GATAGGAGTATAGCAGGCAG+CGG | + | chr1_2:3063533-3063552 | None:intergenic | 50.0% |
GCCGATCCCCAAAGTATGAT+AGG | + | chr1_2:3063550-3063569 | None:intergenic | 50.0% | |
GAAGGCCATGCAAGAACGAA+AGG | - | chr1_2:3063856-3063875 | Msa0049650:intron | 50.0% | |
CCTTGCCTTTCGTTCTTGCA+TGG | + | chr1_2:3063864-3063883 | None:intergenic | 50.0% | |
CCATGCAAGAACGAAAGGCA+AGG | - | chr1_2:3063861-3063880 | Msa0049650:intron | 50.0% | |
!! | TGCCTACTGGATTAGTTGGG+GGG | - | chr1_2:3063900-3063919 | Msa0049650:CDS | 50.0% |
! | CTTTTCTCTGGTTGTCCGCT+TGG | - | chr1_2:3063982-3064001 | Msa0049650:intron | 50.0% |
!! | AGGAGGCTGTGATGGTGGTT+GGG | + | chr1_2:3054930-3054949 | None:intergenic | 55.0% |
TCAAGAGGAGGCTGTGATGG+TGG | + | chr1_2:3054935-3054954 | None:intergenic | 55.0% | |
CGATCAAGAGGAGGCTGTGA+TGG | + | chr1_2:3054938-3054957 | None:intergenic | 55.0% | |
TGTCGCCTTGGGTGTTTGTG+TGG | - | chr1_2:3057204-3057223 | Msa0049650:intron | 55.0% | |
CTCCTCCACACAAACACCCA+AGG | + | chr1_2:3057212-3057231 | None:intergenic | 55.0% | |
GGGTGTTTGTGTGGAGGAGA+CGG | - | chr1_2:3057213-3057232 | Msa0049650:intron | 55.0% | |
GGTGTTTGTGTGGAGGAGAC+GGG | - | chr1_2:3057214-3057233 | Msa0049650:intron | 55.0% | |
GATAGTAGCCAATCGGAGGC+TGG | - | chr1_2:3057269-3057288 | Msa0049650:intron | 55.0% | |
TAGTAGCCAATCGGAGGCTG+GGG | - | chr1_2:3057271-3057290 | Msa0049650:intron | 55.0% | |
! | AGTAGATGGGCTCGGCTACT+TGG | + | chr1_2:3057395-3057414 | None:intergenic | 55.0% |
AAGTAGCCGAGCCCATCTAC+TGG | - | chr1_2:3057394-3057413 | Msa0049650:intron | 55.0% | |
AGTAGCCGAGCCCATCTACT+GGG | - | chr1_2:3057395-3057414 | Msa0049650:intron | 55.0% | |
CGAGCCCATCTACTGGGATA+AGG | - | chr1_2:3057401-3057420 | Msa0049650:intron | 55.0% | |
GGGATAAGGCTCAGTCGTTG+CGG | - | chr1_2:3057415-3057434 | Msa0049650:intron | 55.0% | |
ATAAGGCTCAGTCGTTGCGG+TGG | - | chr1_2:3057418-3057437 | Msa0049650:intron | 55.0% | |
CCCCGCCATGTGATCTCTTA+TGG | + | chr1_2:3057505-3057524 | None:intergenic | 55.0% | |
GGGGTGCATACACATTGGGA+GGG | + | chr1_2:3058033-3058052 | None:intergenic | 55.0% | |
TGGGGTGCATACACATTGGG+AGG | + | chr1_2:3058034-3058053 | None:intergenic | 55.0% | |
TCCCAATGTGTATGCACCCC+AGG | - | chr1_2:3058033-3058052 | Msa0049650:intron | 55.0% | |
GCCTGGGGTGCATACACATT+GGG | + | chr1_2:3058037-3058056 | None:intergenic | 55.0% | |
TAGTAGAAAGCCTGGGCCTG+GGG | + | chr1_2:3058052-3058071 | None:intergenic | 55.0% | |
CATAGTAGAAAGCCTGGGCC+TGG | + | chr1_2:3058054-3058073 | None:intergenic | 55.0% | |
CAGGCCCAGGCTTTCTACTA+TGG | - | chr1_2:3058052-3058071 | Msa0049650:intron | 55.0% | |
GCCCAGGCTTTCTACTATGG+AGG | - | chr1_2:3058055-3058074 | Msa0049650:intron | 55.0% | |
GGTGGCCAGATCTAGTGTAG+AGG | + | chr1_2:3058855-3058874 | None:intergenic | 55.0% | |
AAGGCAAAGGCGAGGTAACC+GGG | + | chr1_2:3060028-3060047 | None:intergenic | 55.0% | |
GAAGGCAAAGGCGAGGTAAC+CGG | + | chr1_2:3060029-3060048 | None:intergenic | 55.0% | |
ACCTCGCCTTTGCCTTCTGT+AGG | - | chr1_2:3060032-3060051 | Msa0049650:intron | 55.0% | |
CCTCGCCTTTGCCTTCTGTA+GGG | - | chr1_2:3060033-3060052 | Msa0049650:intron | 55.0% | |
CTCGCCTTTGCCTTCTGTAG+GGG | - | chr1_2:3060034-3060053 | Msa0049650:intron | 55.0% | |
TCGCCTTTGCCTTCTGTAGG+GGG | - | chr1_2:3060035-3060054 | Msa0049650:intron | 55.0% | |
TCTCCCCCTACAGAAGGCAA+AGG | + | chr1_2:3060041-3060060 | None:intergenic | 55.0% | |
CTTGCTGGTCAATGCCTAGC+AGG | + | chr1_2:3060187-3060206 | None:intergenic | 55.0% | |
AGGTCATTTGGGCTGAGTGC+TGG | - | chr1_2:3060434-3060453 | Msa0049650:intron | 55.0% | |
TAAAACTCTTGCCAGGGCGG+GGG | + | chr1_2:3060755-3060774 | None:intergenic | 55.0% | |
!! | AACCCCGGTTCTAGCTTTGG+AGG | - | chr1_2:3061200-3061219 | Msa0049650:intron | 55.0% |
AGCCTCCAAAGCTAGAACCG+GGG | + | chr1_2:3061205-3061224 | None:intergenic | 55.0% | |
GAGCCTCCAAAGCTAGAACC+GGG | + | chr1_2:3061206-3061225 | None:intergenic | 55.0% | |
CGAGCCTCCAAAGCTAGAAC+CGG | + | chr1_2:3061207-3061226 | None:intergenic | 55.0% | |
!! | CGGTTCTAGCTTTGGAGGCT+CGG | - | chr1_2:3061205-3061224 | Msa0049650:intron | 55.0% |
TTTGGAGGCTCGGCCATTTC+TGG | - | chr1_2:3061215-3061234 | Msa0049650:intron | 55.0% | |
AAAATAGCAGACGGCACGGC+AGG | - | chr1_2:3061273-3061292 | Msa0049650:intron | 55.0% | |
AAATAGCAGACGGCACGGCA+GGG | - | chr1_2:3061274-3061293 | Msa0049650:intron | 55.0% | |
! | GTCCTCGGTTTTGCTCACTG+AGG | + | chr1_2:3061340-3061359 | None:intergenic | 55.0% |
GTGAGCAAAACCGAGGACCA+AGG | - | chr1_2:3061342-3061361 | Msa0049650:intron | 55.0% | |
!! | GCTTTGAAGCCCTTGGTCCT+CGG | + | chr1_2:3061355-3061374 | None:intergenic | 55.0% |
GTGGGCAGTTTCCTGTGAAG+TGG | - | chr1_2:3062429-3062448 | Msa0049650:intron | 55.0% | |
GAGTATAGCAGGCAGCGGTA+TGG | + | chr1_2:3063528-3063547 | None:intergenic | 55.0% | |
CTCCCCCCAACTAATCCAGT+AGG | + | chr1_2:3063905-3063924 | None:intergenic | 55.0% | |
TAGTTGGGGGGAGTGAGCAT+AGG | - | chr1_2:3063912-3063931 | Msa0049650:intron | 55.0% | |
CACATCAGCCGGCTATGCAT+CGG | - | chr1_2:3064146-3064165 | Msa0049650:intron | 55.0% | |
ACATCAGCCGGCTATGCATC+GGG | - | chr1_2:3064147-3064166 | Msa0049650:intron | 55.0% | |
!! | GAGGAGGCTGTGATGGTGGT+TGG | + | chr1_2:3054931-3054950 | None:intergenic | 60.0% |
! | GTGGTGGGACGATCAAGAGG+AGG | + | chr1_2:3054947-3054966 | None:intergenic | 60.0% |
! | CCTGTGGTGGGACGATCAAG+AGG | + | chr1_2:3054950-3054969 | None:intergenic | 60.0% |
CCTCTTGATCGTCCCACCAC+AGG | - | chr1_2:3054947-3054966 | Msa0049650:three_prime_UTR | 60.0% | |
CGCCTTGGGTGTTTGTGTGG+AGG | - | chr1_2:3057207-3057226 | Msa0049650:intron | 60.0% | |
!! | CGGTGGTGGTGGATGTGGAA+TGG | - | chr1_2:3057435-3057454 | Msa0049650:intron | 60.0% |
GGCCTGGGGTGCATACACAT+TGG | + | chr1_2:3058038-3058057 | None:intergenic | 60.0% | |
GGCGAGGTAACCGGGGAATA+TGG | + | chr1_2:3060020-3060039 | None:intergenic | 60.0% | |
AGGCAAAGGCGAGGTAACCG+GGG | + | chr1_2:3060027-3060046 | None:intergenic | 60.0% | |
CCCTACAGAAGGCAAAGGCG+AGG | + | chr1_2:3060036-3060055 | None:intergenic | 60.0% | |
TGTGCGTCTCCCCCTACAGA+AGG | + | chr1_2:3060047-3060066 | None:intergenic | 60.0% | |
GGAAGCTTTCCTGTAGCCCC+TGG | - | chr1_2:3060266-3060285 | Msa0049650:intron | 60.0% | |
CTGAAGGAACCAGGGGCTAC+AGG | + | chr1_2:3060278-3060297 | None:intergenic | 60.0% | |
AAAACTCTTGCCAGGGCGGG+GGG | + | chr1_2:3060754-3060773 | None:intergenic | 60.0% | |
TAGCCAATCGGAGGCTGGGG+AGG | - | chr1_2:3057274-3057293 | Msa0049650:intron | 65.0% | |
AGCCAATCGGAGGCTGGGGA+GGG | - | chr1_2:3057275-3057294 | Msa0049650:intron | 65.0% | |
AGGCTCAGTCGTTGCGGTGG+TGG | - | chr1_2:3057421-3057440 | Msa0049650:intron | 65.0% | |
! | CTCAGTCGTTGCGGTGGTGG+TGG | - | chr1_2:3057424-3057443 | Msa0049650:intron | 65.0% |
!! | CGTTGCGGTGGTGGTGGATG+TGG | - | chr1_2:3057430-3057449 | Msa0049650:intron | 65.0% |
TGTGTATGCACCCCAGGCCC+AGG | - | chr1_2:3058039-3058058 | Msa0049650:intron | 65.0% | |
TGCCCTCCCCAGCCTCCGAT+TGG | + | chr1_2:3057280-3057299 | None:intergenic | 70.0% | |
TCCTTACCTGCCCCCCGCCC+TGG | - | chr1_2:3060741-3060760 | Msa0049650:intron | 75.0% | |
! | GCCAGGGCGGGGGGCAGGTA+AGG | + | chr1_2:3060745-3060764 | None:intergenic | 80.0% |
! | CTCTTGCCAGGGCGGGGGGC+AGG | + | chr1_2:3060750-3060769 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 3054655 | 3064499 | 3054655 | ID=Msa0049650;Name=Msa0049650 |
chr1_2 | mRNA | 3054655 | 3064499 | 3054655 | ID=Msa0049650-mRNA-1;Parent=Msa0049650;Name=Msa0049650-mRNA-1;_AED=0.12;_eAED=0.12;_QI=262|1|1|1|1|1|8|370|642 |
chr1_2 | exon | 3054655 | 3055396 | 3054655 | ID=Msa0049650-mRNA-1:exon:730;Parent=Msa0049650-mRNA-1 |
chr1_2 | exon | 3056607 | 3056819 | 3056607 | ID=Msa0049650-mRNA-1:exon:729;Parent=Msa0049650-mRNA-1 |
chr1_2 | exon | 3057499 | 3058026 | 3057499 | ID=Msa0049650-mRNA-1:exon:728;Parent=Msa0049650-mRNA-1 |
chr1_2 | exon | 3058694 | 3059209 | 3058694 | ID=Msa0049650-mRNA-1:exon:727;Parent=Msa0049650-mRNA-1 |
chr1_2 | exon | 3059293 | 3059369 | 3059293 | ID=Msa0049650-mRNA-1:exon:726;Parent=Msa0049650-mRNA-1 |
chr1_2 | exon | 3061078 | 3061204 | 3061078 | ID=Msa0049650-mRNA-1:exon:725;Parent=Msa0049650-mRNA-1 |
chr1_2 | exon | 3063886 | 3063929 | 3063886 | ID=Msa0049650-mRNA-1:exon:724;Parent=Msa0049650-mRNA-1 |
chr1_2 | exon | 3064186 | 3064499 | 3064186 | ID=Msa0049650-mRNA-1:exon:723;Parent=Msa0049650-mRNA-1 |
chr1_2 | five_prime_UTR | 3064238 | 3064499 | 3064238 | ID=Msa0049650-mRNA-1:five_prime_utr;Parent=Msa0049650-mRNA-1 |
chr1_2 | CDS | 3064186 | 3064237 | 3064186 | ID=Msa0049650-mRNA-1:cds;Parent=Msa0049650-mRNA-1 |
chr1_2 | CDS | 3063886 | 3063929 | 3063886 | ID=Msa0049650-mRNA-1:cds;Parent=Msa0049650-mRNA-1 |
chr1_2 | CDS | 3061078 | 3061204 | 3061078 | ID=Msa0049650-mRNA-1:cds;Parent=Msa0049650-mRNA-1 |
chr1_2 | CDS | 3059293 | 3059369 | 3059293 | ID=Msa0049650-mRNA-1:cds;Parent=Msa0049650-mRNA-1 |
chr1_2 | CDS | 3058694 | 3059209 | 3058694 | ID=Msa0049650-mRNA-1:cds;Parent=Msa0049650-mRNA-1 |
chr1_2 | CDS | 3057499 | 3058026 | 3057499 | ID=Msa0049650-mRNA-1:cds;Parent=Msa0049650-mRNA-1 |
chr1_2 | CDS | 3056607 | 3056819 | 3056607 | ID=Msa0049650-mRNA-1:cds;Parent=Msa0049650-mRNA-1 |
chr1_2 | CDS | 3055025 | 3055396 | 3055025 | ID=Msa0049650-mRNA-1:cds;Parent=Msa0049650-mRNA-1 |
chr1_2 | three_prime_UTR | 3054655 | 3055024 | 3054655 | ID=Msa0049650-mRNA-1:three_prime_utr;Parent=Msa0049650-mRNA-1 |
Gene Sequence |
Protein sequence |