AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0839760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0839760 MtrunA17_Chr5g0408171 96.038 631 22 1 1 631 1 628 0.0 1262
Msa0839760 MtrunA17_Chr8g0369811 78.288 631 135 1 2 630 6 636 0.0 1032
Msa0839760 MtrunA17_Chr8g0367951 26.772 127 90 1 117 240 389 515 1.48e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0839760 AT2G35610.1 73.302 633 162 1 5 630 11 643 0.0 970
Msa0839760 AT1G70630.2 29.375 160 109 2 85 240 238 397 3.49e-15 79.3
Msa0839760 AT1G70630.1 29.375 160 109 2 85 240 238 397 3.49e-15 79.3
Msa0839760 AT1G70630.5 29.375 160 109 2 85 240 207 366 3.77e-15 79.0
Msa0839760 AT1G70630.7 29.375 160 109 2 85 240 375 534 5.31e-15 79.0
Msa0839760 AT1G70630.6 29.375 160 109 2 85 240 444 603 5.36e-15 79.0
Msa0839760 AT1G70630.4 29.375 160 109 2 85 240 423 582 6.24e-15 79.0
Msa0839760 AT1G70630.3 29.375 160 109 2 85 240 454 613 6.90e-15 79.0

Find 191 sgRNAs with CRISPR-Local

Find 2 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGCTTTCTCGACACATTT+TGG 0.152798 5_4:+14962310 None:intergenic
AATTATTGGAGGCACTTTAT+TGG 0.160135 5_4:-14961729 Msa0839760:CDS
ATGAATCACTGACACATTTA+TGG 0.176197 5_4:+14957158 None:intergenic
TGCATACTTGGTAATTAATA+AGG 0.202143 5_4:+14959245 None:intergenic
TTGCTTGTAATTAAAATAAT+AGG 0.226952 5_4:-14956922 Msa0839760:three_prime_UTR
CTTCTTGCATTGAAGAAAAC+TGG 0.235009 5_4:+14957655 None:intergenic
ATGCTCACCAACAAGATAAT+TGG 0.259758 5_4:+14962113 None:intergenic
TACTCTCTAAAATCGATATC+AGG 0.263759 5_4:+14958062 None:intergenic
AACATTGCAAATTAGAGAAT+TGG 0.271959 5_4:-14957044 Msa0839760:three_prime_UTR
TTGTCCAGATGAAACAAATT+AGG 0.276729 5_4:-14959130 Msa0839760:intron
TGCAATGGACACAAAATTAT+TGG 0.280229 5_4:-14961743 Msa0839760:CDS
CCAGGAGGATTATAGTATTC+AGG 0.288957 5_4:+14959940 None:intergenic
TATTTGATGCATTACAATCT+TGG 0.296555 5_4:+14957865 None:intergenic
ACATATATTACGATATATAC+TGG 0.302979 5_4:-14957415 Msa0839760:CDS
GACATCCTCAACATGGATAA+AGG 0.307970 5_4:+14957129 None:intergenic
CCGCTTAGCAACAAGCGTTT+TGG 0.310588 5_4:+14959295 None:intergenic
CCTTTGTTGAACCAATTCTT+TGG 0.316391 5_4:+14962230 None:intergenic
ATTTGGTAACTATGCATTCA+TGG 0.333268 5_4:-14962181 Msa0839760:CDS
TTGATGATAGTCTGGAAGTT+TGG 0.339802 5_4:-14961282 Msa0839760:CDS
ATAAACTCCATACTGCCTTT+TGG 0.344303 5_4:-14961604 Msa0839760:CDS
TACAGAGTCTGCGATTAAAT+TGG 0.349125 5_4:-14961059 Msa0839760:CDS
TCAATGCAAGAAGCATTTAC+AGG 0.351618 5_4:-14957645 Msa0839760:CDS
TTAAACACTACACCGGTATA+TGG 0.355690 5_4:-14957466 Msa0839760:CDS
ATGTTCATCGAAACACTATA+GGG 0.371885 5_4:-14957308 Msa0839760:three_prime_UTR
CATCAAATAATGTAACTGTT+GGG 0.379007 5_4:-14957851 Msa0839760:CDS
GTTTAGACTGACCAAAGAAT+TGG 0.380928 5_4:-14962241 Msa0839760:CDS
GGAGTTTCCAATTATCTTGT+TGG 0.383055 5_4:-14962120 Msa0839760:intron
CAACATCCATGGTGCTCATA+TGG 0.383723 5_4:+14961677 None:intergenic
ATTTGATGCATTACAATCTT+GGG 0.384536 5_4:+14957866 None:intergenic
TTCTCCAACATTTCATAAGA+TGG 0.386465 5_4:-14961647 Msa0839760:CDS
CAGTGATGGATTATCAAGTA+TGG 0.388316 5_4:+14958037 None:intergenic
CCGGGATAACGAGCAAGATA+TGG 0.388736 5_4:+14961349 None:intergenic
TATGTTCATCGAAACACTAT+AGG 0.390048 5_4:-14957309 Msa0839760:three_prime_UTR
CACTATGGTGCAGGATTGAT+AGG 0.392370 5_4:-14958860 Msa0839760:CDS
GTTTCCTCATTGCTATGCTT+TGG 0.396200 5_4:+14957813 None:intergenic
AACATTATAATAGTTACATT+TGG 0.397598 5_4:-14962198 Msa0839760:CDS
TCCTTTGGATCATGTGTTTG+AGG 0.399480 5_4:-14958778 Msa0839760:intron
TCATGGACTTTATTCTGACT+TGG 0.401737 5_4:-14962164 Msa0839760:CDS
GAACTTCCAGAGGAAGAGTT+TGG 0.403101 5_4:-14958086 Msa0839760:CDS
GTTGGTGCGGCCTACAATAT+AGG 0.429061 5_4:-14961100 Msa0839760:CDS
AACAGTTGTTGATGATAGTC+TGG 0.434242 5_4:-14961290 Msa0839760:CDS
GGTCAGTCTAAACTCTTTCA+AGG 0.435148 5_4:+14962251 None:intergenic
TTTAGGTCATGCCTCCACTA+TGG 0.437519 5_4:-14958875 Msa0839760:intron
TTGTGGCAGATGATAAGATA+TGG 0.442083 5_4:-14961015 Msa0839760:CDS
GCATACTTGGTAATTAATAA+GGG 0.442561 5_4:+14959246 None:intergenic
CGAGGAGGAACATTCAAAAC+AGG 0.443521 5_4:+14962291 None:intergenic
TGGAGGCACTTTATTGGAAA+GGG 0.444183 5_4:-14961723 Msa0839760:CDS
GATATTGTCCACAGAGAGTT+GGG 0.444371 5_4:-14960974 Msa0839760:CDS
TCAGAAGTTTGAGGAGGGAT+TGG 0.448194 5_4:+14957371 None:intergenic
CCATATCTTGCTCGTTATCC+CGG 0.452515 5_4:-14961349 Msa0839760:CDS
TTCGACACCAAAAGGCAGTA+TGG 0.454549 5_4:+14961597 None:intergenic
CTCTGGAAGTTCATTTAACA+TGG 0.457114 5_4:+14958097 None:intergenic
GGAGGGATTGGCTTCCATCC+AGG 0.457361 5_4:+14957383 None:intergenic
GCATCAAATAATGTAACTGT+TGG 0.458070 5_4:-14957852 Msa0839760:CDS
CCACTGCAAAAGATACTTGA+AGG 0.465347 5_4:+14960884 None:intergenic
CTTCTACAACCTCTTCAGCT+TGG 0.465576 5_4:-14963502 Msa0839760:CDS
ACATCCTCAACATGGATAAA+GGG 0.468668 5_4:+14957130 None:intergenic
GGATGTTAAAACATCTGCTC+CGG 0.469326 5_4:+14961330 None:intergenic
CAAAGAATTGGTTCAACAAA+GGG 0.478416 5_4:-14962229 Msa0839760:CDS
TCTCCAACATTTCATAAGAT+GGG 0.482806 5_4:-14961646 Msa0839760:CDS
AGGCTATGGTTTCCCCATCC+AGG 0.483154 5_4:-14958840 Msa0839760:CDS
TCAGGGCCAAACTCTTCCTC+TGG 0.484951 5_4:+14958080 None:intergenic
ACTTTATTGGAAAGGGGTAC+CGG 0.488262 5_4:-14961716 Msa0839760:CDS
TACTGACATGGTTTGGTTGA+AGG 0.488688 5_4:-14961560 Msa0839760:intron
CATGGACTTTATTCTGACTT+GGG 0.489839 5_4:-14962163 Msa0839760:CDS
CGATTAAATTGGCAAAGGAA+TGG 0.490912 5_4:-14961048 Msa0839760:CDS
TGTGTGATACTGACATGGTT+TGG 0.491270 5_4:-14961567 Msa0839760:CDS
GGATGTCAGTACTTAGTTGA+GGG 0.492243 5_4:-14957113 Msa0839760:three_prime_UTR
AGTCTGGAAGTTTGGAAAGA+AGG 0.492974 5_4:-14961274 Msa0839760:intron
CTCCCCATCTTATGAAATGT+TGG 0.493611 5_4:+14961643 None:intergenic
ATAAGATATGGGATCAGAAT+GGG 0.494577 5_4:-14961003 Msa0839760:CDS
ATAAAAGGGTTACTTGAAAG+AGG 0.496404 5_4:+14963467 None:intergenic
TTATGATGGAAATCTAAAGC+TGG 0.498264 5_4:-14960915 Msa0839760:CDS
TGTTGGTATAACTTGATCAC+TGG 0.499076 5_4:+14961309 None:intergenic
TTAACCTCTGAGGGCAGTGA+TGG 0.499809 5_4:+14958023 None:intergenic
ATCAACAGTTCGACACCAAA+AGG 0.500021 5_4:+14961589 None:intergenic
CCCCTTCAAAACACCTGGAT+GGG 0.500946 5_4:+14958827 None:intergenic
GATGTTCACCTCTGTAAAGA+AGG 0.504544 5_4:-14957891 Msa0839760:CDS
ACTGCACAATGAAGAGAAGA+AGG 0.505529 5_4:+14963681 None:intergenic
TGAGCACCATGGATGTTGGC+TGG 0.508658 5_4:-14961672 Msa0839760:CDS
TGATATTGTCCACAGAGAGT+TGG 0.510495 5_4:-14960975 Msa0839760:CDS
GATAAGATATGGGATCAGAA+TGG 0.511259 5_4:-14961004 Msa0839760:CDS
GGTGCAGGATTGATAGGCTA+TGG 0.512598 5_4:-14958854 Msa0839760:CDS
TCATGCCTCCACTATGGTGC+AGG 0.513667 5_4:-14958869 Msa0839760:CDS
ATCAAATAATGTAACTGTTG+GGG 0.514600 5_4:-14957850 Msa0839760:CDS
GTTAAGCAATTGAATGATCT+CGG 0.516251 5_4:-14962141 Msa0839760:CDS
TTGGAGGCACTTTATTGGAA+AGG 0.518007 5_4:-14961724 Msa0839760:CDS
AATGTTGTGTGCACTGCATA+TGG 0.519394 5_4:+14960027 None:intergenic
AGGGTATGTATCAGCAACTC+AGG 0.520087 5_4:-14960056 Msa0839760:CDS
CACACAACATTTCAATATGC+AGG 0.521713 5_4:-14960015 Msa0839760:CDS
TGCAGCCTCATCTCATATGT+TGG 0.523542 5_4:+14957018 None:intergenic
TATATCGTAATATATGTGAC+CGG 0.524119 5_4:+14957421 None:intergenic
TATAGTATTCAGGTGGGTCA+TGG 0.526762 5_4:+14959950 None:intergenic
AAAGCATAGCAATGAGGAAA+CGG 0.527987 5_4:-14957811 Msa0839760:intron
ATCTACACTGTTGTCATCGT+TGG 0.528331 5_4:-14963569 Msa0839760:CDS
TAAATTGGCAAAGGAATGGA+TGG 0.528455 5_4:-14961044 Msa0839760:CDS
TCACCAGTGTTCTGTTCAGA+AGG 0.530066 5_4:+14959087 None:intergenic
TGATCCAAAGGACAGAGAAA+AGG 0.530345 5_4:+14958789 None:intergenic
TCATTGTGCAGTGAAAATCA+TGG 0.530386 5_4:-14963670 Msa0839760:five_prime_UTR
ATATACTGGGATGAGAAACC+TGG 0.532396 5_4:-14957401 Msa0839760:CDS
AATTTAATCGCAGACTCTGT+AGG 0.534019 5_4:+14961061 None:intergenic
CCACAGAGAGTTGGGACCAT+CGG 0.535254 5_4:-14960966 Msa0839760:CDS
CATCTTCAGAAGTTTGAGGA+GGG 0.537277 5_4:+14957366 None:intergenic
AAAAGAGGACCAAGCTGAAG+AGG 0.545642 5_4:+14963493 None:intergenic
GCTAGAAGTTTATATTCAAG+AGG 0.546485 5_4:-14956956 Msa0839760:three_prime_UTR
TTTCAATATGCAGGCACAGA+AGG 0.546523 5_4:-14960006 Msa0839760:CDS
GTCAGTCTAAACTCTTTCAA+GGG 0.548005 5_4:+14962252 None:intergenic
TCTTAGTCTTCACAACGAGT+TGG 0.548375 5_4:+14957243 None:intergenic
AGACTATCATCAACAACTGT+TGG 0.549115 5_4:+14961292 None:intergenic
TGTGTGACCGATCACACTCC+CGG 0.550835 5_4:-14957440 Msa0839760:CDS
GAGCACCATGGATGTTGGCT+GGG 0.551672 5_4:-14961671 Msa0839760:CDS
CTGACACATTTATGGACACC+GGG 0.551803 5_4:+14957166 None:intergenic
TACGCCCTTTATCCATGTTG+AGG 0.554675 5_4:-14957134 Msa0839760:three_prime_UTR
CCTGAATACTATAATCCTCC+TGG 0.555188 5_4:-14959940 Msa0839760:intron
ACACTTATTGAAGTCATGCC+CGG 0.556796 5_4:-14957184 Msa0839760:three_prime_UTR
TATGATGGAAATCTAAAGCT+GGG 0.556906 5_4:-14960914 Msa0839760:CDS
GTGTAGATCGTGAGGAAGAG+AGG 0.558247 5_4:+14963584 None:intergenic
CATAAACAGAAGATATTGAA+AGG 0.558328 5_4:-14957277 Msa0839760:three_prime_UTR
TATGTGACCGGGAGTGTGAT+CGG 0.558850 5_4:+14957433 None:intergenic
CTAAGCGGAAAGCATACCAT+TGG 0.560834 5_4:-14959280 Msa0839760:CDS
TATGTATCAGCAACTCAGGT+TGG 0.561264 5_4:-14960052 Msa0839760:CDS
ACTTGAAAGAGGAGGAAAAG+AGG 0.562823 5_4:+14963478 None:intergenic
ACCCCTTCAAAACACCTGGA+TGG 0.563163 5_4:+14958826 None:intergenic
AAGGGTAAAATGTGATCCAA+TGG 0.568807 5_4:+14959264 None:intergenic
TGATCATCTTCAGAAGTTTG+AGG 0.571519 5_4:+14957362 None:intergenic
AGCACCATGGATGTTGGCTG+GGG 0.572999 5_4:-14961670 Msa0839760:CDS
AGGATGTCAGTACTTAGTTG+AGG 0.574833 5_4:-14957114 Msa0839760:three_prime_UTR
CCCTTCAAAACACCTGGATG+GGG 0.576084 5_4:+14958828 None:intergenic
GATGTTAAAACATCTGCTCC+GGG 0.576359 5_4:+14961331 None:intergenic
CTGAAGATGATCACCCACCT+TGG 0.580153 5_4:-14957352 Msa0839760:CDS
ACCTCAAACACATGATCCAA+AGG 0.580442 5_4:+14958777 None:intergenic
TGACATTTATTAACCTCTGA+GGG 0.581541 5_4:+14958014 None:intergenic
ACTGACACATTTATGGACAC+CGG 0.582245 5_4:+14957165 None:intergenic
CCAAAGAATTGGTTCAACAA+AGG 0.582324 5_4:-14962230 Msa0839760:CDS
ACTCTCTAAAATCGATATCA+GGG 0.584688 5_4:+14958063 None:intergenic
TTGACATTTATTAACCTCTG+AGG 0.585437 5_4:+14958013 None:intergenic
TAACGAGCAAGATATGGAAG+TGG 0.588038 5_4:+14961355 None:intergenic
TGTGGCAGATGATAAGATAT+GGG 0.588167 5_4:-14961014 Msa0839760:CDS
CTCCAACATTTCATAAGATG+GGG 0.588837 5_4:-14961645 Msa0839760:CDS
AACATTTCATAAGATGGGGA+GGG 0.590957 5_4:-14961641 Msa0839760:CDS
CATATATTACGATATATACT+GGG 0.592955 5_4:-14957414 Msa0839760:CDS
CAACATTTCATAAGATGGGG+AGG 0.592995 5_4:-14961642 Msa0839760:CDS
GGAGGATTATAGTATTCAGG+TGG 0.593240 5_4:+14959943 None:intergenic
CTTGGGTTCCTTCTTTACAG+AGG 0.594617 5_4:+14957883 None:intergenic
GAAATTGACCTCACCAAGGT+GGG 0.595017 5_4:+14957339 None:intergenic
ATAGACCCCTTCAAAACACC+TGG 0.595066 5_4:+14958822 None:intergenic
ATTTACAGGTTTCAAAGACA+AGG 0.595211 5_4:-14957631 Msa0839760:intron
TGTAGAAGAATAGTGTATAG+CGG 0.596162 5_4:+14963517 None:intergenic
CTATCAATCCTGCACCATAG+TGG 0.596448 5_4:+14958861 None:intergenic
CCAAAACGCTTGTTGCTAAG+CGG 0.599022 5_4:-14959295 Msa0839760:CDS
CATATGAGCACCATGGATGT+TGG 0.603158 5_4:-14961676 Msa0839760:CDS
AATGGACACAAAATTATTGG+AGG 0.604541 5_4:-14961740 Msa0839760:CDS
AGAACCCCAGCCAACATCCA+TGG 0.605293 5_4:+14961666 None:intergenic
GTCTCATTGAATAGTTGGTG+CGG 0.605394 5_4:-14961113 Msa0839760:intron
GTCTGCGATTAAATTGGCAA+AGG 0.607208 5_4:-14961053 Msa0839760:CDS
TTCCCTTCTGAACAGAACAC+TGG 0.608871 5_4:-14959090 Msa0839760:intron
GGAGGCACTTTATTGGAAAG+GGG 0.609745 5_4:-14961722 Msa0839760:CDS
GGTCACACAACACCATATAC+CGG 0.614742 5_4:+14957454 None:intergenic
CCGATGGTCCCAACTCTCTG+TGG 0.615254 5_4:+14960966 None:intergenic
ATTTCCAAAGCATAGCAATG+AGG 0.615304 5_4:-14957817 Msa0839760:CDS
AAAGCATGGCTTCTCGTAGT+CGG 0.615395 5_4:+14959974 None:intergenic
AACGAGCAAGATATGGAAGT+GGG 0.615612 5_4:+14961356 None:intergenic
CACCAGTGTTCTGTTCAGAA+GGG 0.620203 5_4:+14959088 None:intergenic
CCACTGTCCTCGTCAACCGA+TGG 0.622308 5_4:+14960950 None:intergenic
GGAATGGATGGAACTGCTTG+TGG 0.631261 5_4:-14961032 Msa0839760:CDS
TCATCTTCAGAAGTTTGAGG+AGG 0.634318 5_4:+14957365 None:intergenic
GGAAACCAACATATGAGATG+AGG 0.635491 5_4:-14957023 Msa0839760:three_prime_UTR
TCAAATAATGTAACTGTTGG+GGG 0.638239 5_4:-14957849 Msa0839760:CDS
AGGTGGGTCATGGAAAAGCA+TGG 0.640006 5_4:+14959960 None:intergenic
TCAATCCTGCACCATAGTGG+AGG 0.641393 5_4:+14958864 None:intergenic
AAAGGGTTACTTGAAAGAGG+AGG 0.644273 5_4:+14963470 None:intergenic
ATATCGTAATATATGTGACC+GGG 0.644860 5_4:+14957422 None:intergenic
GTTGGGACCATCGGTTGACG+AGG 0.646860 5_4:-14960957 Msa0839760:CDS
TGAAATTGACCTCACCAAGG+TGG 0.650431 5_4:+14957338 None:intergenic
TGTTCATCGAAACACTATAG+GGG 0.651954 5_4:-14957307 Msa0839760:three_prime_UTR
AAGTACTGACATCCTCAACA+TGG 0.653072 5_4:+14957122 None:intergenic
ACTGGGATGAGAAACCTGGA+TGG 0.657363 5_4:-14957397 Msa0839760:CDS
GATGATCACCCACCTTGGTG+AGG 0.658622 5_4:-14957347 Msa0839760:exon
TAATCCATCACTGCCCTCAG+AGG 0.663209 5_4:-14958027 Msa0839760:intron
CCATCGGTTGACGAGGACAG+TGG 0.663505 5_4:-14960950 Msa0839760:CDS
AGTCTAAACTCTTTCAAGGG+TGG 0.663897 5_4:+14962255 None:intergenic
TTGGAGCTCAGGGAAAGCAG+AGG 0.666154 5_4:+14962329 None:intergenic
GCATGGCTTCTCGTAGTCGG+TGG 0.666555 5_4:+14959977 None:intergenic
TGACAACAGTGTAGATCGTG+AGG 0.668405 5_4:+14963576 None:intergenic
AAACGACTTAAACACTACAC+CGG 0.668427 5_4:-14957473 Msa0839760:CDS
CATGTTAAATGAACTTCCAG+AGG 0.669463 5_4:-14958096 Msa0839760:CDS
GTTGATGTGTGATACTGACA+TGG 0.689315 5_4:-14961572 Msa0839760:CDS
GAGGATTATAGTATTCAGGT+GGG 0.690958 5_4:+14959944 None:intergenic
GAACAGCCATATGAGCACCA+TGG 0.702964 5_4:-14961683 Msa0839760:CDS
AAACAGAAGATATTGAAAGG+CGG 0.715428 5_4:-14957274 Msa0839760:three_prime_UTR
TTCTGAAATTGACCTCACCA+AGG 0.719723 5_4:+14957335 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTTGATTTTTCTATT+TGG + chr5_4:14956944-14956963 None:intergenic 10.0%
!! AAATTGTAAAAGATTTAAAA+TGG - chr5_4:14957001-14957020 Msa0839760:three_prime_UTR 10.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 14956883 14964056 14956883 ID=Msa0839760;Name=Msa0839760
chr5_4 mRNA 14956883 14964056 14956883 ID=Msa0839760-mRNA-1;Parent=Msa0839760;Name=Msa0839760-mRNA-1;_AED=0.13;_eAED=0.13;_QI=96|1|1|1|0.92|0.85|14|466|631
chr5_4 exon 14956883 14957516 14956883 ID=Msa0839760-mRNA-1:exon:6534;Parent=Msa0839760-mRNA-1
chr5_4 exon 14957632 14957718 14957632 ID=Msa0839760-mRNA-1:exon:6533;Parent=Msa0839760-mRNA-1
chr5_4 exon 14957812 14957931 14957812 ID=Msa0839760-mRNA-1:exon:6532;Parent=Msa0839760-mRNA-1
chr5_4 exon 14958028 14958126 14958028 ID=Msa0839760-mRNA-1:exon:6531;Parent=Msa0839760-mRNA-1
chr5_4 exon 14958779 14958892 14958779 ID=Msa0839760-mRNA-1:exon:6530;Parent=Msa0839760-mRNA-1
chr5_4 exon 14959091 14959144 14959091 ID=Msa0839760-mRNA-1:exon:6529;Parent=Msa0839760-mRNA-1
chr5_4 exon 14959252 14959346 14959252 ID=Msa0839760-mRNA-1:exon:6528;Parent=Msa0839760-mRNA-1
chr5_4 exon 14959941 14960076 14959941 ID=Msa0839760-mRNA-1:exon:6527;Parent=Msa0839760-mRNA-1
chr5_4 exon 14960865 14961121 14960865 ID=Msa0839760-mRNA-1:exon:6526;Parent=Msa0839760-mRNA-1
chr5_4 exon 14961275 14961380 14961275 ID=Msa0839760-mRNA-1:exon:6525;Parent=Msa0839760-mRNA-1
chr5_4 exon 14961561 14961766 14961561 ID=Msa0839760-mRNA-1:exon:6524;Parent=Msa0839760-mRNA-1
chr5_4 exon 14962121 14962417 14962121 ID=Msa0839760-mRNA-1:exon:6523;Parent=Msa0839760-mRNA-1
chr5_4 exon 14963480 14963715 14963480 ID=Msa0839760-mRNA-1:exon:6522;Parent=Msa0839760-mRNA-1
chr5_4 exon 14964040 14964056 14964040 ID=Msa0839760-mRNA-1:exon:6521;Parent=Msa0839760-mRNA-1
chr5_4 five_prime_UTR 14964040 14964056 14964040 ID=Msa0839760-mRNA-1:five_prime_utr;Parent=Msa0839760-mRNA-1
chr5_4 five_prime_UTR 14963637 14963715 14963637 ID=Msa0839760-mRNA-1:five_prime_utr;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14963480 14963636 14963480 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14962121 14962417 14962121 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14961561 14961766 14961561 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14961275 14961380 14961275 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14960865 14961121 14960865 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14959941 14960076 14959941 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14959252 14959346 14959252 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14959091 14959144 14959091 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14958779 14958892 14958779 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14958028 14958126 14958028 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14957812 14957931 14957812 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14957632 14957718 14957632 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 CDS 14957349 14957516 14957349 ID=Msa0839760-mRNA-1:cds;Parent=Msa0839760-mRNA-1
chr5_4 three_prime_UTR 14956883 14957348 14956883 ID=Msa0839760-mRNA-1:three_prime_utr;Parent=Msa0839760-mRNA-1
Gene Sequence

>Msa0839760

ATGGCGTGTGAGGAAGTTGCACATTCAAGACCTCTCTTCCTCACGATCTACACTGTTGTCATCGTTGGCATCGTTGTTTCTTCCTTATACGTTTTTTCCGCTATACACTATTCTTCTACAACCTCTTCAGCTTGGTCCTCTTTTCCTCCTCTTTCAAATGAGGATTCTCGGCTCTCAGATCGAACACTTAACGCTTCTCAGTCAGAAACGATGCATGTTGTGTCCTCTGCTTTCCCTGAGCTCCAAAATGTGTCGAGAAAGCCTGTTTTGAATGTTCCTCCTCGCAATAAAAAGATGCCACCCTTGAAAGAGTTTAGACTGACCAAAGAATTGGTTCAACAAAGGGTGAAAGACAACATTATAATAGTTACATTTGGTAACTATGCATTCATGGACTTTATTCTGACTTGGGTTAAGCAATTGAATGATCTCGGAGTTTCCAATTATCTTGTTGGTGCAATGGACACAAAATTATTGGAGGCACTTTATTGGAAAGGGGTACCGGTTTTTGACATGAACAGCCATATGAGCACCATGGATGTTGGCTGGGGTTCTCCAACATTTCATAAGATGGGGAGGGAAAAAGTTATTTTGATAAACTCCATACTGCCTTTTGGTGTCGAACTGTTGATGTGTGATACTGACATGGTTTGGTTGAAGAACCCACTTCCATATCTTGCTCGTTATCCCGGAGCAGATGTTTTAACATCCAGTGATCAAGTTATACCAACAGTTGTTGATGATAGTCTGGAAGTTTGGAAAGAAGTTGGTGCGGCCTACAATATAGGAATTTTTCATTGGAGACCTACAGAGTCTGCGATTAAATTGGCAAAGGAATGGATGGAACTGCTTGTGGCAGATGATAAGATATGGGATCAGAATGGGTTTAATGATATTGTCCACAGAGAGTTGGGACCATCGGTTGACGAGGACAGTGGACTTTTTTATGCTTATGATGGAAATCTAAAGCTGGGAATTTTGCCTTCAAGTATCTTTTGCAGTGGTCATACATATTTTGTCCAGGGTATGTATCAGCAACTCAGGTTGGAGCCATATGCAGTGCACACAACATTTCAATATGCAGGCACAGAAGGAAAGCGCCACCGACTACGAGAAGCCATGCTTTTCCATGACCCACCTGAATACTATAATCCTCCTGGGGGTTTCTTGTCATTTAGGCCATCTATTCCAAAACGCTTGTTGCTAAGCGGAAAGCATACCATTGGATCACATTTTACCCTTATTAATTACCAAATGAAACAAATTAGGACTGCACTTGCAATTGCTTCCCTTCTGAACAGAACACTGGTCATGCCTCCACTATGGTGCAGGATTGATAGGCTATGGTTTCCCCATCCAGGTGTTTTGAAGGGGTCTATGACTAGACAGCCTTTTCTCTGTCCTTTGGATCATGTGTTTGAGGTGAACGCCATGTTAAATGAACTTCCAGAGGAAGAGTTTGGCCCTGATATCGATTTTAGAGAGTACTCCATACTTGATAATCCATCACTGCCCTCAGAGGTGAAAAAGTCGTGGCTTGATGTTCACCTCTGTAAAGAAGGAACCCAAGATTGTAATGCATCAAATAATGTAACTGTTGGGGGAGTACTTAAATTTCCAAAGCATAGCAATGAGGAAACGTTCATGAAAGTATTTTCGTCGTTCAATGATGTAAAAGTAATCCAGTTTTCTTCAATGCAAGAAGCATTTACAGGTTTCAAAGACAAGGAAAGGGAAGATAGATTCAGAAAACGACTTAAACACTACACCGGTATATGGTGTTGTGTGACCGATCACACTCCCGGTCACATATATTACGATATATACTGGGATGAGAAACCTGGATGGAAGCCAATCCCTCCTCAAACTTCTGAAGATGATCACCCACCTTGGTGA
Protein sequence

>Msa0839760

MACEEVAHSRPLFLTIYTVVIVGIVVSSLYVFSAIHYSSTTSSAWSSFPPLSNEDSRLSDRTLNASQSETMHVVSSAFPELQNVSRKPVLNVPPRNKKMPPLKEFRLTKELVQQRVKDNIIIVTFGNYAFMDFILTWVKQLNDLGVSNYLVGAMDTKLLEALYWKGVPVFDMNSHMSTMDVGWGSPTFHKMGREKVILINSILPFGVELLMCDTDMVWLKNPLPYLARYPGADVLTSSDQVIPTVVDDSLEVWKEVGAAYNIGIFHWRPTESAIKLAKEWMELLVADDKIWDQNGFNDIVHRELGPSVDEDSGLFYAYDGNLKLGILPSSIFCSGHTYFVQGMYQQLRLEPYAVHTTFQYAGTEGKRHRLREAMLFHDPPEYYNPPGGFLSFRPSIPKRLLLSGKHTIGSHFTLINYQMKQIRTALAIASLLNRTLVMPPLWCRIDRLWFPHPGVLKGSMTRQPFLCPLDHVFEVNAMLNELPEEEFGPDIDFREYSILDNPSLPSEVKKSWLDVHLCKEGTQDCNASNNVTVGGVLKFPKHSNEETFMKVFSSFNDVKVIQFSSMQEAFTGFKDKEREDRFRKRLKHYTGIWCCVTDHTPGHIYYDIYWDEKPGWKPIPPQTSEDDHPPW*