Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718820 | XP_024639066.1 | 83.360 | 631 | 21 | 4 | 1 | 550 | 1 | 628 | 0.0 | 1052 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718820 | sp|Q8VXZ5|XG113_ARATH | 62.243 | 633 | 151 | 5 | 5 | 549 | 11 | 643 | 0.0 | 786 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718820 | A0A396HPX4 | 83.360 | 631 | 21 | 4 | 1 | 550 | 1 | 628 | 0.0 | 1052 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0120540 | Msa0718820 | -0.806003 | 1.015606e-49 | -8.615850e-47 |
| Msa0718820 | Msa0839760 | 0.928448 | 2.847821e-92 | -8.615850e-47 |
| Msa0718820 | Msa1336750 | 0.953748 | 1.383134e-111 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718820 | MtrunA17_Chr5g0408171 | 83.360 | 631 | 21 | 4 | 1 | 550 | 1 | 628 | 0.0 | 1052 |
| Msa0718820 | MtrunA17_Chr8g0369811 | 67.670 | 631 | 121 | 4 | 2 | 549 | 6 | 636 | 0.0 | 847 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0718820 | AT2G35610.1 | 62.243 | 633 | 151 | 5 | 5 | 549 | 11 | 643 | 0.0 | 786 |
Find 173 sgRNAs with CRISPR-Local
Find 477 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGCTTTCTCGACACATTT+TGG | 0.152798 | 5_1:+13151411 | None:intergenic |
| ATGAATCACTGACACATTTA+TGG | 0.176197 | 5_1:+13146265 | None:intergenic |
| TGCATACTTGGTAATTAATA+AGG | 0.202143 | 5_1:+13148352 | None:intergenic |
| TTGCTTGTAATTAAAATAAT+AGG | 0.226952 | 5_1:-13146026 | Msa0718820:three_prime_UTR |
| TACTCTCTAAAATCGATATC+AGG | 0.263759 | 5_1:+13147169 | None:intergenic |
| AACATTGCAAATTAGAGAAT+TGG | 0.271959 | 5_1:-13146151 | Msa0718820:three_prime_UTR |
| TTGTCCAGATGAAACAAATT+AGG | 0.276729 | 5_1:-13148237 | Msa0718820:intron |
| CCAGGAGGATTATAGTATTC+AGG | 0.288957 | 5_1:+13149047 | None:intergenic |
| TATTTGATGCATTACAATCT+TGG | 0.291961 | 5_1:+13146972 | None:intergenic |
| ACATATATTACGATATATAC+TGG | 0.302979 | 5_1:-13146522 | Msa0718820:CDS |
| GACATCCTCAACATGGATAA+AGG | 0.307970 | 5_1:+13146236 | None:intergenic |
| CCGCTTAGCAACAAGCGTTT+TGG | 0.310588 | 5_1:+13148402 | None:intergenic |
| CCTTTGTTGAACCAATTCTT+TGG | 0.316391 | 5_1:+13151331 | None:intergenic |
| CATCAAATAATTTAACTGTT+GGG | 0.338884 | 5_1:-13146958 | Msa0718820:CDS |
| TTGATGATAGTCTGGAAGTT+TGG | 0.339802 | 5_1:-13150385 | Msa0718820:CDS |
| ATAAACTCCATACTGCCTTT+TGG | 0.344303 | 5_1:-13150707 | Msa0718820:CDS |
| TACAGAGTCTGCGATTAAAT+TGG | 0.349125 | 5_1:-13150162 | Msa0718820:intron |
| AGCCTCATCTCATATGTTGT+TGG | 0.351863 | 5_1:+13146125 | None:intergenic |
| TTAAACACTACACCGGTATA+TGG | 0.355690 | 5_1:-13146573 | Msa0718820:CDS |
| ATTTGATGCATTACAATCTT+GGG | 0.367102 | 5_1:+13146973 | None:intergenic |
| ATGTTCATCGAAACACTATA+GGG | 0.371885 | 5_1:-13146415 | Msa0718820:three_prime_UTR |
| GTTTAGACTGACCAAAGAAT+TGG | 0.380928 | 5_1:-13151342 | Msa0718820:CDS |
| CAACATCCATGGTGCTCATA+TGG | 0.383723 | 5_1:+13150780 | None:intergenic |
| TTCTCCAACATTTCATAAGA+TGG | 0.386465 | 5_1:-13150750 | Msa0718820:CDS |
| CAGTGATGGATTATCAAGTA+TGG | 0.388316 | 5_1:+13147144 | None:intergenic |
| CCGGGATAACGAGCAAGATA+TGG | 0.388736 | 5_1:+13150452 | None:intergenic |
| TATGTTCATCGAAACACTAT+AGG | 0.390048 | 5_1:-13146416 | Msa0718820:three_prime_UTR |
| CACTATGGTGCAGGATTGAT+AGG | 0.392370 | 5_1:-13147967 | Msa0718820:CDS |
| GTTTCCTCATTGCTATGCTT+TGG | 0.396200 | 5_1:+13146920 | None:intergenic |
| AACATTATAATAGTTACATT+TGG | 0.397598 | 5_1:-13151299 | Msa0718820:intron |
| TCCTTTGGATCATGTGTTTG+AGG | 0.399480 | 5_1:-13147885 | Msa0718820:intron |
| GAACTTCCAGAGGAAGAGTT+TGG | 0.403101 | 5_1:-13147193 | Msa0718820:CDS |
| GCATCAAATAATTTAACTGT+TGG | 0.416010 | 5_1:-13146959 | Msa0718820:CDS |
| AACAGTTGTTGATGATAGTC+TGG | 0.434242 | 5_1:-13150393 | Msa0718820:CDS |
| GGTCAGTCTAAACTCTTTCA+AGG | 0.435148 | 5_1:+13151352 | None:intergenic |
| TTTAGGTCATGCCTCCACTA+TGG | 0.437519 | 5_1:-13147982 | Msa0718820:intron |
| TTGTGGCAGATGATAAGATA+TGG | 0.442083 | 5_1:-13150118 | Msa0718820:CDS |
| GCATACTTGGTAATTAATAA+GGG | 0.442561 | 5_1:+13148353 | None:intergenic |
| CGAGGAGGAACATTCAAAAC+AGG | 0.443521 | 5_1:+13151392 | None:intergenic |
| GATATTGTCCACAGAGAGTT+GGG | 0.444371 | 5_1:-13150077 | Msa0718820:CDS |
| TCAGAAGTTTGAGGAGGGAT+TGG | 0.448194 | 5_1:+13146478 | None:intergenic |
| CCATATCTTGCTCGTTATCC+CGG | 0.452515 | 5_1:-13150452 | Msa0718820:CDS |
| TTCGACACCAAAAGGCAGTA+TGG | 0.454549 | 5_1:+13150700 | None:intergenic |
| CTCTGGAAGTTCATTTAACA+TGG | 0.457114 | 5_1:+13147204 | None:intergenic |
| GGAGGGATTGGCTTCCATCC+AGG | 0.457361 | 5_1:+13146490 | None:intergenic |
| ATCAAATAATTTAACTGTTG+GGG | 0.457643 | 5_1:-13146957 | Msa0718820:CDS |
| CCACTGCAAAAGATACTTGA+AGG | 0.465347 | 5_1:+13149987 | None:intergenic |
| CTTCTACAACCTCTTCAGCT+TGG | 0.465576 | 5_1:-13152603 | Msa0718820:CDS |
| ACATCCTCAACATGGATAAA+GGG | 0.468668 | 5_1:+13146237 | None:intergenic |
| GGATGTTAAAACATCTGCTC+CGG | 0.469326 | 5_1:+13150433 | None:intergenic |
| CAAAGAATTGGTTCAACAAA+GGG | 0.478416 | 5_1:-13151330 | Msa0718820:CDS |
| TCTCCAACATTTCATAAGAT+GGG | 0.482806 | 5_1:-13150749 | Msa0718820:CDS |
| AGGCTATGGTTTCCCCATCC+AGG | 0.483154 | 5_1:-13147947 | Msa0718820:CDS |
| TCAGGGCCAAACTCTTCCTC+TGG | 0.484951 | 5_1:+13147187 | None:intergenic |
| ACTTTATTGGAAAGGGGTAC+CGG | 0.488262 | 5_1:-13150819 | Msa0718820:intron |
| TACTGACATGGTTTGGTTGA+AGG | 0.488688 | 5_1:-13150663 | Msa0718820:intron |
| CGATTAAATTGGCAAAGGAA+TGG | 0.490912 | 5_1:-13150151 | Msa0718820:CDS |
| TGTGTGATACTGACATGGTT+TGG | 0.491270 | 5_1:-13150670 | Msa0718820:CDS |
| GGATGTCAGTACTTAGTTGA+GGG | 0.492243 | 5_1:-13146220 | Msa0718820:three_prime_UTR |
| AGTCTGGAAGTTTGGAAAGA+AGG | 0.492974 | 5_1:-13150377 | Msa0718820:intron |
| CTCCCCATCTTATGAAATGT+TGG | 0.493611 | 5_1:+13150746 | None:intergenic |
| ATAAGATATGGGATCAGAAT+GGG | 0.494577 | 5_1:-13150106 | Msa0718820:CDS |
| ATAAAAGGGTTACTTGAAAG+AGG | 0.496404 | 5_1:+13152568 | None:intergenic |
| ATCTACACTGTTGTTATCGT+TGG | 0.497768 | 5_1:-13152670 | Msa0718820:CDS |
| TTATGATGGAAATCTAAAGC+TGG | 0.498264 | 5_1:-13150018 | Msa0718820:CDS |
| TGTTGGTATAACTTGATCAC+TGG | 0.499076 | 5_1:+13150412 | None:intergenic |
| TTAACCTCTGAGGGCAGTGA+TGG | 0.499809 | 5_1:+13147130 | None:intergenic |
| ATCAACAGTTCGACACCAAA+AGG | 0.500021 | 5_1:+13150692 | None:intergenic |
| CCCCTTCAAAACACCTGGAT+GGG | 0.500946 | 5_1:+13147934 | None:intergenic |
| GATGTTCACCTCTGTAAAGA+AGG | 0.504544 | 5_1:-13146998 | Msa0718820:CDS |
| ACTGCACAATGAAGAGAAGA+AGG | 0.505529 | 5_1:+13152782 | None:intergenic |
| TGAGCACCATGGATGTTGGC+TGG | 0.508658 | 5_1:-13150775 | Msa0718820:CDS |
| TGATATTGTCCACAGAGAGT+TGG | 0.510495 | 5_1:-13150078 | Msa0718820:CDS |
| GATAAGATATGGGATCAGAA+TGG | 0.511259 | 5_1:-13150107 | Msa0718820:CDS |
| GGTGCAGGATTGATAGGCTA+TGG | 0.512598 | 5_1:-13147961 | Msa0718820:CDS |
| TCATGCCTCCACTATGGTGC+AGG | 0.513667 | 5_1:-13147976 | Msa0718820:CDS |
| AATGTTGTGTGCACTGCATA+TGG | 0.519394 | 5_1:+13149134 | None:intergenic |
| AGGGTATGTATCAGCAACTC+AGG | 0.520087 | 5_1:-13149163 | Msa0718820:CDS |
| CACACAACATTTCAATATGC+AGG | 0.521713 | 5_1:-13149122 | Msa0718820:CDS |
| TATATCGTAATATATGTGAC+CGG | 0.524119 | 5_1:+13146528 | None:intergenic |
| TATAGTATTCAGGTGGGTCA+TGG | 0.526762 | 5_1:+13149057 | None:intergenic |
| AAAGCATAGCAATGAGGAAA+CGG | 0.527987 | 5_1:-13146918 | Msa0718820:intron |
| TAAATTGGCAAAGGAATGGA+TGG | 0.528455 | 5_1:-13150147 | Msa0718820:CDS |
| GCTAGAAGTTTCTATTCAAG+AGG | 0.528803 | 5_1:-13146060 | Msa0718820:three_prime_UTR |
| TCACCAGTGTTCTGTTCAGA+AGG | 0.530066 | 5_1:+13148194 | None:intergenic |
| TGATCCAAAGGACAGAGAAA+AGG | 0.530345 | 5_1:+13147896 | None:intergenic |
| TCATTGTGCAGTGAAAATCA+TGG | 0.530386 | 5_1:-13152771 | Msa0718820:five_prime_UTR |
| ATATACTGGGATGAGAAACC+TGG | 0.532396 | 5_1:-13146508 | Msa0718820:CDS |
| CCACAGAGAGTTGGGACCAT+CGG | 0.535254 | 5_1:-13150069 | Msa0718820:CDS |
| CATCTTCAGAAGTTTGAGGA+GGG | 0.537277 | 5_1:+13146473 | None:intergenic |
| AAAAGAGGACCAAGCTGAAG+AGG | 0.545642 | 5_1:+13152594 | None:intergenic |
| TTTCAATATGCAGGCACAGA+AGG | 0.546523 | 5_1:-13149113 | Msa0718820:CDS |
| GTCAGTCTAAACTCTTTCAA+GGG | 0.548005 | 5_1:+13151353 | None:intergenic |
| TCTTAGTCTTCACAACGAGT+TGG | 0.548375 | 5_1:+13146350 | None:intergenic |
| AGACTATCATCAACAACTGT+TGG | 0.549115 | 5_1:+13150395 | None:intergenic |
| TGTGTGACCGATCACACTCC+CGG | 0.550835 | 5_1:-13146547 | Msa0718820:CDS |
| GAGCACCATGGATGTTGGCT+GGG | 0.551672 | 5_1:-13150774 | Msa0718820:CDS |
| CTGACACATTTATGGACACC+GGG | 0.551803 | 5_1:+13146273 | None:intergenic |
| TACGCCCTTTATCCATGTTG+AGG | 0.554675 | 5_1:-13146241 | Msa0718820:three_prime_UTR |
| CCTGAATACTATAATCCTCC+TGG | 0.555188 | 5_1:-13149047 | Msa0718820:intron |
| ACACTTATTGAAGTCATGCC+CGG | 0.556796 | 5_1:-13146291 | Msa0718820:three_prime_UTR |
| TATGATGGAAATCTAAAGCT+GGG | 0.556906 | 5_1:-13150017 | Msa0718820:CDS |
| GTGTAGATCGTGAGGAAGAG+AGG | 0.558247 | 5_1:+13152685 | None:intergenic |
| CATAAACAGAAGATATTGAA+AGG | 0.558328 | 5_1:-13146384 | Msa0718820:three_prime_UTR |
| TATGTGACCGGGAGTGTGAT+CGG | 0.558850 | 5_1:+13146540 | None:intergenic |
| CTAAGCGGAAAGCATACCAT+TGG | 0.560834 | 5_1:-13148387 | Msa0718820:CDS |
| TATGTATCAGCAACTCAGGT+TGG | 0.561264 | 5_1:-13149159 | Msa0718820:CDS |
| ACTTGAAAGAGGAGGAAAAG+AGG | 0.562823 | 5_1:+13152579 | None:intergenic |
| ACCCCTTCAAAACACCTGGA+TGG | 0.563163 | 5_1:+13147933 | None:intergenic |
| AAGGGTAAAATGTGATCCAA+TGG | 0.568807 | 5_1:+13148371 | None:intergenic |
| TGATCATCTTCAGAAGTTTG+AGG | 0.571519 | 5_1:+13146469 | None:intergenic |
| AGCACCATGGATGTTGGCTG+GGG | 0.572999 | 5_1:-13150773 | Msa0718820:CDS |
| AGGATGTCAGTACTTAGTTG+AGG | 0.574833 | 5_1:-13146221 | Msa0718820:three_prime_UTR |
| CCCTTCAAAACACCTGGATG+GGG | 0.576084 | 5_1:+13147935 | None:intergenic |
| GATGTTAAAACATCTGCTCC+GGG | 0.576359 | 5_1:+13150434 | None:intergenic |
| CTGAAGATGATCACCCACCT+TGG | 0.580153 | 5_1:-13146459 | Msa0718820:CDS |
| ACCTCAAACACATGATCCAA+AGG | 0.580442 | 5_1:+13147884 | None:intergenic |
| TGACATTTATTAACCTCTGA+GGG | 0.581541 | 5_1:+13147121 | None:intergenic |
| ACTGACACATTTATGGACAC+CGG | 0.582245 | 5_1:+13146272 | None:intergenic |
| CCAAAGAATTGGTTCAACAA+AGG | 0.582324 | 5_1:-13151331 | Msa0718820:CDS |
| ACTCTCTAAAATCGATATCA+GGG | 0.584688 | 5_1:+13147170 | None:intergenic |
| TTGACATTTATTAACCTCTG+AGG | 0.585437 | 5_1:+13147120 | None:intergenic |
| TAACGAGCAAGATATGGAAG+TGG | 0.588038 | 5_1:+13150458 | None:intergenic |
| TGTGGCAGATGATAAGATAT+GGG | 0.588167 | 5_1:-13150117 | Msa0718820:CDS |
| CTCCAACATTTCATAAGATG+GGG | 0.588837 | 5_1:-13150748 | Msa0718820:CDS |
| AACATTTCATAAGATGGGGA+GGG | 0.590957 | 5_1:-13150744 | Msa0718820:CDS |
| CATATATTACGATATATACT+GGG | 0.592955 | 5_1:-13146521 | Msa0718820:CDS |
| CAACATTTCATAAGATGGGG+AGG | 0.592995 | 5_1:-13150745 | Msa0718820:CDS |
| GGAGGATTATAGTATTCAGG+TGG | 0.593240 | 5_1:+13149050 | None:intergenic |
| TCAAATAATTTAACTGTTGG+GGG | 0.593627 | 5_1:-13146956 | Msa0718820:CDS |
| CTTGGGTTCCTTCTTTACAG+AGG | 0.594617 | 5_1:+13146990 | None:intergenic |
| GAAATTGACCTCACCAAGGT+GGG | 0.595017 | 5_1:+13146446 | None:intergenic |
| ATAGACCCCTTCAAAACACC+TGG | 0.595066 | 5_1:+13147929 | None:intergenic |
| TGTAGAAGAATAGTGTATAG+CGG | 0.596162 | 5_1:+13152618 | None:intergenic |
| CTATCAATCCTGCACCATAG+TGG | 0.596448 | 5_1:+13147968 | None:intergenic |
| CCAAAACGCTTGTTGCTAAG+CGG | 0.599022 | 5_1:-13148402 | Msa0718820:CDS |
| CATATGAGCACCATGGATGT+TGG | 0.603158 | 5_1:-13150779 | Msa0718820:CDS |
| AGAACCCCAGCCAACATCCA+TGG | 0.605293 | 5_1:+13150769 | None:intergenic |
| GTCTGCGATTAAATTGGCAA+AGG | 0.607208 | 5_1:-13150156 | Msa0718820:CDS |
| TTCCCTTCTGAACAGAACAC+TGG | 0.608871 | 5_1:-13148197 | Msa0718820:intron |
| GGTCACACAACACCATATAC+CGG | 0.614742 | 5_1:+13146561 | None:intergenic |
| CCGATGGTCCCAACTCTCTG+TGG | 0.615254 | 5_1:+13150069 | None:intergenic |
| ATTTCCAAAGCATAGCAATG+AGG | 0.615304 | 5_1:-13146924 | Msa0718820:CDS |
| AAAGCATGGCTTCTCGTAGT+CGG | 0.615395 | 5_1:+13149081 | None:intergenic |
| AACGAGCAAGATATGGAAGT+GGG | 0.615612 | 5_1:+13150459 | None:intergenic |
| CACCAGTGTTCTGTTCAGAA+GGG | 0.620203 | 5_1:+13148195 | None:intergenic |
| CCACTGTCCTCGTCAACCGA+TGG | 0.622308 | 5_1:+13150053 | None:intergenic |
| GGAATGGATGGAACTGCTTG+TGG | 0.631261 | 5_1:-13150135 | Msa0718820:CDS |
| TCATCTTCAGAAGTTTGAGG+AGG | 0.634318 | 5_1:+13146472 | None:intergenic |
| AGGTGGGTCATGGAAAAGCA+TGG | 0.640006 | 5_1:+13149067 | None:intergenic |
| TCAATCCTGCACCATAGTGG+AGG | 0.641393 | 5_1:+13147971 | None:intergenic |
| AAAGGGTTACTTGAAAGAGG+AGG | 0.644273 | 5_1:+13152571 | None:intergenic |
| ATATCGTAATATATGTGACC+GGG | 0.644860 | 5_1:+13146529 | None:intergenic |
| GTTGGGACCATCGGTTGACG+AGG | 0.646860 | 5_1:-13150060 | Msa0718820:CDS |
| TGAAATTGACCTCACCAAGG+TGG | 0.650431 | 5_1:+13146445 | None:intergenic |
| TGTTCATCGAAACACTATAG+GGG | 0.651954 | 5_1:-13146414 | Msa0718820:three_prime_UTR |
| AAGTACTGACATCCTCAACA+TGG | 0.653072 | 5_1:+13146229 | None:intergenic |
| AACCAACAACATATGAGATG+AGG | 0.654141 | 5_1:-13146127 | Msa0718820:three_prime_UTR |
| ACTGGGATGAGAAACCTGGA+TGG | 0.657363 | 5_1:-13146504 | Msa0718820:CDS |
| GATGATCACCCACCTTGGTG+AGG | 0.658622 | 5_1:-13146454 | Msa0718820:exon |
| TAACAACAGTGTAGATCGTG+AGG | 0.660213 | 5_1:+13152677 | None:intergenic |
| TAATCCATCACTGCCCTCAG+AGG | 0.663209 | 5_1:-13147134 | Msa0718820:intron |
| CCATCGGTTGACGAGGACAG+TGG | 0.663505 | 5_1:-13150053 | Msa0718820:CDS |
| AGTCTAAACTCTTTCAAGGG+TGG | 0.663897 | 5_1:+13151356 | None:intergenic |
| TTGGAGCTCAGGGAAAGCAG+AGG | 0.666154 | 5_1:+13151430 | None:intergenic |
| GCATGGCTTCTCGTAGTCGG+TGG | 0.666555 | 5_1:+13149084 | None:intergenic |
| AAACGACTTAAACACTACAC+CGG | 0.668427 | 5_1:-13146580 | Msa0718820:CDS |
| CATGTTAAATGAACTTCCAG+AGG | 0.669463 | 5_1:-13147203 | Msa0718820:CDS |
| GTTGATGTGTGATACTGACA+TGG | 0.689315 | 5_1:-13150675 | Msa0718820:CDS |
| GAGGATTATAGTATTCAGGT+GGG | 0.690958 | 5_1:+13149051 | None:intergenic |
| GAACAGCCATATGAGCACCA+TGG | 0.702964 | 5_1:-13150786 | Msa0718820:CDS |
| AAACAGAAGATATTGAAAGG+CGG | 0.715428 | 5_1:-13146381 | Msa0718820:three_prime_UTR |
| TTCTGAAATTGACCTCACCA+AGG | 0.719723 | 5_1:+13146442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTTGATTTTTCTATT+TGG | + | chr5_1:13146048-13146067 | None:intergenic | 10.0% |
| !! | AAATTGTAAAAGATTTAAAA+TGG | - | chr5_1:13146105-13146124 | Msa0718820:three_prime_UTR | 10.0% |
| !! | TTATAATCAAACATATATTA+AGG | + | chr5_1:13148499-13148518 | None:intergenic | 10.0% |
| !! | AAAAAAAACTAAAAAAAGAT+AGG | - | chr5_1:13149827-13149846 | Msa0718820:intron | 10.0% |
| !! | AAAAAAACTAAAAAAAGATA+GGG | - | chr5_1:13149828-13149847 | Msa0718820:intron | 10.0% |
| !!! | TTTGGATTAAATCTTTTTTT+TGG | + | chr5_1:13146200-13146219 | None:intergenic | 15.0% |
| !! | ACTAAATTATTGATGTATAT+TGG | + | chr5_1:13146286-13146305 | None:intergenic | 15.0% |
| !! | AATATACATCAATAATTTAG+TGG | - | chr5_1:13146285-13146304 | Msa0718820:three_prime_UTR | 15.0% |
| !! | ATGTAAAATAGAATAAAAAG+AGG | + | chr5_1:13146585-13146604 | None:intergenic | 15.0% |
| !!! | TACATATCAAATTCTAAAAA+GGG | + | chr5_1:13146684-13146703 | None:intergenic | 15.0% |
| !!! | ATACATATCAAATTCTAAAA+AGG | + | chr5_1:13146685-13146704 | None:intergenic | 15.0% |
| !! | TATTAACGATACATTATAAA+CGG | + | chr5_1:13146967-13146986 | None:intergenic | 15.0% |
| !!! | TTTAATTAGTATGCATTTTT+TGG | - | chr5_1:13147038-13147057 | Msa0718820:intron | 15.0% |
| !! | TAATGATTAAAATGTAGTAA+TGG | + | chr5_1:13147435-13147454 | None:intergenic | 15.0% |
| !! | AACATTATAATAGTTACATT+TGG | - | chr5_1:13147823-13147842 | Msa0718820:intron | 15.0% |
| !! | ATAAACAACTAATTAAAAGA+AGG | + | chr5_1:13148221-13148240 | None:intergenic | 15.0% |
| !!! | AATCAAATAATGGAATATTT+AGG | + | chr5_1:13148632-13148651 | None:intergenic | 15.0% |
| !! | AATATTCCATTATTTGATTA+TGG | - | chr5_1:13148633-13148652 | Msa0718820:intron | 15.0% |
| !!! | TAATAATTGAAGGATAATTT+TGG | + | chr5_1:13150303-13150322 | None:intergenic | 15.0% |
| !! | TTAATTCTCTTCATTTAATT+AGG | - | chr5_1:13150345-13150364 | Msa0718820:intron | 15.0% |
| !! | TAATTCTCTTCATTTAATTA+GGG | - | chr5_1:13150346-13150365 | Msa0718820:intron | 15.0% |
| !!! | AAACATTTATTTTCATGAAA+AGG | + | chr5_1:13150627-13150646 | None:intergenic | 15.0% |
| !!! | AAATGTTTTAATTTTTTTCC+AGG | - | chr5_1:13150669-13150688 | Msa0718820:CDS | 15.0% |
| !!! | AATGTTTTAATTTTTTTCCA+GGG | - | chr5_1:13150670-13150689 | Msa0718820:CDS | 15.0% |
| !! | AGTTCTTTATGTATATATTT+AGG | - | chr5_1:13151123-13151142 | Msa0718820:intron | 15.0% |
| !! | TTATTCAAATAAACTGAAAA+CGG | + | chr5_1:13151430-13151449 | None:intergenic | 15.0% |
| !!! | TCATTGTTTTAAATTTTGAT+TGG | + | chr5_1:13152029-13152048 | None:intergenic | 15.0% |
| !! | GATTAAAATAAATAAATGCA+TGG | + | chr5_1:13152499-13152518 | None:intergenic | 15.0% |
| !!! | TGCATTTATTTATTTTAATC+AGG | - | chr5_1:13152499-13152518 | Msa0718820:intron | 15.0% |
| !!! | TTATTTATTTTAATCAGGAA+AGG | - | chr5_1:13152504-13152523 | Msa0718820:intron | 15.0% |
| !!! | TATTTATTTTAATCAGGAAA+GGG | - | chr5_1:13152505-13152524 | Msa0718820:intron | 15.0% |
| !! | TTGCTTGTAATTAAAATAAT+AGG | - | chr5_1:13153096-13153115 | Msa0718820:intron | 15.0% |
| !! | AATGGAAGTAAAATTATACA+AGG | - | chr5_1:13146123-13146142 | Msa0718820:three_prime_UTR | 20.0% |
| !!! | TAAATCTTTTTTTTGGTCAA+AGG | + | chr5_1:13146193-13146212 | None:intergenic | 20.0% |
| !!! | TATCTTTTTTTGTTAGTTGT+TGG | - | chr5_1:13146637-13146656 | Msa0718820:intron | 20.0% |
| !!! | TTGAAACTTGAAAATTGTTT+TGG | - | chr5_1:13146748-13146767 | Msa0718820:intron | 20.0% |
| !!! | TTTATGTTTCTTTTGAGAAA+TGG | - | chr5_1:13146998-13147017 | Msa0718820:CDS | 20.0% |
| !!! | ATGCATTTTTTGGTATAAAA+AGG | - | chr5_1:13147048-13147067 | Msa0718820:intron | 20.0% |
| !!! | TATAAAAAGGTTTAGTTTAC+TGG | - | chr5_1:13147061-13147080 | Msa0718820:intron | 20.0% |
| !! | ATTTAGAAATAACTGCAAAT+TGG | - | chr5_1:13147196-13147215 | Msa0718820:CDS | 20.0% |
| !! | AGGAATATAATATATCTTAG+AGG | + | chr5_1:13148612-13148631 | None:intergenic | 20.0% |
| !! | ATGAAAAATTCCTATATTGT+AGG | + | chr5_1:13148932-13148951 | None:intergenic | 20.0% |
| !!! | ACAATATAGGAATTTTTCAT+TGG | - | chr5_1:13148932-13148951 | Msa0718820:intron | 20.0% |
| !! | ATTGTATAAGAGAAATCAAA+AGG | + | chr5_1:13149233-13149252 | None:intergenic | 20.0% |
| !!! | TCCTTTCATATTATGATTTT+AGG | - | chr5_1:13149939-13149958 | Msa0718820:intron | 20.0% |
| !!! | CCTTTCATATTATGATTTTA+GGG | - | chr5_1:13149940-13149959 | Msa0718820:intron | 20.0% |
| !! | ATTATCCTTCAATTATTAAG+AGG | - | chr5_1:13150305-13150324 | Msa0718820:intron | 20.0% |
| !! | TTATCCTTCAATTATTAAGA+GGG | - | chr5_1:13150306-13150325 | Msa0718820:intron | 20.0% |
| !! | AATTCTCTTCATTTAATTAG+GGG | - | chr5_1:13150347-13150366 | Msa0718820:intron | 20.0% |
| !!! | AATTTGATGAGTCTTATAAA+AGG | - | chr5_1:13150403-13150422 | Msa0718820:CDS | 20.0% |
| !!! | ATTTGATGAGTCTTATAAAA+GGG | - | chr5_1:13150404-13150423 | Msa0718820:CDS | 20.0% |
| !!! | ATTAAAACATTTAGTTCCAA+TGG | + | chr5_1:13150661-13150680 | None:intergenic | 20.0% |
| !!! | ATGTTTTAATTTTTTTCCAG+GGG | - | chr5_1:13150671-13150690 | Msa0718820:CDS | 20.0% |
| !! | AACATAAGTGAATAACAATA+AGG | + | chr5_1:13151292-13151311 | None:intergenic | 20.0% |
| !! | TTAATAAAGGATTATTATGC+CGG | - | chr5_1:13151327-13151346 | Msa0718820:CDS | 20.0% |
| !! | TTTCTCCATAAAAACATAAT+TGG | + | chr5_1:13151502-13151521 | None:intergenic | 20.0% |
| !! | TTATTCAACTCCAAATATAA+GGG | + | chr5_1:13151761-13151780 | None:intergenic | 20.0% |
| !! | CATCAAATAATTTAACTGTT+GGG | - | chr5_1:13152164-13152183 | Msa0718820:intron | 20.0% |
| !! | ATCAAATAATTTAACTGTTG+GGG | - | chr5_1:13152165-13152184 | Msa0718820:intron | 20.0% |
| !! | ACATATATTACGATATATAC+TGG | - | chr5_1:13152600-13152619 | Msa0718820:CDS | 20.0% |
| !! | CATATATTACGATATATACT+GGG | - | chr5_1:13152601-13152620 | Msa0718820:CDS | 20.0% |
| !!! | AAAAAAAAAAGTGCTACATT+CGG | + | chr5_1:13153128-13153147 | None:intergenic | 20.0% |
| !! | GATGTTGAGACATAAATTTT+TGG | + | chr5_1:13146218-13146237 | None:intergenic | 25.0% |
| !!! | AGAATCAGAAATTTTTCAGA+TGG | - | chr5_1:13146388-13146407 | Msa0718820:three_prime_UTR | 25.0% |
| ! | AAAAAGAGGTAGAGATAAAA+GGG | + | chr5_1:13146571-13146590 | None:intergenic | 25.0% |
| ! | TAAAAAGAGGTAGAGATAAA+AGG | + | chr5_1:13146572-13146591 | None:intergenic | 25.0% |
| !!! | TTACATGCATTTTAATCAAG+TGG | - | chr5_1:13146599-13146618 | Msa0718820:CDS | 25.0% |
| !!! | TACATGCATTTTAATCAAGT+GGG | - | chr5_1:13146600-13146619 | Msa0718820:CDS | 25.0% |
| ! | ATTTGATATGTATTGTTGTC+AGG | - | chr5_1:13146692-13146711 | Msa0718820:intron | 25.0% |
| ! | GAAATATCGTAAATTCTCAT+TGG | + | chr5_1:13147151-13147170 | None:intergenic | 25.0% |
| ! | TCTAAATTACAGTTACAAAG+TGG | + | chr5_1:13147183-13147202 | None:intergenic | 25.0% |
| !!! | TCAAAACTCTTTTGAGAAAA+GGG | + | chr5_1:13147275-13147294 | None:intergenic | 25.0% |
| !!! | ATCAAAACTCTTTTGAGAAA+AGG | + | chr5_1:13147276-13147295 | None:intergenic | 25.0% |
| !! | AAAATTACACTGATGGTTTT+TGG | - | chr5_1:13147327-13147346 | Msa0718820:intron | 25.0% |
| !! | AAATTACACTGATGGTTTTT+GGG | - | chr5_1:13147328-13147347 | Msa0718820:intron | 25.0% |
| ! | CAAAAGAAATGAAGAAATAG+AGG | + | chr5_1:13147567-13147586 | None:intergenic | 25.0% |
| !!! | CTATTTCTTCATTTCTTTTG+TGG | - | chr5_1:13147567-13147586 | Msa0718820:intron | 25.0% |
| ! | TTTGTATAGTTGATTAGACT+AGG | - | chr5_1:13148000-13148019 | Msa0718820:intron | 25.0% |
| ! | TTGTATAGTTGATTAGACTA+GGG | - | chr5_1:13148001-13148020 | Msa0718820:intron | 25.0% |
| ! | TTATTTCCTTAAAACTCTCT+AGG | - | chr5_1:13148088-13148107 | Msa0718820:intron | 25.0% |
| ! | ACTTATCATATAAGTGCTTA+CGG | + | chr5_1:13148178-13148197 | None:intergenic | 25.0% |
| ! | GATAAGTGTTTATGCTAAAA+CGG | - | chr5_1:13148191-13148210 | Msa0718820:intron | 25.0% |
| ! | AATTCAAATTCACTACTGTT+TGG | + | chr5_1:13148244-13148263 | None:intergenic | 25.0% |
| !! | GAATTTGAATTCTACCTTTT+AGG | - | chr5_1:13148253-13148272 | Msa0718820:intron | 25.0% |
| !!! | CACATTTTACGTTTTGAATT+TGG | + | chr5_1:13148567-13148586 | None:intergenic | 25.0% |
| ! | CAAATTCAAAACGTAAAATG+TGG | - | chr5_1:13148565-13148584 | Msa0718820:intron | 25.0% |
| ! | AGTATTCAAAACTGTTAACT+AGG | + | chr5_1:13149186-13149205 | None:intergenic | 25.0% |
| ! | ATACAATTAAGTATCTCTGA+AGG | - | chr5_1:13149246-13149265 | Msa0718820:intron | 25.0% |
| ! | TACGTCTAATTGAGTATTTA+AGG | - | chr5_1:13149326-13149345 | Msa0718820:intron | 25.0% |
| ! | ACGTCTAATTGAGTATTTAA+GGG | - | chr5_1:13149327-13149346 | Msa0718820:intron | 25.0% |
| ! | TCTTAAAAGCTAGTTATCAA+GGG | + | chr5_1:13149805-13149824 | None:intergenic | 25.0% |
| ! | ATCTTAAAAGCTAGTTATCA+AGG | + | chr5_1:13149806-13149825 | None:intergenic | 25.0% |
| ! | ATACTTATCAAAGTCTTGAT+TGG | - | chr5_1:13149867-13149886 | Msa0718820:intron | 25.0% |
| ! | TAATATGAAAGGACATTCTT+AGG | + | chr5_1:13149932-13149951 | None:intergenic | 25.0% |
| ! | CCCTAAAATCATAATATGAA+AGG | + | chr5_1:13149943-13149962 | None:intergenic | 25.0% |
| ! | AGAAAAATAATATTACCAGG+AGG | + | chr5_1:13150093-13150112 | None:intergenic | 25.0% |
| ! | GGAAGAAAAATAATATTACC+AGG | + | chr5_1:13150096-13150115 | None:intergenic | 25.0% |
| !! | ATTCTTGTGCATTTTATCAA+GGG | + | chr5_1:13150230-13150249 | None:intergenic | 25.0% |
| !! | AATTCTTGTGCATTTTATCA+AGG | + | chr5_1:13150231-13150250 | None:intergenic | 25.0% |
| ! | ATAAGACTCATCAAATTTCA+AGG | + | chr5_1:13150400-13150419 | None:intergenic | 25.0% |
| !! | TTTGATGAGTCTTATAAAAG+GGG | - | chr5_1:13150405-13150424 | Msa0718820:CDS | 25.0% |
| !!! | TGTTTTAATTTTTTTCCAGG+GGG | - | chr5_1:13150672-13150691 | Msa0718820:CDS | 25.0% |
| !! | GCATACTTGGTAATTAATAA+GGG | + | chr5_1:13150772-13150791 | None:intergenic | 25.0% |
| !! | TGCATACTTGGTAATTAATA+AGG | + | chr5_1:13150773-13150792 | None:intergenic | 25.0% |
| ! | TCAAAAATACAGAAGTGAAA+AGG | + | chr5_1:13150810-13150829 | None:intergenic | 25.0% |
| !!! | TTCACTTCTGTATTTTTGAA+TGG | - | chr5_1:13150811-13150830 | Msa0718820:intron | 25.0% |
| !! | TTGTTATTCACTTATGTTTC+AGG | - | chr5_1:13151294-13151313 | Msa0718820:intron | 25.0% |
| ! | TCCATAAAAACATAATTGGT+GGG | + | chr5_1:13151498-13151517 | None:intergenic | 25.0% |
| ! | TAATTTAGTGCTTACTCAAT+AGG | + | chr5_1:13151615-13151634 | None:intergenic | 25.0% |
| ! | TATTCAACTCCAAATATAAG+GGG | + | chr5_1:13151760-13151779 | None:intergenic | 25.0% |
| ! | CTTATTCAACTCCAAATATA+AGG | + | chr5_1:13151762-13151781 | None:intergenic | 25.0% |
| !! | CATTTTATAGCAGCATAATA+AGG | + | chr5_1:13151878-13151897 | None:intergenic | 25.0% |
| ! | TATAAAATGTACTCTATTGC+AGG | - | chr5_1:13151889-13151908 | Msa0718820:intron | 25.0% |
| ! | ATTTGATGCATTACAATCTT+GGG | + | chr5_1:13152152-13152171 | None:intergenic | 25.0% |
| ! | TATTTGATGCATTACAATCT+TGG | + | chr5_1:13152153-13152172 | None:intergenic | 25.0% |
| ! | GCATCAAATAATTTAACTGT+TGG | - | chr5_1:13152163-13152182 | Msa0718820:intron | 25.0% |
| ! | TCAAATAATTTAACTGTTGG+GGG | - | chr5_1:13152166-13152185 | Msa0718820:intron | 25.0% |
| !!! | ATTTTGATCCATTTAACTGT+TGG | - | chr5_1:13152235-13152254 | Msa0718820:intron | 25.0% |
| !! | TTTTGATCCATTTAACTGTT+GGG | - | chr5_1:13152236-13152255 | Msa0718820:intron | 25.0% |
| ! | TATATCGTAATATATGTGAC+CGG | + | chr5_1:13152597-13152616 | None:intergenic | 25.0% |
| ! | CATAAACAGAAGATATTGAA+AGG | - | chr5_1:13152738-13152757 | Msa0718820:five_prime_UTR | 25.0% |
| ! | AACATTGCAAATTAGAGAAT+TGG | - | chr5_1:13152971-13152990 | Msa0718820:intron | 25.0% |
| !!! | GCACTTTTTTTTTTTCAAAC+AGG | - | chr5_1:13153134-13153153 | Msa0718820:intron | 25.0% |
| ! | TATAGCGGAAAAAACGTATA+AGG | + | chr5_1:13146492-13146511 | None:intergenic | 30.0% |
| TGTAGAAGAATAGTGTATAG+CGG | + | chr5_1:13146507-13146526 | None:intergenic | 30.0% | |
| ATAAAAGGGTTACTTGAAAG+AGG | + | chr5_1:13146557-13146576 | None:intergenic | 30.0% | |
| !!! | GTTGTTGGTTTTGTCATAAA+TGG | - | chr5_1:13146652-13146671 | Msa0718820:intron | 30.0% |
| !! | TTAGGATAGGATTAGTTAGT+TGG | - | chr5_1:13146717-13146736 | Msa0718820:intron | 30.0% |
| !!! | CTTGAAAATTGTTTTGGCAT+TGG | - | chr5_1:13146754-13146773 | Msa0718820:intron | 30.0% |
| !!! | TGGCATTGGTTTTTAATGTA+TGG | - | chr5_1:13146768-13146787 | Msa0718820:intron | 30.0% |
| ! | AGTTACAAAGTGGACTTATA+TGG | + | chr5_1:13147173-13147192 | None:intergenic | 30.0% |
| TAGAAATAACTGCAAATTGG+TGG | - | chr5_1:13147199-13147218 | Msa0718820:CDS | 30.0% | |
| !! | CAAAACTCTTTTGAGAAAAG+GGG | + | chr5_1:13147274-13147293 | None:intergenic | 30.0% |
| TGATGAAATATGATTGCATG+CGG | - | chr5_1:13147299-13147318 | Msa0718820:intron | 30.0% | |
| GGCTAAAAAAATTACACTGA+TGG | - | chr5_1:13147320-13147339 | Msa0718820:intron | 30.0% | |
| ! | CTTTTCAATTCATCAAGCAT+TGG | - | chr5_1:13147532-13147551 | Msa0718820:intron | 30.0% |
| AGAAATGAAGAAATAGAGGA+AGG | + | chr5_1:13147563-13147582 | None:intergenic | 30.0% | |
| ! | CAAAGAATTGGTTCAACAAA+GGG | - | chr5_1:13147792-13147811 | Msa0718820:intron | 30.0% |
| ! | ATTTGGTAACTATGCATTCA+TGG | - | chr5_1:13147840-13147859 | Msa0718820:intron | 30.0% |
| GTTAAGCAATTGAATGATCT+CGG | - | chr5_1:13147880-13147899 | Msa0718820:intron | 30.0% | |
| TCAAATAAGCCAATTGAAAC+AGG | + | chr5_1:13148027-13148046 | None:intergenic | 30.0% | |
| TGCAATGGACACAAAATTAT+TGG | - | chr5_1:13148276-13148295 | Msa0718820:intron | 30.0% | |
| AATGGACACAAAATTATTGG+AGG | - | chr5_1:13148279-13148298 | Msa0718820:intron | 30.0% | |
| !! | AATTATTGGAGGCACTTTAT+TGG | - | chr5_1:13148290-13148309 | Msa0718820:intron | 30.0% |
| TTCTCCAACATTTCATAAGA+TGG | - | chr5_1:13148372-13148391 | Msa0718820:CDS | 30.0% | |
| TCTCCAACATTTCATAAGAT+GGG | - | chr5_1:13148373-13148392 | Msa0718820:CDS | 30.0% | |
| TCTGCTCCATAATCAAATAA+TGG | + | chr5_1:13148642-13148661 | None:intergenic | 30.0% | |
| TTACTGTCTCATTGAATAGT+TGG | - | chr5_1:13148901-13148920 | Msa0718820:intron | 30.0% | |
| ATAAGATATGGGATCAGAAT+GGG | - | chr5_1:13149016-13149035 | Msa0718820:intron | 30.0% | |
| !!! | GGACTTTTTTATGCTTATGA+TGG | - | chr5_1:13149090-13149109 | Msa0718820:CDS | 30.0% |
| ! | TTATGATGGAAATCTAAAGC+TGG | - | chr5_1:13149104-13149123 | Msa0718820:CDS | 30.0% |
| ! | TATGATGGAAATCTAAAGCT+GGG | - | chr5_1:13149105-13149124 | Msa0718820:CDS | 30.0% |
| CGTCTAATTGAGTATTTAAG+GGG | - | chr5_1:13149328-13149347 | Msa0718820:intron | 30.0% | |
| AATTGAGTATTTAAGGGGTT+TGG | - | chr5_1:13149333-13149352 | Msa0718820:intron | 30.0% | |
| TACAAAATGTTGTCAAGTAG+CGG | - | chr5_1:13149479-13149498 | Msa0718820:intron | 30.0% | |
| ! | CAGTAGAGTATTTAGTAGTT+TGG | - | chr5_1:13149772-13149791 | Msa0718820:intron | 30.0% |
| TTAAAAGCTAGTTATCAAGG+GGG | + | chr5_1:13149803-13149822 | None:intergenic | 30.0% | |
| CTTAAAAGCTAGTTATCAAG+GGG | + | chr5_1:13149804-13149823 | None:intergenic | 30.0% | |
| TTGATAAGTATTCAAGCACT+TGG | + | chr5_1:13149858-13149877 | None:intergenic | 30.0% | |
| CATCAAAAAGTAAAACGAAG+TGG | + | chr5_1:13150136-13150155 | None:intergenic | 30.0% | |
| ! | TTCTTGTGCATTTTATCAAG+GGG | + | chr5_1:13150229-13150248 | None:intergenic | 30.0% |
| ATCTCCCTCTTAATAATTGA+AGG | + | chr5_1:13150313-13150332 | None:intergenic | 30.0% | |
| CAATTATTAAGAGGGAGATA+TGG | - | chr5_1:13150314-13150333 | Msa0718820:intron | 30.0% | |
| GGGACAATAAAATTTGCAAA+AGG | - | chr5_1:13150425-13150444 | Msa0718820:CDS | 30.0% | |
| TTGCAAAAGGTCTTACATAT+AGG | - | chr5_1:13150438-13150457 | Msa0718820:CDS | 30.0% | |
| TGCAAAAGGTCTTACATATA+GGG | - | chr5_1:13150439-13150458 | Msa0718820:CDS | 30.0% | |
| AGATACTGCAAGTAATGTAT+AGG | + | chr5_1:13150582-13150601 | None:intergenic | 30.0% | |
| TGTTTGAATTCTGATACCAT+TGG | - | chr5_1:13150642-13150661 | Msa0718820:intron | 30.0% | |
| TTGTCCAGATGAAACAAATT+AGG | - | chr5_1:13150885-13150904 | Msa0718820:intron | 30.0% | |
| !! | ATTCACTTATGTTTCAGGTT+TGG | - | chr5_1:13151299-13151318 | Msa0718820:intron | 30.0% |
| AGGTTTGGATTGCTTAATAA+AGG | - | chr5_1:13151314-13151333 | Msa0718820:CDS | 30.0% | |
| GTTTATTTGAATAAGCTCTC+AGG | - | chr5_1:13151436-13151455 | Msa0718820:CDS | 30.0% | |
| ATAAAAACATAATTGGTGGG+TGG | + | chr5_1:13151495-13151514 | None:intergenic | 30.0% | |
| !! | ACCCACCAATTATGTTTTTA+TGG | - | chr5_1:13151494-13151513 | Msa0718820:CDS | 30.0% |
| CTCCATAAAAACATAATTGG+TGG | + | chr5_1:13151499-13151518 | None:intergenic | 30.0% | |
| TTGAATAAGAAATATGAGCC+TGG | - | chr5_1:13151773-13151792 | Msa0718820:intron | 30.0% | |
| TGAATAAGAAATATGAGCCT+GGG | - | chr5_1:13151774-13151793 | Msa0718820:intron | 30.0% | |
| !! | ACTCTCTAAAATCGATATCA+GGG | + | chr5_1:13151955-13151974 | None:intergenic | 30.0% |
| !! | TACTCTCTAAAATCGATATC+AGG | + | chr5_1:13151956-13151975 | None:intergenic | 30.0% |
| TGACATTTATTAACCTCTGA+GGG | + | chr5_1:13152004-13152023 | None:intergenic | 30.0% | |
| TTGACATTTATTAACCTCTG+AGG | + | chr5_1:13152005-13152024 | None:intergenic | 30.0% | |
| TTTGATCCATTTAACTGTTG+GGG | - | chr5_1:13152237-13152256 | Msa0718820:intron | 30.0% | |
| ATTTACAGGTTTCAAAGACA+AGG | - | chr5_1:13152384-13152403 | Msa0718820:intron | 30.0% | |
| CTTAAACAGAACGCTAAAAT+TGG | + | chr5_1:13152415-13152434 | None:intergenic | 30.0% | |
| ATAAATAAATGCATGGCATC+AGG | + | chr5_1:13152492-13152511 | None:intergenic | 30.0% | |
| ATATCGTAATATATGTGACC+GGG | + | chr5_1:13152596-13152615 | None:intergenic | 30.0% | |
| TATGTTCATCGAAACACTAT+AGG | - | chr5_1:13152706-13152725 | Msa0718820:CDS | 30.0% | |
| ATGTTCATCGAAACACTATA+GGG | - | chr5_1:13152707-13152726 | Msa0718820:CDS | 30.0% | |
| AAACAGAAGATATTGAAAGG+CGG | - | chr5_1:13152741-13152760 | Msa0718820:five_prime_UTR | 30.0% | |
| ATGAATCACTGACACATTTA+TGG | + | chr5_1:13152860-13152879 | None:intergenic | 30.0% | |
| !! | TGTGCTTGTGCTTGTTATTA+TGG | + | chr5_1:13146319-13146338 | None:intergenic | 35.0% |
| TCATTGTGCAGTGAAAATCA+TGG | - | chr5_1:13146351-13146370 | Msa0718820:three_prime_UTR | 35.0% | |
| ATCTACACTGTTGTTATCGT+TGG | - | chr5_1:13146452-13146471 | Msa0718820:exon | 35.0% | |
| ATGTATTGTTGTCAGGACTT+AGG | - | chr5_1:13146699-13146718 | Msa0718820:intron | 35.0% | |
| AATGTATGGTCTATGAAGCA+CGG | - | chr5_1:13146782-13146801 | Msa0718820:intron | 35.0% | |
| TGATGAATGTGTGACAATGT+CGG | + | chr5_1:13146816-13146835 | None:intergenic | 35.0% | |
| CGTAAATTCTCATTGGATGT+CGG | + | chr5_1:13147144-13147163 | None:intergenic | 35.0% | |
| TGCAACTACACTAATAAAGC+AGG | + | chr5_1:13147465-13147484 | None:intergenic | 35.0% | |
| ! | AAAGTGTCATACACATGAAG+TGG | + | chr5_1:13147516-13147535 | None:intergenic | 35.0% |
| GTCAGTCTAAACTCTTTCAA+GGG | + | chr5_1:13147772-13147791 | None:intergenic | 35.0% | |
| GTTTAGACTGACCAAAGAAT+TGG | - | chr5_1:13147780-13147799 | Msa0718820:intron | 35.0% | |
| CCTTTGTTGAACCAATTCTT+TGG | + | chr5_1:13147794-13147813 | None:intergenic | 35.0% | |
| ! | CCAAAGAATTGGTTCAACAA+AGG | - | chr5_1:13147791-13147810 | Msa0718820:intron | 35.0% |
| TCATGGACTTTATTCTGACT+TGG | - | chr5_1:13147857-13147876 | Msa0718820:intron | 35.0% | |
| CATGGACTTTATTCTGACTT+GGG | - | chr5_1:13147858-13147877 | Msa0718820:intron | 35.0% | |
| GGAGTTTCCAATTATCTTGT+TGG | - | chr5_1:13147901-13147920 | Msa0718820:CDS | 35.0% | |
| ATGCTCACCAACAAGATAAT+TGG | + | chr5_1:13147911-13147930 | None:intergenic | 35.0% | |
| ! | AGCTATCCTAGAGAGTTTTA+AGG | + | chr5_1:13148097-13148116 | None:intergenic | 35.0% |
| !! | ATTCTACCTTTTAGGTGCAA+TGG | - | chr5_1:13148261-13148280 | Msa0718820:intron | 35.0% |
| CTCCAACATTTCATAAGATG+GGG | - | chr5_1:13148374-13148393 | Msa0718820:CDS | 35.0% | |
| AACATTTCATAAGATGGGGA+GGG | - | chr5_1:13148378-13148397 | Msa0718820:CDS | 35.0% | |
| ! | ATAAACTCCATACTGCCTTT+TGG | - | chr5_1:13148415-13148434 | Msa0718820:CDS | 35.0% |
| TGTTGGTATAACTTGATCAC+TGG | + | chr5_1:13148713-13148732 | None:intergenic | 35.0% | |
| AGACTATCATCAACAACTGT+TGG | + | chr5_1:13148730-13148749 | None:intergenic | 35.0% | |
| !! | AACAGTTGTTGATGATAGTC+TGG | - | chr5_1:13148729-13148748 | Msa0718820:intron | 35.0% |
| ! | TTGATGATAGTCTGGAAGTT+TGG | - | chr5_1:13148737-13148756 | Msa0718820:intron | 35.0% |
| ATAAGCAGATTTAACATCCG+TGG | - | chr5_1:13148780-13148799 | Msa0718820:intron | 35.0% | |
| !! | AAGAGCATTGATTTGATCCA+CGG | + | chr5_1:13148800-13148819 | None:intergenic | 35.0% |
| AAACAAGTGCGTTAAAACGA+GGG | + | chr5_1:13148846-13148865 | None:intergenic | 35.0% | |
| AATTTAATCGCAGACTCTGT+AGG | + | chr5_1:13148961-13148980 | None:intergenic | 35.0% | |
| TACAGAGTCTGCGATTAAAT+TGG | - | chr5_1:13148960-13148979 | Msa0718820:intron | 35.0% | |
| CGATTAAATTGGCAAAGGAA+TGG | - | chr5_1:13148971-13148990 | Msa0718820:intron | 35.0% | |
| TAAATTGGCAAAGGAATGGA+TGG | - | chr5_1:13148975-13148994 | Msa0718820:intron | 35.0% | |
| TTGTGGCAGATGATAAGATA+TGG | - | chr5_1:13149004-13149023 | Msa0718820:intron | 35.0% | |
| TGTGGCAGATGATAAGATAT+GGG | - | chr5_1:13149005-13149024 | Msa0718820:intron | 35.0% | |
| GATAAGATATGGGATCAGAA+TGG | - | chr5_1:13149015-13149034 | Msa0718820:intron | 35.0% | |
| ! | TGGTCATACATATTTTGTCC+AGG | - | chr5_1:13149155-13149174 | Msa0718820:CDS | 35.0% |
| ! | CATACATATTTTGTCCAGGT+AGG | - | chr5_1:13149159-13149178 | Msa0718820:CDS | 35.0% |
| ! | TATCTCTGAAGGAATCTGAT+GGG | - | chr5_1:13149257-13149276 | Msa0718820:intron | 35.0% |
| ! | TTCCCTCTTGATAGCTATAA+AGG | - | chr5_1:13149359-13149378 | Msa0718820:intron | 35.0% |
| ! | TCCCTCTTGATAGCTATAAA+GGG | - | chr5_1:13149360-13149379 | Msa0718820:intron | 35.0% |
| TCCCTTTATAGCTATCAAGA+GGG | + | chr5_1:13149364-13149383 | None:intergenic | 35.0% | |
| GCTATTTAACAACACTGCTT+GGG | + | chr5_1:13149393-13149412 | None:intergenic | 35.0% | |
| AGCTATTTAACAACACTGCT+TGG | + | chr5_1:13149394-13149413 | None:intergenic | 35.0% | |
| ATACTACTCAATGTGAGACT+TGG | + | chr5_1:13149744-13149763 | None:intergenic | 35.0% | |
| CACACAACATTTCAATATGC+AGG | - | chr5_1:13150000-13150019 | Msa0718820:CDS | 35.0% | |
| GAGGATTATAGTATTCAGGT+GGG | + | chr5_1:13150074-13150093 | None:intergenic | 35.0% | |
| ATGCATATGTGTGAATACAC+TGG | - | chr5_1:13150153-13150172 | Msa0718820:CDS | 35.0% | |
| ! | TCTTGTGCATTTTATCAAGG+GGG | + | chr5_1:13150228-13150247 | None:intergenic | 35.0% |
| TTACTTGCAGTATCTGCTTA+TGG | - | chr5_1:13150587-13150606 | Msa0718820:intron | 35.0% | |
| TACTTGCAGTATCTGCTTAT+GGG | - | chr5_1:13150588-13150607 | Msa0718820:intron | 35.0% | |
| !!! | AACAAGCGTTTTGGAATAGA+TGG | + | chr5_1:13150714-13150733 | None:intergenic | 35.0% |
| AAGGGTAAAATGTGATCCAA+TGG | + | chr5_1:13150754-13150773 | None:intergenic | 35.0% | |
| !! | CAGTCCTAATTTGTTTCATC+TGG | + | chr5_1:13150892-13150911 | None:intergenic | 35.0% |
| !! | TCTCTTCTAGTTTGATTACG+TGG | - | chr5_1:13151264-13151283 | Msa0718820:intron | 35.0% |
| ! | CTCTGGAAGTTCATTTAACA+TGG | + | chr5_1:13151921-13151940 | None:intergenic | 35.0% |
| CATGTTAAATGAACTTCCAG+AGG | - | chr5_1:13151919-13151938 | Msa0718820:intron | 35.0% | |
| !! | CAGTGATGGATTATCAAGTA+TGG | + | chr5_1:13151981-13152000 | None:intergenic | 35.0% |
| ATTTCCAAAGCATAGCAATG+AGG | - | chr5_1:13152198-13152217 | Msa0718820:intron | 35.0% | |
| AAAGCATAGCAATGAGGAAA+CGG | - | chr5_1:13152204-13152223 | Msa0718820:intron | 35.0% | |
| TTGATCCATTTAACTGTTGG+GGG | - | chr5_1:13152238-13152257 | Msa0718820:intron | 35.0% | |
| CCACATGTTAGAATATGCTT+TGG | + | chr5_1:13152277-13152296 | None:intergenic | 35.0% | |
| CCAAAGCATATTCTAACATG+TGG | - | chr5_1:13152274-13152293 | Msa0718820:intron | 35.0% | |
| CTTCTTGCATTGAAGAAAAC+TGG | + | chr5_1:13152363-13152382 | None:intergenic | 35.0% | |
| !! | TCAATGCAAGAAGCATTTAC+AGG | - | chr5_1:13152370-13152389 | Msa0718820:intron | 35.0% |
| AAACGACTTAAACACTACAC+CGG | - | chr5_1:13152542-13152561 | Msa0718820:intron | 35.0% | |
| TTAAACACTACACCGGTATA+TGG | - | chr5_1:13152549-13152568 | Msa0718820:intron | 35.0% | |
| TGATCATCTTCAGAAGTTTG+AGG | + | chr5_1:13152656-13152675 | None:intergenic | 35.0% | |
| TGTTCATCGAAACACTATAG+GGG | - | chr5_1:13152708-13152727 | Msa0718820:CDS | 35.0% | |
| ACATCCTCAACATGGATAAA+GGG | + | chr5_1:13152888-13152907 | None:intergenic | 35.0% | |
| AACCAACAACATATGAGATG+AGG | - | chr5_1:13152995-13153014 | Msa0718820:intron | 35.0% | |
| GCTAGAAGTTTCTATTCAAG+AGG | - | chr5_1:13153062-13153081 | Msa0718820:intron | 35.0% | |
| ACTGCACAATGAAGAGAAGA+AGG | + | chr5_1:13146343-13146362 | None:intergenic | 40.0% | |
| !! | AATTTTTCAGATGGCGTGTG+AGG | - | chr5_1:13146397-13146416 | Msa0718820:three_prime_UTR | 40.0% |
| TAACAACAGTGTAGATCGTG+AGG | + | chr5_1:13146448-13146467 | None:intergenic | 40.0% | |
| ACTTGAAAGAGGAGGAAAAG+AGG | + | chr5_1:13146546-13146565 | None:intergenic | 40.0% | |
| AAAGGGTTACTTGAAAGAGG+AGG | + | chr5_1:13146554-13146573 | None:intergenic | 40.0% | |
| TTGTTGTCAGGACTTAGGAT+AGG | - | chr5_1:13146704-13146723 | Msa0718820:intron | 40.0% | |
| TTGAACGTACACACATGTGT+CGG | - | chr5_1:13146837-13146856 | Msa0718820:intron | 40.0% | |
| TCTGTAGCACATCTGATTGA+AGG | + | chr5_1:13146897-13146916 | None:intergenic | 40.0% | |
| ! | GCTCAACTAGTTTGAGCTAA+GGG | + | chr5_1:13146933-13146952 | None:intergenic | 40.0% |
| ! | AGCTCAACTAGTTTGAGCTA+AGG | + | chr5_1:13146934-13146953 | None:intergenic | 40.0% |
| AATTCTCATTGGATGTCGGT+TGG | + | chr5_1:13147140-13147159 | None:intergenic | 40.0% | |
| !! | GCAAATTGGTGGATTCTCAT+TGG | - | chr5_1:13147210-13147229 | Msa0718820:CDS | 40.0% |
| ATTGGATGTCAGTGTGACAT+TGG | - | chr5_1:13147228-13147247 | Msa0718820:intron | 40.0% | |
| TGCATCTTTCAACTACTCTC+TGG | - | chr5_1:13147481-13147500 | Msa0718820:intron | 40.0% | |
| ! | CTGAAAAGCATGCTAAGTCA+AGG | + | chr5_1:13147606-13147625 | None:intergenic | 40.0% |
| ! | CTTAGCATGCTTTTCAGATG+AGG | - | chr5_1:13147609-13147628 | Msa0718820:intron | 40.0% |
| ! | GCTTTTCAGATGAGGATTCT+CGG | - | chr5_1:13147617-13147636 | Msa0718820:intron | 40.0% |
| AGTCTAAACTCTTTCAAGGG+TGG | + | chr5_1:13147769-13147788 | None:intergenic | 40.0% | |
| GGTCAGTCTAAACTCTTTCA+AGG | + | chr5_1:13147773-13147792 | None:intergenic | 40.0% | |
| !! | CATGCATGCATTTCTAGCAA+GGG | + | chr5_1:13147976-13147995 | None:intergenic | 40.0% |
| GCTTATTTGAGCTTATCTGC+TGG | - | chr5_1:13148037-13148056 | Msa0718820:intron | 40.0% | |
| TTGTGTCCATTGCACCTAAA+AGG | + | chr5_1:13148270-13148289 | None:intergenic | 40.0% | |
| !! | TTGGAGGCACTTTATTGGAA+AGG | - | chr5_1:13148295-13148314 | Msa0718820:intron | 40.0% |
| !! | TGGAGGCACTTTATTGGAAA+GGG | - | chr5_1:13148296-13148315 | Msa0718820:intron | 40.0% |
| ! | ACTTTATTGGAAAGGGGTAC+CGG | - | chr5_1:13148303-13148322 | Msa0718820:intron | 40.0% |
| TGGCTGTTCATGTCAAAAAC+CGG | + | chr5_1:13148325-13148344 | None:intergenic | 40.0% | |
| CTCCCCATCTTATGAAATGT+TGG | + | chr5_1:13148379-13148398 | None:intergenic | 40.0% | |
| CAACATTTCATAAGATGGGG+AGG | - | chr5_1:13148377-13148396 | Msa0718820:CDS | 40.0% | |
| ATCAACAGTTCGACACCAAA+AGG | + | chr5_1:13148433-13148452 | None:intergenic | 40.0% | |
| GTTGATGTGTGATACTGACA+TGG | - | chr5_1:13148447-13148466 | Msa0718820:intron | 40.0% | |
| TGTGTGATACTGACATGGTT+TGG | - | chr5_1:13148452-13148471 | Msa0718820:intron | 40.0% | |
| !! | TACTGACATGGTTTGGTTGA+AGG | - | chr5_1:13148459-13148478 | Msa0718820:intron | 40.0% |
| AACGAGCAAGATATGGAAGT+GGG | + | chr5_1:13148666-13148685 | None:intergenic | 40.0% | |
| TAACGAGCAAGATATGGAAG+TGG | + | chr5_1:13148667-13148686 | None:intergenic | 40.0% | |
| GATGTTAAAACATCTGCTCC+GGG | + | chr5_1:13148691-13148710 | None:intergenic | 40.0% | |
| GGATGTTAAAACATCTGCTC+CGG | + | chr5_1:13148692-13148711 | None:intergenic | 40.0% | |
| AGTCTGGAAGTTTGGAAAGA+AGG | - | chr5_1:13148745-13148764 | Msa0718820:intron | 40.0% | |
| CAAACAAGTGCGTTAAAACG+AGG | + | chr5_1:13148847-13148866 | None:intergenic | 40.0% | |
| ! | GTCTCATTGAATAGTTGGTG+CGG | - | chr5_1:13148906-13148925 | Msa0718820:intron | 40.0% |
| GTCTGCGATTAAATTGGCAA+AGG | - | chr5_1:13148966-13148985 | Msa0718820:intron | 40.0% | |
| TGATATTGTCCACAGAGAGT+TGG | - | chr5_1:13149044-13149063 | Msa0718820:intron | 40.0% | |
| GATATTGTCCACAGAGAGTT+GGG | - | chr5_1:13149045-13149064 | Msa0718820:intron | 40.0% | |
| CCACTGCAAAAGATACTTGA+AGG | + | chr5_1:13149138-13149157 | None:intergenic | 40.0% | |
| ! | CCTTCAAGTATCTTTTGCAG+TGG | - | chr5_1:13149135-13149154 | Msa0718820:CDS | 40.0% |
| ! | GTATCTCTGAAGGAATCTGA+TGG | - | chr5_1:13149256-13149275 | Msa0718820:intron | 40.0% |
| ! | ATCTCTGAAGGAATCTGATG+GGG | - | chr5_1:13149258-13149277 | Msa0718820:intron | 40.0% |
| TACCACTCGATGTAGGAATT+AGG | + | chr5_1:13149303-13149322 | None:intergenic | 40.0% | |
| CTCCCTTTATAGCTATCAAG+AGG | + | chr5_1:13149365-13149384 | None:intergenic | 40.0% | |
| ACTTGAGAACAATGTTGTCG+CGG | + | chr5_1:13149566-13149585 | None:intergenic | 40.0% | |
| CTTGAATACGTATCAAAGCC+CGG | - | chr5_1:13149587-13149606 | Msa0718820:intron | 40.0% | |
| ! | GAGGCTTTACTCAGTCTTTT+CGG | + | chr5_1:13149653-13149672 | None:intergenic | 40.0% |
| !! | AAGAGAGGTGTTGTGATACT+TGG | - | chr5_1:13149704-13149723 | Msa0718820:intron | 40.0% |
| !! | AGAGAGGTGTTGTGATACTT+GGG | - | chr5_1:13149705-13149724 | Msa0718820:intron | 40.0% |
| ! | TTGTGATACTTGGGTGTCAT+GGG | - | chr5_1:13149714-13149733 | Msa0718820:intron | 40.0% |
| TATGTATCAGCAACTCAGGT+TGG | - | chr5_1:13149963-13149982 | Msa0718820:intron | 40.0% | |
| AATGTTGTGTGCACTGCATA+TGG | + | chr5_1:13149991-13150010 | None:intergenic | 40.0% | |
| TTTCAATATGCAGGCACAGA+AGG | - | chr5_1:13150009-13150028 | Msa0718820:CDS | 40.0% | |
| TATAGTATTCAGGTGGGTCA+TGG | + | chr5_1:13150068-13150087 | None:intergenic | 40.0% | |
| GGAGGATTATAGTATTCAGG+TGG | + | chr5_1:13150075-13150094 | None:intergenic | 40.0% | |
| CCAGGAGGATTATAGTATTC+AGG | + | chr5_1:13150078-13150097 | None:intergenic | 40.0% | |
| CCTGAATACTATAATCCTCC+TGG | - | chr5_1:13150075-13150094 | Msa0718820:CDS | 40.0% | |
| GTGGTGTTTCACTGAAATTG+AGG | + | chr5_1:13150117-13150136 | None:intergenic | 40.0% | |
| ATCGCAGTATAGATGAATGG+CGG | + | chr5_1:13150535-13150554 | None:intergenic | 40.0% | |
| AGCATCGCAGTATAGATGAA+TGG | + | chr5_1:13150538-13150557 | None:intergenic | 40.0% | |
| CAAGTCAATACGTGCATACT+TGG | + | chr5_1:13150785-13150804 | None:intergenic | 40.0% | |
| ! | ACTGGTGAGGACTATTTTCT+AGG | - | chr5_1:13150943-13150962 | Msa0718820:intron | 40.0% |
| TGATCCAAAGGACAGAGAAA+AGG | + | chr5_1:13151229-13151248 | None:intergenic | 40.0% | |
| TCCTTTGGATCATGTGTTTG+AGG | - | chr5_1:13151237-13151256 | Msa0718820:intron | 40.0% | |
| ACCTCAAACACATGATCCAA+AGG | + | chr5_1:13151241-13151260 | None:intergenic | 40.0% | |
| AAGGATTATTATGCCGGTGA+TGG | - | chr5_1:13151333-13151352 | Msa0718820:CDS | 40.0% | |
| AACACAAGTACTACCATCAC+CGG | + | chr5_1:13151349-13151368 | None:intergenic | 40.0% | |
| GGTGGATAGAAATTGAAGAG+CGG | + | chr5_1:13151477-13151496 | None:intergenic | 40.0% | |
| TTGATCCGTCCCCTTATATT+TGG | - | chr5_1:13151748-13151767 | Msa0718820:intron | 40.0% | |
| CAACTCCAAATATAAGGGGA+CGG | + | chr5_1:13151756-13151775 | None:intergenic | 40.0% | |
| GAATTCAGGTGAAAAAGTCG+TGG | - | chr5_1:13152098-13152117 | Msa0718820:intron | 40.0% | |
| GATGTTCACCTCTGTAAAGA+AGG | - | chr5_1:13152124-13152143 | Msa0718820:intron | 40.0% | |
| GTTTCCTCATTGCTATGCTT+TGG | + | chr5_1:13152205-13152224 | None:intergenic | 40.0% | |
| ATATACTGGGATGAGAAACC+TGG | - | chr5_1:13152614-13152633 | Msa0718820:CDS | 40.0% | |
| CATCTTCAGAAGTTTGAGGA+GGG | + | chr5_1:13152652-13152671 | None:intergenic | 40.0% | |
| TCATCTTCAGAAGTTTGAGG+AGG | + | chr5_1:13152653-13152672 | None:intergenic | 40.0% | |
| !! | TTCTGAAATTGACCTCACCA+AGG | + | chr5_1:13152683-13152702 | None:intergenic | 40.0% |
| ! | TCTTAGTCTTCACAACGAGT+TGG | + | chr5_1:13152775-13152794 | None:intergenic | 40.0% |
| ACACTTATTGAAGTCATGCC+CGG | - | chr5_1:13152831-13152850 | Msa0718820:intron | 40.0% | |
| ACTGACACATTTATGGACAC+CGG | + | chr5_1:13152853-13152872 | None:intergenic | 40.0% | |
| GACATCCTCAACATGGATAA+AGG | + | chr5_1:13152889-13152908 | None:intergenic | 40.0% | |
| !! | AAGTACTGACATCCTCAACA+TGG | + | chr5_1:13152896-13152915 | None:intergenic | 40.0% |
| AGGATGTCAGTACTTAGTTG+AGG | - | chr5_1:13152901-13152920 | Msa0718820:intron | 40.0% | |
| GGATGTCAGTACTTAGTTGA+GGG | - | chr5_1:13152902-13152921 | Msa0718820:intron | 40.0% | |
| AGCCTCATCTCATATGTTGT+TGG | + | chr5_1:13153000-13153019 | None:intergenic | 40.0% | |
| CTTCTACAACCTCTTCAGCT+TGG | - | chr5_1:13146519-13146538 | Msa0718820:CDS | 45.0% | |
| AAAAGAGGACCAAGCTGAAG+AGG | + | chr5_1:13146531-13146550 | None:intergenic | 45.0% | |
| CAGATGTGCTACAGAGTGTA+TGG | - | chr5_1:13146902-13146921 | Msa0718820:intron | 45.0% | |
| !!! | TCGACACATTTTGGAGCTCA+GGG | + | chr5_1:13147705-13147724 | None:intergenic | 45.0% |
| ! | CAGGCTTTCTCGACACATTT+TGG | + | chr5_1:13147714-13147733 | None:intergenic | 45.0% |
| CGAGGAGGAACATTCAAAAC+AGG | + | chr5_1:13147733-13147752 | None:intergenic | 45.0% | |
| ! | GGCATCTTTTTATTGCGAGG+AGG | + | chr5_1:13147748-13147767 | None:intergenic | 45.0% |
| ! | GGTGGCATCTTTTTATTGCG+AGG | + | chr5_1:13147751-13147770 | None:intergenic | 45.0% |
| !! | CCATGCATGCATTTCTAGCA+AGG | + | chr5_1:13147977-13147996 | None:intergenic | 45.0% |
| CCTTGCTAGAAATGCATGCA+TGG | - | chr5_1:13147974-13147993 | Msa0718820:CDS | 45.0% | |
| AGACTAGGGCCTGTTTCAAT+TGG | - | chr5_1:13148015-13148034 | Msa0718820:intron | 45.0% | |
| !! | GGAGGCACTTTATTGGAAAG+GGG | - | chr5_1:13148297-13148316 | Msa0718820:intron | 45.0% |
| CAACATCCATGGTGCTCATA+TGG | + | chr5_1:13148345-13148364 | None:intergenic | 45.0% | |
| CATATGAGCACCATGGATGT+TGG | - | chr5_1:13148343-13148362 | Msa0718820:intron | 45.0% | |
| TTCGACACCAAAAGGCAGTA+TGG | + | chr5_1:13148425-13148444 | None:intergenic | 45.0% | |
| CCATATCTTGCTCGTTATCC+CGG | - | chr5_1:13148670-13148689 | Msa0718820:intron | 45.0% | |
| ACTGTTAACTAGGTCCTACC+TGG | + | chr5_1:13149176-13149195 | None:intergenic | 45.0% | |
| AAGGAATCTGATGGGGACTT+GGG | - | chr5_1:13149265-13149284 | Msa0718820:intron | 45.0% | |
| TGATGGGGACTTGGGTATTA+TGG | - | chr5_1:13149273-13149292 | Msa0718820:intron | 45.0% | |
| TGCCTAATTCCTACATCGAG+TGG | - | chr5_1:13149298-13149317 | Msa0718820:intron | 45.0% | |
| CGTAACATACCACTCGATGT+AGG | + | chr5_1:13149310-13149329 | None:intergenic | 45.0% | |
| AACAATGTTGTCGCGGATAG+CGG | + | chr5_1:13149559-13149578 | None:intergenic | 45.0% | |
| TTAGAAAGGGCTACCTATGG+AGG | - | chr5_1:13149621-13149640 | Msa0718820:intron | 45.0% | |
| !! | TTTTCGGTTAGCTCCTCCAT+AGG | + | chr5_1:13149637-13149656 | None:intergenic | 45.0% |
| !! | GAGACTTCAGCTCTAAAGAG+AGG | - | chr5_1:13149689-13149708 | Msa0718820:intron | 45.0% |
| GTTGTGATACTTGGGTGTCA+TGG | - | chr5_1:13149713-13149732 | Msa0718820:intron | 45.0% | |
| ! | TGTGATACTTGGGTGTCATG+GGG | - | chr5_1:13149715-13149734 | Msa0718820:intron | 45.0% |
| AGGGTATGTATCAGCAACTC+AGG | - | chr5_1:13149959-13149978 | Msa0718820:intron | 45.0% | |
| AAAGCATGGCTTCTCGTAGT+CGG | + | chr5_1:13150044-13150063 | None:intergenic | 45.0% | |
| GGTCTTACATAGAGGAACAG+AGG | + | chr5_1:13150207-13150226 | None:intergenic | 45.0% | |
| ATCAAGGGGGTCTTACATAG+AGG | + | chr5_1:13150215-13150234 | None:intergenic | 45.0% | |
| ! | ATGAATGGCGGGAAACTGAA+TGG | + | chr5_1:13150523-13150542 | None:intergenic | 45.0% |
| TCGCAGTATAGATGAATGGC+GGG | + | chr5_1:13150534-13150553 | None:intergenic | 45.0% | |
| CTAAATGACAAGAAACCCCC+TGG | + | chr5_1:13150690-13150709 | None:intergenic | 45.0% | |
| ! | CAGGGGGTTTCTTGTCATTT+AGG | - | chr5_1:13150688-13150707 | Msa0718820:CDS | 45.0% |
| ! | CCAAAACGCTTGTTGCTAAG+CGG | - | chr5_1:13150720-13150739 | Msa0718820:CDS | 45.0% |
| ! | CTAAGCGGAAAGCATACCAT+TGG | - | chr5_1:13150735-13150754 | Msa0718820:CDS | 45.0% |
| TTCCCTTCTGAACAGAACAC+TGG | - | chr5_1:13150925-13150944 | Msa0718820:intron | 45.0% | |
| CACCAGTGTTCTGTTCAGAA+GGG | + | chr5_1:13150930-13150949 | None:intergenic | 45.0% | |
| TCACCAGTGTTCTGTTCAGA+AGG | + | chr5_1:13150931-13150950 | None:intergenic | 45.0% | |
| TTCTGAACAGAACACTGGTG+AGG | - | chr5_1:13150930-13150949 | Msa0718820:intron | 45.0% | |
| TTTAGGTCATGCCTCCACTA+TGG | - | chr5_1:13151140-13151159 | Msa0718820:intron | 45.0% | |
| CTATCAATCCTGCACCATAG+TGG | + | chr5_1:13151157-13151176 | None:intergenic | 45.0% | |
| CACTATGGTGCAGGATTGAT+AGG | - | chr5_1:13151155-13151174 | Msa0718820:intron | 45.0% | |
| ATAGACCCCTTCAAAACACC+TGG | + | chr5_1:13151196-13151215 | None:intergenic | 45.0% | |
| ! | ACAGCCTTTTCTCTGTCCTT+TGG | - | chr5_1:13151222-13151241 | Msa0718820:intron | 45.0% |
| ACAGTAACTGACTGACCAAG+GGG | + | chr5_1:13151656-13151675 | None:intergenic | 45.0% | |
| GACAGTAACTGACTGACCAA+GGG | + | chr5_1:13151657-13151676 | None:intergenic | 45.0% | |
| TGACAGTAACTGACTGACCA+AGG | + | chr5_1:13151658-13151677 | None:intergenic | 45.0% | |
| ACCTTAGATGAGAGTAGTCG+TGG | - | chr5_1:13151702-13151721 | Msa0718820:intron | 45.0% | |
| ACCACGACTACTCTCATCTA+AGG | + | chr5_1:13151706-13151725 | None:intergenic | 45.0% | |
| GACGGATCAAGTCTATAGAG+TGG | + | chr5_1:13151738-13151757 | None:intergenic | 45.0% | |
| AATATGAGCCTGGGTCAACT+TGG | - | chr5_1:13151783-13151802 | Msa0718820:intron | 45.0% | |
| ! | AATCTCTTCCAAGTTGACCC+AGG | + | chr5_1:13151794-13151813 | None:intergenic | 45.0% |
| GAACTTCCAGAGGAAGAGTT+TGG | - | chr5_1:13151929-13151948 | Msa0718820:intron | 45.0% | |
| ATCTCTGCTGAAGTTATGCC+TGG | - | chr5_1:13152069-13152088 | Msa0718820:intron | 45.0% | |
| TCTCTGCTGAAGTTATGCCT+GGG | - | chr5_1:13152070-13152089 | Msa0718820:intron | 45.0% | |
| ATGCCTGGGTTCTTGAATTC+AGG | - | chr5_1:13152084-13152103 | Msa0718820:intron | 45.0% | |
| TCACCTGAATTCAAGAACCC+AGG | + | chr5_1:13152090-13152109 | None:intergenic | 45.0% | |
| CTTGGGTTCCTTCTTTACAG+AGG | + | chr5_1:13152135-13152154 | None:intergenic | 45.0% | |
| GTACTCCCCCAACAGTTAAA+TGG | + | chr5_1:13152174-13152193 | None:intergenic | 45.0% | |
| CAGGTTTCAAAGACAAGGCA+AGG | - | chr5_1:13152389-13152408 | Msa0718820:intron | 45.0% | |
| AAATGCATGGCATCAGGACA+TGG | + | chr5_1:13152486-13152505 | None:intergenic | 45.0% | |
| GGTCACACAACACCATATAC+CGG | + | chr5_1:13152564-13152583 | None:intergenic | 45.0% | |
| TCAGAAGTTTGAGGAGGGAT+TGG | + | chr5_1:13152647-13152666 | None:intergenic | 45.0% | |
| GAAATTGACCTCACCAAGGT+GGG | + | chr5_1:13152679-13152698 | None:intergenic | 45.0% | |
| TGAAATTGACCTCACCAAGG+TGG | + | chr5_1:13152680-13152699 | None:intergenic | 45.0% | |
| CTGACACATTTATGGACACC+GGG | + | chr5_1:13152852-13152871 | None:intergenic | 45.0% | |
| TACGCCCTTTATCCATGTTG+AGG | - | chr5_1:13152881-13152900 | Msa0718820:intron | 45.0% | |
| ! | TGAGATGAGGCTGCAGTTTT+TGG | - | chr5_1:13153008-13153027 | Msa0718820:intron | 45.0% |
| GTGTAGATCGTGAGGAAGAG+AGG | + | chr5_1:13146440-13146459 | None:intergenic | 50.0% | |
| ACATGACACATGTCCGACAC+AGG | - | chr5_1:13146866-13146885 | Msa0718820:intron | 50.0% | |
| ! | ATTGAAGGCGTGTCCTGTGT+CGG | + | chr5_1:13146882-13146901 | None:intergenic | 50.0% |
| ! | GGATGTCGGTTGGACTTACA+TGG | + | chr5_1:13147130-13147149 | None:intergenic | 50.0% |
| !!! | CTCGACACATTTTGGAGCTC+AGG | + | chr5_1:13147706-13147725 | None:intergenic | 50.0% |
| GAACAGCCATATGAGCACCA+TGG | - | chr5_1:13148336-13148355 | Msa0718820:intron | 50.0% | |
| CCGGGATAACGAGCAAGATA+TGG | + | chr5_1:13148673-13148692 | None:intergenic | 50.0% | |
| GTTGGTGCGGCCTACAATAT+AGG | - | chr5_1:13148919-13148938 | Msa0718820:intron | 50.0% | |
| GGAATGGATGGAACTGCTTG+TGG | - | chr5_1:13148987-13149006 | Msa0718820:intron | 50.0% | |
| GAAGGAATCTGATGGGGACT+TGG | - | chr5_1:13149264-13149283 | Msa0718820:intron | 50.0% | |
| TTTCTAAGCCACCAACGACC+GGG | + | chr5_1:13149608-13149627 | None:intergenic | 50.0% | |
| CTTTCTAAGCCACCAACGAC+CGG | + | chr5_1:13149609-13149628 | None:intergenic | 50.0% | |
| !! | GGTCGTTGGTGGCTTAGAAA+GGG | - | chr5_1:13149608-13149627 | Msa0718820:intron | 50.0% |
| GGCTTAGAAAGGGCTACCTA+TGG | - | chr5_1:13149618-13149637 | Msa0718820:intron | 50.0% | |
| TAGAGCTGAAGTCTCAGCAG+CGG | + | chr5_1:13149684-13149703 | None:intergenic | 50.0% | |
| AGGTGGGTCATGGAAAAGCA+TGG | + | chr5_1:13150058-13150077 | None:intergenic | 50.0% | |
| ! | CCGCTTAGCAACAAGCGTTT+TGG | + | chr5_1:13150723-13150742 | None:intergenic | 50.0% |
| TCAATCCTGCACCATAGTGG+AGG | + | chr5_1:13151154-13151173 | None:intergenic | 50.0% | |
| GGTGCAGGATTGATAGGCTA+TGG | - | chr5_1:13151161-13151180 | Msa0718820:intron | 50.0% | |
| !! | TCCCCATCCAGGTGTTTTGA+AGG | - | chr5_1:13151186-13151205 | Msa0718820:intron | 50.0% |
| CCCTTCAAAACACCTGGATG+GGG | + | chr5_1:13151190-13151209 | None:intergenic | 50.0% | |
| !! | CCCCATCCAGGTGTTTTGAA+GGG | - | chr5_1:13151187-13151206 | Msa0718820:intron | 50.0% |
| CCCCTTCAAAACACCTGGAT+GGG | + | chr5_1:13151191-13151210 | None:intergenic | 50.0% | |
| !!! | CCCATCCAGGTGTTTTGAAG+GGG | - | chr5_1:13151188-13151207 | Msa0718820:intron | 50.0% |
| ACCCCTTCAAAACACCTGGA+TGG | + | chr5_1:13151192-13151211 | None:intergenic | 50.0% | |
| AGCTCTCAGGACAGCTTATG+AGG | - | chr5_1:13151449-13151468 | Msa0718820:CDS | 50.0% | |
| TATTTACCCAAACGCCCCCT+TGG | - | chr5_1:13151638-13151657 | Msa0718820:intron | 50.0% | |
| CAGTAACTGACTGACCAAGG+GGG | + | chr5_1:13151655-13151674 | None:intergenic | 50.0% | |
| TAATCCATCACTGCCCTCAG+AGG | - | chr5_1:13151988-13152007 | Msa0718820:intron | 50.0% | |
| ! | TTAACCTCTGAGGGCAGTGA+TGG | + | chr5_1:13151995-13152014 | None:intergenic | 50.0% |
| ! | TATGTGACCGGGAGTGTGAT+CGG | + | chr5_1:13152585-13152604 | None:intergenic | 50.0% |
| ACTGGGATGAGAAACCTGGA+TGG | - | chr5_1:13152618-13152637 | Msa0718820:CDS | 50.0% | |
| CTGAAGATGATCACCCACCT+TGG | - | chr5_1:13152663-13152682 | Msa0718820:CDS | 50.0% | |
| TTGGAGCTCAGGGAAAGCAG+AGG | + | chr5_1:13147695-13147714 | None:intergenic | 55.0% | |
| TGAGCACCATGGATGTTGGC+TGG | - | chr5_1:13148347-13148366 | Msa0718820:intron | 55.0% | |
| ! | GAGCACCATGGATGTTGGCT+GGG | - | chr5_1:13148348-13148367 | Msa0718820:intron | 55.0% |
| ! | AGCACCATGGATGTTGGCTG+GGG | - | chr5_1:13148349-13148368 | Msa0718820:intron | 55.0% |
| AGAACCCCAGCCAACATCCA+TGG | + | chr5_1:13148356-13148375 | None:intergenic | 55.0% | |
| CCACAGAGAGTTGGGACCAT+CGG | - | chr5_1:13149053-13149072 | Msa0718820:CDS | 55.0% | |
| ACGTATCAAAGCCCGGTCGT+TGG | - | chr5_1:13149594-13149613 | Msa0718820:intron | 55.0% | |
| TATCAAAGCCCGGTCGTTGG+TGG | - | chr5_1:13149597-13149616 | Msa0718820:intron | 55.0% | |
| !! | CGGTCGTTGGTGGCTTAGAA+AGG | - | chr5_1:13149607-13149626 | Msa0718820:intron | 55.0% |
| TCATGCCTCCACTATGGTGC+AGG | - | chr5_1:13151146-13151165 | Msa0718820:intron | 55.0% | |
| AGGCTATGGTTTCCCCATCC+AGG | - | chr5_1:13151175-13151194 | Msa0718820:intron | 55.0% | |
| TCAGGGCCAAACTCTTCCTC+TGG | + | chr5_1:13151938-13151957 | None:intergenic | 55.0% | |
| TGTGTGACCGATCACACTCC+CGG | - | chr5_1:13152575-13152594 | Msa0718820:intron | 55.0% | |
| GATGATCACCCACCTTGGTG+AGG | - | chr5_1:13152668-13152687 | Msa0718820:CDS | 55.0% | |
| CCGATGGTCCCAACTCTCTG+TGG | + | chr5_1:13149056-13149075 | None:intergenic | 60.0% | |
| ! | GTTGGGACCATCGGTTGACG+AGG | - | chr5_1:13149062-13149081 | Msa0718820:CDS | 60.0% |
| CCACTGTCCTCGTCAACCGA+TGG | + | chr5_1:13149072-13149091 | None:intergenic | 60.0% | |
| ! | CCATCGGTTGACGAGGACAG+TGG | - | chr5_1:13149069-13149088 | Msa0718820:CDS | 60.0% |
| CTCAGCAGCGGCAGTCAATG+AGG | + | chr5_1:13149672-13149691 | None:intergenic | 60.0% | |
| GCATGGCTTCTCGTAGTCGG+TGG | + | chr5_1:13150041-13150060 | None:intergenic | 60.0% | |
| !! | GACTGACCAAGGGGGCGTTT+GGG | + | chr5_1:13151647-13151666 | None:intergenic | 60.0% |
| !! | TGACTGACCAAGGGGGCGTT+TGG | + | chr5_1:13151648-13151667 | None:intergenic | 60.0% |
| !! | GGAGGGATTGGCTTCCATCC+AGG | + | chr5_1:13152635-13152654 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 13145987 | 13153157 | 13145987 | ID=Msa0718820;Name=Msa0718820 |
| chr5_1 | mRNA | 13145987 | 13153157 | 13145987 | ID=Msa0718820-mRNA-1;Parent=Msa0718820;Name=Msa0718820-mRNA-1;_AED=0.16;_eAED=0.16;_QI=96|0.76|0.71|1|0.76|0.71|14|469|550 |
| chr5_1 | exon | 13145987 | 13146623 | 13145987 | ID=Msa0718820-mRNA-1:exon:5398;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13146817 | 13146825 | 13146817 | ID=Msa0718820-mRNA-1:exon:5397;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13146919 | 13147038 | 13146919 | ID=Msa0718820-mRNA-1:exon:5396;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13147135 | 13147233 | 13147135 | ID=Msa0718820-mRNA-1:exon:5395;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13147886 | 13147999 | 13147886 | ID=Msa0718820-mRNA-1:exon:5394;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13148198 | 13148251 | 13148198 | ID=Msa0718820-mRNA-1:exon:5393;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13148359 | 13148453 | 13148359 | ID=Msa0718820-mRNA-1:exon:5392;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13149048 | 13149183 | 13149048 | ID=Msa0718820-mRNA-1:exon:5391;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13149968 | 13150179 | 13149968 | ID=Msa0718820-mRNA-1:exon:5390;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13150378 | 13150483 | 13150378 | ID=Msa0718820-mRNA-1:exon:5389;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13150664 | 13150827 | 13150664 | ID=Msa0718820-mRNA-1:exon:5388;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13151300 | 13151518 | 13151300 | ID=Msa0718820-mRNA-1:exon:5387;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13152581 | 13152816 | 13152581 | ID=Msa0718820-mRNA-1:exon:5386;Parent=Msa0718820-mRNA-1 |
| chr5_1 | exon | 13153141 | 13153157 | 13153141 | ID=Msa0718820-mRNA-1:exon:5385;Parent=Msa0718820-mRNA-1 |
| chr5_1 | five_prime_UTR | 13153141 | 13153157 | 13153141 | ID=Msa0718820-mRNA-1:five_prime_utr;Parent=Msa0718820-mRNA-1 |
| chr5_1 | five_prime_UTR | 13152738 | 13152816 | 13152738 | ID=Msa0718820-mRNA-1:five_prime_utr;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13152581 | 13152737 | 13152581 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13151300 | 13151518 | 13151300 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13150664 | 13150827 | 13150664 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13150378 | 13150483 | 13150378 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13149968 | 13150179 | 13149968 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13149048 | 13149183 | 13149048 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13148359 | 13148453 | 13148359 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13148198 | 13148251 | 13148198 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13147886 | 13147999 | 13147886 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13147135 | 13147233 | 13147135 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13146919 | 13147038 | 13146919 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13146817 | 13146825 | 13146817 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | CDS | 13146456 | 13146623 | 13146456 | ID=Msa0718820-mRNA-1:cds;Parent=Msa0718820-mRNA-1 |
| chr5_1 | three_prime_UTR | 13145987 | 13146455 | 13145987 | ID=Msa0718820-mRNA-1:three_prime_utr;Parent=Msa0718820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
