AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1336750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336750 MtrunA17_Chr5g0408171 96.038 631 22 1 1 631 1 628 0.0 1262
Msa1336750 MtrunA17_Chr8g0369811 78.288 631 135 1 2 630 6 636 0.0 1032
Msa1336750 MtrunA17_Chr8g0367951 26.772 127 90 1 117 240 389 515 1.48e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336750 AT2G35610.1 73.302 633 162 1 5 630 11 643 0.0 970
Msa1336750 AT1G70630.2 29.375 160 109 2 85 240 238 397 3.49e-15 79.3
Msa1336750 AT1G70630.1 29.375 160 109 2 85 240 238 397 3.49e-15 79.3
Msa1336750 AT1G70630.5 29.375 160 109 2 85 240 207 366 3.77e-15 79.0
Msa1336750 AT1G70630.7 29.375 160 109 2 85 240 375 534 5.31e-15 79.0
Msa1336750 AT1G70630.6 29.375 160 109 2 85 240 444 603 5.36e-15 79.0
Msa1336750 AT1G70630.4 29.375 160 109 2 85 240 423 582 6.24e-15 79.0
Msa1336750 AT1G70630.3 29.375 160 109 2 85 240 454 613 6.90e-15 79.0

Find 191 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGCTTTCTCGACACATTT+TGG 0.152798 tig0001315:+31947 None:intergenic
AATTATTGGAGGCACTTTAT+TGG 0.160135 tig0001315:-31366 Msa1336750:CDS
ATGAATCACTGACACATTTA+TGG 0.176197 tig0001315:+26795 None:intergenic
TGCATACTTGGTAATTAATA+AGG 0.202143 tig0001315:+28882 None:intergenic
TTGCTTGTAATTAAAATAAT+AGG 0.226952 tig0001315:-26556 Msa1336750:three_prime_UTR
CTTCTTGCATTGAAGAAAAC+TGG 0.235009 tig0001315:+27292 None:intergenic
ATGCTCACCAACAAGATAAT+TGG 0.259758 tig0001315:+31750 None:intergenic
TACTCTCTAAAATCGATATC+AGG 0.263759 tig0001315:+27699 None:intergenic
AACATTGCAAATTAGAGAAT+TGG 0.271959 tig0001315:-26681 Msa1336750:three_prime_UTR
TTGTCCAGATGAAACAAATT+AGG 0.276729 tig0001315:-28767 Msa1336750:intron
TGCAATGGACACAAAATTAT+TGG 0.280229 tig0001315:-31380 Msa1336750:CDS
CCAGGAGGATTATAGTATTC+AGG 0.288957 tig0001315:+29577 None:intergenic
TATTTGATGCATTACAATCT+TGG 0.296555 tig0001315:+27502 None:intergenic
ACATATATTACGATATATAC+TGG 0.302979 tig0001315:-27052 Msa1336750:CDS
GACATCCTCAACATGGATAA+AGG 0.307970 tig0001315:+26766 None:intergenic
CCGCTTAGCAACAAGCGTTT+TGG 0.310588 tig0001315:+28932 None:intergenic
CCTTTGTTGAACCAATTCTT+TGG 0.316391 tig0001315:+31867 None:intergenic
ATTTGGTAACTATGCATTCA+TGG 0.333268 tig0001315:-31818 Msa1336750:CDS
TTGATGATAGTCTGGAAGTT+TGG 0.339802 tig0001315:-30919 Msa1336750:CDS
ATAAACTCCATACTGCCTTT+TGG 0.344303 tig0001315:-31241 Msa1336750:CDS
TACAGAGTCTGCGATTAAAT+TGG 0.349125 tig0001315:-30696 Msa1336750:CDS
TCAATGCAAGAAGCATTTAC+AGG 0.351618 tig0001315:-27282 Msa1336750:CDS
AGCCTCATCTCATATGTTGT+TGG 0.351863 tig0001315:+26655 None:intergenic
TTAAACACTACACCGGTATA+TGG 0.355690 tig0001315:-27103 Msa1336750:CDS
ATGTTCATCGAAACACTATA+GGG 0.371885 tig0001315:-26945 Msa1336750:three_prime_UTR
CATCAAATAATGTAACTGTT+GGG 0.379007 tig0001315:-27488 Msa1336750:CDS
GTTTAGACTGACCAAAGAAT+TGG 0.380928 tig0001315:-31878 Msa1336750:CDS
GGAGTTTCCAATTATCTTGT+TGG 0.383055 tig0001315:-31757 Msa1336750:intron
CAACATCCATGGTGCTCATA+TGG 0.383723 tig0001315:+31314 None:intergenic
ATTTGATGCATTACAATCTT+GGG 0.384536 tig0001315:+27503 None:intergenic
TTCTCCAACATTTCATAAGA+TGG 0.386465 tig0001315:-31284 Msa1336750:CDS
CAGTGATGGATTATCAAGTA+TGG 0.388316 tig0001315:+27674 None:intergenic
CCGGGATAACGAGCAAGATA+TGG 0.388736 tig0001315:+30986 None:intergenic
TATGTTCATCGAAACACTAT+AGG 0.390048 tig0001315:-26946 Msa1336750:three_prime_UTR
CACTATGGTGCAGGATTGAT+AGG 0.392370 tig0001315:-28497 Msa1336750:CDS
GTTTCCTCATTGCTATGCTT+TGG 0.396200 tig0001315:+27450 None:intergenic
AACATTATAATAGTTACATT+TGG 0.397598 tig0001315:-31835 Msa1336750:CDS
TCCTTTGGATCATGTGTTTG+AGG 0.399480 tig0001315:-28415 Msa1336750:intron
TCATGGACTTTATTCTGACT+TGG 0.401737 tig0001315:-31801 Msa1336750:CDS
GAACTTCCAGAGGAAGAGTT+TGG 0.403101 tig0001315:-27723 Msa1336750:CDS
GTTGGTGCGGCCTACAATAT+AGG 0.429061 tig0001315:-30737 Msa1336750:CDS
AACAGTTGTTGATGATAGTC+TGG 0.434242 tig0001315:-30927 Msa1336750:CDS
GGTCAGTCTAAACTCTTTCA+AGG 0.435148 tig0001315:+31888 None:intergenic
TTTAGGTCATGCCTCCACTA+TGG 0.437519 tig0001315:-28512 Msa1336750:intron
TTGTGGCAGATGATAAGATA+TGG 0.442083 tig0001315:-30652 Msa1336750:CDS
GCATACTTGGTAATTAATAA+GGG 0.442561 tig0001315:+28883 None:intergenic
CGAGGAGGAACATTCAAAAC+AGG 0.443521 tig0001315:+31928 None:intergenic
TGGAGGCACTTTATTGGAAA+GGG 0.444183 tig0001315:-31360 Msa1336750:CDS
GATATTGTCCACAGAGAGTT+GGG 0.444371 tig0001315:-30611 Msa1336750:CDS
TCAGAAGTTTGAGGAGGGAT+TGG 0.448194 tig0001315:+27008 None:intergenic
CCATATCTTGCTCGTTATCC+CGG 0.452515 tig0001315:-30986 Msa1336750:CDS
TTCGACACCAAAAGGCAGTA+TGG 0.454549 tig0001315:+31234 None:intergenic
CTCTGGAAGTTCATTTAACA+TGG 0.457114 tig0001315:+27734 None:intergenic
GGAGGGATTGGCTTCCATCC+AGG 0.457361 tig0001315:+27020 None:intergenic
GCATCAAATAATGTAACTGT+TGG 0.458070 tig0001315:-27489 Msa1336750:CDS
CCACTGCAAAAGATACTTGA+AGG 0.465347 tig0001315:+30521 None:intergenic
CTTCTACAACCTCTTCAGCT+TGG 0.465576 tig0001315:-33139 Msa1336750:CDS
ACATCCTCAACATGGATAAA+GGG 0.468668 tig0001315:+26767 None:intergenic
GGATGTTAAAACATCTGCTC+CGG 0.469326 tig0001315:+30967 None:intergenic
CAAAGAATTGGTTCAACAAA+GGG 0.478416 tig0001315:-31866 Msa1336750:CDS
TCTCCAACATTTCATAAGAT+GGG 0.482806 tig0001315:-31283 Msa1336750:CDS
AGGCTATGGTTTCCCCATCC+AGG 0.483154 tig0001315:-28477 Msa1336750:CDS
TCAGGGCCAAACTCTTCCTC+TGG 0.484951 tig0001315:+27717 None:intergenic
ACTTTATTGGAAAGGGGTAC+CGG 0.488262 tig0001315:-31353 Msa1336750:CDS
TACTGACATGGTTTGGTTGA+AGG 0.488688 tig0001315:-31197 Msa1336750:intron
CATGGACTTTATTCTGACTT+GGG 0.489839 tig0001315:-31800 Msa1336750:CDS
CGATTAAATTGGCAAAGGAA+TGG 0.490912 tig0001315:-30685 Msa1336750:CDS
TGTGTGATACTGACATGGTT+TGG 0.491270 tig0001315:-31204 Msa1336750:CDS
GGATGTCAGTACTTAGTTGA+GGG 0.492243 tig0001315:-26750 Msa1336750:three_prime_UTR
AGTCTGGAAGTTTGGAAAGA+AGG 0.492974 tig0001315:-30911 Msa1336750:intron
CTCCCCATCTTATGAAATGT+TGG 0.493611 tig0001315:+31280 None:intergenic
ATAAGATATGGGATCAGAAT+GGG 0.494577 tig0001315:-30640 Msa1336750:CDS
ATAAAAGGGTTACTTGAAAG+AGG 0.496404 tig0001315:+33104 None:intergenic
TTATGATGGAAATCTAAAGC+TGG 0.498264 tig0001315:-30552 Msa1336750:CDS
TGTTGGTATAACTTGATCAC+TGG 0.499076 tig0001315:+30946 None:intergenic
TTAACCTCTGAGGGCAGTGA+TGG 0.499809 tig0001315:+27660 None:intergenic
ATCAACAGTTCGACACCAAA+AGG 0.500021 tig0001315:+31226 None:intergenic
CCCCTTCAAAACACCTGGAT+GGG 0.500946 tig0001315:+28464 None:intergenic
GATGTTCACCTCTGTAAAGA+AGG 0.504544 tig0001315:-27528 Msa1336750:CDS
ACTGCACAATGAAGAGAAGA+AGG 0.505529 tig0001315:+33318 None:intergenic
TGAGCACCATGGATGTTGGC+TGG 0.508658 tig0001315:-31309 Msa1336750:CDS
TGATATTGTCCACAGAGAGT+TGG 0.510495 tig0001315:-30612 Msa1336750:CDS
GATAAGATATGGGATCAGAA+TGG 0.511259 tig0001315:-30641 Msa1336750:CDS
GGTGCAGGATTGATAGGCTA+TGG 0.512598 tig0001315:-28491 Msa1336750:CDS
TCATGCCTCCACTATGGTGC+AGG 0.513667 tig0001315:-28506 Msa1336750:CDS
ATCAAATAATGTAACTGTTG+GGG 0.514600 tig0001315:-27487 Msa1336750:CDS
GTTAAGCAATTGAATGATCT+CGG 0.516251 tig0001315:-31778 Msa1336750:CDS
TTGGAGGCACTTTATTGGAA+AGG 0.518007 tig0001315:-31361 Msa1336750:CDS
AATGTTGTGTGCACTGCATA+TGG 0.519394 tig0001315:+29664 None:intergenic
AGGGTATGTATCAGCAACTC+AGG 0.520087 tig0001315:-29693 Msa1336750:CDS
CACACAACATTTCAATATGC+AGG 0.521713 tig0001315:-29652 Msa1336750:CDS
TATATCGTAATATATGTGAC+CGG 0.524119 tig0001315:+27058 None:intergenic
TATAGTATTCAGGTGGGTCA+TGG 0.526762 tig0001315:+29587 None:intergenic
AAAGCATAGCAATGAGGAAA+CGG 0.527987 tig0001315:-27448 Msa1336750:intron
ATCTACACTGTTGTCATCGT+TGG 0.528331 tig0001315:-33206 Msa1336750:CDS
TAAATTGGCAAAGGAATGGA+TGG 0.528455 tig0001315:-30681 Msa1336750:CDS
GCTAGAAGTTTCTATTCAAG+AGG 0.528803 tig0001315:-26590 Msa1336750:three_prime_UTR
TCACCAGTGTTCTGTTCAGA+AGG 0.530066 tig0001315:+28724 None:intergenic
TGATCCAAAGGACAGAGAAA+AGG 0.530345 tig0001315:+28426 None:intergenic
TCATTGTGCAGTGAAAATCA+TGG 0.530386 tig0001315:-33307 Msa1336750:five_prime_UTR
ATATACTGGGATGAGAAACC+TGG 0.532396 tig0001315:-27038 Msa1336750:CDS
AATTTAATCGCAGACTCTGT+AGG 0.534019 tig0001315:+30698 None:intergenic
CCACAGAGAGTTGGGACCAT+CGG 0.535254 tig0001315:-30603 Msa1336750:CDS
CATCTTCAGAAGTTTGAGGA+GGG 0.537277 tig0001315:+27003 None:intergenic
AAAAGAGGACCAAGCTGAAG+AGG 0.545642 tig0001315:+33130 None:intergenic
TTTCAATATGCAGGCACAGA+AGG 0.546523 tig0001315:-29643 Msa1336750:CDS
GTCAGTCTAAACTCTTTCAA+GGG 0.548005 tig0001315:+31889 None:intergenic
TCTTAGTCTTCACAACGAGT+TGG 0.548375 tig0001315:+26880 None:intergenic
AGACTATCATCAACAACTGT+TGG 0.549115 tig0001315:+30929 None:intergenic
TGTGTGACCGATCACACTCC+CGG 0.550835 tig0001315:-27077 Msa1336750:CDS
GAGCACCATGGATGTTGGCT+GGG 0.551672 tig0001315:-31308 Msa1336750:CDS
CTGACACATTTATGGACACC+GGG 0.551803 tig0001315:+26803 None:intergenic
TACGCCCTTTATCCATGTTG+AGG 0.554675 tig0001315:-26771 Msa1336750:three_prime_UTR
CCTGAATACTATAATCCTCC+TGG 0.555188 tig0001315:-29577 Msa1336750:intron
ACACTTATTGAAGTCATGCC+CGG 0.556796 tig0001315:-26821 Msa1336750:three_prime_UTR
TATGATGGAAATCTAAAGCT+GGG 0.556906 tig0001315:-30551 Msa1336750:CDS
GTGTAGATCGTGAGGAAGAG+AGG 0.558247 tig0001315:+33221 None:intergenic
CATAAACAGAAGATATTGAA+AGG 0.558328 tig0001315:-26914 Msa1336750:three_prime_UTR
TATGTGACCGGGAGTGTGAT+CGG 0.558850 tig0001315:+27070 None:intergenic
CTAAGCGGAAAGCATACCAT+TGG 0.560834 tig0001315:-28917 Msa1336750:CDS
TATGTATCAGCAACTCAGGT+TGG 0.561264 tig0001315:-29689 Msa1336750:CDS
ACTTGAAAGAGGAGGAAAAG+AGG 0.562823 tig0001315:+33115 None:intergenic
ACCCCTTCAAAACACCTGGA+TGG 0.563163 tig0001315:+28463 None:intergenic
AAGGGTAAAATGTGATCCAA+TGG 0.568807 tig0001315:+28901 None:intergenic
TGATCATCTTCAGAAGTTTG+AGG 0.571519 tig0001315:+26999 None:intergenic
AGCACCATGGATGTTGGCTG+GGG 0.572999 tig0001315:-31307 Msa1336750:CDS
AGGATGTCAGTACTTAGTTG+AGG 0.574833 tig0001315:-26751 Msa1336750:three_prime_UTR
CCCTTCAAAACACCTGGATG+GGG 0.576084 tig0001315:+28465 None:intergenic
GATGTTAAAACATCTGCTCC+GGG 0.576359 tig0001315:+30968 None:intergenic
CTGAAGATGATCACCCACCT+TGG 0.580153 tig0001315:-26989 Msa1336750:CDS
ACCTCAAACACATGATCCAA+AGG 0.580442 tig0001315:+28414 None:intergenic
TGACATTTATTAACCTCTGA+GGG 0.581541 tig0001315:+27651 None:intergenic
ACTGACACATTTATGGACAC+CGG 0.582245 tig0001315:+26802 None:intergenic
CCAAAGAATTGGTTCAACAA+AGG 0.582324 tig0001315:-31867 Msa1336750:CDS
ACTCTCTAAAATCGATATCA+GGG 0.584688 tig0001315:+27700 None:intergenic
TTGACATTTATTAACCTCTG+AGG 0.585437 tig0001315:+27650 None:intergenic
TAACGAGCAAGATATGGAAG+TGG 0.588038 tig0001315:+30992 None:intergenic
TGTGGCAGATGATAAGATAT+GGG 0.588167 tig0001315:-30651 Msa1336750:CDS
CTCCAACATTTCATAAGATG+GGG 0.588837 tig0001315:-31282 Msa1336750:CDS
AACATTTCATAAGATGGGGA+GGG 0.590957 tig0001315:-31278 Msa1336750:CDS
CATATATTACGATATATACT+GGG 0.592955 tig0001315:-27051 Msa1336750:CDS
CAACATTTCATAAGATGGGG+AGG 0.592995 tig0001315:-31279 Msa1336750:CDS
GGAGGATTATAGTATTCAGG+TGG 0.593240 tig0001315:+29580 None:intergenic
CTTGGGTTCCTTCTTTACAG+AGG 0.594617 tig0001315:+27520 None:intergenic
GAAATTGACCTCACCAAGGT+GGG 0.595017 tig0001315:+26976 None:intergenic
ATAGACCCCTTCAAAACACC+TGG 0.595066 tig0001315:+28459 None:intergenic
ATTTACAGGTTTCAAAGACA+AGG 0.595211 tig0001315:-27268 Msa1336750:intron
TGTAGAAGAATAGTGTATAG+CGG 0.596162 tig0001315:+33154 None:intergenic
CTATCAATCCTGCACCATAG+TGG 0.596448 tig0001315:+28498 None:intergenic
CCAAAACGCTTGTTGCTAAG+CGG 0.599022 tig0001315:-28932 Msa1336750:CDS
CATATGAGCACCATGGATGT+TGG 0.603158 tig0001315:-31313 Msa1336750:CDS
AATGGACACAAAATTATTGG+AGG 0.604541 tig0001315:-31377 Msa1336750:CDS
AGAACCCCAGCCAACATCCA+TGG 0.605293 tig0001315:+31303 None:intergenic
GTCTCATTGAATAGTTGGTG+CGG 0.605394 tig0001315:-30750 Msa1336750:intron
GTCTGCGATTAAATTGGCAA+AGG 0.607208 tig0001315:-30690 Msa1336750:CDS
TTCCCTTCTGAACAGAACAC+TGG 0.608871 tig0001315:-28727 Msa1336750:intron
GGAGGCACTTTATTGGAAAG+GGG 0.609745 tig0001315:-31359 Msa1336750:CDS
GGTCACACAACACCATATAC+CGG 0.614742 tig0001315:+27091 None:intergenic
CCGATGGTCCCAACTCTCTG+TGG 0.615254 tig0001315:+30603 None:intergenic
ATTTCCAAAGCATAGCAATG+AGG 0.615304 tig0001315:-27454 Msa1336750:CDS
AAAGCATGGCTTCTCGTAGT+CGG 0.615395 tig0001315:+29611 None:intergenic
AACGAGCAAGATATGGAAGT+GGG 0.615612 tig0001315:+30993 None:intergenic
CACCAGTGTTCTGTTCAGAA+GGG 0.620203 tig0001315:+28725 None:intergenic
CCACTGTCCTCGTCAACCGA+TGG 0.622308 tig0001315:+30587 None:intergenic
GGAATGGATGGAACTGCTTG+TGG 0.631261 tig0001315:-30669 Msa1336750:CDS
TCATCTTCAGAAGTTTGAGG+AGG 0.634318 tig0001315:+27002 None:intergenic
TCAAATAATGTAACTGTTGG+GGG 0.638239 tig0001315:-27486 Msa1336750:CDS
AGGTGGGTCATGGAAAAGCA+TGG 0.640006 tig0001315:+29597 None:intergenic
TCAATCCTGCACCATAGTGG+AGG 0.641393 tig0001315:+28501 None:intergenic
AAAGGGTTACTTGAAAGAGG+AGG 0.644273 tig0001315:+33107 None:intergenic
ATATCGTAATATATGTGACC+GGG 0.644860 tig0001315:+27059 None:intergenic
GTTGGGACCATCGGTTGACG+AGG 0.646860 tig0001315:-30594 Msa1336750:CDS
TGAAATTGACCTCACCAAGG+TGG 0.650431 tig0001315:+26975 None:intergenic
TGTTCATCGAAACACTATAG+GGG 0.651954 tig0001315:-26944 Msa1336750:three_prime_UTR
AAGTACTGACATCCTCAACA+TGG 0.653072 tig0001315:+26759 None:intergenic
AACCAACAACATATGAGATG+AGG 0.654141 tig0001315:-26657 Msa1336750:three_prime_UTR
ACTGGGATGAGAAACCTGGA+TGG 0.657363 tig0001315:-27034 Msa1336750:CDS
GATGATCACCCACCTTGGTG+AGG 0.658622 tig0001315:-26984 Msa1336750:exon
TAATCCATCACTGCCCTCAG+AGG 0.663209 tig0001315:-27664 Msa1336750:intron
CCATCGGTTGACGAGGACAG+TGG 0.663505 tig0001315:-30587 Msa1336750:CDS
AGTCTAAACTCTTTCAAGGG+TGG 0.663897 tig0001315:+31892 None:intergenic
TTGGAGCTCAGGGAAAGCAG+AGG 0.666154 tig0001315:+31966 None:intergenic
GCATGGCTTCTCGTAGTCGG+TGG 0.666555 tig0001315:+29614 None:intergenic
TGACAACAGTGTAGATCGTG+AGG 0.668405 tig0001315:+33213 None:intergenic
AAACGACTTAAACACTACAC+CGG 0.668427 tig0001315:-27110 Msa1336750:CDS
CATGTTAAATGAACTTCCAG+AGG 0.669463 tig0001315:-27733 Msa1336750:CDS
GTTGATGTGTGATACTGACA+TGG 0.689315 tig0001315:-31209 Msa1336750:CDS
GAGGATTATAGTATTCAGGT+GGG 0.690958 tig0001315:+29581 None:intergenic
GAACAGCCATATGAGCACCA+TGG 0.702964 tig0001315:-31320 Msa1336750:CDS
AAACAGAAGATATTGAAAGG+CGG 0.715428 tig0001315:-26911 Msa1336750:three_prime_UTR
TTCTGAAATTGACCTCACCA+AGG 0.719723 tig0001315:+26972 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTGTAAAAGATTTAAAA+TGG - tig0001315:26633-26652 Msa1336750:three_prime_UTR 10.0%
!! TTATAATCAAACATATATTA+AGG + tig0001315:29029-29048 None:intergenic 10.0%
!! AAAAAAAACTAAAAAAAGAT+AGG - tig0001315:30361-30380 Msa1336750:intron 10.0%
!! AAAAAAACTAAAAAAAGATA+GGG - tig0001315:30362-30381 Msa1336750:intron 10.0%
!!! TTTGGATTAAATCTTTTTTT+TGG + tig0001315:26728-26747 None:intergenic 15.0%
!! ACTAAATTATTGATGTATAT+TGG + tig0001315:26814-26833 None:intergenic 15.0%
!! AATATACATCAATAATTTAG+TGG - tig0001315:26813-26832 Msa1336750:three_prime_UTR 15.0%
!! ATGTAAAATAGAATAAAAAG+AGG + tig0001315:27113-27132 None:intergenic 15.0%
!!! TACATATCAAATTCTAAAAA+GGG + tig0001315:27212-27231 None:intergenic 15.0%
!!! ATACATATCAAATTCTAAAA+AGG + tig0001315:27213-27232 None:intergenic 15.0%
!! TATTAACGATACATTATAAA+CGG + tig0001315:27495-27514 None:intergenic 15.0%
!!! TTTAATTAGTATGCATTTTT+TGG - tig0001315:27566-27585 Msa1336750:intron 15.0%
!! TAATGATTAAAATGTAGTAA+TGG + tig0001315:27963-27982 None:intergenic 15.0%
!! AACATTATAATAGTTACATT+TGG - tig0001315:28351-28370 Msa1336750:intron 15.0%
!! ATAAACAACTAATTAAAAGA+AGG + tig0001315:28751-28770 None:intergenic 15.0%
!!! AATCAAATAATGGAATATTT+AGG + tig0001315:29162-29181 None:intergenic 15.0%
!! AATATTCCATTATTTGATTA+TGG - tig0001315:29163-29182 Msa1336750:intron 15.0%
!!! TAATAATTGAAGGATAATTT+TGG + tig0001315:30837-30856 None:intergenic 15.0%
!! TTAATTCTCTTCATTTAATT+AGG - tig0001315:30879-30898 Msa1336750:intron 15.0%
!! TAATTCTCTTCATTTAATTA+GGG - tig0001315:30880-30899 Msa1336750:intron 15.0%
!!! AAACATTTATTTTCATGAAA+AGG + tig0001315:31161-31180 None:intergenic 15.0%
!!! AAATGTTTTAATTTTTTTCC+AGG - tig0001315:31203-31222 Msa1336750:CDS 15.0%
!!! AATGTTTTAATTTTTTTCCA+GGG - tig0001315:31204-31223 Msa1336750:CDS 15.0%
!! AGTTCTTTATGTATATATTT+AGG - tig0001315:31657-31676 Msa1336750:intron 15.0%
!! TTATTCAAATAAACTGAAAA+CGG + tig0001315:31964-31983 None:intergenic 15.0%
!!! TCATTGTTTTAAATTTTGAT+TGG + tig0001315:32563-32582 None:intergenic 15.0%
!! GATTAAAATAAATAAATGCA+TGG + tig0001315:33033-33052 None:intergenic 15.0%
!!! TGCATTTATTTATTTTAATC+AGG - tig0001315:33033-33052 Msa1336750:intron 15.0%
!!! TTATTTATTTTAATCAGGAA+AGG - tig0001315:33038-33057 Msa1336750:intron 15.0%
!!! TATTTATTTTAATCAGGAAA+GGG - tig0001315:33039-33058 Msa1336750:intron 15.0%
!! TTGCTTGTAATTAAAATAAT+AGG - tig0001315:33630-33649 Msa1336750:intron 15.0%
!! AATGGAAGTAAAATTATACA+AGG - tig0001315:26651-26670 Msa1336750:three_prime_UTR 20.0%
!!! TAAATCTTTTTTTTGGTCAA+AGG + tig0001315:26721-26740 None:intergenic 20.0%
!!! TATCTTTTTTTGTTAGTTGT+TGG - tig0001315:27165-27184 Msa1336750:intron 20.0%
!!! TTGAAACTTGAAAATTGTTT+TGG - tig0001315:27276-27295 Msa1336750:CDS 20.0%
!!! TTTATGTTTCTTTTGAGAAA+TGG - tig0001315:27526-27545 Msa1336750:CDS 20.0%
!!! ATGCATTTTTTGGTATAAAA+AGG - tig0001315:27576-27595 Msa1336750:intron 20.0%
!!! TATAAAAAGGTTTAGTTTAC+TGG - tig0001315:27589-27608 Msa1336750:intron 20.0%
!! ATTTAGAAATAACTGCAAAT+TGG - tig0001315:27724-27743 Msa1336750:CDS 20.0%
!!! AAATGTAGTAATGGAAATTT+TGG + tig0001315:27954-27973 None:intergenic 20.0%
!! ATCAAACATATATTAAGGAA+TGG + tig0001315:29024-29043 None:intergenic 20.0%
!! AGGAATATAATATATCTTAG+AGG + tig0001315:29142-29161 None:intergenic 20.0%
!! ATGAAAAATTCCTATATTGT+AGG + tig0001315:29462-29481 None:intergenic 20.0%
!!! ACAATATAGGAATTTTTCAT+TGG - tig0001315:29462-29481 Msa1336750:intron 20.0%
!! ATTGTATAAGAGAAATCAAA+AGG + tig0001315:29763-29782 None:intergenic 20.0%
!!! TCCTTTCATATTATGATTTT+AGG - tig0001315:30473-30492 Msa1336750:intron 20.0%
!!! CCTTTCATATTATGATTTTA+GGG - tig0001315:30474-30493 Msa1336750:intron 20.0%
!! ATTATCCTTCAATTATTAAG+AGG - tig0001315:30839-30858 Msa1336750:intron 20.0%
!! TTATCCTTCAATTATTAAGA+GGG - tig0001315:30840-30859 Msa1336750:intron 20.0%
!! AATTCTCTTCATTTAATTAG+GGG - tig0001315:30881-30900 Msa1336750:intron 20.0%
!!! AATTTGATGAGTCTTATAAA+AGG - tig0001315:30937-30956 Msa1336750:CDS 20.0%
!!! ATTTGATGAGTCTTATAAAA+GGG - tig0001315:30938-30957 Msa1336750:CDS 20.0%
!!! ATTAAAACATTTAGTTCCAA+TGG + tig0001315:31195-31214 None:intergenic 20.0%
!!! ATGTTTTAATTTTTTTCCAG+GGG - tig0001315:31205-31224 Msa1336750:CDS 20.0%
!! AACATAAGTGAATAACAATA+AGG + tig0001315:31826-31845 None:intergenic 20.0%
!! TTAATAAAGGATTATTATGC+CGG - tig0001315:31861-31880 Msa1336750:CDS 20.0%
!! TTTCTCCATAAAAACATAAT+TGG + tig0001315:32036-32055 None:intergenic 20.0%
!! TTATTCAACTCCAAATATAA+GGG + tig0001315:32295-32314 None:intergenic 20.0%
!!! ATTTTTATCCATTTAACTGT+TGG - tig0001315:32769-32788 Msa1336750:intron 20.0%
!!! TTTTTATCCATTTAACTGTT+GGG - tig0001315:32770-32789 Msa1336750:intron 20.0%
!! ACATATATTACGATATATAC+TGG - tig0001315:33134-33153 Msa1336750:CDS 20.0%
!! CATATATTACGATATATACT+GGG - tig0001315:33135-33154 Msa1336750:CDS 20.0%
!!! ACTTTTTTTTCTTTTCAAAC+AGG - tig0001315:33670-33689 Msa1336750:intron 20.0%
!! GATGTTGAGACATAAATTTT+TGG + tig0001315:26746-26765 None:intergenic 25.0%
!!! AGAATCAGAAATTTTTCAGA+TGG - tig0001315:26916-26935 Msa1336750:three_prime_UTR 25.0%
! AAAAAGAGGTAGAGATAAAA+GGG + tig0001315:27099-27118 None:intergenic 25.0%
! TAAAAAGAGGTAGAGATAAA+AGG + tig0001315:27100-27119 None:intergenic 25.0%
!!! TTACATGCATTTTAATCAAG+TGG - tig0001315:27127-27146 Msa1336750:CDS 25.0%
!!! TACATGCATTTTAATCAAGT+GGG - tig0001315:27128-27147 Msa1336750:CDS 25.0%
! ATTTGATATGTATTGTTGTC+AGG - tig0001315:27220-27239 Msa1336750:intron 25.0%
! TCTAAATTACAGTTACAAAG+TGG + tig0001315:27711-27730 None:intergenic 25.0%
!!! TCAAAACTCTTTTGAGAAAA+GGG + tig0001315:27803-27822 None:intergenic 25.0%
!!! ATCAAAACTCTTTTGAGAAA+AGG + tig0001315:27804-27823 None:intergenic 25.0%
!! AAAATTACACTGATGGTTTT+TGG - tig0001315:27855-27874 Msa1336750:intron 25.0%
!! AAATTACACTGATGGTTTTT+GGG - tig0001315:27856-27875 Msa1336750:intron 25.0%
! CAAAAGAAATGAAGAAATAG+AGG + tig0001315:28095-28114 None:intergenic 25.0%
!!! CTATTTCTTCATTTCTTTTG+TGG - tig0001315:28095-28114 Msa1336750:intron 25.0%
! TTTGTATAGTTGATTAGACT+AGG - tig0001315:28528-28547 Msa1336750:intron 25.0%
! TTGTATAGTTGATTAGACTA+GGG - tig0001315:28529-28548 Msa1336750:intron 25.0%
! TTATTTCCTTAAAACTCTCT+AGG - tig0001315:28616-28635 Msa1336750:intron 25.0%
! ACTTATCATATAAGTGCTTA+CGG + tig0001315:28708-28727 None:intergenic 25.0%
! GATAAGTGTTTATGCTAAAA+CGG - tig0001315:28721-28740 Msa1336750:intron 25.0%
! AATTCAAATTCACTACTGTT+TGG + tig0001315:28774-28793 None:intergenic 25.0%
!! GAATTTGAATTCTACCTTTT+AGG - tig0001315:28783-28802 Msa1336750:intron 25.0%
!!! CACATTTTACGTTTTGAATT+TGG + tig0001315:29097-29116 None:intergenic 25.0%
! CAAATTCAAAACGTAAAATG+TGG - tig0001315:29095-29114 Msa1336750:intron 25.0%
! AGTATTCAAAACTGTTAACT+AGG + tig0001315:29716-29735 None:intergenic 25.0%
! ATACAATTAAGTATCTCTGA+AGG - tig0001315:29776-29795 Msa1336750:intron 25.0%
! TACGTCTAATTGAGTATTTA+AGG - tig0001315:29856-29875 Msa1336750:intron 25.0%
! ACGTCTAATTGAGTATTTAA+GGG - tig0001315:29857-29876 Msa1336750:intron 25.0%
! TCTTAAAAGCTAGTTATCAA+GGG + tig0001315:30339-30358 None:intergenic 25.0%
! ATCTTAAAAGCTAGTTATCA+AGG + tig0001315:30340-30359 None:intergenic 25.0%
! ATACTTATCAAAGTCTTGAT+TGG - tig0001315:30401-30420 Msa1336750:intron 25.0%
! TAATATGAAAGGACATTCTT+AGG + tig0001315:30466-30485 None:intergenic 25.0%
! CCCTAAAATCATAATATGAA+AGG + tig0001315:30477-30496 None:intergenic 25.0%
! AGAAAAATAATATTACCAGG+AGG + tig0001315:30627-30646 None:intergenic 25.0%
! GGAAGAAAAATAATATTACC+AGG + tig0001315:30630-30649 None:intergenic 25.0%
!! ATTCTTGTGCATTTTATCAA+GGG + tig0001315:30764-30783 None:intergenic 25.0%
!! AATTCTTGTGCATTTTATCA+AGG + tig0001315:30765-30784 None:intergenic 25.0%
! ATAAGACTCATCAAATTTCA+AGG + tig0001315:30934-30953 None:intergenic 25.0%
!! TTTGATGAGTCTTATAAAAG+GGG - tig0001315:30939-30958 Msa1336750:CDS 25.0%
!!! TGTTTTAATTTTTTTCCAGG+GGG - tig0001315:31206-31225 Msa1336750:CDS 25.0%
!! GCATACTTGGTAATTAATAA+GGG + tig0001315:31306-31325 None:intergenic 25.0%
!! TGCATACTTGGTAATTAATA+AGG + tig0001315:31307-31326 None:intergenic 25.0%
! TCAAAAATACAGAAGTGAAA+AGG + tig0001315:31344-31363 None:intergenic 25.0%
!!! TTCACTTCTGTATTTTTGAA+TGG - tig0001315:31345-31364 Msa1336750:CDS 25.0%
!! TTGTTATTCACTTATGTTTC+AGG - tig0001315:31828-31847 Msa1336750:CDS 25.0%
! TCCATAAAAACATAATTGGT+GGG + tig0001315:32032-32051 None:intergenic 25.0%
! TAATTTAGTGCTTACTCAAT+AGG + tig0001315:32149-32168 None:intergenic 25.0%
! TATTCAACTCCAAATATAAG+GGG + tig0001315:32294-32313 None:intergenic 25.0%
! CTTATTCAACTCCAAATATA+AGG + tig0001315:32296-32315 None:intergenic 25.0%
!! CATTTTATAGCAGCATAATA+AGG + tig0001315:32412-32431 None:intergenic 25.0%
! TATAAAATGTACTCTATTGC+AGG - tig0001315:32423-32442 Msa1336750:intron 25.0%
! ATTTGATGCATTACAATCTT+GGG + tig0001315:32686-32705 None:intergenic 25.0%
! TATTTGATGCATTACAATCT+TGG + tig0001315:32687-32706 None:intergenic 25.0%
! CATCAAATAATGTAACTGTT+GGG - tig0001315:32698-32717 Msa1336750:intron 25.0%
! ATCAAATAATGTAACTGTTG+GGG - tig0001315:32699-32718 Msa1336750:intron 25.0%
!! TTTTATCCATTTAACTGTTG+GGG - tig0001315:32771-32790 Msa1336750:intron 25.0%
! TATATCGTAATATATGTGAC+CGG + tig0001315:33131-33150 None:intergenic 25.0%
! CATAAACAGAAGATATTGAA+AGG - tig0001315:33272-33291 Msa1336750:exon 25.0%
! AACATTGCAAATTAGAGAAT+TGG - tig0001315:33505-33524 Msa1336750:intron 25.0%
!!! AGAAAAAAAAGTGCTACATT+CGG + tig0001315:33662-33681 None:intergenic 25.0%
! TATAGCGGAAAAAACGTATA+AGG + tig0001315:27020-27039 None:intergenic 30.0%
TGTAGAAGAATAGTGTATAG+CGG + tig0001315:27035-27054 None:intergenic 30.0%
ATAAAAGGGTTACTTGAAAG+AGG + tig0001315:27085-27104 None:intergenic 30.0%
!!! GTTGTTGGTTTTGTCATAAA+TGG - tig0001315:27180-27199 Msa1336750:intron 30.0%
!! TTAGGATAGGATTAGTTAGT+TGG - tig0001315:27245-27264 Msa1336750:intron 30.0%
!!! CTTGAAAATTGTTTTGGCAT+TGG - tig0001315:27282-27301 Msa1336750:CDS 30.0%
!!! TGGCATTGGTTTTTAATGTA+TGG - tig0001315:27296-27315 Msa1336750:CDS 30.0%
GAAATGTCGTAAATTCTCAT+TGG + tig0001315:27679-27698 None:intergenic 30.0%
! AGTTACAAAGTGGACTTATA+TGG + tig0001315:27701-27720 None:intergenic 30.0%
TAGAAATAACTGCAAATTGG+TGG - tig0001315:27727-27746 Msa1336750:CDS 30.0%
!! CAAAACTCTTTTGAGAAAAG+GGG + tig0001315:27802-27821 None:intergenic 30.0%
TGATGAAATATGATTGCATG+CGG - tig0001315:27827-27846 Msa1336750:intron 30.0%
GGCTAAAAAAATTACACTGA+TGG - tig0001315:27848-27867 Msa1336750:intron 30.0%
ATCAACTACACTAATAAAGC+AGG + tig0001315:27993-28012 None:intergenic 30.0%
! CTTTTCAATTCATCAAGCAT+TGG - tig0001315:28060-28079 Msa1336750:intron 30.0%
AGAAATGAAGAAATAGAGGA+AGG + tig0001315:28091-28110 None:intergenic 30.0%
! CAAAGAATTGGTTCAACAAA+GGG - tig0001315:28320-28339 Msa1336750:intron 30.0%
! ATTTGGTAACTATGCATTCA+TGG - tig0001315:28368-28387 Msa1336750:intron 30.0%
GTTAAGCAATTGAATGATCT+CGG - tig0001315:28408-28427 Msa1336750:intron 30.0%
TCAAATAAGCCAATTGAAAC+AGG + tig0001315:28555-28574 None:intergenic 30.0%
TGCAATGGACACAAAATTAT+TGG - tig0001315:28806-28825 Msa1336750:intron 30.0%
AATGGACACAAAATTATTGG+AGG - tig0001315:28809-28828 Msa1336750:intron 30.0%
!! AATTATTGGAGGCACTTTAT+TGG - tig0001315:28820-28839 Msa1336750:intron 30.0%
TTCTCCAACATTTCATAAGA+TGG - tig0001315:28902-28921 Msa1336750:CDS 30.0%
TCTCCAACATTTCATAAGAT+GGG - tig0001315:28903-28922 Msa1336750:CDS 30.0%
TCTGCTCCATAATCAAATAA+TGG + tig0001315:29172-29191 None:intergenic 30.0%
TTACTGTCTCATTGAATAGT+TGG - tig0001315:29431-29450 Msa1336750:intron 30.0%
ATAAGATATGGGATCAGAAT+GGG - tig0001315:29546-29565 Msa1336750:intron 30.0%
!!! GGACTTTTTTATGCTTATGA+TGG - tig0001315:29620-29639 Msa1336750:CDS 30.0%
! TTATGATGGAAATCTAAAGC+TGG - tig0001315:29634-29653 Msa1336750:CDS 30.0%
! TATGATGGAAATCTAAAGCT+GGG - tig0001315:29635-29654 Msa1336750:CDS 30.0%
CGTCTAATTGAGTATTTAAG+GGG - tig0001315:29858-29877 Msa1336750:intron 30.0%
AATTGAGTATTTAAGGGGTT+TGG - tig0001315:29863-29882 Msa1336750:intron 30.0%
TACAAAATGTTGTCAAGTAG+CGG - tig0001315:30009-30028 Msa1336750:intron 30.0%
! CAGTAGAGTATTTAGTAGTT+TGG - tig0001315:30306-30325 Msa1336750:intron 30.0%
TTAAAAGCTAGTTATCAAGG+GGG + tig0001315:30337-30356 None:intergenic 30.0%
CTTAAAAGCTAGTTATCAAG+GGG + tig0001315:30338-30357 None:intergenic 30.0%
TTGATAAGTATTCAAGCACT+TGG + tig0001315:30392-30411 None:intergenic 30.0%
CATCAAAAAGTAAAACGAAG+TGG + tig0001315:30670-30689 None:intergenic 30.0%
! TTCTTGTGCATTTTATCAAG+GGG + tig0001315:30763-30782 None:intergenic 30.0%
ATCTCCCTCTTAATAATTGA+AGG + tig0001315:30847-30866 None:intergenic 30.0%
CAATTATTAAGAGGGAGATA+TGG - tig0001315:30848-30867 Msa1336750:intron 30.0%
GGGACAATAAAATTTGCAAA+AGG - tig0001315:30959-30978 Msa1336750:CDS 30.0%
TTGCAAAAGGTCTTACATAT+AGG - tig0001315:30972-30991 Msa1336750:CDS 30.0%
TGCAAAAGGTCTTACATATA+GGG - tig0001315:30973-30992 Msa1336750:CDS 30.0%
AGATACTGCAAGTAATGTAT+AGG + tig0001315:31116-31135 None:intergenic 30.0%
TGTTTGAATTCTGATACCAT+TGG - tig0001315:31176-31195 Msa1336750:intron 30.0%
TTGTCCAGATGAAACAAATT+AGG - tig0001315:31419-31438 Msa1336750:intron 30.0%
!! ATTCACTTATGTTTCAGGTT+TGG - tig0001315:31833-31852 Msa1336750:CDS 30.0%
AGGTTTGGATTGCTTAATAA+AGG - tig0001315:31848-31867 Msa1336750:CDS 30.0%
GTTTATTTGAATAAGCTCTC+AGG - tig0001315:31970-31989 Msa1336750:CDS 30.0%
ATAAAAACATAATTGGTGGG+TGG + tig0001315:32029-32048 None:intergenic 30.0%
!! ACCCACCAATTATGTTTTTA+TGG - tig0001315:32028-32047 Msa1336750:CDS 30.0%
CTCCATAAAAACATAATTGG+TGG + tig0001315:32033-32052 None:intergenic 30.0%
TTGAATAAGAAATATGAGCC+TGG - tig0001315:32307-32326 Msa1336750:intron 30.0%
TGAATAAGAAATATGAGCCT+GGG - tig0001315:32308-32327 Msa1336750:intron 30.0%
!! ACTCTCTAAAATCGATATCA+GGG + tig0001315:32489-32508 None:intergenic 30.0%
!! TACTCTCTAAAATCGATATC+AGG + tig0001315:32490-32509 None:intergenic 30.0%
TGACATTTATTAACCTCTGA+GGG + tig0001315:32538-32557 None:intergenic 30.0%
TTGACATTTATTAACCTCTG+AGG + tig0001315:32539-32558 None:intergenic 30.0%
GCATCAAATAATGTAACTGT+TGG - tig0001315:32697-32716 Msa1336750:intron 30.0%
TCAAATAATGTAACTGTTGG+GGG - tig0001315:32700-32719 Msa1336750:intron 30.0%
TTTATCCATTTAACTGTTGG+GGG - tig0001315:32772-32791 Msa1336750:intron 30.0%
ATTTACAGGTTTCAAAGACA+AGG - tig0001315:32918-32937 Msa1336750:intron 30.0%
CTTAAACAGAACGCTAAAAT+TGG + tig0001315:32949-32968 None:intergenic 30.0%
ATAAATAAATGCATGGCATC+AGG + tig0001315:33026-33045 None:intergenic 30.0%
ATATCGTAATATATGTGACC+GGG + tig0001315:33130-33149 None:intergenic 30.0%
TATGTTCATCGAAACACTAT+AGG - tig0001315:33240-33259 Msa1336750:CDS 30.0%
ATGTTCATCGAAACACTATA+GGG - tig0001315:33241-33260 Msa1336750:CDS 30.0%
AAACAGAAGATATTGAAAGG+CGG - tig0001315:33275-33294 Msa1336750:five_prime_UTR 30.0%
ATGAATCACTGACACATTTA+TGG + tig0001315:33394-33413 None:intergenic 30.0%
!! TGTGCTTGTGCTTGTTATTA+TGG + tig0001315:26847-26866 None:intergenic 35.0%
TCATTGTGCAGTGAAAATCA+TGG - tig0001315:26879-26898 Msa1336750:three_prime_UTR 35.0%
ATGTATTGTTGTCAGGACTT+AGG - tig0001315:27227-27246 Msa1336750:intron 35.0%
AATGTATGGTCTATGAAGCA+CGG - tig0001315:27310-27329 Msa1336750:CDS 35.0%
TGATGAATGTGTGACAATGT+CGG + tig0001315:27344-27363 None:intergenic 35.0%
CGTAAATTCTCATTGGATGT+CGG + tig0001315:27672-27691 None:intergenic 35.0%
! AAAGTGTCATACACATGAAG+TGG + tig0001315:28044-28063 None:intergenic 35.0%
GTCAGTCTAAACTCTTTCAA+GGG + tig0001315:28300-28319 None:intergenic 35.0%
GTTTAGACTGACCAAAGAAT+TGG - tig0001315:28308-28327 Msa1336750:intron 35.0%
CCTTTGTTGAACCAATTCTT+TGG + tig0001315:28322-28341 None:intergenic 35.0%
! CCAAAGAATTGGTTCAACAA+AGG - tig0001315:28319-28338 Msa1336750:intron 35.0%
TCATGGACTTTATTCTGACT+TGG - tig0001315:28385-28404 Msa1336750:intron 35.0%
CATGGACTTTATTCTGACTT+GGG - tig0001315:28386-28405 Msa1336750:intron 35.0%
GGAGTTTCCAATTATCTTGT+TGG - tig0001315:28429-28448 Msa1336750:CDS 35.0%
ATGCTCACCAACAAGATAAT+TGG + tig0001315:28439-28458 None:intergenic 35.0%
!! CATGTATGCATTTCTAGCAA+GGG + tig0001315:28504-28523 None:intergenic 35.0%
! AGCTATCCTAGAGAGTTTTA+AGG + tig0001315:28625-28644 None:intergenic 35.0%
!! ATTCTACCTTTTAGGTGCAA+TGG - tig0001315:28791-28810 Msa1336750:intron 35.0%
CTCCAACATTTCATAAGATG+GGG - tig0001315:28904-28923 Msa1336750:CDS 35.0%
AACATTTCATAAGATGGGGA+GGG - tig0001315:28908-28927 Msa1336750:CDS 35.0%
! ATAAACTCCATACTGCCTTT+TGG - tig0001315:28945-28964 Msa1336750:CDS 35.0%
TGTTGGTATAACTTGATCAC+TGG + tig0001315:29243-29262 None:intergenic 35.0%
AGACTATCATCAACAACTGT+TGG + tig0001315:29260-29279 None:intergenic 35.0%
!! AACAGTTGTTGATGATAGTC+TGG - tig0001315:29259-29278 Msa1336750:intron 35.0%
! TTGATGATAGTCTGGAAGTT+TGG - tig0001315:29267-29286 Msa1336750:intron 35.0%
ATAAGCAGATTTAACATCCG+TGG - tig0001315:29310-29329 Msa1336750:intron 35.0%
!! AAGAGCATTGATTTGATCCA+CGG + tig0001315:29330-29349 None:intergenic 35.0%
AAACAAGTGCGTTAAAACGA+GGG + tig0001315:29376-29395 None:intergenic 35.0%
AATTTAATCGCAGACTCTGT+AGG + tig0001315:29491-29510 None:intergenic 35.0%
TACAGAGTCTGCGATTAAAT+TGG - tig0001315:29490-29509 Msa1336750:intron 35.0%
CGATTAAATTGGCAAAGGAA+TGG - tig0001315:29501-29520 Msa1336750:intron 35.0%
TAAATTGGCAAAGGAATGGA+TGG - tig0001315:29505-29524 Msa1336750:intron 35.0%
TTGTGGCAGATGATAAGATA+TGG - tig0001315:29534-29553 Msa1336750:intron 35.0%
TGTGGCAGATGATAAGATAT+GGG - tig0001315:29535-29554 Msa1336750:intron 35.0%
GATAAGATATGGGATCAGAA+TGG - tig0001315:29545-29564 Msa1336750:intron 35.0%
! TGGTCATACATATTTTGTCC+AGG - tig0001315:29685-29704 Msa1336750:CDS 35.0%
! CATACATATTTTGTCCAGGT+AGG - tig0001315:29689-29708 Msa1336750:CDS 35.0%
! TATCTCTGAAGGAATCTGAT+GGG - tig0001315:29787-29806 Msa1336750:intron 35.0%
! TTCCCTCTTGATAGCTATAA+AGG - tig0001315:29889-29908 Msa1336750:intron 35.0%
! TCCCTCTTGATAGCTATAAA+GGG - tig0001315:29890-29909 Msa1336750:intron 35.0%
TCCCTTTATAGCTATCAAGA+GGG + tig0001315:29894-29913 None:intergenic 35.0%
GCTATTTAACAACACTGCTT+GGG + tig0001315:29923-29942 None:intergenic 35.0%
AGCTATTTAACAACACTGCT+TGG + tig0001315:29924-29943 None:intergenic 35.0%
!! TAAAGAGAGGTGTTGTGATA+GGG - tig0001315:30232-30251 Msa1336750:intron 35.0%
ATACTACTCAATGTGAGACT+TGG + tig0001315:30278-30297 None:intergenic 35.0%
CACACAACATTTCAATATGC+AGG - tig0001315:30534-30553 Msa1336750:CDS 35.0%
GAGGATTATAGTATTCAGGT+GGG + tig0001315:30608-30627 None:intergenic 35.0%
ATGCATATGTGTGAATACAC+TGG - tig0001315:30687-30706 Msa1336750:CDS 35.0%
! TCTTGTGCATTTTATCAAGG+GGG + tig0001315:30762-30781 None:intergenic 35.0%
AAAGGTCTTACATATAGGGA+CGG - tig0001315:30977-30996 Msa1336750:CDS 35.0%
TTACTTGCAGTATCTGCTTA+TGG - tig0001315:31121-31140 Msa1336750:intron 35.0%
TACTTGCAGTATCTGCTTAT+GGG - tig0001315:31122-31141 Msa1336750:intron 35.0%
!!! AACAAGCGTTTTGGAATAGA+TGG + tig0001315:31248-31267 None:intergenic 35.0%
AAGGGTAAAATGTGATCCAA+TGG + tig0001315:31288-31307 None:intergenic 35.0%
!! CAGTCCTAATTTGTTTCATC+TGG + tig0001315:31426-31445 None:intergenic 35.0%
! ACTGGTGAGGATTATTTTCT+AGG - tig0001315:31477-31496 Msa1336750:intron 35.0%
!! TCTCTTCTAGTTTGATTACG+TGG - tig0001315:31798-31817 Msa1336750:CDS 35.0%
! CTCTGGAAGTTCATTTAACA+TGG + tig0001315:32455-32474 None:intergenic 35.0%
CATGTTAAATGAACTTCCAG+AGG - tig0001315:32453-32472 Msa1336750:intron 35.0%
!! CAGTGATGGATTATCAAGTA+TGG + tig0001315:32515-32534 None:intergenic 35.0%
ATTTCCAAAGCATAGCAATG+AGG - tig0001315:32732-32751 Msa1336750:intron 35.0%
AAAGCATAGCAATGAGGAAA+CGG - tig0001315:32738-32757 Msa1336750:intron 35.0%
CCACATGTTAGAATATGCTT+TGG + tig0001315:32811-32830 None:intergenic 35.0%
CCAAAGCATATTCTAACATG+TGG - tig0001315:32808-32827 Msa1336750:intron 35.0%
CTTCTTGCATTGAAGAAAAC+TGG + tig0001315:32897-32916 None:intergenic 35.0%
!! TCAATGCAAGAAGCATTTAC+AGG - tig0001315:32904-32923 Msa1336750:intron 35.0%
AAACGACTTAAACACTACAC+CGG - tig0001315:33076-33095 Msa1336750:intron 35.0%
TTAAACACTACACCGGTATA+TGG - tig0001315:33083-33102 Msa1336750:intron 35.0%
TGATCATCTTCAGAAGTTTG+AGG + tig0001315:33190-33209 None:intergenic 35.0%
TGTTCATCGAAACACTATAG+GGG - tig0001315:33242-33261 Msa1336750:CDS 35.0%
ACATCCTCAACATGGATAAA+GGG + tig0001315:33422-33441 None:intergenic 35.0%
AACCAACAACATATGAGATG+AGG - tig0001315:33529-33548 Msa1336750:intron 35.0%
GCTAGAAGTTTCTATTCAAG+AGG - tig0001315:33596-33615 Msa1336750:intron 35.0%
ACTGCACAATGAAGAGAAGA+AGG + tig0001315:26871-26890 None:intergenic 40.0%
!! AATTTTTCAGATGGCGTGTG+AGG - tig0001315:26925-26944 Msa1336750:three_prime_UTR 40.0%
ATCTACACTGTTGTCATCGT+TGG - tig0001315:26980-26999 Msa1336750:exon 40.0%
ACTTGAAAGAGGAGGAAAAG+AGG + tig0001315:27074-27093 None:intergenic 40.0%
AAAGGGTTACTTGAAAGAGG+AGG + tig0001315:27082-27101 None:intergenic 40.0%
TTGTTGTCAGGACTTAGGAT+AGG - tig0001315:27232-27251 Msa1336750:intron 40.0%
TTGAACGTACACACATGTGT+CGG - tig0001315:27365-27384 Msa1336750:intron 40.0%
TCTGTAGCACATCTGATTGA+AGG + tig0001315:27425-27444 None:intergenic 40.0%
! GCTCAACTAGTTTGAGCTAA+GGG + tig0001315:27461-27480 None:intergenic 40.0%
! AGCTCAACTAGTTTGAGCTA+AGG + tig0001315:27462-27481 None:intergenic 40.0%
AATTCTCATTGGATGTCGGT+TGG + tig0001315:27668-27687 None:intergenic 40.0%
!! GCAAATTGGTGGATTCTCAT+TGG - tig0001315:27738-27757 Msa1336750:CDS 40.0%
ATTGGATGTCAGTGTGACAT+TGG - tig0001315:27756-27775 Msa1336750:intron 40.0%
TGATCCTTTCAACTACTCTC+TGG - tig0001315:28009-28028 Msa1336750:intron 40.0%
ACAACCAGAGAGTAGTTGAA+AGG + tig0001315:28016-28035 None:intergenic 40.0%
! CTGAAAAGCATGCTAAGTCA+AGG + tig0001315:28134-28153 None:intergenic 40.0%
! CTTAGCATGCTTTTCAGATG+AGG - tig0001315:28137-28156 Msa1336750:intron 40.0%
! GCTTTTCAGATGAGGATTCT+CGG - tig0001315:28145-28164 Msa1336750:intron 40.0%
AGTCTAAACTCTTTCAAGGG+TGG + tig0001315:28297-28316 None:intergenic 40.0%
GGTCAGTCTAAACTCTTTCA+AGG + tig0001315:28301-28320 None:intergenic 40.0%
!! CCATGTATGCATTTCTAGCA+AGG + tig0001315:28505-28524 None:intergenic 40.0%
CCTTGCTAGAAATGCATACA+TGG - tig0001315:28502-28521 Msa1336750:CDS 40.0%
GCTTATTTGAGCTTATCTGC+TGG - tig0001315:28565-28584 Msa1336750:intron 40.0%
TTGTGTCCATTGCACCTAAA+AGG + tig0001315:28800-28819 None:intergenic 40.0%
!! TTGGAGGCACTTTATTGGAA+AGG - tig0001315:28825-28844 Msa1336750:intron 40.0%
!! TGGAGGCACTTTATTGGAAA+GGG - tig0001315:28826-28845 Msa1336750:intron 40.0%
! ACTTTATTGGAAAGGGGTAC+CGG - tig0001315:28833-28852 Msa1336750:intron 40.0%
TGGCTGTTCATGTCAAAAAC+CGG + tig0001315:28855-28874 None:intergenic 40.0%
CTCCCCATCTTATGAAATGT+TGG + tig0001315:28909-28928 None:intergenic 40.0%
CAACATTTCATAAGATGGGG+AGG - tig0001315:28907-28926 Msa1336750:CDS 40.0%
ATCAACAGTTCGACACCAAA+AGG + tig0001315:28963-28982 None:intergenic 40.0%
GTTGATGTGTGATACTGACA+TGG - tig0001315:28977-28996 Msa1336750:intron 40.0%
TGTGTGATACTGACATGGTT+TGG - tig0001315:28982-29001 Msa1336750:intron 40.0%
!! TACTGACATGGTTTGGTTGA+AGG - tig0001315:28989-29008 Msa1336750:intron 40.0%
AACGAGCAAGATATGGAAGT+GGG + tig0001315:29196-29215 None:intergenic 40.0%
TAACGAGCAAGATATGGAAG+TGG + tig0001315:29197-29216 None:intergenic 40.0%
GATGTTAAAACATCTGCTCC+GGG + tig0001315:29221-29240 None:intergenic 40.0%
GGATGTTAAAACATCTGCTC+CGG + tig0001315:29222-29241 None:intergenic 40.0%
AGTCTGGAAGTTTGGAAAGA+AGG - tig0001315:29275-29294 Msa1336750:intron 40.0%
CAAACAAGTGCGTTAAAACG+AGG + tig0001315:29377-29396 None:intergenic 40.0%
! GTCTCATTGAATAGTTGGTG+CGG - tig0001315:29436-29455 Msa1336750:intron 40.0%
GTCTGCGATTAAATTGGCAA+AGG - tig0001315:29496-29515 Msa1336750:intron 40.0%
TGATATTGTCCACAGAGAGT+TGG - tig0001315:29574-29593 Msa1336750:intron 40.0%
GATATTGTCCACAGAGAGTT+GGG - tig0001315:29575-29594 Msa1336750:intron 40.0%
CCACTGCAAAAGATACTTGA+AGG + tig0001315:29668-29687 None:intergenic 40.0%
! CCTTCAAGTATCTTTTGCAG+TGG - tig0001315:29665-29684 Msa1336750:CDS 40.0%
! GTATCTCTGAAGGAATCTGA+TGG - tig0001315:29786-29805 Msa1336750:intron 40.0%
! ATCTCTGAAGGAATCTGATG+GGG - tig0001315:29788-29807 Msa1336750:intron 40.0%
TACCACTCGATGTAGGAATT+AGG + tig0001315:29833-29852 None:intergenic 40.0%
CTCCCTTTATAGCTATCAAG+AGG + tig0001315:29895-29914 None:intergenic 40.0%
ACTTGAGAACAATGTTGTCG+CGG + tig0001315:30096-30115 None:intergenic 40.0%
CTTGAATACGTATCAAAGCC+CGG - tig0001315:30117-30136 Msa1336750:intron 40.0%
! GAGGCTTTACTCAGTCTTTT+CGG + tig0001315:30183-30202 None:intergenic 40.0%
!! CTAAAGAGAGGTGTTGTGAT+AGG - tig0001315:30231-30250 Msa1336750:intron 40.0%
TATGTATCAGCAACTCAGGT+TGG - tig0001315:30497-30516 Msa1336750:intron 40.0%
AATGTTGTGTGCACTGCATA+TGG + tig0001315:30525-30544 None:intergenic 40.0%
TTTCAATATGCAGGCACAGA+AGG - tig0001315:30543-30562 Msa1336750:CDS 40.0%
TATAGTATTCAGGTGGGTCA+TGG + tig0001315:30602-30621 None:intergenic 40.0%
GGAGGATTATAGTATTCAGG+TGG + tig0001315:30609-30628 None:intergenic 40.0%
CCAGGAGGATTATAGTATTC+AGG + tig0001315:30612-30631 None:intergenic 40.0%
CCTGAATACTATAATCCTCC+TGG - tig0001315:30609-30628 Msa1336750:CDS 40.0%
GTGGTGTTTCACTGAAATTG+AGG + tig0001315:30651-30670 None:intergenic 40.0%
ATCGCAGTATAGATGAATGG+CGG + tig0001315:31069-31088 None:intergenic 40.0%
AGCATCGCAGTATAGATGAA+TGG + tig0001315:31072-31091 None:intergenic 40.0%
CAAGTCAATACGTGCATACT+TGG + tig0001315:31319-31338 None:intergenic 40.0%
TGATCCAAAGGACAGAGAAA+AGG + tig0001315:31763-31782 None:intergenic 40.0%
TCCTTTGGATCATGTGTTTG+AGG - tig0001315:31771-31790 Msa1336750:CDS 40.0%
ACCTCAAACACATGATCCAA+AGG + tig0001315:31775-31794 None:intergenic 40.0%
AAGGATTATTATGCCGGTGA+TGG - tig0001315:31867-31886 Msa1336750:CDS 40.0%
AACACAAGTACTACCATCAC+CGG + tig0001315:31883-31902 None:intergenic 40.0%
GGTGGATAGAAATTGAAGAG+CGG + tig0001315:32011-32030 None:intergenic 40.0%
TTGATCCGTCCCCTTATATT+TGG - tig0001315:32282-32301 Msa1336750:intron 40.0%
CAACTCCAAATATAAGGGGA+CGG + tig0001315:32290-32309 None:intergenic 40.0%
GAATTCAGGTGAAAAAGTCG+TGG - tig0001315:32632-32651 Msa1336750:intron 40.0%
GATGTTCACCTCTGTAAAGA+AGG - tig0001315:32658-32677 Msa1336750:intron 40.0%
GTTTCCTCATTGCTATGCTT+TGG + tig0001315:32739-32758 None:intergenic 40.0%
ATATACTGGGATGAGAAACC+TGG - tig0001315:33148-33167 Msa1336750:CDS 40.0%
CATCTTCAGAAGTTTGAGGA+GGG + tig0001315:33186-33205 None:intergenic 40.0%
TCATCTTCAGAAGTTTGAGG+AGG + tig0001315:33187-33206 None:intergenic 40.0%
!! TTCTGAAATTGACCTCACCA+AGG + tig0001315:33217-33236 None:intergenic 40.0%
! TCTTAGTCTTCACAACGAGT+TGG + tig0001315:33309-33328 None:intergenic 40.0%
ACACTTATTGAAGTCATGCC+CGG - tig0001315:33365-33384 Msa1336750:intron 40.0%
ACTGACACATTTATGGACAC+CGG + tig0001315:33387-33406 None:intergenic 40.0%
GACATCCTCAACATGGATAA+AGG + tig0001315:33423-33442 None:intergenic 40.0%
!! AAGTACTGACATCCTCAACA+TGG + tig0001315:33430-33449 None:intergenic 40.0%
AGGATGTCAGTACTTAGTTG+AGG - tig0001315:33435-33454 Msa1336750:intron 40.0%
GGATGTCAGTACTTAGTTGA+GGG - tig0001315:33436-33455 Msa1336750:intron 40.0%
AGCCTCATCTCATATGTTGT+TGG + tig0001315:33534-33553 None:intergenic 40.0%
TGACAACAGTGTAGATCGTG+AGG + tig0001315:26976-26995 None:intergenic 45.0%
CTTCTACAACCTCTTCAGCT+TGG - tig0001315:27047-27066 Msa1336750:CDS 45.0%
AAAAGAGGACCAAGCTGAAG+AGG + tig0001315:27059-27078 None:intergenic 45.0%
CAGATGTGCTACAGAGTGTA+TGG - tig0001315:27430-27449 Msa1336750:intron 45.0%
!!! TCGACACATTTTGGAGCTCA+GGG + tig0001315:28233-28252 None:intergenic 45.0%
! CAGGCTTTCTCGACACATTT+TGG + tig0001315:28242-28261 None:intergenic 45.0%
CGAGGAGGAACATTCAAAAC+AGG + tig0001315:28261-28280 None:intergenic 45.0%
! GGCATCTTTTTATTGCGAGG+AGG + tig0001315:28276-28295 None:intergenic 45.0%
! GGTGGCATCTTTTTATTGCG+AGG + tig0001315:28279-28298 None:intergenic 45.0%
AGACTAGGGCCTGTTTCAAT+TGG - tig0001315:28543-28562 Msa1336750:intron 45.0%
!! GGAGGCACTTTATTGGAAAG+GGG - tig0001315:28827-28846 Msa1336750:intron 45.0%
CAACATCCATGGTGCTCATA+TGG + tig0001315:28875-28894 None:intergenic 45.0%
CATATGAGCACCATGGATGT+TGG - tig0001315:28873-28892 Msa1336750:intron 45.0%
TTCGACACCAAAAGGCAGTA+TGG + tig0001315:28955-28974 None:intergenic 45.0%
CCATATCTTGCTCGTTATCC+CGG - tig0001315:29200-29219 Msa1336750:intron 45.0%
ACTGTTAACTAGGTCCTACC+TGG + tig0001315:29706-29725 None:intergenic 45.0%
AAGGAATCTGATGGGGACTT+GGG - tig0001315:29795-29814 Msa1336750:intron 45.0%
TGATGGGGACTTGGGTATTA+TGG - tig0001315:29803-29822 Msa1336750:intron 45.0%
TGCCTAATTCCTACATCGAG+TGG - tig0001315:29828-29847 Msa1336750:intron 45.0%
CGTAACATACCACTCGATGT+AGG + tig0001315:29840-29859 None:intergenic 45.0%
AACAATGTTGTCGCGGATAG+CGG + tig0001315:30089-30108 None:intergenic 45.0%
TTAGAAAGGGCTACCTATGG+AGG - tig0001315:30151-30170 Msa1336750:intron 45.0%
!! TTTTCGGTTAGCTCCTCCAT+AGG + tig0001315:30167-30186 None:intergenic 45.0%
!! GAGACTTCAGCTCTAAAGAG+AGG - tig0001315:30219-30238 Msa1336750:intron 45.0%
! AGGTGTTGTGATAGGGACTT+GGG - tig0001315:30239-30258 Msa1336750:intron 45.0%
AGGGTATGTATCAGCAACTC+AGG - tig0001315:30493-30512 Msa1336750:intron 45.0%
AAAGCATGGCTTCTCGTAGT+CGG + tig0001315:30578-30597 None:intergenic 45.0%
GGTCTTACATAGAGGAACAG+AGG + tig0001315:30741-30760 None:intergenic 45.0%
ATCAAGGGGGTCTTACATAG+AGG + tig0001315:30749-30768 None:intergenic 45.0%
! ATGAATGGCGGGAAACTGAA+TGG + tig0001315:31057-31076 None:intergenic 45.0%
TCGCAGTATAGATGAATGGC+GGG + tig0001315:31068-31087 None:intergenic 45.0%
CTAAATGACAAGAAACCCCC+TGG + tig0001315:31224-31243 None:intergenic 45.0%
! CAGGGGGTTTCTTGTCATTT+AGG - tig0001315:31222-31241 Msa1336750:CDS 45.0%
! CCAAAACGCTTGTTGCTAAG+CGG - tig0001315:31254-31273 Msa1336750:CDS 45.0%
! CTAAGCGGAAAGCATACCAT+TGG - tig0001315:31269-31288 Msa1336750:CDS 45.0%
TTCCCTTCTGAACAGAACAC+TGG - tig0001315:31459-31478 Msa1336750:intron 45.0%
CACCAGTGTTCTGTTCAGAA+GGG + tig0001315:31464-31483 None:intergenic 45.0%
TCACCAGTGTTCTGTTCAGA+AGG + tig0001315:31465-31484 None:intergenic 45.0%
TTCTGAACAGAACACTGGTG+AGG - tig0001315:31464-31483 Msa1336750:intron 45.0%
TTTAGGTCATGCCTCCACTA+TGG - tig0001315:31674-31693 Msa1336750:intron 45.0%
CTATCAATCCTGCACCATAG+TGG + tig0001315:31691-31710 None:intergenic 45.0%
CACTATGGTGCAGGATTGAT+AGG - tig0001315:31689-31708 Msa1336750:intron 45.0%
ATAGACCCCTTCAAAACACC+TGG + tig0001315:31730-31749 None:intergenic 45.0%
! ACAGCCTTTTCTCTGTCCTT+TGG - tig0001315:31756-31775 Msa1336750:intron 45.0%
ACAGTAACTGACTGACCAAG+GGG + tig0001315:32190-32209 None:intergenic 45.0%
GACAGTAACTGACTGACCAA+GGG + tig0001315:32191-32210 None:intergenic 45.0%
TGACAGTAACTGACTGACCA+AGG + tig0001315:32192-32211 None:intergenic 45.0%
ACCTTAGATGAGAGTAGTCG+TGG - tig0001315:32236-32255 Msa1336750:intron 45.0%
ACCACGACTACTCTCATCTA+AGG + tig0001315:32240-32259 None:intergenic 45.0%
GACGGATCAAGTCTATAGAG+TGG + tig0001315:32272-32291 None:intergenic 45.0%
AATATGAGCCTGGGTCAACT+TGG - tig0001315:32317-32336 Msa1336750:intron 45.0%
! AATCTCTTCCAAGTTGACCC+AGG + tig0001315:32328-32347 None:intergenic 45.0%
GAACTTCCAGAGGAAGAGTT+TGG - tig0001315:32463-32482 Msa1336750:intron 45.0%
ATCTCTGCTGAAGTTATGCC+TGG - tig0001315:32603-32622 Msa1336750:intron 45.0%
TCTCTGCTGAAGTTATGCCT+GGG - tig0001315:32604-32623 Msa1336750:intron 45.0%
ATGCCTGGGTTCTTGAATTC+AGG - tig0001315:32618-32637 Msa1336750:intron 45.0%
TCACCTGAATTCAAGAACCC+AGG + tig0001315:32624-32643 None:intergenic 45.0%
CTTGGGTTCCTTCTTTACAG+AGG + tig0001315:32669-32688 None:intergenic 45.0%
GTACTCCCCCAACAGTTAAA+TGG + tig0001315:32780-32799 None:intergenic 45.0%
CAGGTTTCAAAGACAAGGCA+AGG - tig0001315:32923-32942 Msa1336750:intron 45.0%
AAATGCATGGCATCAGGACA+TGG + tig0001315:33020-33039 None:intergenic 45.0%
GGTCACACAACACCATATAC+CGG + tig0001315:33098-33117 None:intergenic 45.0%
TCAGAAGTTTGAGGAGGGAT+TGG + tig0001315:33181-33200 None:intergenic 45.0%
GAAATTGACCTCACCAAGGT+GGG + tig0001315:33213-33232 None:intergenic 45.0%
TGAAATTGACCTCACCAAGG+TGG + tig0001315:33214-33233 None:intergenic 45.0%
CTGACACATTTATGGACACC+GGG + tig0001315:33386-33405 None:intergenic 45.0%
TACGCCCTTTATCCATGTTG+AGG - tig0001315:33415-33434 Msa1336750:intron 45.0%
! TGAGATGAGGCTGCAGTTTT+TGG - tig0001315:33542-33561 Msa1336750:intron 45.0%
GTGTAGATCGTGAGGAAGAG+AGG + tig0001315:26968-26987 None:intergenic 50.0%
ACATGACACATGTCCGACAC+AGG - tig0001315:27394-27413 Msa1336750:intron 50.0%
! ATTGAAGGCGTGTCCTGTGT+CGG + tig0001315:27410-27429 None:intergenic 50.0%
! GGATGTCGGTTGGACTTACA+TGG + tig0001315:27658-27677 None:intergenic 50.0%
!!! CTCGACACATTTTGGAGCTC+AGG + tig0001315:28234-28253 None:intergenic 50.0%
GAACAGCCATATGAGCACCA+TGG - tig0001315:28866-28885 Msa1336750:intron 50.0%
CCGGGATAACGAGCAAGATA+TGG + tig0001315:29203-29222 None:intergenic 50.0%
GTTGGTGCGGCCTACAATAT+AGG - tig0001315:29449-29468 Msa1336750:intron 50.0%
GGAATGGATGGAACTGCTTG+TGG - tig0001315:29517-29536 Msa1336750:intron 50.0%
GAAGGAATCTGATGGGGACT+TGG - tig0001315:29794-29813 Msa1336750:intron 50.0%
TTTCTAAGCCACCAACGACC+GGG + tig0001315:30138-30157 None:intergenic 50.0%
CTTTCTAAGCCACCAACGAC+CGG + tig0001315:30139-30158 None:intergenic 50.0%
!! GGTCGTTGGTGGCTTAGAAA+GGG - tig0001315:30138-30157 Msa1336750:intron 50.0%
GGCTTAGAAAGGGCTACCTA+TGG - tig0001315:30148-30167 Msa1336750:intron 50.0%
TAGAGCTGAAGTCTCAGCAG+CGG + tig0001315:30214-30233 None:intergenic 50.0%
!! GAGGTGTTGTGATAGGGACT+TGG - tig0001315:30238-30257 Msa1336750:intron 50.0%
TGATAGGGACTTGGGTGTCA+TGG - tig0001315:30247-30266 Msa1336750:intron 50.0%
! GATAGGGACTTGGGTGTCAT+GGG - tig0001315:30248-30267 Msa1336750:intron 50.0%
! ATAGGGACTTGGGTGTCATG+GGG - tig0001315:30249-30268 Msa1336750:intron 50.0%
AGGTGGGTCATGGAAAAGCA+TGG + tig0001315:30592-30611 None:intergenic 50.0%
! CCGCTTAGCAACAAGCGTTT+TGG + tig0001315:31257-31276 None:intergenic 50.0%
TCAATCCTGCACCATAGTGG+AGG + tig0001315:31688-31707 None:intergenic 50.0%
GGTGCAGGATTGATAGGCTA+TGG - tig0001315:31695-31714 Msa1336750:intron 50.0%
!! TCCCCATCCAGGTGTTTTGA+AGG - tig0001315:31720-31739 Msa1336750:intron 50.0%
CCCTTCAAAACACCTGGATG+GGG + tig0001315:31724-31743 None:intergenic 50.0%
!! CCCCATCCAGGTGTTTTGAA+GGG - tig0001315:31721-31740 Msa1336750:intron 50.0%
CCCCTTCAAAACACCTGGAT+GGG + tig0001315:31725-31744 None:intergenic 50.0%
!!! CCCATCCAGGTGTTTTGAAG+GGG - tig0001315:31722-31741 Msa1336750:intron 50.0%
ACCCCTTCAAAACACCTGGA+TGG + tig0001315:31726-31745 None:intergenic 50.0%
AGCTCTCAGGACAGCTTATG+AGG - tig0001315:31983-32002 Msa1336750:CDS 50.0%
TATTTACCCAAACGCCCCCT+TGG - tig0001315:32172-32191 Msa1336750:intron 50.0%
CAGTAACTGACTGACCAAGG+GGG + tig0001315:32189-32208 None:intergenic 50.0%
TAATCCATCACTGCCCTCAG+AGG - tig0001315:32522-32541 Msa1336750:intron 50.0%
! TTAACCTCTGAGGGCAGTGA+TGG + tig0001315:32529-32548 None:intergenic 50.0%
! TATGTGACCGGGAGTGTGAT+CGG + tig0001315:33119-33138 None:intergenic 50.0%
ACTGGGATGAGAAACCTGGA+TGG - tig0001315:33152-33171 Msa1336750:CDS 50.0%
CTGAAGATGATCACCCACCT+TGG - tig0001315:33197-33216 Msa1336750:CDS 50.0%
TTGGAGCTCAGGGAAAGCAG+AGG + tig0001315:28223-28242 None:intergenic 55.0%
TGAGCACCATGGATGTTGGC+TGG - tig0001315:28877-28896 Msa1336750:intron 55.0%
! GAGCACCATGGATGTTGGCT+GGG - tig0001315:28878-28897 Msa1336750:intron 55.0%
! AGCACCATGGATGTTGGCTG+GGG - tig0001315:28879-28898 Msa1336750:intron 55.0%
AGAACCCCAGCCAACATCCA+TGG + tig0001315:28886-28905 None:intergenic 55.0%
CCACAGAGAGTTGGGACCAT+CGG - tig0001315:29583-29602 Msa1336750:CDS 55.0%
ACGTATCAAAGCCCGGTCGT+TGG - tig0001315:30124-30143 Msa1336750:intron 55.0%
TATCAAAGCCCGGTCGTTGG+TGG - tig0001315:30127-30146 Msa1336750:intron 55.0%
!! CGGTCGTTGGTGGCTTAGAA+AGG - tig0001315:30137-30156 Msa1336750:intron 55.0%
TCATGCCTCCACTATGGTGC+AGG - tig0001315:31680-31699 Msa1336750:intron 55.0%
AGGCTATGGTTTCCCCATCC+AGG - tig0001315:31709-31728 Msa1336750:intron 55.0%
TCAGGGCCAAACTCTTCCTC+TGG + tig0001315:32472-32491 None:intergenic 55.0%
TGTGTGACCGATCACACTCC+CGG - tig0001315:33109-33128 Msa1336750:intron 55.0%
GATGATCACCCACCTTGGTG+AGG - tig0001315:33202-33221 Msa1336750:CDS 55.0%
CCGATGGTCCCAACTCTCTG+TGG + tig0001315:29586-29605 None:intergenic 60.0%
! GTTGGGACCATCGGTTGACG+AGG - tig0001315:29592-29611 Msa1336750:CDS 60.0%
CCACTGTCCTCGTCAACCGA+TGG + tig0001315:29602-29621 None:intergenic 60.0%
! CCATCGGTTGACGAGGACAG+TGG - tig0001315:29599-29618 Msa1336750:CDS 60.0%
CTCAGCAGCGGCAGTCAATG+AGG + tig0001315:30202-30221 None:intergenic 60.0%
GCATGGCTTCTCGTAGTCGG+TGG + tig0001315:30575-30594 None:intergenic 60.0%
!! GACTGACCAAGGGGGCGTTT+GGG + tig0001315:32181-32200 None:intergenic 60.0%
!! TGACTGACCAAGGGGGCGTT+TGG + tig0001315:32182-32201 None:intergenic 60.0%
!! GGAGGGATTGGCTTCCATCC+AGG + tig0001315:33169-33188 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0001315 gene 26515 33693 26515 ID=Msa1336750;Name=Msa1336750
tig0001315 mRNA 26515 33693 26515 ID=Msa1336750-mRNA-1;Parent=Msa1336750;Name=Msa1336750-mRNA-1;_AED=0.13;_eAED=0.13;_QI=96|1|1|1|0.92|0.85|14|471|631
tig0001315 exon 26515 27153 26515 ID=Msa1336750-mRNA-1:exon:862;Parent=Msa1336750-mRNA-1
tig0001315 exon 27269 27355 27269 ID=Msa1336750-mRNA-1:exon:861;Parent=Msa1336750-mRNA-1
tig0001315 exon 27449 27568 27449 ID=Msa1336750-mRNA-1:exon:860;Parent=Msa1336750-mRNA-1
tig0001315 exon 27665 27763 27665 ID=Msa1336750-mRNA-1:exon:859;Parent=Msa1336750-mRNA-1
tig0001315 exon 28416 28529 28416 ID=Msa1336750-mRNA-1:exon:858;Parent=Msa1336750-mRNA-1
tig0001315 exon 28728 28781 28728 ID=Msa1336750-mRNA-1:exon:857;Parent=Msa1336750-mRNA-1
tig0001315 exon 28889 28983 28889 ID=Msa1336750-mRNA-1:exon:856;Parent=Msa1336750-mRNA-1
tig0001315 exon 29578 29713 29578 ID=Msa1336750-mRNA-1:exon:855;Parent=Msa1336750-mRNA-1
tig0001315 exon 30502 30758 30502 ID=Msa1336750-mRNA-1:exon:854;Parent=Msa1336750-mRNA-1
tig0001315 exon 30912 31017 30912 ID=Msa1336750-mRNA-1:exon:853;Parent=Msa1336750-mRNA-1
tig0001315 exon 31198 31403 31198 ID=Msa1336750-mRNA-1:exon:852;Parent=Msa1336750-mRNA-1
tig0001315 exon 31758 32054 31758 ID=Msa1336750-mRNA-1:exon:851;Parent=Msa1336750-mRNA-1
tig0001315 exon 33117 33352 33117 ID=Msa1336750-mRNA-1:exon:850;Parent=Msa1336750-mRNA-1
tig0001315 exon 33677 33693 33677 ID=Msa1336750-mRNA-1:exon:849;Parent=Msa1336750-mRNA-1
tig0001315 five_prime_UTR 33677 33693 33677 ID=Msa1336750-mRNA-1:five_prime_utr;Parent=Msa1336750-mRNA-1
tig0001315 five_prime_UTR 33274 33352 33274 ID=Msa1336750-mRNA-1:five_prime_utr;Parent=Msa1336750-mRNA-1
tig0001315 CDS 33117 33273 33117 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 31758 32054 31758 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 31198 31403 31198 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 30912 31017 30912 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 30502 30758 30502 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 29578 29713 29578 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 28889 28983 28889 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 28728 28781 28728 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 28416 28529 28416 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 27665 27763 27665 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 27449 27568 27449 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 27269 27355 27269 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 CDS 26986 27153 26986 ID=Msa1336750-mRNA-1:cds;Parent=Msa1336750-mRNA-1
tig0001315 three_prime_UTR 26515 26985 26515 ID=Msa1336750-mRNA-1:three_prime_utr;Parent=Msa1336750-mRNA-1
Gene Sequence

>Msa1336750

ATGGCGTGTGAGGAAGTTGCACATTCAAGACCTCTCTTCCTCACGATCTACACTGTTGTCATCGTTGGCATCGTTGTTTCTTCCTTATACGTTTTTTCCGCTATACACTATTCTTCTACAACCTCTTCAGCTTGGTCCTCTTTTCCTCCTCTTTCAAATGAGGATTCTCGGCTCTCAGATCGAACACTTAACGCTTCTCAGTCAGAAACGATGCATGTTGTGTCCTCTGCTTTCCCTGAGCTCCAAAATGTGTCGAGAAAGCCTGTTTTGAATGTTCCTCCTCGCAATAAAAAGATGCCACCCTTGAAAGAGTTTAGACTGACCAAAGAATTGGTTCAACAAAGGGTGAAAGACAACATTATAATAGTTACATTTGGTAACTATGCATTCATGGACTTTATTCTGACTTGGGTTAAGCAATTGAATGATCTCGGAGTTTCCAATTATCTTGTTGGTGCAATGGACACAAAATTATTGGAGGCACTTTATTGGAAAGGGGTACCGGTTTTTGACATGAACAGCCATATGAGCACCATGGATGTTGGCTGGGGTTCTCCAACATTTCATAAGATGGGGAGGGAAAAAGTTATTTTGATAAACTCCATACTGCCTTTTGGTGTCGAACTGTTGATGTGTGATACTGACATGGTTTGGTTGAAGAACCCACTTCCATATCTTGCTCGTTATCCCGGAGCAGATGTTTTAACATCCAGTGATCAAGTTATACCAACAGTTGTTGATGATAGTCTGGAAGTTTGGAAAGAAGTTGGTGCGGCCTACAATATAGGAATTTTTCATTGGAGACCTACAGAGTCTGCGATTAAATTGGCAAAGGAATGGATGGAACTGCTTGTGGCAGATGATAAGATATGGGATCAGAATGGGTTTAATGATATTGTCCACAGAGAGTTGGGACCATCGGTTGACGAGGACAGTGGACTTTTTTATGCTTATGATGGAAATCTAAAGCTGGGAATTTTGCCTTCAAGTATCTTTTGCAGTGGTCATACATATTTTGTCCAGGGTATGTATCAGCAACTCAGGTTGGAGCCATATGCAGTGCACACAACATTTCAATATGCAGGCACAGAAGGAAAGCGCCACCGACTACGAGAAGCCATGCTTTTCCATGACCCACCTGAATACTATAATCCTCCTGGGGGTTTCTTGTCATTTAGGCCATCTATTCCAAAACGCTTGTTGCTAAGCGGAAAGCATACCATTGGATCACATTTTACCCTTATTAATTACCAAATGAAACAAATTAGGACTGCACTTGCAATTGCTTCCCTTCTGAACAGAACACTGGTCATGCCTCCACTATGGTGCAGGATTGATAGGCTATGGTTTCCCCATCCAGGTGTTTTGAAGGGGTCTATGACTAGACAGCCTTTTCTCTGTCCTTTGGATCATGTGTTTGAGGTGAACGCCATGTTAAATGAACTTCCAGAGGAAGAGTTTGGCCCTGATATCGATTTTAGAGAGTACTCCATACTTGATAATCCATCACTGCCCTCAGAGGTGAAAAAGTCGTGGCTTGATGTTCACCTCTGTAAAGAAGGAACCCAAGATTGTAATGCATCAAATAATGTAACTGTTGGGGGAGTACTTAAATTTCCAAAGCATAGCAATGAGGAAACGTTCATGAAAGTATTTTCGTCGTTCAATGATGTAAAAGTAATCCAGTTTTCTTCAATGCAAGAAGCATTTACAGGTTTCAAAGACAAGGAAAGGGAAGATAGATTCAGAAAACGACTTAAACACTACACCGGTATATGGTGTTGTGTGACCGATCACACTCCCGGTCACATATATTACGATATATACTGGGATGAGAAACCTGGATGGAAGCCAATCCCTCCTCAAACTTCTGAAGATGATCACCCACCTTGGTGA

Protein sequence

>Msa1336750

MACEEVAHSRPLFLTIYTVVIVGIVVSSLYVFSAIHYSSTTSSAWSSFPPLSNEDSRLSDRTLNASQSETMHVVSSAFPELQNVSRKPVLNVPPRNKKMPPLKEFRLTKELVQQRVKDNIIIVTFGNYAFMDFILTWVKQLNDLGVSNYLVGAMDTKLLEALYWKGVPVFDMNSHMSTMDVGWGSPTFHKMGREKVILINSILPFGVELLMCDTDMVWLKNPLPYLARYPGADVLTSSDQVIPTVVDDSLEVWKEVGAAYNIGIFHWRPTESAIKLAKEWMELLVADDKIWDQNGFNDIVHRELGPSVDEDSGLFYAYDGNLKLGILPSSIFCSGHTYFVQGMYQQLRLEPYAVHTTFQYAGTEGKRHRLREAMLFHDPPEYYNPPGGFLSFRPSIPKRLLLSGKHTIGSHFTLINYQMKQIRTALAIASLLNRTLVMPPLWCRIDRLWFPHPGVLKGSMTRQPFLCPLDHVFEVNAMLNELPEEEFGPDIDFREYSILDNPSLPSEVKKSWLDVHLCKEGTQDCNASNNVTVGGVLKFPKHSNEETFMKVFSSFNDVKVIQFSSMQEAFTGFKDKEREDRFRKRLKHYTGIWCCVTDHTPGHIYYDIYWDEKPGWKPIPPQTSEDDHPPW*