Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713300 | XP_003611395.1 | 82.286 | 175 | 11 | 2 | 1 | 160 | 1 | 170 | 5.06e-95 | 290 |
| Msa0713300 | XP_003611395.1 | 86.339 | 183 | 14 | 3 | 161 | 343 | 2 | 173 | 4.02e-103 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713300 | sp|Q84R94|TI10A_ORYSJ | 43.030 | 165 | 79 | 3 | 175 | 327 | 53 | 214 | 1.31e-27 | 111 |
| Msa0713300 | sp|Q84R94|TI10A_ORYSJ | 38.037 | 163 | 69 | 4 | 16 | 147 | 53 | 214 | 1.64e-20 | 92.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713300 | G7JYL9 | 82.286 | 175 | 11 | 2 | 1 | 160 | 1 | 170 | 2.42e-95 | 290 |
| Msa0713300 | G7JYL9 | 86.339 | 183 | 14 | 3 | 161 | 343 | 2 | 173 | 1.92e-103 | 310 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0713300 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0713300 | Msa0755000 | 0.825935 | 3.573154e-54 | -8.615850e-47 |
| Msa0713300 | Msa0796920 | 0.887438 | 1.426737e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713300 | MtrunA17_Chr5g0399881 | 86.339 | 183 | 14 | 3 | 161 | 343 | 2 | 173 | 3.70e-107 | 310 |
| Msa0713300 | MtrunA17_Chr5g0399881 | 82.286 | 175 | 11 | 2 | 1 | 160 | 1 | 170 | 4.65e-99 | 290 |
| Msa0713300 | MtrunA17_Chr5g0399861 | 86.857 | 175 | 9 | 1 | 1 | 161 | 1 | 175 | 1.52e-106 | 309 |
| Msa0713300 | MtrunA17_Chr5g0399861 | 85.475 | 179 | 19 | 3 | 162 | 340 | 3 | 174 | 1.74e-105 | 306 |
| Msa0713300 | MtrunA17_Chr5g0399851 | 70.748 | 147 | 28 | 5 | 188 | 327 | 6 | 144 | 5.73e-62 | 194 |
| Msa0713300 | MtrunA17_Chr5g0399851 | 66.429 | 140 | 25 | 4 | 29 | 147 | 6 | 144 | 7.23e-54 | 174 |
| Msa0713300 | MtrunA17_Chr2g0301131 | 43.386 | 189 | 61 | 8 | 160 | 322 | 77 | 245 | 2.46e-32 | 121 |
| Msa0713300 | MtrunA17_Chr2g0301131 | 40.764 | 157 | 44 | 6 | 25 | 142 | 99 | 245 | 4.08e-24 | 99.4 |
| Msa0713300 | MtrunA17_Chr4g0070271 | 35.156 | 128 | 54 | 5 | 5 | 132 | 73 | 171 | 2.85e-13 | 67.8 |
| Msa0713300 | MtrunA17_Chr2g0302041 | 30.172 | 116 | 72 | 1 | 199 | 305 | 54 | 169 | 3.25e-12 | 65.1 |
| Msa0713300 | MtrunA17_Chr8g0344481 | 31.298 | 131 | 84 | 3 | 178 | 303 | 79 | 208 | 7.61e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713300 | AT1G19180.2 | 42.537 | 134 | 71 | 4 | 196 | 325 | 53 | 184 | 2.12e-25 | 101 |
| Msa0713300 | AT1G19180.2 | 36.364 | 132 | 61 | 3 | 37 | 145 | 53 | 184 | 8.79e-17 | 77.8 |
| Msa0713300 | AT1G19180.1 | 42.537 | 134 | 71 | 4 | 196 | 325 | 119 | 250 | 1.51e-24 | 100 |
| Msa0713300 | AT1G19180.1 | 36.364 | 132 | 61 | 3 | 37 | 145 | 119 | 250 | 2.77e-16 | 77.8 |
| Msa0713300 | AT1G19180.3 | 42.537 | 134 | 71 | 4 | 196 | 325 | 119 | 250 | 1.51e-24 | 100 |
| Msa0713300 | AT1G19180.3 | 36.364 | 132 | 61 | 3 | 37 | 145 | 119 | 250 | 2.77e-16 | 77.8 |
| Msa0713300 | AT1G74950.1 | 38.406 | 138 | 73 | 3 | 196 | 323 | 112 | 247 | 2.99e-20 | 89.0 |
| Msa0713300 | AT1G74950.1 | 42.342 | 111 | 48 | 2 | 37 | 131 | 112 | 222 | 2.65e-17 | 80.9 |
| Msa0713300 | AT1G74950.2 | 42.202 | 109 | 47 | 2 | 37 | 129 | 112 | 220 | 6.27e-17 | 79.0 |
| Msa0713300 | AT1G74950.2 | 40.000 | 110 | 56 | 2 | 196 | 295 | 112 | 221 | 4.64e-16 | 76.6 |
| Msa0713300 | AT1G17380.2 | 36.066 | 122 | 70 | 2 | 192 | 305 | 58 | 179 | 2.34e-14 | 72.4 |
| Msa0713300 | AT1G72450.1 | 37.391 | 115 | 60 | 3 | 198 | 304 | 101 | 211 | 3.12e-14 | 72.4 |
| Msa0713300 | AT1G17380.1 | 36.364 | 121 | 69 | 2 | 192 | 304 | 87 | 207 | 5.54e-14 | 71.6 |
| Msa0713300 | AT5G20900.1 | 36.842 | 114 | 59 | 3 | 203 | 306 | 57 | 167 | 9.54e-14 | 69.3 |
| Msa0713300 | AT1G70700.2 | 34.884 | 129 | 74 | 4 | 203 | 326 | 119 | 242 | 1.30e-11 | 64.3 |
Find 79 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTACAAGAGATTCCTATTT+TGG | 0.046444 | 5_1:-5421565 | Msa0713300:CDS |
| CCTACAAGAGATTCCTAATT+TGG | 0.066386 | 5_1:-5416243 | Msa0713300:CDS |
| CCATCTATACCTGTTATTTA+TGG | 0.164541 | 5_1:-5415840 | Msa0713300:intron |
| CCATCTATACCTGTTATTTA+TGG | 0.164541 | 5_1:-5421166 | Msa0713300:intron |
| ATTCATCAATTGACTTATTT+AGG | 0.185988 | 5_1:+5414526 | None:intergenic |
| TATATTTCCGCTCCCATAAC+TGG | 0.245992 | 5_1:-5414205 | None:intergenic |
| GACTTATTTAGGAATGCTTC+TGG | 0.273044 | 5_1:+5414537 | None:intergenic |
| AGCTTCACTTCATCGGTTCT+TGG | 0.292747 | 5_1:-5415696 | Msa0713300:CDS |
| AGCTTCACTTCATCGGTTCT+TGG | 0.292747 | 5_1:-5421025 | Msa0713300:CDS |
| TACCTGGAGTTTCCCAAATT+AGG | 0.318968 | 5_1:+5416230 | None:intergenic |
| CATGTCATGGATTCATCAAT+TGG | 0.320863 | 5_1:+5420488 | None:intergenic |
| TCAACCAGAACAACACTTAA+TGG | 0.328246 | 5_1:+5414355 | None:intergenic |
| CCAAATTAGGAATCTCTTGT+AGG | 0.328797 | 5_1:+5416243 | None:intergenic |
| CCAAAATAGGAATCTCTTGT+AGG | 0.331403 | 5_1:+5421565 | None:intergenic |
| CTACAAGAGATTCCTAATTT+GGG | 0.331956 | 5_1:-5416242 | Msa0713300:CDS |
| TGTACCATTAAGTGTTGTTC+TGG | 0.342549 | 5_1:-5414359 | Msa0713300:three_prime_UTR |
| AATATAAAGCTTTATGTTCA+TGG | 0.346241 | 5_1:+5414222 | None:intergenic |
| ATCCATGACATGGCTCTCTT+TGG | 0.358156 | 5_1:-5420477 | Msa0713300:CDS |
| TACCTGGAGTTTCCCAAAAT+AGG | 0.395618 | 5_1:+5421552 | None:intergenic |
| CCATGAACTGTCCCAGTTAT+GGG | 0.397864 | 5_1:+5414193 | None:intergenic |
| GGAAGTTGTTGAAAATTCAT+AGG | 0.405668 | 5_1:+5421597 | None:intergenic |
| TCTGGATTACTTGTTTGATA+AGG | 0.409991 | 5_1:+5414555 | None:intergenic |
| GGAAAAGTCCATGATGTCTT+TGG | 0.411671 | 5_1:+5415977 | None:intergenic |
| GGAAAAGTCCATGATGTCTT+TGG | 0.411671 | 5_1:+5421285 | None:intergenic |
| ATGTCTTTGGCTTTATCAGC+TGG | 0.417227 | 5_1:+5415990 | None:intergenic |
| AGTGAAGCTTTCCTAGTCAT+TGG | 0.425048 | 5_1:+5415710 | None:intergenic |
| AGTGAAGCTTTCCTAGTCAT+TGG | 0.425048 | 5_1:+5421039 | None:intergenic |
| TGAAGTACTAGTAATTCCTT+TGG | 0.431697 | 5_1:+5421261 | None:intergenic |
| GTAGTCTTGAAGAGAATTGT+TGG | 0.442893 | 5_1:+5415872 | None:intergenic |
| CAAATGACAATCTTCTATGA+TGG | 0.453411 | 5_1:-5416038 | Msa0713300:CDS |
| TGAAGTACTAGTAATTCCTT+TGG | 0.455465 | 5_1:+5415953 | None:intergenic |
| TTCATCGGTTCTTGGAGAAA+AGG | 0.463618 | 5_1:-5415688 | Msa0713300:CDS |
| TTCATCGGTTCTTGGAGAAA+AGG | 0.463618 | 5_1:-5421017 | Msa0713300:CDS |
| ATATAAAGCTTTATGTTCAT+GGG | 0.465808 | 5_1:+5414223 | None:intergenic |
| GGAAGCTGTTGAAAATTCAT+AGG | 0.469618 | 5_1:+5416275 | None:intergenic |
| AGTAAGCATAGTTGTTATTG+TGG | 0.472037 | 5_1:+5421233 | None:intergenic |
| CCATAAATAACAGGTATAGA+TGG | 0.477854 | 5_1:+5415840 | None:intergenic |
| CCATAAATAACAGGTATAGA+TGG | 0.477854 | 5_1:+5421166 | None:intergenic |
| AGTACTAGTAATTCCTTTGG+TGG | 0.499055 | 5_1:+5415956 | None:intergenic |
| AGTACTAGTAATTCCTTTGG+TGG | 0.499055 | 5_1:+5421264 | None:intergenic |
| ATCCATGTCATGGCTATCCT+TGG | 0.509457 | 5_1:-5414505 | Msa0713300:CDS |
| AGCAAGCATAGTTGTTATTG+TGG | 0.514503 | 5_1:+5415919 | None:intergenic |
| GATTTATGTTGTGGTGATTG+TGG | 0.515021 | 5_1:+5420452 | None:intergenic |
| TTCCTAATTTGGGAAACTCC+AGG | 0.526778 | 5_1:-5416232 | Msa0713300:intron |
| CTAGGAAAGCTTCACTTCAT+CGG | 0.529148 | 5_1:-5415703 | Msa0713300:CDS |
| CTAGGAAAGCTTCACTTCAT+CGG | 0.529148 | 5_1:-5421032 | Msa0713300:CDS |
| CAGGTATAGATGGTACTTGA+GGG | 0.533329 | 5_1:+5421176 | None:intergenic |
| AAATGACAATCTTCTATGAT+GGG | 0.538308 | 5_1:-5416037 | Msa0713300:CDS |
| CTACATTCAGATTTGTGTTG+CGG | 0.544643 | 5_1:+5414471 | None:intergenic |
| AATGAAGGCTAATATTAAGA+AGG | 0.546955 | 5_1:-5421386 | Msa0713300:CDS |
| AATGAAGGCTAATATTAAGA+AGG | 0.556826 | 5_1:-5416078 | Msa0713300:CDS |
| CTACACTCAGATTTATGTTG+TGG | 0.562374 | 5_1:+5420443 | None:intergenic |
| ATCTCTTGTAGGAAGAGATG+AGG | 0.564072 | 5_1:+5416254 | None:intergenic |
| ATCTCTTGTAGGAAGAGATG+AGG | 0.564072 | 5_1:+5421576 | None:intergenic |
| AACTGTCCCAGTTATGGGAG+CGG | 0.565084 | 5_1:+5414198 | None:intergenic |
| GGCTAATATTAAGAAGGAAG+AGG | 0.566182 | 5_1:-5416072 | Msa0713300:CDS |
| TCTTGGAGAAAAGGAAGGAT+AGG | 0.567398 | 5_1:-5415679 | Msa0713300:intron |
| TCTTGGAGAAAAGGAAGGAT+AGG | 0.567398 | 5_1:-5421008 | Msa0713300:intron |
| ACAGGTATAGATGGTACTTG+AGG | 0.569787 | 5_1:+5421175 | None:intergenic |
| TATAAAGCTTTATGTTCATG+GGG | 0.577563 | 5_1:+5414224 | None:intergenic |
| TGCCAAAGAGAGCCATGTCA+TGG | 0.583954 | 5_1:+5420475 | None:intergenic |
| TGATAAAGCCAAAGACATCA+TGG | 0.585378 | 5_1:-5415985 | Msa0713300:CDS |
| TCGGTTCTTGGAGAAAAGGA+AGG | 0.585705 | 5_1:-5415684 | Msa0713300:CDS |
| TCGGTTCTTGGAGAAAAGGA+AGG | 0.585705 | 5_1:-5421013 | Msa0713300:CDS |
| GTTTCTGCAGAATTGCTGCA+AGG | 0.606526 | 5_1:-5414581 | Msa0713300:intron |
| ATTCAGATTTACCAATGACT+AGG | 0.608086 | 5_1:-5415721 | Msa0713300:intron |
| ATTCAGATTTACCAATGACT+AGG | 0.608086 | 5_1:-5421050 | Msa0713300:intron |
| TTTCTGCAGAATTGCTGCAA+GGG | 0.611240 | 5_1:-5414580 | Msa0713300:intron |
| TTAAAGTAACACATGGGTGG+AGG | 0.612419 | 5_1:+5420415 | None:intergenic |
| CAATTGATGAATCCATGTCA+TGG | 0.612586 | 5_1:-5414515 | Msa0713300:CDS |
| TGCCAAGGATAGCCATGACA+TGG | 0.617530 | 5_1:+5414503 | None:intergenic |
| GTACATATTAGTTAATGTTG+AGG | 0.621240 | 5_1:-5414394 | Msa0713300:three_prime_UTR |
| GATTTGTGTTGCGGTGAATG+TGG | 0.622415 | 5_1:+5414480 | None:intergenic |
| CAATTGATGAATCCATGACA+TGG | 0.622850 | 5_1:-5420487 | Msa0713300:CDS |
| ATTGTTATAGAAGATGTCCT+CGG | 0.627775 | 5_1:-5414273 | Msa0713300:three_prime_UTR |
| TTGCGGTGAATGTGGTGCCA+AGG | 0.648709 | 5_1:+5414488 | None:intergenic |
| CAGTTAAAGTAACACATGGG+TGG | 0.664883 | 5_1:+5420412 | None:intergenic |
| ATAAAGCTTTATGTTCATGG+GGG | 0.713830 | 5_1:+5414225 | None:intergenic |
| TCGACATAAGAATGATACCG+AGG | 0.723742 | 5_1:+5414256 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATTAATATATTATAAT+AGG | + | chr5_1:5417878-5417897 | None:intergenic | 0.0% |
| !! | AATAAAATTTAATGTAAGTA+TGG | - | chr5_1:5414998-5415017 | Msa0713300:intron | 10.0% |
| !! | AATTAATAAAAGGTTAAAAT+TGG | - | chr5_1:5416913-5416932 | Msa0713300:intron | 10.0% |
| !! | AAAGCAAAATTAAAAATAAA+AGG | + | chr5_1:5417286-5417305 | None:intergenic | 10.0% |
| !! | TTCAAATATTTACTTTATAT+GGG | - | chr5_1:5417938-5417957 | Msa0713300:intron | 10.0% |
| !!! | ACCATATTAATATTTTATTA+GGG | + | chr5_1:5418142-5418161 | None:intergenic | 10.0% |
| !! | TTAAAACTCATAAATATATA+TGG | - | chr5_1:5418366-5418385 | Msa0713300:intron | 10.0% |
| !! | ACTAAACAATAAAAAAAAAT+TGG | - | chr5_1:5418645-5418664 | Msa0713300:intron | 10.0% |
| !! | AAAAAAAAAAAAATCTTAGT+TGG | + | chr5_1:5419467-5419486 | None:intergenic | 10.0% |
| !!! | ACTAAGATTTTTTTTTTTTT+AGG | - | chr5_1:5419467-5419486 | Msa0713300:intron | 10.0% |
| !!! | CTAAGATTTTTTTTTTTTTA+GGG | - | chr5_1:5419468-5419487 | Msa0713300:intron | 10.0% |
| !!! | TTATTTATGGTAATTTTTTT+TGG | - | chr5_1:5420063-5420082 | Msa0713300:intron | 10.0% |
| !!! | TAGTTTTAAAAGTAATATTT+TGG | + | chr5_1:5420864-5420883 | None:intergenic | 10.0% |
| !! | AAAAAATTACCATAAATAAC+AGG | + | chr5_1:5414736-5414755 | None:intergenic | 15.0% |
| !!! | TGTTATTTATGGTAATTTTT+TGG | - | chr5_1:5414735-5414754 | Msa0713300:intron | 15.0% |
| !!! | TTTTTAGTTGTCATAATATT+CGG | + | chr5_1:5416009-5416028 | None:intergenic | 15.0% |
| !!! | CTTTTGATTAAAGTTTATTT+TGG | + | chr5_1:5416141-5416160 | None:intergenic | 15.0% |
| !!! | TTTTATGCATTTTAGTTTAA+CGG | - | chr5_1:5416235-5416254 | Msa0713300:CDS | 15.0% |
| !! | AGAAATGTTAAATATGATTA+TGG | - | chr5_1:5417243-5417262 | Msa0713300:intron | 15.0% |
| !! | AAAAGGTTAAAATATTAGTA+GGG | + | chr5_1:5417269-5417288 | None:intergenic | 15.0% |
| !! | TAAAAGGTTAAAATATTAGT+AGG | + | chr5_1:5417270-5417289 | None:intergenic | 15.0% |
| !! | AATATTGCATATTATATGTA+GGG | + | chr5_1:5417540-5417559 | None:intergenic | 15.0% |
| !! | CTTCAAATATTTACTTTATA+TGG | - | chr5_1:5417937-5417956 | Msa0713300:intron | 15.0% |
| !! | TCCTAAAAAGAATAAAATTA+GGG | + | chr5_1:5418103-5418122 | None:intergenic | 15.0% |
| !! | ATCCTAAAAAGAATAAAATT+AGG | + | chr5_1:5418104-5418123 | None:intergenic | 15.0% |
| !! | ACCCTAATAAAATATTAATA+TGG | - | chr5_1:5418138-5418157 | Msa0713300:intron | 15.0% |
| !!! | GACCATATTAATATTTTATT+AGG | + | chr5_1:5418143-5418162 | None:intergenic | 15.0% |
| !!! | TCTCATTTATTCTTTTTTAA+AGG | + | chr5_1:5418698-5418717 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr5_1:5419263-5419282 | Msa0713300:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr5_1:5419264-5419283 | Msa0713300:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5_1:5419328-5419347 | Msa0713300:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5_1:5419329-5419348 | Msa0713300:intron | 15.0% |
| !!! | GACACTTTTTTTTAAAAAAT+GGG | - | chr5_1:5419398-5419417 | Msa0713300:intron | 15.0% |
| !! | AAAAAATTACCATAAATAAC+AGG | + | chr5_1:5414736-5414755 | None:intergenic | 15.0% |
| !!! | TGATAGATAAATCAATTTTA+AGG | - | chr5_1:5420469-5420488 | Msa0713300:CDS | 15.0% |
| !!! | TTTTTGTTTATAATAGTGAT+TGG | - | chr5_1:5420594-5420613 | Msa0713300:intron | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr5_1:5420888-5420907 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr5_1:5420887-5420906 | Msa0713300:intron | 15.0% |
| !!! | TACACTATTATAATCAATTT+TGG | - | chr5_1:5421103-5421122 | Msa0713300:intron | 15.0% |
| !!! | AAATGACAATCTTTTATGAT+GGG | - | chr5_1:5414545-5414564 | Msa0713300:CDS | 20.0% |
| !!! | TGTTAATAGATTTCACTTTT+TGG | - | chr5_1:5414947-5414966 | Msa0713300:intron | 20.0% |
| !!! | GTTAATAGATTTCACTTTTT+GGG | - | chr5_1:5414948-5414967 | Msa0713300:intron | 20.0% |
| !!! | TTAATAGATTTCACTTTTTG+GGG | - | chr5_1:5414949-5414968 | Msa0713300:intron | 20.0% |
| !! | ATTACTAATACTATGATGTT+TGG | - | chr5_1:5415288-5415307 | Msa0713300:intron | 20.0% |
| !! | TTACTAATACTATGATGTTT+GGG | - | chr5_1:5415289-5415308 | Msa0713300:intron | 20.0% |
| !! | GTTAGCTGATAAATATAAAA+TGG | - | chr5_1:5416540-5416559 | Msa0713300:intron | 20.0% |
| !! | ATATTGCATATTATATGTAG+GGG | + | chr5_1:5417539-5417558 | None:intergenic | 20.0% |
| !! | GAATATTGCATATTATATGT+AGG | + | chr5_1:5417541-5417560 | None:intergenic | 20.0% |
| !!! | TTTGTTTACATTTTTAGACA+TGG | - | chr5_1:5417903-5417922 | Msa0713300:intron | 20.0% |
| !!! | TTGTTTACATTTTTAGACAT+GGG | - | chr5_1:5417904-5417923 | Msa0713300:intron | 20.0% |
| !! | TAAAATTAGGGTTAACTTAA+GGG | + | chr5_1:5418091-5418110 | None:intergenic | 20.0% |
| !! | ATAAAATTAGGGTTAACTTA+AGG | + | chr5_1:5418092-5418111 | None:intergenic | 20.0% |
| !!! | ACCCTAATTTTATTCTTTTT+AGG | - | chr5_1:5418099-5418118 | Msa0713300:intron | 20.0% |
| !!! | TTATGAGTTTTAAGATTCAA+TGG | + | chr5_1:5418359-5418378 | None:intergenic | 20.0% |
| !!! | TTTGTGGATTTAAAATTTAG+TGG | + | chr5_1:5418442-5418461 | None:intergenic | 20.0% |
| !!! | ATTTTAAATCCACAAATCAA+TGG | - | chr5_1:5418446-5418465 | Msa0713300:intron | 20.0% |
| !!! | AGAAATCTGAAATTATTGTT+CGG | - | chr5_1:5418715-5418734 | Msa0713300:intron | 20.0% |
| !!! | AATTGAATAATGACTTGTTT+TGG | + | chr5_1:5418886-5418905 | None:intergenic | 20.0% |
| !!! | TTATACACTTTTCTTAATCT+AGG | + | chr5_1:5419259-5419278 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr5_1:5419265-5419284 | Msa0713300:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr5_1:5419288-5419307 | Msa0713300:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr5_1:5419361-5419380 | Msa0713300:intron | 20.0% |
| !!! | GGACACTTTTTTTTAAAAAA+TGG | - | chr5_1:5419397-5419416 | Msa0713300:intron | 20.0% |
| !! | TATTGCTAAAAATATGTTGA+TGG | + | chr5_1:5419719-5419738 | None:intergenic | 20.0% |
| !!! | AGTGTAATTTTGTGTATTTT+AGG | - | chr5_1:5420438-5420457 | Msa0713300:CDS | 20.0% |
| !!! | AATTTTAAGGAACCAATTTT+AGG | - | chr5_1:5420482-5420501 | Msa0713300:CDS | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr5_1:5420801-5420820 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr5_1:5420878-5420897 | Msa0713300:intron | 20.0% |
| !! | AATGATTAAGAGAAAAAGAA+TGG | + | chr5_1:5420921-5420940 | None:intergenic | 20.0% |
| !! | GATAACCAATTTACTAAAAT+TGG | + | chr5_1:5421199-5421218 | None:intergenic | 20.0% |
| !!! | ATTCATCAATTGACTTATTT+AGG | + | chr5_1:5421367-5421386 | None:intergenic | 20.0% |
| !!! | ATATAAAGCTTTATGTTCAT+GGG | + | chr5_1:5421670-5421689 | None:intergenic | 20.0% |
| !!! | AATATAAAGCTTTATGTTCA+TGG | + | chr5_1:5421671-5421690 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTGTGCTTTTTT+TGG | + | chr5_1:5414249-5414268 | None:intergenic | 25.0% |
| ! | CATACTAGTAGTATATAACA+TGG | - | chr5_1:5414436-5414455 | Msa0713300:exon | 25.0% |
| !!! | GTTTTATTACAGTGTAATGA+AGG | - | chr5_1:5414489-5414508 | Msa0713300:CDS | 25.0% |
| ! | AATGAAGGCTAATATTAAGA+AGG | - | chr5_1:5414504-5414523 | Msa0713300:CDS | 25.0% |
| !! | CAAATGACAATCTTTTATGA+TGG | - | chr5_1:5414544-5414563 | Msa0713300:CDS | 25.0% |
| ! | TTGGATATATTAAGTTTGAG+AGG | - | chr5_1:5414754-5414773 | Msa0713300:intron | 25.0% |
| ! | TGGATATATTAAGTTTGAGA+GGG | - | chr5_1:5414755-5414774 | Msa0713300:intron | 25.0% |
| ! | AAACATGTCAAAATCAATCT+TGG | + | chr5_1:5415041-5415060 | None:intergenic | 25.0% |
| !! | AATGTACAGTGATTTTTGTT+TGG | + | chr5_1:5415183-5415202 | None:intergenic | 25.0% |
| ! | TACATTCAACTCAATCTTAA+AGG | - | chr5_1:5415197-5415216 | Msa0713300:intron | 25.0% |
| ! | AACAAACATATCAGTCAATA+TGG | + | chr5_1:5415317-5415336 | None:intergenic | 25.0% |
| !! | ATTGGTTTATTAATGCTTCT+TGG | + | chr5_1:5415387-5415406 | None:intergenic | 25.0% |
| ! | AAACAGTTAAAGTAACACAT+GGG | + | chr5_1:5415484-5415503 | None:intergenic | 25.0% |
| ! | AAAACAGTTAAAGTAACACA+TGG | + | chr5_1:5415485-5415504 | None:intergenic | 25.0% |
| !!! | TTTAACTGTTTTTGTTAGCA+CGG | - | chr5_1:5415493-5415512 | Msa0713300:intron | 25.0% |
| !! | ATACATACTTTTGTGAGAAT+AGG | + | chr5_1:5415581-5415600 | None:intergenic | 25.0% |
| ! | ATACATATTTGTGATTGTTG+TGG | - | chr5_1:5415599-5415618 | Msa0713300:intron | 25.0% |
| !!! | ACAAGTAGTACACTTTTTTT+AGG | + | chr5_1:5415671-5415690 | None:intergenic | 25.0% |
| ! | TTACCTCGTATTATTGTTAT+AGG | - | chr5_1:5415691-5415710 | Msa0713300:CDS | 25.0% |
| ! | TTTCCTATAACAATAATACG+AGG | + | chr5_1:5415697-5415716 | None:intergenic | 25.0% |
| ! | TAATAACGAAAATGACATTG+AGG | + | chr5_1:5415723-5415742 | None:intergenic | 25.0% |
| ! | TTGGTAAAATTGAATTGAAC+TGG | - | chr5_1:5415863-5415882 | Msa0713300:CDS | 25.0% |
| ! | CTTTACAGAAAATTAAACTG+CGG | - | chr5_1:5415932-5415951 | Msa0713300:CDS | 25.0% |
| !! | TTTCTTTTAACCATCTAGTT+TGG | + | chr5_1:5415970-5415989 | None:intergenic | 25.0% |
| ! | TAATGATTCAACTCAATGTA+TGG | + | chr5_1:5416116-5416135 | None:intergenic | 25.0% |
| !! | AAAAAATTGATTTCCATTGC+CGG | + | chr5_1:5416362-5416381 | None:intergenic | 25.0% |
| !! | ATTTTCATTCAAAACAACAG+AGG | + | chr5_1:5417115-5417134 | None:intergenic | 25.0% |
| ! | ATAAATTACTACCTCAAGTA+GGG | + | chr5_1:5417831-5417850 | None:intergenic | 25.0% |
| ! | AATAAATTACTACCTCAAGT+AGG | + | chr5_1:5417832-5417851 | None:intergenic | 25.0% |
| !!! | ATTTTATTAGGGTTGATCAT+CGG | + | chr5_1:5418131-5418150 | None:intergenic | 25.0% |
| ! | TTGAGAATTTAGTGTTAACT+TGG | + | chr5_1:5418263-5418282 | None:intergenic | 25.0% |
| !!! | TAGTTTTAAGTCGTAAACTT+GGG | + | chr5_1:5418295-5418314 | None:intergenic | 25.0% |
| !!! | AAGCAACAATTCTAGAATAT+AGG | - | chr5_1:5418597-5418616 | Msa0713300:intron | 25.0% |
| ! | TTCATCTCAAAATAACTCTT+GGG | + | chr5_1:5418776-5418795 | None:intergenic | 25.0% |
| ! | TTTCATCTCAAAATAACTCT+TGG | + | chr5_1:5418777-5418796 | None:intergenic | 25.0% |
| !!! | AGAGTTATTTTGAGATGAAA+AGG | - | chr5_1:5418777-5418796 | Msa0713300:intron | 25.0% |
| !! | ATAAATAAAACGTGCTGATA+TGG | - | chr5_1:5418848-5418867 | Msa0713300:intron | 25.0% |
| !! | TAAATAAAACGTGCTGATAT+GGG | - | chr5_1:5418849-5418868 | Msa0713300:intron | 25.0% |
| !!! | TAATGACTTGTTTTGGTTTT+TGG | + | chr5_1:5418879-5418898 | None:intergenic | 25.0% |
| !!! | TACCTAACTGTTTTTCATTT+GGG | + | chr5_1:5419092-5419111 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5_1:5419287-5419306 | Msa0713300:intron | 25.0% |
| !! | TTGAAATGGATCAGTTATTT+TGG | - | chr5_1:5419375-5419394 | Msa0713300:intron | 25.0% |
| !!! | TGAAATGGATCAGTTATTTT+GGG | - | chr5_1:5419376-5419395 | Msa0713300:intron | 25.0% |
| ! | ATGGAATAAATAGTTGAAGA+AGG | + | chr5_1:5419562-5419581 | None:intergenic | 25.0% |
| ! | AAAAAAAAAGAACATGTACC+TGG | + | chr5_1:5419679-5419698 | None:intergenic | 25.0% |
| ! | AATGAAGGCTAATATTAAGA+AGG | - | chr5_1:5414504-5414523 | Msa0713300:CDS | 25.0% |
| ! | AAATGACAATCTTCTATGAT+GGG | - | chr5_1:5419853-5419872 | Msa0713300:intron | 25.0% |
| ! | TTGGATATATTATGTTTGAG+AGG | - | chr5_1:5420082-5420101 | Msa0713300:intron | 25.0% |
| ! | TGGATATATTATGTTTGAGA+GGG | - | chr5_1:5420083-5420102 | Msa0713300:intron | 25.0% |
| ! | AACATACTACTTAACAATTG+AGG | + | chr5_1:5420307-5420326 | None:intergenic | 25.0% |
| ! | AAGTAGTATGTTTGATTCTA+CGG | - | chr5_1:5420315-5420334 | Msa0713300:intron | 25.0% |
| ! | GTTACAAAAATTGATTGAAC+TGG | - | chr5_1:5420337-5420356 | Msa0713300:intron | 25.0% |
| ! | TTGCGTTTATATAATAGTGA+CGG | + | chr5_1:5420516-5420535 | None:intergenic | 25.0% |
| !! | TTTTCTCTACATTGGATTTT+TGG | + | chr5_1:5420700-5420719 | None:intergenic | 25.0% |
| !!! | AGTAGTTTTTTTCTCTACAT+TGG | + | chr5_1:5420708-5420727 | None:intergenic | 25.0% |
| ! | TTATAGTTTCAATCAGTTTC+TGG | - | chr5_1:5421005-5421024 | Msa0713300:intron | 25.0% |
| !!! | ATATAGTTTTGAGAGGATAA+CGG | + | chr5_1:5421221-5421240 | None:intergenic | 25.0% |
| ! | TCCTCTCAAAACTATATATA+TGG | - | chr5_1:5421224-5421243 | Msa0713300:CDS | 25.0% |
| ! | AACATCATACTAGTAGAAAA+GGG | + | chr5_1:5421254-5421273 | None:intergenic | 25.0% |
| ! | AAACATCATACTAGTAGAAA+AGG | + | chr5_1:5421255-5421274 | None:intergenic | 25.0% |
| !! | TTTTCTACTAGTATGATGTT+TGG | - | chr5_1:5421254-5421273 | Msa0713300:CDS | 25.0% |
| !!! | ACACATATTTTTGTGAGTAT+AGG | + | chr5_1:5421478-5421497 | None:intergenic | 25.0% |
| ! | GTACATATTAGTTAATGTTG+AGG | - | chr5_1:5421496-5421515 | Msa0713300:intron | 25.0% |
| !! | TATAAAGCTTTATGTTCATG+GGG | + | chr5_1:5421669-5421688 | None:intergenic | 25.0% |
| !!! | GTTTTGTGCTTTTTTTGGTA+TGG | + | chr5_1:5414244-5414263 | None:intergenic | 30.0% |
| GGAAGTTGTTGAAAATTCAT+AGG | + | chr5_1:5414296-5414315 | None:intergenic | 30.0% | |
| ! | CTACAAGAGATTCCTATTTT+GGG | - | chr5_1:5414326-5414345 | Msa0713300:three_prime_UTR | 30.0% |
| AAAAAGAACATGTATGTACC+TGG | + | chr5_1:5414357-5414376 | None:intergenic | 30.0% | |
| ! | TGAAGTACTAGTAATTCCTT+TGG | + | chr5_1:5414632-5414651 | None:intergenic | 30.0% |
| ! | AGTAAGCATAGTTGTTATTG+TGG | + | chr5_1:5414660-5414679 | None:intergenic | 30.0% |
| CCATAAATAACAGGTATAGA+TGG | + | chr5_1:5414727-5414746 | None:intergenic | 30.0% | |
| ! | CCATCTATACCTGTTATTTA+TGG | - | chr5_1:5414724-5414743 | Msa0713300:intron | 30.0% |
| ATTCAGATTTACCAATGACT+AGG | - | chr5_1:5414840-5414859 | Msa0713300:intron | 30.0% | |
| ATATTTGATTGAGAGAGATC+TGG | + | chr5_1:5414916-5414935 | None:intergenic | 30.0% | |
| AATCTTGGATTATCCAAAAG+TGG | + | chr5_1:5415026-5415045 | None:intergenic | 30.0% | |
| CAAAATCAATTCAACTGATG+CGG | + | chr5_1:5415068-5415087 | None:intergenic | 30.0% | |
| TCAAGTAGAATCAATTCTGT+AGG | + | chr5_1:5415091-5415110 | None:intergenic | 30.0% | |
| CAGAACTACACTCTTTATAA+TGG | + | chr5_1:5415642-5415661 | None:intergenic | 30.0% | |
| ! | ATATGAAGCTTTATGTTGTG+TGG | + | chr5_1:5415752-5415771 | None:intergenic | 30.0% |
| ATATTTCCACTCTCATAACT+AGG | - | chr5_1:5415768-5415787 | Msa0713300:intron | 30.0% | |
| ATTGAATTGAACTGGTGTAA+AGG | - | chr5_1:5415871-5415890 | Msa0713300:CDS | 30.0% | |
| !! | CGCAGTTTAATTTTCTGTAA+AGG | + | chr5_1:5415934-5415953 | None:intergenic | 30.0% |
| AGGGATAATCGAATTTGAAA+CGG | - | chr5_1:5416079-5416098 | Msa0713300:CDS | 30.0% | |
| GTACACTATACGTCATAATT+CGG | + | chr5_1:5416166-5416185 | None:intergenic | 30.0% | |
| ! | AAAAATTGATTTCCATTGCC+GGG | + | chr5_1:5416361-5416380 | None:intergenic | 30.0% |
| !! | ATTGTTTTGTTGAACTGTGA+AGG | - | chr5_1:5416407-5416426 | Msa0713300:intron | 30.0% |
| !! | GAAAGAAATTTTGGAGAAGA+GGG | - | chr5_1:5416436-5416455 | Msa0713300:intron | 30.0% |
| !! | AAAGAAATTTTGGAGAAGAG+GGG | - | chr5_1:5416437-5416456 | Msa0713300:intron | 30.0% |
| ! | TAAGCTAGTTTATAACTTGC+TGG | + | chr5_1:5417073-5417092 | None:intergenic | 30.0% |
| !! | TTCATTTTTAGGAAAGCATG+AGG | - | chr5_1:5417184-5417203 | Msa0713300:intron | 30.0% |
| ACAATTTAATTGTGGAGAAG+TGG | - | chr5_1:5417490-5417509 | Msa0713300:intron | 30.0% | |
| ATTCAAAGTCCATTATCTGT+AGG | - | chr5_1:5417739-5417758 | Msa0713300:intron | 30.0% | |
| !! | ATAGATTAGCCTACAGATAA+TGG | + | chr5_1:5417751-5417770 | None:intergenic | 30.0% |
| ! | AGAATTTAGTGTTAACTTGG+TGG | + | chr5_1:5418260-5418279 | None:intergenic | 30.0% |
| !!! | CTAGTTTTAAGTCGTAAACT+TGG | + | chr5_1:5418296-5418315 | None:intergenic | 30.0% |
| ! | TCAATGGATATGATTTTGCA+AGG | + | chr5_1:5418343-5418362 | None:intergenic | 30.0% |
| TCGAGATACATCTAATAACT+CGG | + | chr5_1:5418626-5418645 | None:intergenic | 30.0% | |
| TCATCTCAAAATAACTCTTG+GGG | + | chr5_1:5418775-5418794 | None:intergenic | 30.0% | |
| ! | TTTGAGATGAAAAGGAAAGA+AGG | - | chr5_1:5418785-5418804 | Msa0713300:intron | 30.0% |
| TTGAGATGAAAAGGAAAGAA+GGG | - | chr5_1:5418786-5418805 | Msa0713300:intron | 30.0% | |
| TTTATTTGCTTAGACCACTT+GGG | + | chr5_1:5418828-5418847 | None:intergenic | 30.0% | |
| !! | TTTTATTTGCTTAGACCACT+TGG | + | chr5_1:5418829-5418848 | None:intergenic | 30.0% |
| !! | GTACCTAACTGTTTTTCATT+TGG | + | chr5_1:5419093-5419112 | None:intergenic | 30.0% |
| CAAAGTATGTCAATTATACC+GGG | + | chr5_1:5419228-5419247 | None:intergenic | 30.0% | |
| CCAAAGTATGTCAATTATAC+CGG | + | chr5_1:5419229-5419248 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5_1:5419272-5419291 | Msa0713300:intron | 30.0% | |
| AAAAAATGGGTCAGTTATTC+CGG | - | chr5_1:5419411-5419430 | Msa0713300:intron | 30.0% | |
| CTACAAGAGATTCCTAATTT+GGG | - | chr5_1:5419648-5419667 | Msa0713300:intron | 30.0% | |
| ATTCATGCTAGTATATAGCA+TGG | - | chr5_1:5419744-5419763 | Msa0713300:intron | 30.0% | |
| !! | GTTTTATTACAGTGCAATGA+AGG | - | chr5_1:5419797-5419816 | Msa0713300:intron | 30.0% |
| CAAATGACAATCTTCTATGA+TGG | - | chr5_1:5419852-5419871 | Msa0713300:intron | 30.0% | |
| ! | TGAAGTACTAGTAATTCCTT+TGG | + | chr5_1:5414632-5414651 | None:intergenic | 30.0% |
| CCATAAATAACAGGTATAGA+TGG | + | chr5_1:5414727-5414746 | None:intergenic | 30.0% | |
| ! | CCATCTATACCTGTTATTTA+TGG | - | chr5_1:5414724-5414743 | Msa0713300:intron | 30.0% |
| ATTCAGATTTACCAATGACT+AGG | - | chr5_1:5414840-5414859 | Msa0713300:intron | 30.0% | |
| ATATTTGATTGAGAGAGATC+TGG | + | chr5_1:5414916-5414935 | None:intergenic | 30.0% | |
| !!! | GTCAATAGACTTCACTTTTT+AGG | - | chr5_1:5420277-5420296 | Msa0713300:intron | 30.0% |
| ! | GTGATTTTGCTAAAAGTGAA+TGG | - | chr5_1:5420370-5420389 | Msa0713300:intron | 30.0% |
| ! | TTTATATAATAGTGACGGGA+GGG | + | chr5_1:5420511-5420530 | None:intergenic | 30.0% |
| TGCGTTTATATAATAGTGAC+GGG | + | chr5_1:5420515-5420534 | None:intergenic | 30.0% | |
| ATCCAAATTCTCTACCTTTA+AGG | + | chr5_1:5420677-5420696 | None:intergenic | 30.0% | |
| ! | TGTGTAGAGTATTAATTGGA+GGG | + | chr5_1:5420835-5420854 | None:intergenic | 30.0% |
| ! | GTAGTGTGTAGAGTATTAAT+TGG | + | chr5_1:5420839-5420858 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr5_1:5420969-5420988 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr5_1:5420970-5420989 | Msa0713300:intron | 30.0% |
| !! | AGGAGCCAATTTTAGTAAAT+TGG | - | chr5_1:5421191-5421210 | Msa0713300:CDS | 30.0% |
| !!! | GCCATATATATAGTTTTGAG+AGG | + | chr5_1:5421228-5421247 | None:intergenic | 30.0% |
| GACAAACTTATCAGTCAATA+TGG | + | chr5_1:5421286-5421305 | None:intergenic | 30.0% | |
| TCTGGATTACTTGTTTGATA+AGG | + | chr5_1:5421338-5421357 | None:intergenic | 30.0% | |
| !! | AACAAGTACTACTCGTTTTT+GGG | + | chr5_1:5421562-5421581 | None:intergenic | 30.0% |
| ! | TAACAAGTACTACTCGTTTT+TGG | + | chr5_1:5421563-5421582 | None:intergenic | 30.0% |
| ATTGTTATAGAAGATGTCCT+CGG | - | chr5_1:5421617-5421636 | Msa0713300:CDS | 30.0% | |
| ! | ATAAAGCTTTATGTTCATGG+GGG | + | chr5_1:5421668-5421687 | None:intergenic | 30.0% |
| CCAAAATAGGAATCTCTTGT+AGG | + | chr5_1:5414328-5414347 | None:intergenic | 35.0% | |
| ! | CCTACAAGAGATTCCTATTT+TGG | - | chr5_1:5414325-5414344 | Msa0713300:three_prime_UTR | 35.0% |
| TGAAAAAGCCAAAGACATCA+TGG | - | chr5_1:5414597-5414616 | Msa0713300:intron | 35.0% | |
| AGTACTAGTAATTCCTTTGG+TGG | + | chr5_1:5414629-5414648 | None:intergenic | 35.0% | |
| ! | TGTAAGTATGGTTCCACTTT+TGG | - | chr5_1:5415010-5415029 | Msa0713300:intron | 35.0% |
| CTTGGATTGCTTGTTTGATA+TGG | + | chr5_1:5415369-5415388 | None:intergenic | 35.0% | |
| CATGTCATGGATTCATCAAT+TGG | + | chr5_1:5415405-5415424 | None:intergenic | 35.0% | |
| CAATTGATGAATCCATGACA+TGG | - | chr5_1:5415403-5415422 | Msa0713300:intron | 35.0% | |
| GATTTATGTTGTGGTGATTG+TGG | + | chr5_1:5415441-5415460 | None:intergenic | 35.0% | |
| CTACACTCAGATTTATGTTG+TGG | + | chr5_1:5415450-5415469 | None:intergenic | 35.0% | |
| CTCAGTCCTACAAAAATAGA+GGG | + | chr5_1:5415557-5415576 | None:intergenic | 35.0% | |
| ACTCAGTCCTACAAAAATAG+AGG | + | chr5_1:5415558-5415577 | None:intergenic | 35.0% | |
| TCATAACTAGGATGGTTCAT+GGG | - | chr5_1:5415780-5415799 | Msa0713300:intron | 35.0% | |
| GAAAATCGAATCGAATCGAA+AGG | - | chr5_1:5415816-5415835 | Msa0713300:intron | 35.0% | |
| CAAACTGTTTCAATTCGCTT+CGG | + | chr5_1:5415846-5415865 | None:intergenic | 35.0% | |
| ! | GATTATCCCTCTGATAGTTT+TGG | + | chr5_1:5416069-5416088 | None:intergenic | 35.0% |
| ! | TTTTGTTGAACTGTGAAGGT+GGG | - | chr5_1:5416411-5416430 | Msa0713300:intron | 35.0% |
| !! | GGAAAGAAATTTTGGAGAAG+AGG | - | chr5_1:5416435-5416454 | Msa0713300:intron | 35.0% |
| TAGCACTAACCTAACTTTCT+TGG | - | chr5_1:5416461-5416480 | Msa0713300:intron | 35.0% | |
| CTAAACACACCAAGAAAGTT+AGG | + | chr5_1:5416473-5416492 | None:intergenic | 35.0% | |
| ATCATGTTAGCATCATGGTA+TGG | + | chr5_1:5416840-5416859 | None:intergenic | 35.0% | |
| TTTGCATCATGTTAGCATCA+TGG | + | chr5_1:5416845-5416864 | None:intergenic | 35.0% | |
| TTTGTAGAATGAGTCGTGTT+TGG | + | chr5_1:5417031-5417050 | None:intergenic | 35.0% | |
| AAAACCTCAAGCATCTTTGT+GGG | + | chr5_1:5417151-5417170 | None:intergenic | 35.0% | |
| AAAAACCTCAAGCATCTTTG+TGG | + | chr5_1:5417152-5417171 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTCAAGTAGCCTAG+TGG | - | chr5_1:5417456-5417475 | Msa0713300:intron | 35.0% |
| GAGCTCACACAATTTAATTG+TGG | - | chr5_1:5417482-5417501 | Msa0713300:intron | 35.0% | |
| TTATATGGGAGCTTAATCCA+CGG | - | chr5_1:5417952-5417971 | Msa0713300:intron | 35.0% | |
| !! | CATTTGCAACCATTGATTTG+TGG | + | chr5_1:5418458-5418477 | None:intergenic | 35.0% |
| TTGCAAATGAACTTCTGCAT+GGG | - | chr5_1:5418469-5418488 | Msa0713300:intron | 35.0% | |
| ! | AAGAAGGAAGATGGCTTTTA+GGG | + | chr5_1:5418519-5418538 | None:intergenic | 35.0% |
| ! | TAAGAAGGAAGATGGCTTTT+AGG | + | chr5_1:5418520-5418539 | None:intergenic | 35.0% |
| TGCAACCACTAAAATGGATA+TGG | - | chr5_1:5418922-5418941 | Msa0713300:intron | 35.0% | |
| GCAACCACTAAAATGGATAT+GGG | - | chr5_1:5418923-5418942 | Msa0713300:intron | 35.0% | |
| !! | TTGTTTGAGACAGAAGTGTT+GGG | + | chr5_1:5418958-5418977 | None:intergenic | 35.0% |
| ! | TTTGTTTGAGACAGAAGTGT+TGG | + | chr5_1:5418959-5418978 | None:intergenic | 35.0% |
| TCTTAAGTAGTACACCTACA+AGG | - | chr5_1:5419049-5419068 | Msa0713300:intron | 35.0% | |
| GACCCAAATGAAAAACAGTT+AGG | - | chr5_1:5419087-5419106 | Msa0713300:intron | 35.0% | |
| CCGGTATAATTGACATACTT+TGG | - | chr5_1:5419226-5419245 | Msa0713300:intron | 35.0% | |
| AAAAATGGGTCAGTTATTCC+GGG | - | chr5_1:5419412-5419431 | Msa0713300:intron | 35.0% | |
| ! | AGCTTTTTATATCTCGTAGG+TGG | + | chr5_1:5419515-5419534 | None:intergenic | 35.0% |
| ! | GGAAGCTTTTTATATCTCGT+AGG | + | chr5_1:5419518-5419537 | None:intergenic | 35.0% |
| !!! | GCTTCATGCTTTTTTTGGTA+TGG | + | chr5_1:5419581-5419600 | None:intergenic | 35.0% |
| !!! | GTGATGCTTCATGCTTTTTT+TGG | + | chr5_1:5419586-5419605 | None:intergenic | 35.0% |
| GGAAGCTGTTGAAAATTCAT+AGG | + | chr5_1:5419618-5419637 | None:intergenic | 35.0% | |
| CCAAATTAGGAATCTCTTGT+AGG | + | chr5_1:5419650-5419669 | None:intergenic | 35.0% | |
| CCTACAAGAGATTCCTAATT+TGG | - | chr5_1:5419647-5419666 | Msa0713300:intron | 35.0% | |
| GGCTAATATTAAGAAGGAAG+AGG | - | chr5_1:5414510-5414529 | Msa0713300:CDS | 35.0% | |
| TGATAAAGCCAAAGACATCA+TGG | - | chr5_1:5419905-5419924 | Msa0713300:intron | 35.0% | |
| AGTACTAGTAATTCCTTTGG+TGG | + | chr5_1:5414629-5414648 | None:intergenic | 35.0% | |
| ! | AGCAAGCATAGTTGTTATTG+TGG | + | chr5_1:5419974-5419993 | None:intergenic | 35.0% |
| ! | GTAGTCTTGAAGAGAATTGT+TGG | + | chr5_1:5420021-5420040 | None:intergenic | 35.0% |
| GGATTGAGATATAGTGACTT+TGG | - | chr5_1:5420391-5420410 | Msa0713300:intron | 35.0% | |
| AGATATAGTGACTTTGGTGA+TGG | - | chr5_1:5420397-5420416 | Msa0713300:intron | 35.0% | |
| ! | GATATAGTGACTTTGGTGAT+GGG | - | chr5_1:5420398-5420417 | Msa0713300:intron | 35.0% |
| ! | GTTTATATAATAGTGACGGG+AGG | + | chr5_1:5420512-5420531 | None:intergenic | 35.0% |
| TTAAGGCGAAAAAGTCATCA+TGG | + | chr5_1:5420660-5420679 | None:intergenic | 35.0% | |
| !!! | TGATGACTTTTTCGCCTTAA+AGG | - | chr5_1:5420660-5420679 | Msa0713300:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr5_1:5420735-5420754 | None:intergenic | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | - | chr5_1:5420736-5420755 | Msa0713300:intron | 35.0% |
| ! | GTGTGTAGAGTATTAATTGG+AGG | + | chr5_1:5420836-5420855 | None:intergenic | 35.0% |
| GATACCATGAACAAAAGTGA+AGG | - | chr5_1:5421171-5421190 | Msa0713300:CDS | 35.0% | |
| GACTTATTTAGGAATGCTTC+TGG | + | chr5_1:5421356-5421375 | None:intergenic | 35.0% | |
| CAATTGATGAATCCATGTCA+TGG | - | chr5_1:5421375-5421394 | Msa0713300:CDS | 35.0% | |
| CTACATTCAGATTTGTGTTG+CGG | + | chr5_1:5421422-5421441 | None:intergenic | 35.0% | |
| CTACAAAAATAACACAGAGG+TGG | + | chr5_1:5421447-5421466 | None:intergenic | 35.0% | |
| !!! | CACCTCTGTGTTATTTTTGT+AGG | - | chr5_1:5421445-5421464 | Msa0713300:intron | 35.0% |
| GTCCTACAAAAATAACACAG+AGG | + | chr5_1:5421450-5421469 | None:intergenic | 35.0% | |
| ! | TGTACCATTAAGTGTTGTTC+TGG | - | chr5_1:5421531-5421550 | Msa0713300:intron | 35.0% |
| TCAACCAGAACAACACTTAA+TGG | + | chr5_1:5421538-5421557 | None:intergenic | 35.0% | |
| ATCTCTTGTAGGAAGAGATG+AGG | + | chr5_1:5414317-5414336 | None:intergenic | 40.0% | |
| !! | TTCCTATTTTGGGAAACTCC+AGG | - | chr5_1:5414336-5414355 | Msa0713300:three_prime_UTR | 40.0% |
| TACCTGGAGTTTCCCAAAAT+AGG | + | chr5_1:5414341-5414360 | None:intergenic | 40.0% | |
| !!! | ATGTCTTTGGCTTTTTCAGC+TGG | + | chr5_1:5414595-5414614 | None:intergenic | 40.0% |
| GGAAAAGTCCATGATGTCTT+TGG | + | chr5_1:5414608-5414627 | None:intergenic | 40.0% | |
| ! | ATCATGGACTTTTCCACCAA+AGG | - | chr5_1:5414613-5414632 | Msa0713300:intron | 40.0% |
| CAGGTATAGATGGTACTTGA+GGG | + | chr5_1:5414717-5414736 | None:intergenic | 40.0% | |
| ACAGGTATAGATGGTACTTG+AGG | + | chr5_1:5414718-5414737 | None:intergenic | 40.0% | |
| AGTGAAGCTTTCCTAGTCAT+TGG | + | chr5_1:5414854-5414873 | None:intergenic | 40.0% | |
| CTAGGAAAGCTTCACTTCAT+CGG | - | chr5_1:5414858-5414877 | Msa0713300:intron | 40.0% | |
| !! | TTCATCGGTTCTTGGAGAAA+AGG | - | chr5_1:5414873-5414892 | Msa0713300:intron | 40.0% |
| TCTTGGAGAAAAGGAAGGAT+AGG | - | chr5_1:5414882-5414901 | Msa0713300:intron | 40.0% | |
| TTAAAGTAACACATGGGTGG+AGG | + | chr5_1:5415478-5415497 | None:intergenic | 40.0% | |
| CAGTTAAAGTAACACATGGG+TGG | + | chr5_1:5415481-5415500 | None:intergenic | 40.0% | |
| !! | GGTGTTGTTTCTGTATGAAC+TGG | - | chr5_1:5415514-5415533 | Msa0713300:intron | 40.0% |
| AACTGGATCAATCAGCTGTA+TGG | - | chr5_1:5415531-5415550 | Msa0713300:intron | 40.0% | |
| !!! | GTATGGCCCTCTATTTTTGT+AGG | - | chr5_1:5415548-5415567 | Msa0713300:intron | 40.0% |
| ! | TGAAGCTTTATGTTGTGTGG+AGG | + | chr5_1:5415749-5415768 | None:intergenic | 40.0% |
| TTCCACTCTCATAACTAGGA+TGG | - | chr5_1:5415772-5415791 | Msa0713300:intron | 40.0% | |
| AACCATCCTAGTTATGAGAG+TGG | + | chr5_1:5415777-5415796 | None:intergenic | 40.0% | |
| CTCATAACTAGGATGGTTCA+TGG | - | chr5_1:5415779-5415798 | Msa0713300:intron | 40.0% | |
| ! | GTTCATGGGTCGATTCAATA+AGG | - | chr5_1:5415794-5415813 | Msa0713300:intron | 40.0% |
| CGAAGCGAATTGAAACAGTT+TGG | - | chr5_1:5415844-5415863 | Msa0713300:CDS | 40.0% | |
| TCAAAGCGTACCAAACTAGA+TGG | - | chr5_1:5415957-5415976 | Msa0713300:CDS | 40.0% | |
| AGTCCACCAAAACTATCAGA+GGG | - | chr5_1:5416060-5416079 | Msa0713300:CDS | 40.0% | |
| !!! | TATCCCTCTGATAGTTTTGG+TGG | + | chr5_1:5416066-5416085 | None:intergenic | 40.0% |
| CAAATCCGTTGTAGTCTAGT+TGG | - | chr5_1:5416294-5416313 | Msa0713300:intron | 40.0% | |
| GTCTAGTTGGTCAGGATATT+CGG | - | chr5_1:5416307-5416326 | Msa0713300:intron | 40.0% | |
| !! | GTTTTGTTGAACTGTGAAGG+TGG | - | chr5_1:5416410-5416429 | Msa0713300:intron | 40.0% |
| ! | AGGTGGGAGGAAAGAAATTT+TGG | - | chr5_1:5416427-5416446 | Msa0713300:intron | 40.0% |
| TGCTAACATGATGCAAAACG+TGG | - | chr5_1:5416848-5416867 | Msa0713300:intron | 40.0% | |
| GCTAACATGATGCAAAACGT+GGG | - | chr5_1:5416849-5416868 | Msa0713300:intron | 40.0% | |
| AAAACAACAGAGGCTGTGTT+TGG | + | chr5_1:5417105-5417124 | None:intergenic | 40.0% | |
| ! | CACACATACGTTGACTGAAA+AGG | + | chr5_1:5417349-5417368 | None:intergenic | 40.0% |
| CGGTAGTCTCAGATAGATAA+TGG | + | chr5_1:5417775-5417794 | None:intergenic | 40.0% | |
| TAGGGTCAAGTATCTATCGA+AGG | + | chr5_1:5417813-5417832 | None:intergenic | 40.0% | |
| TAGATACTTGACCCTACTTG+AGG | - | chr5_1:5417817-5417836 | Msa0713300:intron | 40.0% | |
| !! | ACATTTTTAGACATGGGCTC+TGG | - | chr5_1:5417910-5417929 | Msa0713300:intron | 40.0% |
| !! | CATTTTTAGACATGGGCTCT+GGG | - | chr5_1:5417911-5417930 | Msa0713300:intron | 40.0% |
| !! | ATTTTTAGACATGGGCTCTG+GGG | - | chr5_1:5417912-5417931 | Msa0713300:intron | 40.0% |
| ! | TGCACGTTTTCTTCCTAAGA+AGG | - | chr5_1:5417998-5418017 | Msa0713300:intron | 40.0% |
| ! | GCACGTTTTCTTCCTAAGAA+GGG | - | chr5_1:5417999-5418018 | Msa0713300:intron | 40.0% |
| GTTGCAAATGAACTTCTGCA+TGG | - | chr5_1:5418468-5418487 | Msa0713300:intron | 40.0% | |
| GACTCTCTGCACAGTAAAAT+TGG | - | chr5_1:5418557-5418576 | Msa0713300:intron | 40.0% | |
| AACCTTTATCTTTGCCCAAG+TGG | - | chr5_1:5418811-5418830 | Msa0713300:intron | 40.0% | |
| GCAAGTTGCAACCACTAAAA+TGG | - | chr5_1:5418916-5418935 | Msa0713300:intron | 40.0% | |
| ! | AGGTCCCATATCCATTTTAG+TGG | + | chr5_1:5418930-5418949 | None:intergenic | 40.0% |
| GTGTACTACTTAAGAACGTG+TGG | + | chr5_1:5419044-5419063 | None:intergenic | 40.0% | |
| !! | CTGTTTTTCATTTGGGTCCA+TGG | + | chr5_1:5419085-5419104 | None:intergenic | 40.0% |
| GTATGTCAATTATACCGGGA+CGG | + | chr5_1:5419224-5419243 | None:intergenic | 40.0% | |
| TAGGTGGAGAAAGTCTTAGT+TGG | + | chr5_1:5419499-5419518 | None:intergenic | 40.0% | |
| ATCTCTTGTAGGAAGAGATG+AGG | + | chr5_1:5414317-5414336 | None:intergenic | 40.0% | |
| TTCCTAATTTGGGAAACTCC+AGG | - | chr5_1:5419658-5419677 | Msa0713300:intron | 40.0% | |
| TACCTGGAGTTTCCCAAATT+AGG | + | chr5_1:5419663-5419682 | None:intergenic | 40.0% | |
| !! | ATGTCTTTGGCTTTATCAGC+TGG | + | chr5_1:5419903-5419922 | None:intergenic | 40.0% |
| GGAAAAGTCCATGATGTCTT+TGG | + | chr5_1:5414608-5414627 | None:intergenic | 40.0% | |
| ! | ATCATGGACTTTTCCACCAA+AGG | - | chr5_1:5414613-5414632 | Msa0713300:intron | 40.0% |
| !! | AGGGTGTTTGATTTGTGTCA+TGG | - | chr5_1:5420102-5420121 | Msa0713300:intron | 40.0% |
| AGTGAAGCTTTCCTAGTCAT+TGG | + | chr5_1:5414854-5414873 | None:intergenic | 40.0% | |
| CTAGGAAAGCTTCACTTCAT+CGG | - | chr5_1:5414858-5414877 | Msa0713300:intron | 40.0% | |
| !! | TTCATCGGTTCTTGGAGAAA+AGG | - | chr5_1:5414873-5414892 | Msa0713300:intron | 40.0% |
| TCTTGGAGAAAAGGAAGGAT+AGG | - | chr5_1:5414882-5414901 | Msa0713300:intron | 40.0% | |
| CGCCTTAAAGGTAGAGAATT+TGG | - | chr5_1:5420672-5420691 | Msa0713300:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr5_1:5420974-5420993 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr5_1:5420974-5420993 | Msa0713300:intron | 40.0% |
| TTTCTGCAGAATTGCTGCAA+GGG | - | chr5_1:5421310-5421329 | Msa0713300:CDS | 40.0% | |
| TCGACATAAGAATGATACCG+AGG | + | chr5_1:5421637-5421656 | None:intergenic | 40.0% | |
| !! | AGGGTGCTTGATTTGTGTCA+TGG | - | chr5_1:5414774-5414793 | Msa0713300:intron | 45.0% |
| !! | AGCTTCACTTCATCGGTTCT+TGG | - | chr5_1:5414865-5414884 | Msa0713300:intron | 45.0% |
| TCGGTTCTTGGAGAAAAGGA+AGG | - | chr5_1:5414877-5414896 | Msa0713300:intron | 45.0% | |
| TTGATTGAGAGAGATCTGGC+TGG | + | chr5_1:5414912-5414931 | None:intergenic | 45.0% | |
| ATCCATGACATGGCTCTCTT+TGG | - | chr5_1:5415413-5415432 | Msa0713300:intron | 45.0% | |
| !!! | CTCTGATAGTTTTGGTGGAC+TGG | + | chr5_1:5416061-5416080 | None:intergenic | 45.0% |
| CAGTCCACCAAAACTATCAG+AGG | - | chr5_1:5416059-5416078 | Msa0713300:CDS | 45.0% | |
| ! | CAACGGATTTGTGCAAGCAA+AGG | + | chr5_1:5416285-5416304 | None:intergenic | 45.0% |
| CCTGACCAACTAGACTACAA+CGG | + | chr5_1:5416302-5416321 | None:intergenic | 45.0% | |
| ATGCAAAACGTGGGCAGTTA+TGG | - | chr5_1:5416858-5416877 | Msa0713300:intron | 45.0% | |
| TGCAAAACGTGGGCAGTTAT+GGG | - | chr5_1:5416859-5416878 | Msa0713300:intron | 45.0% | |
| ATGACCCACAAAGATGCTTG+AGG | - | chr5_1:5417144-5417163 | Msa0713300:intron | 45.0% | |
| ACCAACTGAGCTAAGTTCAC+AGG | - | chr5_1:5417563-5417582 | Msa0713300:intron | 45.0% | |
| CCAACTGAGCTAAGTTCACA+GGG | - | chr5_1:5417564-5417583 | Msa0713300:intron | 45.0% | |
| TGAGACTACCGACACATCAT+CGG | - | chr5_1:5417784-5417803 | Msa0713300:intron | 45.0% | |
| TGCAACATGTGGCAAGTTTG+CGG | + | chr5_1:5417982-5418001 | None:intergenic | 45.0% | |
| GGAAGAAAACGTGCAACATG+TGG | + | chr5_1:5417993-5418012 | None:intergenic | 45.0% | |
| CGTGGGATTAAGAAGGAAGA+TGG | + | chr5_1:5418528-5418547 | None:intergenic | 45.0% | |
| GGTCAATCGTGGGATTAAGA+AGG | + | chr5_1:5418535-5418554 | None:intergenic | 45.0% | |
| ! | TTTTACTGTGCAGAGAGTCG+AGG | + | chr5_1:5418556-5418575 | None:intergenic | 45.0% |
| GACCACTTGGGCAAAGATAA+AGG | + | chr5_1:5418816-5418835 | None:intergenic | 45.0% | |
| ATGGAAGAGTTGCTCCTTGT+AGG | + | chr5_1:5419066-5419085 | None:intergenic | 45.0% | |
| TACAAGGAGCAACTCTTCCA+TGG | - | chr5_1:5419065-5419084 | Msa0713300:intron | 45.0% | |
| AATAAATACTCCCTCCGTCC+CGG | + | chr5_1:5419433-5419452 | None:intergenic | 45.0% | |
| TGAGAGTGAAGAGAAAGCAG+TGG | + | chr5_1:5419539-5419558 | None:intergenic | 45.0% | |
| !! | AGCTTCACTTCATCGGTTCT+TGG | - | chr5_1:5414865-5414884 | Msa0713300:intron | 45.0% |
| TCGGTTCTTGGAGAAAAGGA+AGG | - | chr5_1:5414877-5414896 | Msa0713300:intron | 45.0% | |
| TTGATTGAGAGAGATCTGGC+AGG | + | chr5_1:5414912-5414931 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr5_1:5420973-5420992 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr5_1:5420973-5420992 | Msa0713300:intron | 45.0% |
| GACATGACTCAGTGTATCCT+CGG | + | chr5_1:5421146-5421165 | None:intergenic | 45.0% | |
| !! | GGCTCCTTCACTTTTGTTCA+TGG | + | chr5_1:5421178-5421197 | None:intergenic | 45.0% |
| GTTTCTGCAGAATTGCTGCA+AGG | - | chr5_1:5421309-5421328 | Msa0713300:CDS | 45.0% | |
| ATCCATGTCATGGCTATCCT+TGG | - | chr5_1:5421385-5421404 | Msa0713300:CDS | 45.0% | |
| GATTTGTGTTGCGGTGAATG+TGG | + | chr5_1:5421413-5421432 | None:intergenic | 45.0% | |
| !! | AATAAATACATTTATTATTT+GGG | + | chr5_1:5416662-5416681 | None:intergenic | 5.0% |
| !! | TAATAAATACATTTATTATT+TGG | + | chr5_1:5416663-5416682 | None:intergenic | 5.0% |
| !! | AATTAAACTAAATTAATAAA+AGG | - | chr5_1:5416903-5416922 | Msa0713300:intron | 5.0% |
| !!! | TTTTTTTTTTTTTCATTTTT+AGG | - | chr5_1:5417173-5417192 | Msa0713300:intron | 5.0% |
| !!! | ATTTCTTTTTATTTTTTTTA+AGG | - | chr5_1:5417407-5417426 | Msa0713300:intron | 5.0% |
| CTTCTGCAGAATTGCAGCCA+GGG | - | chr5_1:5415341-5415360 | Msa0713300:intron | 50.0% | |
| GCTTGTTTGATATGGTGCCC+TGG | + | chr5_1:5415361-5415380 | None:intergenic | 50.0% | |
| TGCCAAAGAGAGCCATGTCA+TGG | + | chr5_1:5415418-5415437 | None:intergenic | 50.0% | |
| CCGTTGTAGTCTAGTTGGTC+AGG | - | chr5_1:5416299-5416318 | Msa0713300:intron | 50.0% | |
| TGTTGAACTGTGAAGGTGGG+AGG | - | chr5_1:5416414-5416433 | Msa0713300:intron | 50.0% | |
| ! | TTGTGTGAGCTCTAGCCACT+AGG | + | chr5_1:5417474-5417493 | None:intergenic | 50.0% |
| ! | TTGTGGAGAAGTGGAGTGTC+CGG | - | chr5_1:5417499-5417518 | Msa0713300:intron | 50.0% |
| CCCTGTGAACTTAGCTCAGT+TGG | + | chr5_1:5417567-5417586 | None:intergenic | 50.0% | |
| GAGACTACCGACACATCATC+GGG | - | chr5_1:5417785-5417804 | Msa0713300:intron | 50.0% | |
| GGTGAAATGTGGCCCTTCTT+AGG | + | chr5_1:5418014-5418033 | None:intergenic | 50.0% | |
| AGAGAGTCGAGGTCAATCGT+GGG | + | chr5_1:5418545-5418564 | None:intergenic | 50.0% | |
| !! | GACAGAAGTGTTGGGATGAG+AGG | + | chr5_1:5418950-5418969 | None:intergenic | 50.0% |
| TGTCAATTATACCGGGACGG+AGG | + | chr5_1:5419221-5419240 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr5_1:5419416-5419435 | Msa0713300:intron | 50.0% | |
| ACGGGAGGGAGTCCTAAAAT+TGG | + | chr5_1:5420497-5420516 | None:intergenic | 50.0% | |
| ! | TGTATCCTCGGCTCGACTTT+AGG | + | chr5_1:5421134-5421153 | None:intergenic | 50.0% |
| TGCCAAGGATAGCCATGACA+TGG | + | chr5_1:5421390-5421409 | None:intergenic | 50.0% | |
| GCTTCTGCAGAATTGCAGCC+AGG | - | chr5_1:5415340-5415359 | Msa0713300:intron | 55.0% | |
| GACTTGAACCCGGGTCTTTC+GGG | + | chr5_1:5416339-5416358 | None:intergenic | 55.0% | |
| GGACTTGAACCCGGGTCTTT+CGG | + | chr5_1:5416340-5416359 | None:intergenic | 55.0% | |
| AAAGACCCGGGTTCAAGTCC+CGG | - | chr5_1:5416340-5416359 | Msa0713300:intron | 55.0% | |
| ! | TGTGGAGAAGTGGAGTGTCC+GGG | - | chr5_1:5417500-5417519 | Msa0713300:intron | 55.0% |
| AGTGTCCGGGGTTCGAACTT+CGG | - | chr5_1:5417513-5417532 | Msa0713300:intron | 55.0% | |
| GAAGGAGCCCGATGATGTGT+CGG | + | chr5_1:5417795-5417814 | None:intergenic | 55.0% | |
| GGCAAGTTTGCGGTATACCG+TGG | + | chr5_1:5417972-5417991 | None:intergenic | 55.0% | |
| GGTGGGTAGTCGGTGAAATG+TGG | + | chr5_1:5418025-5418044 | None:intergenic | 55.0% | |
| ! | ATTTCACCGACTACCCACCG+AGG | - | chr5_1:5418026-5418045 | Msa0713300:intron | 55.0% |
| ACGATCAAGGATGCCTCGGT+GGG | + | chr5_1:5418042-5418061 | None:intergenic | 55.0% | |
| CCAGACGATCAAGGATGCCT+CGG | + | chr5_1:5418046-5418065 | None:intergenic | 55.0% | |
| AGGCATCCTTGATCGTCTGG+CGG | - | chr5_1:5418046-5418065 | Msa0713300:intron | 55.0% | |
| CAGAGAGTCGAGGTCAATCG+TGG | + | chr5_1:5418546-5418565 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5_1:5419420-5419439 | Msa0713300:intron | 55.0% | |
| CTCATCCTAAAGTCGAGCCG+AGG | - | chr5_1:5421126-5421145 | Msa0713300:intron | 55.0% | |
| ! | TTGCGGTGAATGTGGTGCCA+AGG | + | chr5_1:5421405-5421424 | None:intergenic | 55.0% |
| CATTGCCGGGACTTGAACCC+GGG | + | chr5_1:5416348-5416367 | None:intergenic | 60.0% | |
| CCATTGCCGGGACTTGAACC+CGG | + | chr5_1:5416349-5416368 | None:intergenic | 60.0% | |
| ! | GTGGAGAAGTGGAGTGTCCG+GGG | - | chr5_1:5417501-5417520 | Msa0713300:intron | 60.0% |
| AGGATGCCTCGGTGGGTAGT+CGG | + | chr5_1:5418035-5418054 | None:intergenic | 60.0% | |
| GACGATCAAGGATGCCTCGG+TGG | + | chr5_1:5418043-5418062 | None:intergenic | 60.0% | |
| ! | CCGAGGCATCCTTGATCGTC+TGG | - | chr5_1:5418043-5418062 | Msa0713300:intron | 60.0% |
| CATCCTTGATCGTCTGGCGG+TGG | - | chr5_1:5418049-5418068 | Msa0713300:intron | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5_1:5419419-5419438 | Msa0713300:intron | 60.0% | |
| CGGCTCTCACCCGAAAGACC+CGG | - | chr5_1:5416327-5416346 | Msa0713300:intron | 65.0% | |
| GGCTCTCACCCGAAAGACCC+GGG | - | chr5_1:5416328-5416347 | Msa0713300:intron | 65.0% | |
| CCGGGTTCAAGTCCCGGCAA+TGG | - | chr5_1:5416346-5416365 | Msa0713300:intron | 65.0% | |
| AGGGGCCGAAGTTCGAACCC+CGG | + | chr5_1:5417521-5417540 | None:intergenic | 65.0% | |
| CCTCCACCGCCAGACGATCA+AGG | + | chr5_1:5418055-5418074 | None:intergenic | 65.0% | |
| CCTTGATCGTCTGGCGGTGG+AGG | - | chr5_1:5418052-5418071 | Msa0713300:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 5414208 | 5421704 | 5414208 | ID=Msa0713300;Name=Msa0713300 |
| chr5_1 | mRNA | 5414208 | 5421704 | 5414208 | ID=Msa0713300-mRNA-1;Parent=Msa0713300;Name=Msa0713300-mRNA-1;_AED=0.23;_eAED=0.23;_QI=64|0.71|0.75|1|0.71|0.75|8|238|343 |
| chr5_1 | exon | 5414208 | 5414593 | 5414208 | ID=Msa0713300-mRNA-1:exon:2410;Parent=Msa0713300-mRNA-1 |
| chr5_1 | exon | 5415680 | 5415737 | 5415680 | ID=Msa0713300-mRNA-1:exon:2409;Parent=Msa0713300-mRNA-1 |
| chr5_1 | exon | 5415841 | 5416103 | 5415841 | ID=Msa0713300-mRNA-1:exon:2408;Parent=Msa0713300-mRNA-1 |
| chr5_1 | exon | 5416233 | 5416312 | 5416233 | ID=Msa0713300-mRNA-1:exon:2407;Parent=Msa0713300-mRNA-1 |
| chr5_1 | exon | 5420427 | 5420520 | 5420427 | ID=Msa0713300-mRNA-1:exon:2406;Parent=Msa0713300-mRNA-1 |
| chr5_1 | exon | 5421009 | 5421066 | 5421009 | ID=Msa0713300-mRNA-1:exon:2405;Parent=Msa0713300-mRNA-1 |
| chr5_1 | exon | 5421167 | 5421411 | 5421167 | ID=Msa0713300-mRNA-1:exon:2404;Parent=Msa0713300-mRNA-1 |
| chr5_1 | exon | 5421555 | 5421704 | 5421555 | ID=Msa0713300-mRNA-1:exon:2403;Parent=Msa0713300-mRNA-1 |
| chr5_1 | five_prime_UTR | 5421641 | 5421704 | 5421641 | ID=Msa0713300-mRNA-1:five_prime_utr;Parent=Msa0713300-mRNA-1 |
| chr5_1 | CDS | 5421555 | 5421640 | 5421555 | ID=Msa0713300-mRNA-1:cds;Parent=Msa0713300-mRNA-1 |
| chr5_1 | CDS | 5421167 | 5421411 | 5421167 | ID=Msa0713300-mRNA-1:cds;Parent=Msa0713300-mRNA-1 |
| chr5_1 | CDS | 5421009 | 5421066 | 5421009 | ID=Msa0713300-mRNA-1:cds;Parent=Msa0713300-mRNA-1 |
| chr5_1 | CDS | 5420427 | 5420520 | 5420427 | ID=Msa0713300-mRNA-1:cds;Parent=Msa0713300-mRNA-1 |
| chr5_1 | CDS | 5416233 | 5416312 | 5416233 | ID=Msa0713300-mRNA-1:cds;Parent=Msa0713300-mRNA-1 |
| chr5_1 | CDS | 5415841 | 5416103 | 5415841 | ID=Msa0713300-mRNA-1:cds;Parent=Msa0713300-mRNA-1 |
| chr5_1 | CDS | 5415680 | 5415737 | 5415680 | ID=Msa0713300-mRNA-1:cds;Parent=Msa0713300-mRNA-1 |
| chr5_1 | CDS | 5414446 | 5414593 | 5414446 | ID=Msa0713300-mRNA-1:cds;Parent=Msa0713300-mRNA-1 |
| chr5_1 | three_prime_UTR | 5414208 | 5414445 | 5414208 | ID=Msa0713300-mRNA-1:three_prime_utr;Parent=Msa0713300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
