Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796920 | XP_003611395.1 | 87.500 | 184 | 12 | 3 | 131 | 314 | 1 | 173 | 2.41e-107 | 320 |
| Msa0796920 | XP_003611395.1 | 90.840 | 131 | 12 | 0 | 1 | 131 | 1 | 131 | 1.36e-81 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796920 | sp|Q84R94|TI10A_ORYSJ | 44.218 | 147 | 65 | 4 | 164 | 298 | 73 | 214 | 1.17e-26 | 107 |
| Msa0796920 | sp|Q84R94|TI10A_ORYSJ | 39.007 | 141 | 65 | 5 | 34 | 156 | 73 | 210 | 1.35e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796920 | G7JYL9 | 87.500 | 184 | 12 | 3 | 131 | 314 | 1 | 173 | 1.15e-107 | 320 |
| Msa0796920 | G7JYL9 | 90.840 | 131 | 12 | 0 | 1 | 131 | 1 | 131 | 6.49e-82 | 254 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0796920 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0713300 | Msa0796920 | 0.887438 | 1.426737e-72 | -8.615850e-47 |
| Msa0755000 | Msa0796920 | 0.885972 | 5.125200e-72 | -8.615850e-47 |
| Msa0796920 | Msa1176050 | 0.808882 | 2.488907e-50 | -8.615850e-47 |
| Msa0796920 | Msa1307210 | 0.808572 | 2.900084e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796920 | MtrunA17_Chr5g0399881 | 87.500 | 184 | 12 | 3 | 131 | 314 | 1 | 173 | 2.21e-111 | 320 |
| Msa0796920 | MtrunA17_Chr5g0399881 | 90.840 | 131 | 12 | 0 | 1 | 131 | 1 | 131 | 1.25e-85 | 254 |
| Msa0796920 | MtrunA17_Chr5g0399861 | 85.635 | 181 | 19 | 3 | 131 | 311 | 1 | 174 | 4.28e-109 | 314 |
| Msa0796920 | MtrunA17_Chr5g0399861 | 91.603 | 131 | 11 | 0 | 1 | 131 | 1 | 131 | 1.43e-86 | 257 |
| Msa0796920 | MtrunA17_Chr5g0399851 | 70.068 | 147 | 29 | 5 | 159 | 298 | 6 | 144 | 5.22e-62 | 193 |
| Msa0796920 | MtrunA17_Chr5g0399851 | 70.000 | 110 | 25 | 3 | 29 | 131 | 6 | 114 | 5.94e-46 | 152 |
| Msa0796920 | MtrunA17_Chr2g0301131 | 41.089 | 202 | 68 | 8 | 118 | 293 | 69 | 245 | 2.68e-32 | 120 |
| Msa0796920 | MtrunA17_Chr2g0301131 | 40.441 | 136 | 41 | 4 | 25 | 129 | 99 | 225 | 1.55e-21 | 91.7 |
| Msa0796920 | MtrunA17_Chr4g0070271 | 30.588 | 170 | 73 | 4 | 135 | 299 | 73 | 202 | 1.53e-17 | 79.7 |
| Msa0796920 | MtrunA17_Chr4g0070271 | 32.331 | 133 | 51 | 4 | 5 | 132 | 73 | 171 | 2.68e-12 | 65.1 |
| Msa0796920 | MtrunA17_Chr8g0344481 | 28.049 | 164 | 108 | 2 | 114 | 274 | 52 | 208 | 3.94e-13 | 67.8 |
| Msa0796920 | MtrunA17_Chr2g0302041 | 27.692 | 130 | 85 | 2 | 156 | 276 | 40 | 169 | 2.11e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0796920 | AT1G19180.2 | 42.537 | 134 | 71 | 4 | 167 | 296 | 53 | 184 | 2.25e-26 | 103 |
| Msa0796920 | AT1G19180.2 | 40.594 | 101 | 51 | 3 | 37 | 129 | 53 | 152 | 5.74e-16 | 75.1 |
| Msa0796920 | AT1G19180.1 | 42.537 | 134 | 71 | 4 | 167 | 296 | 119 | 250 | 1.56e-25 | 102 |
| Msa0796920 | AT1G19180.1 | 40.594 | 101 | 51 | 3 | 37 | 129 | 119 | 218 | 2.51e-15 | 74.7 |
| Msa0796920 | AT1G19180.3 | 42.537 | 134 | 71 | 4 | 167 | 296 | 119 | 250 | 1.56e-25 | 102 |
| Msa0796920 | AT1G19180.3 | 40.594 | 101 | 51 | 3 | 37 | 129 | 119 | 218 | 2.51e-15 | 74.7 |
| Msa0796920 | AT1G74950.1 | 39.855 | 138 | 71 | 3 | 167 | 294 | 112 | 247 | 1.40e-21 | 92.0 |
| Msa0796920 | AT1G74950.1 | 41.284 | 109 | 48 | 2 | 37 | 129 | 112 | 220 | 4.03e-17 | 79.7 |
| Msa0796920 | AT1G74950.2 | 41.284 | 109 | 48 | 2 | 37 | 129 | 112 | 220 | 3.03e-17 | 79.7 |
| Msa0796920 | AT1G74950.2 | 40.909 | 110 | 55 | 2 | 167 | 266 | 112 | 221 | 1.60e-16 | 77.4 |
| Msa0796920 | AT1G17380.2 | 37.302 | 126 | 71 | 3 | 163 | 280 | 58 | 183 | 6.64e-15 | 73.6 |
| Msa0796920 | AT1G72450.1 | 37.288 | 118 | 70 | 2 | 169 | 282 | 101 | 218 | 1.51e-14 | 72.8 |
| Msa0796920 | AT1G17380.1 | 37.302 | 126 | 71 | 3 | 163 | 280 | 87 | 212 | 2.65e-14 | 72.4 |
| Msa0796920 | AT5G20900.1 | 33.566 | 143 | 73 | 5 | 154 | 277 | 28 | 167 | 1.16e-12 | 65.9 |
| Msa0796920 | AT1G70700.2 | 27.604 | 192 | 120 | 6 | 86 | 274 | 46 | 221 | 3.21e-11 | 62.8 |
Find 69 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTACAAGAGATTCCTATTT+TGG | 0.046444 | 5_3:-8966069 | Msa0796920:CDS |
| CCTACAAGAGATTCCTATTT+TGG | 0.046444 | 5_3:-8971174 | Msa0796920:CDS |
| CCATCTATACCTGTTATTTA+TGG | 0.164541 | 5_3:-8965651 | Msa0796920:intron |
| CCATCTATACCTGTTATTTA+TGG | 0.164541 | 5_3:-8970774 | Msa0796920:intron |
| ATTCATCAATTGACTTATTT+AGG | 0.185988 | 5_3:+8964580 | None:intergenic |
| TATATTTCCGCTCCCATAAC+TGG | 0.245992 | 5_3:-8964261 | None:intergenic |
| AGCTTCACTTCATCGGTTCT+TGG | 0.292747 | 5_3:-8965508 | Msa0796920:CDS |
| AGCTTCACTTCATCGGTTCT+TGG | 0.292747 | 5_3:-8970624 | Msa0796920:CDS |
| TCAACCAGAACAACACTTAA+TGG | 0.328246 | 5_3:+8964411 | None:intergenic |
| CCAAAATAGGAATCTCTTGT+AGG | 0.331403 | 5_3:+8966069 | None:intergenic |
| CCAAAATAGGAATCTCTTGT+AGG | 0.331403 | 5_3:+8971174 | None:intergenic |
| TGTACCATTAAGTGTTGTTC+TGG | 0.342549 | 5_3:-8964415 | Msa0796920:three_prime_UTR |
| AATATAAAGCTTTATGTTCA+TGG | 0.346241 | 5_3:+8964278 | None:intergenic |
| CCATGAACCGTCCCAGTTAT+GGG | 0.392251 | 5_3:+8964249 | None:intergenic |
| TACCTGGAGTTTCCCAAAAT+AGG | 0.395618 | 5_3:+8966056 | None:intergenic |
| TACCTGGAGTTTCCCAAAAT+AGG | 0.395618 | 5_3:+8971161 | None:intergenic |
| GGAAAAGTCCATGATGTCTT+TGG | 0.398667 | 5_3:+8970893 | None:intergenic |
| GGAAAAGTCCATGATGTCTT+TGG | 0.411671 | 5_3:+8965788 | None:intergenic |
| AGTGAAGCTTTCCTCGTCAT+TGG | 0.416178 | 5_3:+8970638 | None:intergenic |
| ATGTCTTTGGCTTTATCAGC+TGG | 0.417227 | 5_3:+8965801 | None:intergenic |
| GCTGGATTACTTGTTTGATA+AGG | 0.423471 | 5_3:+8964609 | None:intergenic |
| AGTGAAGCTTTCCTAGTCAT+TGG | 0.425048 | 5_3:+8965522 | None:intergenic |
| TGAAGTACTAGTAATTCCTT+TGG | 0.428902 | 5_3:+8965764 | None:intergenic |
| GACTTATTTAGGAATGCTGC+TGG | 0.431039 | 5_3:+8964591 | None:intergenic |
| GTAGTCTTGAAGAGAATTGT+TGG | 0.447616 | 5_3:+8965683 | None:intergenic |
| CAAATGACAATCTTCTATGA+TGG | 0.453411 | 5_3:-8965849 | Msa0796920:CDS |
| CAAATGACAATCTTCTATGA+TGG | 0.453411 | 5_3:-8970954 | Msa0796920:CDS |
| AATGAAGGCTAATGTTAAGA+AGG | 0.454162 | 5_3:-8965889 | Msa0796920:CDS |
| AATGAAGGCTAATGTTAAGA+AGG | 0.454162 | 5_3:-8970994 | Msa0796920:CDS |
| TTCATCGGTTCTTGGAGAAA+AGG | 0.463618 | 5_3:-8965500 | Msa0796920:CDS |
| TTCATCGGTTCTTGGAGAAA+AGG | 0.463618 | 5_3:-8970616 | Msa0796920:CDS |
| ATATAAAGCTTTATGTTCAT+GGG | 0.465808 | 5_3:+8964279 | None:intergenic |
| GGAAGCTGTTGAAAATTCAT+AGG | 0.469618 | 5_3:+8966101 | None:intergenic |
| GGAAGCTGTTGAAAATTCAT+AGG | 0.469618 | 5_3:+8971206 | None:intergenic |
| AGTAAGCATAGTTGTTATTG+TGG | 0.472037 | 5_3:+8970841 | None:intergenic |
| CCATAAATAACAGGTATAGA+TGG | 0.477854 | 5_3:+8965651 | None:intergenic |
| CCATAAATAACAGGTATAGA+TGG | 0.477854 | 5_3:+8970774 | None:intergenic |
| AGTACTAGTAATTCCTTTGG+TGG | 0.499055 | 5_3:+8965767 | None:intergenic |
| TAGTCTTGAAGAGAATTGTT+GGG | 0.502082 | 5_3:+8965684 | None:intergenic |
| ATCCATGTCATGGCTATCCT+TGG | 0.509457 | 5_3:-8964559 | Msa0796920:CDS |
| AGCAAGCATAGTTGTTATTG+TGG | 0.514503 | 5_3:+8965730 | None:intergenic |
| CGAGGAAAGCTTCACTTCAT+CGG | 0.519369 | 5_3:-8970631 | Msa0796920:CDS |
| CTAGGAAAGCTTCACTTCAT+CGG | 0.529148 | 5_3:-8965515 | Msa0796920:CDS |
| AAATGACAATCTTCTATGAT+GGG | 0.538308 | 5_3:-8965848 | Msa0796920:CDS |
| AAATGACAATCTTCTATGAT+GGG | 0.538308 | 5_3:-8970953 | Msa0796920:CDS |
| CTACATTCAGATTTGTGTTG+CGG | 0.544643 | 5_3:+8964525 | None:intergenic |
| ATCTCTTGTAGGAAGAGATG+AGG | 0.564072 | 5_3:+8966080 | None:intergenic |
| ATCTCTTGTAGGAAGAGATG+AGG | 0.564072 | 5_3:+8971185 | None:intergenic |
| TCTTGGAGAAAAGGAAGGAT+AGG | 0.567398 | 5_3:-8965491 | Msa0796920:intron |
| TCTTGGAGAAAAGGAAGGAT+AGG | 0.567398 | 5_3:-8970607 | Msa0796920:intron |
| TATAAAGCTTTATGTTCATG+GGG | 0.577563 | 5_3:+8964280 | None:intergenic |
| AACCGTCCCAGTTATGGGAG+CGG | 0.578665 | 5_3:+8964254 | None:intergenic |
| GGCTAATGTTAAGAAGGAAG+AGG | 0.580916 | 5_3:-8965883 | Msa0796920:CDS |
| GGCTAATGTTAAGAAGGAAG+AGG | 0.580916 | 5_3:-8970988 | Msa0796920:CDS |
| TGATAAAGCCAAAGACATCA+TGG | 0.585378 | 5_3:-8965796 | Msa0796920:CDS |
| TCGGTTCTTGGAGAAAAGGA+AGG | 0.585705 | 5_3:-8965496 | Msa0796920:CDS |
| TCGGTTCTTGGAGAAAAGGA+AGG | 0.585705 | 5_3:-8970612 | Msa0796920:CDS |
| GTTTCTGCAGAATTGCTGCA+AGG | 0.606526 | 5_3:-8964635 | Msa0796920:intron |
| ATTCAGATTTACCAATGACT+AGG | 0.608086 | 5_3:-8965533 | Msa0796920:intron |
| TTTCTGCAGAATTGCTGCAA+GGG | 0.611240 | 5_3:-8964634 | Msa0796920:intron |
| CAATTGATGAATCCATGTCA+TGG | 0.612586 | 5_3:-8964569 | Msa0796920:CDS |
| TGCCAAGGATAGCCATGACA+TGG | 0.617530 | 5_3:+8964557 | None:intergenic |
| GTACATATTAGTTAATGTTG+AGG | 0.621240 | 5_3:-8964450 | Msa0796920:three_prime_UTR |
| GATTTGTGTTGCGGTGAATG+TGG | 0.622415 | 5_3:+8964534 | None:intergenic |
| ATTGTTATAGAAGATGTCCT+CGG | 0.627775 | 5_3:-8964329 | Msa0796920:three_prime_UTR |
| TTGCGGTGAATGTGGTGCCA+AGG | 0.648709 | 5_3:+8964542 | None:intergenic |
| ATTCAGATTTACCAATGACG+AGG | 0.687022 | 5_3:-8970649 | Msa0796920:intron |
| ATAAAGCTTTATGTTCATGG+GGG | 0.713830 | 5_3:+8964281 | None:intergenic |
| TCGACATAAGAATGATACCG+AGG | 0.723742 | 5_3:+8964312 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATGGTAAATTTTTTT+TGG | - | chr5_3:8964794-8964813 | Msa0796920:intron | 10.0% |
| !! | AATAAAATTAAATGTAAGTT+TGG | - | chr5_3:8965063-8965082 | Msa0796920:intron | 10.0% |
| !!! | AAAATTGATTTTGAATAAAT+TGG | + | chr5_3:8965307-8965326 | None:intergenic | 10.0% |
| !!! | TCTTTTCTTTTTTTAAATAA+AGG | - | chr5_3:8966496-8966515 | Msa0796920:intron | 10.0% |
| !!! | CTTTTCTTTTTTTAAATAAA+GGG | - | chr5_3:8966497-8966516 | Msa0796920:intron | 10.0% |
| !! | TAAAAAGTTAAAATACTTAT+AGG | + | chr5_3:8966917-8966936 | None:intergenic | 10.0% |
| !! | AAAAATTCATATTTAATTCA+TGG | - | chr5_3:8967112-8967131 | Msa0796920:intron | 10.0% |
| !!! | ACTATGTTAATATTTTATTA+AGG | + | chr5_3:8967569-8967588 | None:intergenic | 10.0% |
| !!! | TTAGAAAAATGTATTTTTAA+AGG | - | chr5_3:8968275-8968294 | Msa0796920:intron | 10.0% |
| !!! | TCTCATTTATTTATTTTTAA+AGG | + | chr5_3:8968976-8968995 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966050-8966069 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966050-8966069 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966050-8966069 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966050-8966069 | None:intergenic | 100.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966057-8966076 | None:intergenic | 100.0% |
| !! | AAAAATTTACCATAAATAAC+AGG | + | chr5_3:8964792-8964811 | None:intergenic | 15.0% |
| !! | TATTTACATGACTATTTATT+TGG | - | chr5_3:8965734-8965753 | Msa0796920:CDS | 15.0% |
| !! | ATTTACATGACTATTTATTT+GGG | - | chr5_3:8965735-8965754 | Msa0796920:CDS | 15.0% |
| !!! | AAATATAAAGTTTTATGTTG+TGG | + | chr5_3:8965817-8965836 | None:intergenic | 15.0% |
| !!! | CCTTAACTTTTTTTATTTAA+GGG | + | chr5_3:8966688-8966707 | None:intergenic | 15.0% |
| !! | CCTTAAATAAAAAAAGTTAA+GGG | - | chr5_3:8966686-8966705 | Msa0796920:intron | 15.0% |
| !!! | TAATGGAATATTTCTATTTT+TGG | - | chr5_3:8966826-8966845 | Msa0796920:intron | 15.0% |
| !! | TTCAAATATTTACTTTACAT+GGG | - | chr5_3:8967367-8967386 | Msa0796920:intron | 15.0% |
| !!! | ATAACCATATTAATTTTTAG+AGG | + | chr5_3:8968125-8968144 | None:intergenic | 15.0% |
| !! | AACATAACTTATTACTAAAA+AGG | - | chr5_3:8968184-8968203 | Msa0796920:intron | 15.0% |
| !!! | CTATACTTTTATAAATATCA+GGG | + | chr5_3:8968346-8968365 | None:intergenic | 15.0% |
| !!! | ACTATACTTTTATAAATATC+AGG | + | chr5_3:8968347-8968366 | None:intergenic | 15.0% |
| !!! | TTATAAGTTTTAAGATTCAA+TGG | + | chr5_3:8968440-8968459 | None:intergenic | 15.0% |
| !! | CTACTCTATAAATATATATA+TGG | - | chr5_3:8968642-8968661 | Msa0796920:intron | 15.0% |
| !!! | TTTGTGAATTTAAAATTTAG+TGG | + | chr5_3:8968718-8968737 | None:intergenic | 15.0% |
| !!! | ATTTTAAATTCACAAATCAA+TGG | - | chr5_3:8968722-8968741 | Msa0796920:intron | 15.0% |
| !! | AGAAATCCAAAATTATTATT+CGG | - | chr5_3:8968993-8969012 | Msa0796920:intron | 15.0% |
| !!! | TGATAGATAAATCAATTTTA+AGG | - | chr5_3:8970321-8970340 | Msa0796920:intron | 15.0% |
| !!! | TACACTATTATAATCAATTT+TGG | - | chr5_3:8970724-8970743 | Msa0796920:intron | 15.0% |
| !!! | GTTTTATTACAGTTTAATGA+AGG | - | chr5_3:8964545-8964564 | Msa0796920:CDS | 20.0% |
| !!! | TGTTAATAAACTTCACTTTT+TGG | - | chr5_3:8965012-8965031 | Msa0796920:intron | 20.0% |
| !!! | GTTAATAAACTTCACTTTTT+GGG | - | chr5_3:8965013-8965032 | Msa0796920:intron | 20.0% |
| !!! | TTAATAAACTTCACTTTTTG+GGG | - | chr5_3:8965014-8965033 | Msa0796920:intron | 20.0% |
| !! | AAATTGAATTGAACTAACTT+TGG | - | chr5_3:8965925-8965944 | Msa0796920:intron | 20.0% |
| !! | TTATAAACTTACATGTTGTT+TGG | - | chr5_3:8966223-8966242 | Msa0796920:intron | 20.0% |
| !! | TTATAAACTTACATGTTGTT+TGG | - | chr5_3:8966223-8966242 | Msa0796920:intron | 20.0% |
| !!! | CAATGCAAAATTATCATTTT+TGG | - | chr5_3:8966635-8966654 | Msa0796920:intron | 20.0% |
| !! | CCCTTAAATAAAAAAAGTTA+AGG | - | chr5_3:8966685-8966704 | Msa0796920:intron | 20.0% |
| !!! | CCCTTAACTTTTTTTATTTA+AGG | + | chr5_3:8966689-8966708 | None:intergenic | 20.0% |
| !!! | CAAATGTAGAAACTTTTTAT+TGG | - | chr5_3:8966748-8966767 | Msa0796920:intron | 20.0% |
| !!! | CATAATCATATTTAACTTTC+GGG | + | chr5_3:8966891-8966910 | None:intergenic | 20.0% |
| !!! | CCATAATCATATTTAACTTT+CGG | + | chr5_3:8966892-8966911 | None:intergenic | 20.0% |
| !! | TGAAAAGAAAAGCAAAAAAT+AGG | + | chr5_3:8966974-8966993 | None:intergenic | 20.0% |
| !!! | TATGTTTACATTTTTAGACA+TGG | - | chr5_3:8967332-8967351 | Msa0796920:intron | 20.0% |
| !!! | ATGTTTACATTTTTAGACAT+GGG | - | chr5_3:8967333-8967352 | Msa0796920:intron | 20.0% |
| !! | CTTCAAATATTTACTTTACA+TGG | - | chr5_3:8967366-8967385 | Msa0796920:intron | 20.0% |
| !! | ATCCTAGAAAGAATAAAATT+GGG | + | chr5_3:8967531-8967550 | None:intergenic | 20.0% |
| !! | AATCCTAGAAAGAATAAAAT+TGG | + | chr5_3:8967532-8967551 | None:intergenic | 20.0% |
| !!! | ATTTTATTAAGGTTGATCAT+CGG | + | chr5_3:8967558-8967577 | None:intergenic | 20.0% |
| !!! | ACAGTTTTATGAATCTAAAA+TGG | - | chr5_3:8967932-8967951 | Msa0796920:intron | 20.0% |
| !! | TTAAAACAGGATATTTATCA+GGG | - | chr5_3:8968034-8968053 | Msa0796920:intron | 20.0% |
| !!! | TGATATTTGTACAACTATTT+TGG | - | chr5_3:8968470-8968489 | Msa0796920:intron | 20.0% |
| !!! | TATTTTTTAATGTTTAGTCG+AGG | + | chr5_3:8968924-8968943 | None:intergenic | 20.0% |
| !!! | ATTGTTCCGAATAATAATTT+TGG | + | chr5_3:8969002-8969021 | None:intergenic | 20.0% |
| !!! | ATTGAATAAATGACTTGTTT+TGG | + | chr5_3:8969172-8969191 | None:intergenic | 20.0% |
| !!! | AGAAGTTTTTTATATCTTGT+AGG | + | chr5_3:8969356-8969375 | None:intergenic | 20.0% |
| !!! | GTTTTATTACAGTTTAATGA+AGG | - | chr5_3:8964545-8964564 | Msa0796920:CDS | 20.0% |
| !! | AAAAACTTACCATAAATAAC+AGG | + | chr5_3:8969915-8969934 | None:intergenic | 20.0% |
| !!! | GTTATTTATGGTAAGTTTTT+TGG | - | chr5_3:8969915-8969934 | Msa0796920:intron | 20.0% |
| !!! | AGTGTAATTTTGTGTATTTT+AGG | - | chr5_3:8970290-8970309 | Msa0796920:intron | 20.0% |
| !!! | AATTTTAAGGAACCAATTTT+AGG | - | chr5_3:8970334-8970353 | Msa0796920:intron | 20.0% |
| !!! | TTTTTGCTTATAATAGTGAT+TGG | - | chr5_3:8970445-8970464 | Msa0796920:intron | 20.0% |
| !! | GATAACCAATTTACTAAAAT+TGG | + | chr5_3:8970820-8970839 | None:intergenic | 20.0% |
| !!! | ATTCATCAATTGACTTATTT+AGG | + | chr5_3:8970977-8970996 | None:intergenic | 20.0% |
| !!! | ATATAAAGCTTTATGTTCAT+GGG | + | chr5_3:8971278-8971297 | None:intergenic | 20.0% |
| !!! | AATATAAAGCTTTATGTTCA+TGG | + | chr5_3:8971279-8971298 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTGTGCTTTTTT+TGG | + | chr5_3:8964304-8964323 | None:intergenic | 25.0% |
| ! | CATACTAGTAGTATATAACA+TGG | - | chr5_3:8964492-8964511 | Msa0796920:exon | 25.0% |
| ! | AAATGACAATCTTCTATGAT+GGG | - | chr5_3:8964601-8964620 | Msa0796920:CDS | 25.0% |
| !! | TTGGATATTTTATGTTTGAG+AGG | - | chr5_3:8964813-8964832 | Msa0796920:intron | 25.0% |
| !! | TGGATATTTTATGTTTGAGA+GGG | - | chr5_3:8964814-8964833 | Msa0796920:intron | 25.0% |
| ! | AAACATGTCAAAATCAATCT+TGG | + | chr5_3:8965106-8965125 | None:intergenic | 25.0% |
| ! | AATGTACAGTGATTTATGTT+TGG | + | chr5_3:8965247-8965266 | None:intergenic | 25.0% |
| !! | ATTGGTTTATTAATGCTTCT+TGG | + | chr5_3:8965429-8965448 | None:intergenic | 25.0% |
| ! | AAACAGTTAAAGTAACACAT+GGG | + | chr5_3:8965526-8965545 | None:intergenic | 25.0% |
| ! | AAAACAGTTAAAGTAACACA+TGG | + | chr5_3:8965527-8965546 | None:intergenic | 25.0% |
| !!! | TTTAACTGTTTTTGTTAGCA+CGG | - | chr5_3:8965535-8965554 | Msa0796920:intron | 25.0% |
| !! | ATACATACTTTTGTGAGAAT+AGG | + | chr5_3:8965623-8965642 | None:intergenic | 25.0% |
| ! | ATACATATTTGTGATTGTTG+TGG | - | chr5_3:8965641-8965660 | Msa0796920:intron | 25.0% |
| !!! | ACAAGTAGTACACTTTTTTT+AGG | + | chr5_3:8965713-8965732 | None:intergenic | 25.0% |
| !!! | TATAAAGTTTTATGTTGTGG+AGG | + | chr5_3:8965814-8965833 | None:intergenic | 25.0% |
| ! | ATTCAATAAGGAAAATCGAA+TGG | - | chr5_3:8965869-8965888 | Msa0796920:CDS | 25.0% |
| ! | GAATGGAAAGAAAAAACAAA+GGG | - | chr5_3:8965886-8965905 | Msa0796920:CDS | 25.0% |
| !!! | TATTTTTTGAGGATAGTTTC+AGG | - | chr5_3:8966448-8966467 | Msa0796920:intron | 25.0% |
| ! | GTTGAATGCACAAATATTAA+TGG | - | chr5_3:8966809-8966828 | Msa0796920:intron | 25.0% |
| ! | CCGAAAGTTAAATATGATTA+TGG | - | chr5_3:8966889-8966908 | Msa0796920:intron | 25.0% |
| ! | ATGATGTGTCAAATAGATAA+TGG | + | chr5_3:8967213-8967232 | None:intergenic | 25.0% |
| ! | TTATCTATTTGACACATCAT+CGG | - | chr5_3:8967213-8967232 | Msa0796920:intron | 25.0% |
| ! | CAAAATAAATTACTACCTCA+AGG | + | chr5_3:8967264-8967283 | None:intergenic | 25.0% |
| ! | AGAAAGAATAAAATTGGGTT+TGG | + | chr5_3:8967526-8967545 | None:intergenic | 25.0% |
| !! | AACCCAATTTTATTCTTTCT+AGG | - | chr5_3:8967526-8967545 | Msa0796920:intron | 25.0% |
| ! | GTGAAAATTTAGTGTTAACT+TGG | + | chr5_3:8967685-8967704 | None:intergenic | 25.0% |
| !! | AATTTTCACATAAAAACTCC+CGG | - | chr5_3:8967696-8967715 | Msa0796920:intron | 25.0% |
| !! | TATTAAAGTGTCTATTGCTA+AGG | - | chr5_3:8967751-8967770 | Msa0796920:intron | 25.0% |
| !!! | TTTTATGAATCTAAAATGGC+TGG | - | chr5_3:8967936-8967955 | Msa0796920:intron | 25.0% |
| !! | TTTATGAATCTAAAATGGCT+GGG | - | chr5_3:8967937-8967956 | Msa0796920:intron | 25.0% |
| !!! | ATTTTTCTTGCTTTTCTCAT+AGG | + | chr5_3:8967965-8967984 | None:intergenic | 25.0% |
| ! | CTTAAAACAGGATATTTATC+AGG | - | chr5_3:8968033-8968052 | Msa0796920:intron | 25.0% |
| !!! | TTTTTTCACCCATAATTTTG+AGG | + | chr5_3:8968099-8968118 | None:intergenic | 25.0% |
| ! | CAAAATTATGGGTGAAAAAA+AGG | - | chr5_3:8968099-8968118 | Msa0796920:intron | 25.0% |
| !! | AAGGCCTCTAAAAATTAATA+TGG | - | chr5_3:8968118-8968137 | Msa0796920:intron | 25.0% |
| !!! | CTAAAGCAAAAATTTTAACG+TGG | + | chr5_3:8968301-8968320 | None:intergenic | 25.0% |
| !! | CACGTTAAAATTTTTGCTTT+AGG | - | chr5_3:8968299-8968318 | Msa0796920:intron | 25.0% |
| ! | GGTAAATAGTATAGATTTGT+TGG | + | chr5_3:8968389-8968408 | None:intergenic | 25.0% |
| !! | TCAATGGATATGATTTTGTA+AGG | + | chr5_3:8968424-8968443 | None:intergenic | 25.0% |
| ! | AAAACAATAGAGAGAGAAAA+AGG | + | chr5_3:8968554-8968573 | None:intergenic | 25.0% |
| ! | TCTTAAAAGTTGTACCAAAA+TGG | - | chr5_3:8968605-8968624 | Msa0796920:intron | 25.0% |
| !!! | TGATATTTTGACAACCATTT+TGG | + | chr5_3:8968622-8968641 | None:intergenic | 25.0% |
| ! | ATCAATGGTTGCAAATAATA+TGG | - | chr5_3:8968737-8968756 | Msa0796920:intron | 25.0% |
| ! | TTCATCTCAAAATATCTCTT+GGG | + | chr5_3:8969062-8969081 | None:intergenic | 25.0% |
| ! | TTTCATCTCAAAATATCTCT+TGG | + | chr5_3:8969063-8969082 | None:intergenic | 25.0% |
| !!! | AGAGATATTTTGAGATGAAA+AGG | - | chr5_3:8969063-8969082 | Msa0796920:intron | 25.0% |
| ! | ATAAATAACACATGCTGATA+TGG | - | chr5_3:8969134-8969153 | Msa0796920:intron | 25.0% |
| ! | TAAATAACACATGCTGATAT+GGG | - | chr5_3:8969135-8969154 | Msa0796920:intron | 25.0% |
| !!! | AAATGACTTGTTTTGGTTTT+TGG | + | chr5_3:8969165-8969184 | None:intergenic | 25.0% |
| ! | ATGGAATAAATAGTTGAAGA+AGG | + | chr5_3:8969400-8969419 | None:intergenic | 25.0% |
| ! | CATACTAGTAGTATATAACA+TGG | - | chr5_3:8964492-8964511 | Msa0796920:exon | 25.0% |
| ! | AAATGACAATCTTCTATGAT+GGG | - | chr5_3:8964601-8964620 | Msa0796920:CDS | 25.0% |
| ! | TTGGATATATTATGTTTGAG+AGG | - | chr5_3:8969934-8969953 | Msa0796920:intron | 25.0% |
| ! | TGGATATATTATGTTTGAGA+GGG | - | chr5_3:8969935-8969954 | Msa0796920:intron | 25.0% |
| ! | GTTACAAAAATTGATTGAAC+TGG | - | chr5_3:8970189-8970208 | Msa0796920:intron | 25.0% |
| ! | TTGCGTTTATATAATAGTGA+CGG | + | chr5_3:8970368-8970387 | None:intergenic | 25.0% |
| !! | ATTAATTTTGCTTCCAGAAA+CGG | + | chr5_3:8970642-8970661 | None:intergenic | 25.0% |
| ! | ATCCTCTCAAAACTAATATA+TGG | - | chr5_3:8970837-8970856 | Msa0796920:CDS | 25.0% |
| !!! | GTACACATATTTTTGAGTAT+AGG | + | chr5_3:8971088-8971107 | None:intergenic | 25.0% |
| ! | GTACATATTAGTTAATGTTG+AGG | - | chr5_3:8971104-8971123 | Msa0796920:intron | 25.0% |
| !! | TATAAAGCTTTATGTTCATG+GGG | + | chr5_3:8971277-8971296 | None:intergenic | 25.0% |
| !!! | GTTTTGTGCTTTTTTTGGTA+TGG | + | chr5_3:8964299-8964318 | None:intergenic | 30.0% |
| ! | CTACAAGAGATTCCTATTTT+GGG | - | chr5_3:8964381-8964400 | Msa0796920:three_prime_UTR | 30.0% |
| AAAAAGAACATGTATGTACC+TGG | + | chr5_3:8964412-8964431 | None:intergenic | 30.0% | |
| AATGAAGGCTAATGTTAAGA+AGG | - | chr5_3:8964560-8964579 | Msa0796920:CDS | 30.0% | |
| CAAATGACAATCTTCTATGA+TGG | - | chr5_3:8964600-8964619 | Msa0796920:CDS | 30.0% | |
| ! | AGTACTAGTAATTCCTTTTG+TGG | + | chr5_3:8964685-8964704 | None:intergenic | 30.0% |
| ! | AGTAAGCATAGTTGTTATTG+TGG | + | chr5_3:8964716-8964735 | None:intergenic | 30.0% |
| CCATAAATAACAGGTATAGA+TGG | + | chr5_3:8964783-8964802 | None:intergenic | 30.0% | |
| ! | CCATCTATACCTGTTATTTA+TGG | - | chr5_3:8964780-8964799 | Msa0796920:intron | 30.0% |
| AATCTTGGATTATCCAAAAG+TGG | + | chr5_3:8965091-8965110 | None:intergenic | 30.0% | |
| CAAAATCAATTCAACTGATG+CGG | + | chr5_3:8965133-8965152 | None:intergenic | 30.0% | |
| !! | AATTGATTTTGCCTACAGAA+TGG | - | chr5_3:8965142-8965161 | Msa0796920:intron | 30.0% |
| ACATTCAACTCAATCACTTA+AGG | - | chr5_3:8965262-8965281 | Msa0796920:intron | 30.0% | |
| ACTATTTATTTGGGTCCATT+TGG | - | chr5_3:8965744-8965763 | Msa0796920:CDS | 30.0% | |
| ! | GGACATTTTCTATAACCAAA+TGG | + | chr5_3:8965762-8965781 | None:intergenic | 30.0% |
| TCGAAAAAAGAAAGACATTG+AGG | + | chr5_3:8965783-8965802 | None:intergenic | 30.0% | |
| ATATTTCCACTCTCATAACT+AGG | - | chr5_3:8965831-8965850 | Msa0796920:CDS | 30.0% | |
| CGAATGGAAAGAAAAAACAA+AGG | - | chr5_3:8965885-8965904 | Msa0796920:CDS | 30.0% | |
| AACAAAGGGAATTGAAACTT+TGG | - | chr5_3:8965900-8965919 | Msa0796920:intron | 30.0% | |
| GAACTAACTTTGGTTATAGT+TGG | - | chr5_3:8965935-8965954 | Msa0796920:intron | 30.0% | |
| TTATAGTTGGTCAGGATATT+CGG | - | chr5_3:8965948-8965967 | Msa0796920:intron | 30.0% | |
| ATAAAATTATTTCCGTTGCC+AGG | + | chr5_3:8966002-8966021 | None:intergenic | 30.0% | |
| AGAAAAATTATTTCCGTTGC+CGG | + | chr5_3:8966099-8966118 | None:intergenic | 30.0% | |
| AGAAAAATTATTTCCGTTGC+CGG | + | chr5_3:8966099-8966118 | None:intergenic | 30.0% | |
| AGAAAAATTATTTCCGTTGC+CGG | + | chr5_3:8966099-8966118 | None:intergenic | 30.0% | |
| GAAATGAAAAGAAAGTTGAG+AGG | - | chr5_3:8966378-8966397 | Msa0796920:intron | 30.0% | |
| AAGTTGAGAGGAAATGAAAA+CGG | - | chr5_3:8966390-8966409 | Msa0796920:intron | 30.0% | |
| TATCTATTTGACACATCATC+GGG | - | chr5_3:8967214-8967233 | Msa0796920:intron | 30.0% | |
| ATAAATTACTACCTCAAGGA+GGG | + | chr5_3:8967260-8967279 | None:intergenic | 30.0% | |
| AATAAATTACTACCTCAAGG+AGG | + | chr5_3:8967261-8967280 | None:intergenic | 30.0% | |
| ! | TTGGGTTTGGTTTAACTTAA+GGG | + | chr5_3:8967513-8967532 | None:intergenic | 30.0% |
| ! | ATTGGGTTTGGTTTAACTTA+AGG | + | chr5_3:8967514-8967533 | None:intergenic | 30.0% |
| AATATTAACATAGTCGCCAA+CGG | - | chr5_3:8967575-8967594 | Msa0796920:intron | 30.0% | |
| AAATAATACAGTATCACCGT+TGG | + | chr5_3:8967594-8967613 | None:intergenic | 30.0% | |
| TAAGTTAAATCGCTCAAACT+AGG | - | chr5_3:8967627-8967646 | Msa0796920:intron | 30.0% | |
| ! | ATTTTCACATAAAAACTCCC+GGG | - | chr5_3:8967697-8967716 | Msa0796920:intron | 30.0% |
| TGTATCATCAATGAGAGATT+AGG | + | chr5_3:8967876-8967895 | None:intergenic | 30.0% | |
| ! | ATCTCTCATTGATGATACAA+AGG | - | chr5_3:8967877-8967896 | Msa0796920:intron | 30.0% |
| !!! | AGATCTATACGTGCTATTTT+TGG | + | chr5_3:8967994-8968013 | None:intergenic | 30.0% |
| AGAAAGAATGAGCTTAAAAC+AGG | - | chr5_3:8968021-8968040 | Msa0796920:intron | 30.0% | |
| !! | AAAAAGGCATCAATTACTCT+TGG | - | chr5_3:8968200-8968219 | Msa0796920:intron | 30.0% |
| ! | ACTTTTATAAATATCAGGGC+CGG | + | chr5_3:8968342-8968361 | None:intergenic | 30.0% |
| AAATAATATGGACTTGTGCA+TGG | - | chr5_3:8968749-8968768 | Msa0796920:intron | 30.0% | |
| AATAATATGGACTTGTGCAT+GGG | - | chr5_3:8968750-8968769 | Msa0796920:intron | 30.0% | |
| ! | AAGAAGGAAGGTAGTTTTTA+GGG | + | chr5_3:8968800-8968819 | None:intergenic | 30.0% |
| ! | TAAGAAGGAAGGTAGTTTTT+AGG | + | chr5_3:8968801-8968820 | None:intergenic | 30.0% |
| !! | TAGGCAACAATTCTAGAATA+TGG | - | chr5_3:8968877-8968896 | Msa0796920:intron | 30.0% |
| !! | AGGCAACAATTCTAGAATAT+GGG | - | chr5_3:8968878-8968897 | Msa0796920:intron | 30.0% |
| TCATCTCAAAATATCTCTTG+GGG | + | chr5_3:8969061-8969080 | None:intergenic | 30.0% | |
| ! | TTTGAGATGAAAAGGAAAGA+AGG | - | chr5_3:8969071-8969090 | Msa0796920:intron | 30.0% |
| TTGAGATGAAAAGGAAAGAA+GGG | - | chr5_3:8969072-8969091 | Msa0796920:intron | 30.0% | |
| !! | TTTTATTTGCCTAGATCACT+TGG | + | chr5_3:8969115-8969134 | None:intergenic | 30.0% |
| TACTAGTTATTAAGAACGTG+TGG | + | chr5_3:8969331-8969350 | None:intergenic | 30.0% | |
| !!! | GATTCATGCTTTTTTTGGTA+TGG | + | chr5_3:8969419-8969438 | None:intergenic | 30.0% |
| !!! | GTGATGATTCATGCTTTTTT+TGG | + | chr5_3:8969424-8969443 | None:intergenic | 30.0% |
| ! | CTACAAGAGATTCCTATTTT+GGG | - | chr5_3:8964381-8964400 | Msa0796920:three_prime_UTR | 30.0% |
| AAAAAGAACATGTATGTACC+TGG | + | chr5_3:8964412-8964431 | None:intergenic | 30.0% | |
| AATGAAGGCTAATGTTAAGA+AGG | - | chr5_3:8964560-8964579 | Msa0796920:CDS | 30.0% | |
| CAAATGACAATCTTCTATGA+TGG | - | chr5_3:8964600-8964619 | Msa0796920:CDS | 30.0% | |
| ! | TGAAGTACTAGTAATTCCTT+TGG | + | chr5_3:8964688-8964707 | None:intergenic | 30.0% |
| ! | TAGTCTTGAAGAGAATTGTT+GGG | + | chr5_3:8969873-8969892 | None:intergenic | 30.0% |
| CCATAAATAACAGGTATAGA+TGG | + | chr5_3:8964783-8964802 | None:intergenic | 30.0% | |
| ! | CCATCTATACCTGTTATTTA+TGG | - | chr5_3:8964780-8964799 | Msa0796920:intron | 30.0% |
| ATTCAGATTTACCAATGACT+AGG | - | chr5_3:8970021-8970040 | Msa0796920:intron | 30.0% | |
| ATATTTGATTGAGAGAGATC+TGG | + | chr5_3:8970097-8970116 | None:intergenic | 30.0% | |
| !!! | GTCAATAGACTTCACTTTTT+AGG | - | chr5_3:8970129-8970148 | Msa0796920:intron | 30.0% |
| AACACACTACTTAACAATTG+AGG | + | chr5_3:8970159-8970178 | None:intergenic | 30.0% | |
| AAGTAGTGTGTTTGATTCTA+CGG | - | chr5_3:8970167-8970186 | Msa0796920:intron | 30.0% | |
| ! | GTGATTTTGCTAAAAGTGAA+TGG | - | chr5_3:8970222-8970241 | Msa0796920:intron | 30.0% |
| ! | TTTATATAATAGTGACGGGA+GGG | + | chr5_3:8970363-8970382 | None:intergenic | 30.0% |
| TGCGTTTATATAATAGTGAC+GGG | + | chr5_3:8970367-8970386 | None:intergenic | 30.0% | |
| TTAAAGTGAGAAAGTCATCA+TGG | + | chr5_3:8970556-8970575 | None:intergenic | 30.0% | |
| TGATGACTTTCTCACTTTAA+AGG | - | chr5_3:8970556-8970575 | Msa0796920:intron | 30.0% | |
| !! | AACGGATTGAAGCTATAATT+TGG | + | chr5_3:8970624-8970643 | None:intergenic | 30.0% |
| !! | AGGAGCCAATTTTAGTAAAT+TGG | - | chr5_3:8970812-8970831 | Msa0796920:CDS | 30.0% |
| !!! | AGCCATATATTAGTTTTGAG+AGG | + | chr5_3:8970842-8970861 | None:intergenic | 30.0% |
| CCAAACATCACAATAGAAAA+GGG | + | chr5_3:8970867-8970886 | None:intergenic | 30.0% | |
| TCCAAACATCACAATAGAAA+AGG | + | chr5_3:8970868-8970887 | None:intergenic | 30.0% | |
| GACAAACATATCAGTCAATA+TGG | + | chr5_3:8970896-8970915 | None:intergenic | 30.0% | |
| !! | AACAAGTTCTACTCGTTTTT+GGG | + | chr5_3:8971170-8971189 | None:intergenic | 30.0% |
| ! | TAACAAGTTCTACTCGTTTT+TGG | + | chr5_3:8971171-8971190 | None:intergenic | 30.0% |
| ATTGTTATAGAAGATGTCCT+CGG | - | chr5_3:8971225-8971244 | Msa0796920:CDS | 30.0% | |
| ! | ATAAAGCTTTATGTTCATGG+GGG | + | chr5_3:8971276-8971295 | None:intergenic | 30.0% |
| GGAAGCTGTTGAAAATTCAT+AGG | + | chr5_3:8964351-8964370 | None:intergenic | 35.0% | |
| CCAAAATAGGAATCTCTTGT+AGG | + | chr5_3:8964383-8964402 | None:intergenic | 35.0% | |
| ! | CCTACAAGAGATTCCTATTT+TGG | - | chr5_3:8964380-8964399 | Msa0796920:three_prime_UTR | 35.0% |
| TGAAAAAGCCAAAGACATCA+TGG | - | chr5_3:8964653-8964672 | Msa0796920:intron | 35.0% | |
| ! | ATCATGGACTTTTCCACAAA+AGG | - | chr5_3:8964669-8964688 | Msa0796920:intron | 35.0% |
| ATTCAGATTTACCAATGACG+AGG | - | chr5_3:8964905-8964924 | Msa0796920:intron | 35.0% | |
| !! | TGTAAGTTTGGTTCCACTTT+TGG | - | chr5_3:8965075-8965094 | Msa0796920:intron | 35.0% |
| TCAAGTAGAATCCATTCTGT+AGG | + | chr5_3:8965156-8965175 | None:intergenic | 35.0% | |
| CTTGGATTGCTTGTTTGATA+TGG | + | chr5_3:8965411-8965430 | None:intergenic | 35.0% | |
| CATGTCATGGATTCATCAAT+TGG | + | chr5_3:8965447-8965466 | None:intergenic | 35.0% | |
| CAATTGATGAATCCATGACA+TGG | - | chr5_3:8965445-8965464 | Msa0796920:intron | 35.0% | |
| CTCAGTCCTACAAAAATAGA+GGG | + | chr5_3:8965599-8965618 | None:intergenic | 35.0% | |
| ACTCAGTCCTACAAAAATAG+AGG | + | chr5_3:8965600-8965619 | None:intergenic | 35.0% | |
| ! | CCATTGTTAAGAGTGTAGTT+CGG | - | chr5_3:8965681-8965700 | Msa0796920:CDS | 35.0% |
| GTTCATGGTTCGATTCAATA+AGG | - | chr5_3:8965857-8965876 | Msa0796920:CDS | 35.0% | |
| AACTTTGGTTATAGTTGGTC+AGG | - | chr5_3:8965940-8965959 | Msa0796920:intron | 35.0% | |
| GAAAAATTATTTCCGTTGCC+GGG | + | chr5_3:8966098-8966117 | None:intergenic | 35.0% | |
| GAAAAATTATTTCCGTTGCC+GGG | + | chr5_3:8966098-8966117 | None:intergenic | 35.0% | |
| GAAAAATTATTTCCGTTGCC+GGG | + | chr5_3:8966098-8966117 | None:intergenic | 35.0% | |
| TAAAGGGAAATGCTAAAGAG+TGG | - | chr5_3:8966513-8966532 | Msa0796920:intron | 35.0% | |
| ATTGCTTAACATGTACCCTT+AGG | - | chr5_3:8966849-8966868 | Msa0796920:intron | 35.0% | |
| TTGCTTAACATGTACCCTTA+GGG | - | chr5_3:8966850-8966869 | Msa0796920:intron | 35.0% | |
| !!! | TGCACGTTTTTTTCCTAAGA+AGG | - | chr5_3:8967427-8967446 | Msa0796920:intron | 35.0% |
| !!! | GCACGTTTTTTTCCTAAGAA+GGG | - | chr5_3:8967428-8967447 | Msa0796920:intron | 35.0% |
| !!! | TAGTTTTAAGTCGTAAACCC+GGG | + | chr5_3:8967717-8967736 | None:intergenic | 35.0% |
| !!! | CTAGTTTTAAGTCGTAAACC+CGG | + | chr5_3:8967718-8967737 | None:intergenic | 35.0% |
| GCAAATCAAATCAAAGTCTC+TGG | + | chr5_3:8967836-8967855 | None:intergenic | 35.0% | |
| ! | GCTTTAGGCCTCAAAATTAT+GGG | - | chr5_3:8968088-8968107 | Msa0796920:intron | 35.0% |
| TTTAGGCCTCTTAATCTCTA+GGG | - | chr5_3:8968316-8968335 | Msa0796920:intron | 35.0% | |
| TTTGTAAGGACAACACAACA+TGG | + | chr5_3:8968410-8968429 | None:intergenic | 35.0% | |
| ! | TTGTTGTTCTCTCTTCTCAT+TGG | + | chr5_3:8968580-8968599 | None:intergenic | 35.0% |
| AATCATGGGATTAAGAAGGA+AGG | + | chr5_3:8968812-8968831 | None:intergenic | 35.0% | |
| ATATGGGCAACCAAGTTATT+AGG | - | chr5_3:8968894-8968913 | Msa0796920:intron | 35.0% | |
| TGCAACCAGTAAAATGGATA+TGG | - | chr5_3:8969209-8969228 | Msa0796920:intron | 35.0% | |
| GCAACCAGTAAAATGGATAT+GGG | - | chr5_3:8969210-8969229 | Msa0796920:intron | 35.0% | |
| !! | TTGTTTGAGACAGAAGTGTT+GGG | + | chr5_3:8969245-8969264 | None:intergenic | 35.0% |
| ! | TTTGTTTGAGACAGAAGTGT+TGG | + | chr5_3:8969246-8969265 | None:intergenic | 35.0% |
| GGAAGCTGTTGAAAATTCAT+AGG | + | chr5_3:8964351-8964370 | None:intergenic | 35.0% | |
| CCAAAATAGGAATCTCTTGT+AGG | + | chr5_3:8964383-8964402 | None:intergenic | 35.0% | |
| ! | CCTACAAGAGATTCCTATTT+TGG | - | chr5_3:8964380-8964399 | Msa0796920:three_prime_UTR | 35.0% |
| TGATAAAGCCAAAGACATCA+TGG | - | chr5_3:8969758-8969777 | Msa0796920:intron | 35.0% | |
| AGTACTAGTAATTCCTTTGG+TGG | + | chr5_3:8969790-8969809 | None:intergenic | 35.0% | |
| ! | AGCAAGCATAGTTGTTATTG+TGG | + | chr5_3:8969827-8969846 | None:intergenic | 35.0% |
| ! | GTAGTCTTGAAGAGAATTGT+TGG | + | chr5_3:8969874-8969893 | None:intergenic | 35.0% |
| GGATTGAGATATAGTGACTT+TGG | - | chr5_3:8970243-8970262 | Msa0796920:intron | 35.0% | |
| AGATATAGTGACTTTGGTGA+TGG | - | chr5_3:8970249-8970268 | Msa0796920:intron | 35.0% | |
| ! | GATATAGTGACTTTGGTGAT+GGG | - | chr5_3:8970250-8970269 | Msa0796920:intron | 35.0% |
| ! | GTTTATATAATAGTGACGGG+AGG | + | chr5_3:8970364-8970383 | None:intergenic | 35.0% |
| ! | ACTTTCTCACTTTAAAGGCA+GGG | - | chr5_3:8970561-8970580 | Msa0796920:intron | 35.0% |
| ! | TGGAGTTTTTGTCTCTACAT+TGG | + | chr5_3:8970604-8970623 | None:intergenic | 35.0% |
| TTATAGCTTCAATCCGTTTC+TGG | - | chr5_3:8970626-8970645 | Msa0796920:CDS | 35.0% | |
| GATACCATGAACAAAAGTGA+AGG | - | chr5_3:8970792-8970811 | Msa0796920:CDS | 35.0% | |
| ! | CCCTTTTCTATTGTGATGTT+TGG | - | chr5_3:8970864-8970883 | Msa0796920:CDS | 35.0% |
| GCTGGATTACTTGTTTGATA+AGG | + | chr5_3:8970948-8970967 | None:intergenic | 35.0% | |
| CAATTGATGAATCCATGTCA+TGG | - | chr5_3:8970985-8971004 | Msa0796920:CDS | 35.0% | |
| CTACATTCAGATTTGTGTTG+CGG | + | chr5_3:8971032-8971051 | None:intergenic | 35.0% | |
| CTACAAAAATAACACAGAGG+TGG | + | chr5_3:8971057-8971076 | None:intergenic | 35.0% | |
| !!! | CACCTCTGTGTTATTTTTGT+AGG | - | chr5_3:8971055-8971074 | Msa0796920:intron | 35.0% |
| GTCCTACAAAAATAACACAG+AGG | + | chr5_3:8971060-8971079 | None:intergenic | 35.0% | |
| ! | TGTACCATTAAGTGTTGTTC+TGG | - | chr5_3:8971139-8971158 | Msa0796920:intron | 35.0% |
| TCAACCAGAACAACACTTAA+TGG | + | chr5_3:8971146-8971165 | None:intergenic | 35.0% | |
| ATCTCTTGTAGGAAGAGATG+AGG | + | chr5_3:8964372-8964391 | None:intergenic | 40.0% | |
| !! | TTCCTATTTTGGGAAACTCC+AGG | - | chr5_3:8964391-8964410 | Msa0796920:three_prime_UTR | 40.0% |
| TACCTGGAGTTTCCCAAAAT+AGG | + | chr5_3:8964396-8964415 | None:intergenic | 40.0% | |
| GGCTAATGTTAAGAAGGAAG+AGG | - | chr5_3:8964566-8964585 | Msa0796920:CDS | 40.0% | |
| !!! | ATGTCTTTGGCTTTTTCAGC+TGG | + | chr5_3:8964651-8964670 | None:intergenic | 40.0% |
| GGAAAAGTCCATGATGTCTT+TGG | + | chr5_3:8964664-8964683 | None:intergenic | 40.0% | |
| !! | TTCATCGGTTCTTGGAGAAA+AGG | - | chr5_3:8964938-8964957 | Msa0796920:intron | 40.0% |
| TCTTGGAGAAAAGGAAGGAT+AGG | - | chr5_3:8964947-8964966 | Msa0796920:intron | 40.0% | |
| TTGATTGAGAGAGATCTTGC+TGG | + | chr5_3:8964977-8964996 | None:intergenic | 40.0% | |
| GATTTGTGTTGTGGTGATTG+TGG | + | chr5_3:8965483-8965502 | None:intergenic | 40.0% | |
| CTACACTCAGATTTGTGTTG+TGG | + | chr5_3:8965492-8965511 | None:intergenic | 40.0% | |
| TTAAAGTAACACATGGGTGG+AGG | + | chr5_3:8965520-8965539 | None:intergenic | 40.0% | |
| CAGTTAAAGTAACACATGGG+TGG | + | chr5_3:8965523-8965542 | None:intergenic | 40.0% | |
| !! | GGTGTTGTTTCTGTATGAAC+TGG | - | chr5_3:8965556-8965575 | Msa0796920:intron | 40.0% |
| AACTGGATCAATCAGCTGTA+TGG | - | chr5_3:8965573-8965592 | Msa0796920:intron | 40.0% | |
| !!! | GTATGGCCCTCTATTTTTGT+AGG | - | chr5_3:8965590-8965609 | Msa0796920:intron | 40.0% |
| CCGAACTACACTCTTAACAA+TGG | + | chr5_3:8965684-8965703 | None:intergenic | 40.0% | |
| TTCCACTCTCATAACTAGGA+TGG | - | chr5_3:8965835-8965854 | Msa0796920:CDS | 40.0% | |
| AACCATCCTAGTTATGAGAG+TGG | + | chr5_3:8965840-8965859 | None:intergenic | 40.0% | |
| CTCATAACTAGGATGGTTCA+TGG | - | chr5_3:8965842-8965861 | Msa0796920:CDS | 40.0% | |
| AAATCCTCGAGCATCTTTGT+GGG | + | chr5_3:8966420-8966439 | None:intergenic | 40.0% | |
| AAAATCCTCGAGCATCTTTG+TGG | + | chr5_3:8966421-8966440 | None:intergenic | 40.0% | |
| AAGGGTTATGCTAAAGACAC+TGG | + | chr5_3:8966670-8966689 | None:intergenic | 40.0% | |
| !! | AATGTTAACTTGTGCCCTCA+AGG | - | chr5_3:8966710-8966729 | Msa0796920:intron | 40.0% |
| !! | CTCATTAACTTGTGCCTTGA+GGG | + | chr5_3:8966727-8966746 | None:intergenic | 40.0% |
| !! | ACTCATTAACTTGTGCCTTG+AGG | + | chr5_3:8966728-8966747 | None:intergenic | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | + | chr5_3:8966867-8966886 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | + | chr5_3:8966868-8966887 | None:intergenic | 40.0% |
| !! | ACATTTTTAGACATGGGCTC+TGG | - | chr5_3:8967339-8967358 | Msa0796920:intron | 40.0% |
| !! | CATTTTTAGACATGGGCTCT+GGG | - | chr5_3:8967340-8967359 | Msa0796920:intron | 40.0% |
| TTACATGGGAGCTTAATCCA+CGG | - | chr5_3:8967381-8967400 | Msa0796920:intron | 40.0% | |
| GGAAAAAAACGTGCAACATG+TGG | + | chr5_3:8967422-8967441 | None:intergenic | 40.0% | |
| AACAGGATATTTATCAGGGC+CGG | - | chr5_3:8968038-8968057 | Msa0796920:intron | 40.0% | |
| !! | GGCTTTAGGCCTCAAAATTA+TGG | - | chr5_3:8968087-8968106 | Msa0796920:intron | 40.0% |
| CTTTAGGCCTCTTAATCTCT+AGG | - | chr5_3:8968315-8968334 | Msa0796920:intron | 40.0% | |
| GGTCAATCATGGGATTAAGA+AGG | + | chr5_3:8968816-8968835 | None:intergenic | 40.0% | |
| AGATTGTCGAGGTCAATCAT+GGG | + | chr5_3:8968826-8968845 | None:intergenic | 40.0% | |
| ! | TTTTACAGTGCAGATTGTCG+AGG | + | chr5_3:8968837-8968856 | None:intergenic | 40.0% |
| TTGCAGCTTGCACAATGTAT+AGG | - | chr5_3:8968858-8968877 | Msa0796920:intron | 40.0% | |
| TCGAGGTACACCTAATAACT+TGG | + | chr5_3:8968907-8968926 | None:intergenic | 40.0% | |
| GATCACTTGGACAAGGATTA+GGG | + | chr5_3:8969102-8969121 | None:intergenic | 40.0% | |
| AGATCACTTGGACAAGGATT+AGG | + | chr5_3:8969103-8969122 | None:intergenic | 40.0% | |
| AATCCTTGTCCAAGTGATCT+AGG | - | chr5_3:8969103-8969122 | Msa0796920:intron | 40.0% | |
| GCAAGTTGCAACCAGTAAAA+TGG | - | chr5_3:8969203-8969222 | Msa0796920:intron | 40.0% | |
| ! | AGGTCCCATATCCATTTTAC+TGG | + | chr5_3:8969217-8969236 | None:intergenic | 40.0% |
| ATCTCTTGTAGGAAGAGATG+AGG | + | chr5_3:8964372-8964391 | None:intergenic | 40.0% | |
| !! | TTCCTATTTTGGGAAACTCC+AGG | - | chr5_3:8964391-8964410 | Msa0796920:three_prime_UTR | 40.0% |
| TACCTGGAGTTTCCCAAAAT+AGG | + | chr5_3:8964396-8964415 | None:intergenic | 40.0% | |
| GGCTAATGTTAAGAAGGAAG+AGG | - | chr5_3:8964566-8964585 | Msa0796920:CDS | 40.0% | |
| !! | ATGTCTTTGGCTTTATCAGC+TGG | + | chr5_3:8969756-8969775 | None:intergenic | 40.0% |
| GGAAAAGTCCATGATGTCTT+TGG | + | chr5_3:8964664-8964683 | None:intergenic | 40.0% | |
| ! | ATCATGGACTTTTCCACCAA+AGG | - | chr5_3:8969774-8969793 | Msa0796920:intron | 40.0% |
| !! | AGGGTGTTTGATTTGTGTCA+TGG | - | chr5_3:8969954-8969973 | Msa0796920:intron | 40.0% |
| AGTGAAGCTTTCCTAGTCAT+TGG | + | chr5_3:8970035-8970054 | None:intergenic | 40.0% | |
| CTAGGAAAGCTTCACTTCAT+CGG | - | chr5_3:8970039-8970058 | Msa0796920:intron | 40.0% | |
| !! | TTCATCGGTTCTTGGAGAAA+AGG | - | chr5_3:8964938-8964957 | Msa0796920:intron | 40.0% |
| TCTTGGAGAAAAGGAAGGAT+AGG | - | chr5_3:8964947-8964966 | Msa0796920:intron | 40.0% | |
| ! | GACTTTCTCACTTTAAAGGC+AGG | - | chr5_3:8970560-8970579 | Msa0796920:intron | 40.0% |
| ! | CACTTTAAAGGCAGGGAATT+TGG | - | chr5_3:8970568-8970587 | Msa0796920:intron | 40.0% |
| GACATGACTCTTTGTATCCT+CGG | + | chr5_3:8970767-8970786 | None:intergenic | 40.0% | |
| TTTCTGCAGAATTGCTGCAA+GGG | - | chr5_3:8970920-8970939 | Msa0796920:CDS | 40.0% | |
| GACTTATTTAGGAATGCTGC+TGG | + | chr5_3:8970966-8970985 | None:intergenic | 40.0% | |
| TCGACATAAGAATGATACCG+AGG | + | chr5_3:8971245-8971264 | None:intergenic | 40.0% | |
| AGTGAAGCTTTCCTCGTCAT+TGG | + | chr5_3:8964919-8964938 | None:intergenic | 45.0% | |
| CGAGGAAAGCTTCACTTCAT+CGG | - | chr5_3:8964923-8964942 | Msa0796920:intron | 45.0% | |
| !! | AGCTTCACTTCATCGGTTCT+TGG | - | chr5_3:8964930-8964949 | Msa0796920:intron | 45.0% |
| TCGGTTCTTGGAGAAAAGGA+AGG | - | chr5_3:8964942-8964961 | Msa0796920:intron | 45.0% | |
| ATCCATGACATGGCTCTCTT+TGG | - | chr5_3:8965455-8965474 | Msa0796920:intron | 45.0% | |
| AAAACCCACAAAGATGCTCG+AGG | - | chr5_3:8966413-8966432 | Msa0796920:intron | 45.0% | |
| GAGGGTCAAGTATCTATCGA+AGG | + | chr5_3:8967242-8967261 | None:intergenic | 45.0% | |
| TAGATACTTGACCCTCCTTG+AGG | - | chr5_3:8967246-8967265 | Msa0796920:intron | 45.0% | |
| TGCAACATGTGGCAAGTTTG+CGG | + | chr5_3:8967411-8967430 | None:intergenic | 45.0% | |
| ! | CTAAGGCATCAACTCTTCCT+GGG | - | chr5_3:8967768-8967787 | Msa0796920:intron | 45.0% |
| ! | TGTTTGCACTTTTGCATCCC+AGG | + | chr5_3:8967788-8967807 | None:intergenic | 45.0% |
| ! | GGGATGCAAAAGTGCAAACA+TGG | - | chr5_3:8967788-8967807 | Msa0796920:intron | 45.0% |
| CAGATTGTCGAGGTCAATCA+TGG | + | chr5_3:8968827-8968846 | None:intergenic | 45.0% | |
| TTGCCTAGATCACTTGGACA+AGG | + | chr5_3:8969109-8969128 | None:intergenic | 45.0% | |
| !! | TGAGACAGAAGTGTTGGGAT+GGG | + | chr5_3:8969240-8969259 | None:intergenic | 45.0% |
| !! | TTGAGACAGAAGTGTTGGGA+TGG | + | chr5_3:8969241-8969260 | None:intergenic | 45.0% |
| !! | AGCTTCACTTCATCGGTTCT+TGG | - | chr5_3:8964930-8964949 | Msa0796920:intron | 45.0% |
| TCGGTTCTTGGAGAAAAGGA+AGG | - | chr5_3:8964942-8964961 | Msa0796920:intron | 45.0% | |
| TTGATTGAGAGAGATCTGGC+AGG | + | chr5_3:8970093-8970112 | None:intergenic | 45.0% | |
| !! | TGTATCCTCGGCTCGATTTT+AGG | + | chr5_3:8970755-8970774 | None:intergenic | 45.0% |
| !! | GGCTCCTTCACTTTTGTTCA+TGG | + | chr5_3:8970799-8970818 | None:intergenic | 45.0% |
| GTTTCTGCAGAATTGCTGCA+AGG | - | chr5_3:8970919-8970938 | Msa0796920:CDS | 45.0% | |
| ATCCATGTCATGGCTATCCT+TGG | - | chr5_3:8970995-8971014 | Msa0796920:CDS | 45.0% | |
| GATTTGTGTTGCGGTGAATG+TGG | + | chr5_3:8971023-8971042 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTATTTATTTTTTG+AGG | - | chr5_3:8966437-8966456 | Msa0796920:intron | 5.0% |
| GCTTGTTTGATATGGTGCCC+TGG | + | chr5_3:8965403-8965422 | None:intergenic | 50.0% | |
| TGCCAAAGAGAGCCATGTCA+TGG | + | chr5_3:8965460-8965479 | None:intergenic | 50.0% | |
| GACTTGAACCCAGGTCTTTC+GGG | + | chr5_3:8965980-8965999 | None:intergenic | 50.0% | |
| GGACTTGAACCCAGGTCTTT+CGG | + | chr5_3:8965981-8966000 | None:intergenic | 50.0% | |
| AAAGACCTGGGTTCAAGTCC+TGG | - | chr5_3:8965981-8966000 | Msa0796920:intron | 50.0% | |
| ACTTGAACCTGGGTCTTTCG+GGG | + | chr5_3:8966272-8966291 | None:intergenic | 50.0% | |
| GACTTGAACCTGGGTCTTTC+GGG | + | chr5_3:8966273-8966292 | None:intergenic | 50.0% | |
| GGACTTGAACCTGGGTCTTT+CGG | + | chr5_3:8966274-8966293 | None:intergenic | 50.0% | |
| AAAGACCCAGGTTCAAGTCC+CGG | - | chr5_3:8966274-8966293 | Msa0796920:intron | 50.0% | |
| GGTGAAATGTGGCCCTTCTT+AGG | + | chr5_3:8967443-8967462 | None:intergenic | 50.0% | |
| ! | GCTAAGGCATCAACTCTTCC+TGG | - | chr5_3:8967767-8967786 | Msa0796920:intron | 50.0% |
| TATTTATCAGGGCCGGCCTA+AGG | - | chr5_3:8968045-8968064 | Msa0796920:intron | 50.0% | |
| ACGGGAGGGAGTCCTAAAAT+TGG | + | chr5_3:8970349-8970368 | None:intergenic | 50.0% | |
| CTCATCCTAAAATCGAGCCG+AGG | - | chr5_3:8970747-8970766 | Msa0796920:intron | 50.0% | |
| TGCCAAGGATAGCCATGACA+TGG | + | chr5_3:8971000-8971019 | None:intergenic | 50.0% | |
| TCGTAGCCAGAATTGCAGCC+AGG | - | chr5_3:8965382-8965401 | Msa0796920:intron | 55.0% | |
| CGTAGCCAGAATTGCAGCCA+GGG | - | chr5_3:8965383-8965402 | Msa0796920:intron | 55.0% | |
| GGATCTCACCCGAAAGACCT+GGG | - | chr5_3:8965969-8965988 | Msa0796920:intron | 55.0% | |
| CTGGGTTCAAGTCCTGGCAA+CGG | - | chr5_3:8965987-8966006 | Msa0796920:intron | 55.0% | |
| ACTTGAACCCGGGTCTTTCG+GGG | + | chr5_3:8966075-8966094 | None:intergenic | 55.0% | |
| GACTTGAACCCGGGTCTTTC+GGG | + | chr5_3:8966076-8966095 | None:intergenic | 55.0% | |
| GGACTTGAACCCGGGTCTTT+CGG | + | chr5_3:8966077-8966096 | None:intergenic | 55.0% | |
| AAAGACCCGGGTTCAAGTCC+CGG | - | chr5_3:8966077-8966096 | Msa0796920:CDS | 55.0% | |
| ACTTGAACCCGGGTCTTTCG+GGG | + | chr5_3:8966075-8966094 | None:intergenic | 55.0% | |
| GACTTGAACCCGGGTCTTTC+GGG | + | chr5_3:8966076-8966095 | None:intergenic | 55.0% | |
| GGACTTGAACCCGGGTCTTT+CGG | + | chr5_3:8966077-8966096 | None:intergenic | 55.0% | |
| AAAGACCCGGGTTCAAGTCC+CGG | - | chr5_3:8966077-8966096 | Msa0796920:CDS | 55.0% | |
| TTGAACCTGGGTCTTTCGGG+GGG | + | chr5_3:8966270-8966289 | None:intergenic | 55.0% | |
| CTTGAACCTGGGTCTTTCGG+GGG | + | chr5_3:8966271-8966290 | None:intergenic | 55.0% | |
| GGCAAGTTTGCGGTATACCG+TGG | + | chr5_3:8967401-8967420 | None:intergenic | 55.0% | |
| ! | GCTTGGGTTGCTTGGTCCTT+AGG | + | chr5_3:8968064-8968083 | None:intergenic | 55.0% |
| AGGACCAAGCAACCCAAGCA+AGG | - | chr5_3:8968065-8968084 | Msa0796920:intron | 55.0% | |
| GGACCAAGCAACCCAAGCAA+GGG | - | chr5_3:8968066-8968085 | Msa0796920:intron | 55.0% | |
| ! | AAGCCCTTGCTTGGGTTGCT+TGG | + | chr5_3:8968072-8968091 | None:intergenic | 55.0% |
| GCAACCCAAGCAAGGGCTTT+AGG | - | chr5_3:8968073-8968092 | Msa0796920:intron | 55.0% | |
| GAGGCCTAAAGCCCTTGCTT+GGG | + | chr5_3:8968080-8968099 | None:intergenic | 55.0% | |
| TGAGGCCTAAAGCCCTTGCT+TGG | + | chr5_3:8968081-8968100 | None:intergenic | 55.0% | |
| !! | GGCCTCTTAATCTCTAGGGC+CGG | - | chr5_3:8968320-8968339 | Msa0796920:intron | 55.0% |
| !! | GACAGAAGTGTTGGGATGGG+AGG | + | chr5_3:8969237-8969256 | None:intergenic | 55.0% |
| ! | TTGCGGTGAATGTGGTGCCA+AGG | + | chr5_3:8971015-8971034 | None:intergenic | 55.0% |
| TGGTGCCCTGGCTGCAATTC+TGG | + | chr5_3:8965391-8965410 | None:intergenic | 60.0% | |
| CGGATCTCACCCGAAAGACC+TGG | - | chr5_3:8965968-8965987 | Msa0796920:intron | 60.0% | |
| CGTTGCCAGGACTTGAACCC+AGG | + | chr5_3:8965989-8966008 | None:intergenic | 60.0% | |
| TTGAACCCGGGTCTTTCGGG+GGG | + | chr5_3:8966073-8966092 | None:intergenic | 60.0% | |
| CTTGAACCCGGGTCTTTCGG+GGG | + | chr5_3:8966074-8966093 | None:intergenic | 60.0% | |
| TTGAACCCGGGTCTTTCGGG+GGG | + | chr5_3:8966073-8966092 | None:intergenic | 60.0% | |
| CTTGAACCCGGGTCTTTCGG+GGG | + | chr5_3:8966074-8966093 | None:intergenic | 60.0% | |
| ACTAACCCCCCGAAAGACCC+AGG | - | chr5_3:8966262-8966281 | Msa0796920:intron | 60.0% | |
| CGTTGCCGGGACTTGAACCT+GGG | + | chr5_3:8966282-8966301 | None:intergenic | 60.0% | |
| CCAGGTTCAAGTCCCGGCAA+CGG | - | chr5_3:8966280-8966299 | Msa0796920:intron | 60.0% | |
| GGTGGGGAGTCGGTGAAATG+TGG | + | chr5_3:8967454-8967473 | None:intergenic | 60.0% | |
| !! | ATTTCACCGACTCCCCACCG+AGG | - | chr5_3:8967455-8967474 | Msa0796920:intron | 60.0% |
| ACGATACCTCGGTGGGGAGT+CGG | + | chr5_3:8967464-8967483 | None:intergenic | 60.0% | |
| TCCACCGCCAGACGATACCT+CGG | + | chr5_3:8967475-8967494 | None:intergenic | 60.0% | |
| GGGTTGCTTGGTCCTTAGGC+CGG | + | chr5_3:8968060-8968079 | None:intergenic | 60.0% | |
| GGCCGGCCCTAGAGATTAAG+AGG | + | chr5_3:8968325-8968344 | None:intergenic | 60.0% | |
| TGAACCCGGGTCTTTCGGGG+GGG | + | chr5_3:8966072-8966091 | None:intergenic | 65.0% | |
| CGTTGCCGGGACTTGAACCC+GGG | + | chr5_3:8966085-8966104 | None:intergenic | 65.0% | |
| CCGTTGCCGGGACTTGAACC+CGG | + | chr5_3:8966086-8966105 | None:intergenic | 65.0% | |
| CCGGGTTCAAGTCCCGGCAA+CGG | - | chr5_3:8966083-8966102 | Msa0796920:CDS | 65.0% | |
| TGAACCCGGGTCTTTCGGGG+GGG | + | chr5_3:8966072-8966091 | None:intergenic | 65.0% | |
| CGTTGCCGGGACTTGAACCC+GGG | + | chr5_3:8966085-8966104 | None:intergenic | 65.0% | |
| CCGTTGCCGGGACTTGAACC+CGG | + | chr5_3:8966086-8966105 | None:intergenic | 65.0% | |
| CCGGGTTCAAGTCCCGGCAA+CGG | - | chr5_3:8966083-8966102 | Msa0796920:CDS | 65.0% | |
| CCGTTGCCGGGACTTGAACC+TGG | + | chr5_3:8966086-8966105 | None:intergenic | 65.0% | |
| !! | CTCCCCACCGAGGTATCGTC+TGG | - | chr5_3:8967465-8967484 | Msa0796920:intron | 65.0% |
| CGCCAGACGATACCTCGGTG+GGG | + | chr5_3:8967470-8967489 | None:intergenic | 65.0% | |
| CCGCCAGACGATACCTCGGT+GGG | + | chr5_3:8967471-8967490 | None:intergenic | 65.0% | |
| !! | CCCACCGAGGTATCGTCTGG+CGG | - | chr5_3:8967468-8967487 | Msa0796920:intron | 65.0% |
| ACCGCCAGACGATACCTCGG+TGG | + | chr5_3:8967472-8967491 | None:intergenic | 65.0% | |
| !! | ACCGAGGTATCGTCTGGCGG+TGG | - | chr5_3:8967471-8967490 | Msa0796920:intron | 65.0% |
| !! | GAGGTATCGTCTGGCGGTGG+AGG | - | chr5_3:8967474-8967493 | Msa0796920:intron | 65.0% |
| AACCCGGGTCTTTCGGGGGG+GGG | + | chr5_3:8966070-8966089 | None:intergenic | 70.0% | |
| GAACCCGGGTCTTTCGGGGG+GGG | + | chr5_3:8966071-8966090 | None:intergenic | 70.0% | |
| TCCCACCCCCCCGAAAGACC+CGG | - | chr5_3:8966151-8966170 | Msa0796920:intron | 70.0% | |
| ACCCGGGTCTTTCGGGGGGG+GGG | + | chr5_3:8966069-8966088 | None:intergenic | 75.0% | |
| CCCGGGTCTTTCGGGGGGGT+GGG | + | chr5_3:8966155-8966174 | None:intergenic | 75.0% | |
| CCCACCCCCCCGAAAGACCC+GGG | - | chr5_3:8966152-8966171 | Msa0796920:intron | 75.0% | |
| ACCCGGGTCTTTCGGGGGGG+TGG | + | chr5_3:8966069-8966088 | None:intergenic | 75.0% | |
| ! | TCTTTCGGGGGGGGGGGGGG+GGG | + | chr5_3:8966062-8966081 | None:intergenic | 80.0% |
| ! | GTCTTTCGGGGGGGGGGGGG+GGG | + | chr5_3:8966063-8966082 | None:intergenic | 80.0% |
| ! | GGTCTTTCGGGGGGGGGGGG+GGG | + | chr5_3:8966064-8966083 | None:intergenic | 80.0% |
| ! | GGGTCTTTCGGGGGGGGGGG+GGG | + | chr5_3:8966065-8966084 | None:intergenic | 80.0% |
| ! | CGGGTCTTTCGGGGGGGGGG+GGG | + | chr5_3:8966066-8966085 | None:intergenic | 80.0% |
| ! | CCGGGTCTTTCGGGGGGGGG+GGG | + | chr5_3:8966067-8966086 | None:intergenic | 80.0% |
| ! | CCCCCCCCCCCCGAAAGACC+CGG | - | chr5_3:8966064-8966083 | Msa0796920:CDS | 80.0% |
| ! | CCCGGGTCTTTCGGGGGGGG+GGG | + | chr5_3:8966068-8966087 | None:intergenic | 80.0% |
| ! | CCCCCCCCCCCGAAAGACCC+GGG | - | chr5_3:8966065-8966084 | Msa0796920:CDS | 80.0% |
| ! | TTTCGGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966060-8966079 | None:intergenic | 85.0% |
| ! | CTTTCGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966061-8966080 | None:intergenic | 85.0% |
| ! | TTCGGGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966059-8966078 | None:intergenic | 90.0% |
| ! | TCGGGGGGGGGGGGGGGGGG+GGG | + | chr5_3:8966058-8966077 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 8964264 | 8971312 | 8964264 | ID=Msa0796920;Name=Msa0796920 |
| chr5_3 | mRNA | 8964264 | 8971312 | 8964264 | ID=Msa0796920-mRNA-1;Parent=Msa0796920;Name=Msa0796920-mRNA-1;_AED=0.26;_eAED=0.26;_QI=63|0.83|0.85|1|0.83|0.85|7|236|314 |
| chr5_3 | exon | 8964264 | 8964647 | 8964264 | ID=Msa0796920-mRNA-1:exon:3820;Parent=Msa0796920-mRNA-1 |
| chr5_3 | exon | 8965492 | 8965549 | 8965492 | ID=Msa0796920-mRNA-1:exon:3819;Parent=Msa0796920-mRNA-1 |
| chr5_3 | exon | 8965652 | 8965914 | 8965652 | ID=Msa0796920-mRNA-1:exon:3818;Parent=Msa0796920-mRNA-1 |
| chr5_3 | exon | 8966059 | 8966145 | 8966059 | ID=Msa0796920-mRNA-1:exon:3817;Parent=Msa0796920-mRNA-1 |
| chr5_3 | exon | 8970608 | 8970665 | 8970608 | ID=Msa0796920-mRNA-1:exon:3816;Parent=Msa0796920-mRNA-1 |
| chr5_3 | exon | 8970775 | 8971019 | 8970775 | ID=Msa0796920-mRNA-1:exon:3815;Parent=Msa0796920-mRNA-1 |
| chr5_3 | exon | 8971164 | 8971312 | 8971164 | ID=Msa0796920-mRNA-1:exon:3814;Parent=Msa0796920-mRNA-1 |
| chr5_3 | five_prime_UTR | 8971250 | 8971312 | 8971250 | ID=Msa0796920-mRNA-1:five_prime_utr;Parent=Msa0796920-mRNA-1 |
| chr5_3 | CDS | 8971164 | 8971249 | 8971164 | ID=Msa0796920-mRNA-1:cds;Parent=Msa0796920-mRNA-1 |
| chr5_3 | CDS | 8970775 | 8971019 | 8970775 | ID=Msa0796920-mRNA-1:cds;Parent=Msa0796920-mRNA-1 |
| chr5_3 | CDS | 8970608 | 8970665 | 8970608 | ID=Msa0796920-mRNA-1:cds;Parent=Msa0796920-mRNA-1 |
| chr5_3 | CDS | 8966059 | 8966145 | 8966059 | ID=Msa0796920-mRNA-1:cds;Parent=Msa0796920-mRNA-1 |
| chr5_3 | CDS | 8965652 | 8965914 | 8965652 | ID=Msa0796920-mRNA-1:cds;Parent=Msa0796920-mRNA-1 |
| chr5_3 | CDS | 8965492 | 8965549 | 8965492 | ID=Msa0796920-mRNA-1:cds;Parent=Msa0796920-mRNA-1 |
| chr5_3 | CDS | 8964500 | 8964647 | 8964500 | ID=Msa0796920-mRNA-1:cds;Parent=Msa0796920-mRNA-1 |
| chr5_3 | three_prime_UTR | 8964264 | 8964499 | 8964264 | ID=Msa0796920-mRNA-1:three_prime_utr;Parent=Msa0796920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
