Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719120 | RDX94003.1 | 72.981 | 644 | 109 | 12 | 1 | 620 | 1 | 603 | 0.0 | 901 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719120 | sp|F4JSE7|EDR2_ARATH | 63.694 | 628 | 148 | 11 | 3 | 621 | 2 | 558 | 0.0 | 753 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719120 | A0A371GU86 | 72.981 | 644 | 109 | 12 | 1 | 620 | 1 | 603 | 0.0 | 901 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0079790 | Msa0719120 | 0.819672 | 1.026925e-52 | -8.615850e-47 |
Msa0719120 | Msa0840610 | 0.837507 | 4.989340e-57 | -8.615850e-47 |
Msa0719120 | Msa1424560 | 0.810845 | 9.414340e-51 | -8.615850e-47 |
Msa0472780 | Msa0719120 | 0.825604 | 4.281092e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719120 | MtrunA17_Chr5g0409581 | 87.652 | 494 | 48 | 5 | 137 | 621 | 73 | 562 | 0.0 | 867 |
Msa0719120 | MtrunA17_Chr5g0409581 | 82.418 | 91 | 16 | 0 | 1 | 91 | 1 | 91 | 1.32e-40 | 158 |
Msa0719120 | MtrunA17_Chr1g0199661 | 28.438 | 429 | 258 | 8 | 251 | 633 | 126 | 551 | 5.26e-44 | 167 |
Msa0719120 | MtrunA17_Chr2g0326781 | 34.859 | 284 | 147 | 6 | 251 | 531 | 152 | 400 | 2.09e-39 | 154 |
Msa0719120 | MtrunA17_Chr2g0305001 | 21.831 | 568 | 336 | 17 | 7 | 561 | 26 | 498 | 6.13e-24 | 105 |
Msa0719120 | MtrunA17_Chr4g0065381 | 23.423 | 333 | 223 | 11 | 138 | 461 | 39 | 348 | 2.43e-15 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719120 | AT4G19040.1 | 63.694 | 628 | 148 | 11 | 3 | 621 | 2 | 558 | 0.0 | 753 |
Msa0719120 | AT4G19040.2 | 63.823 | 633 | 144 | 13 | 3 | 621 | 2 | 563 | 0.0 | 753 |
Msa0719120 | AT4G19040.3 | 63.349 | 633 | 144 | 14 | 3 | 621 | 2 | 560 | 0.0 | 740 |
Msa0719120 | AT5G45560.1 | 67.735 | 499 | 136 | 8 | 137 | 621 | 72 | 559 | 0.0 | 649 |
Msa0719120 | AT5G45560.1 | 76.404 | 89 | 21 | 0 | 3 | 91 | 2 | 90 | 6.47e-37 | 147 |
Msa0719120 | AT5G45560.2 | 64.579 | 511 | 143 | 7 | 156 | 637 | 1 | 502 | 0.0 | 632 |
Msa0719120 | AT2G28320.1 | 33.146 | 356 | 204 | 10 | 204 | 531 | 89 | 438 | 2.96e-45 | 172 |
Msa0719120 | AT3G54800.2 | 28.471 | 425 | 247 | 11 | 259 | 633 | 169 | 586 | 1.43e-43 | 167 |
Msa0719120 | AT3G54800.1 | 28.471 | 425 | 247 | 11 | 259 | 633 | 169 | 586 | 1.43e-43 | 167 |
Msa0719120 | AT5G35180.2 | 25.581 | 344 | 206 | 10 | 138 | 461 | 129 | 442 | 1.30e-21 | 100 |
Msa0719120 | AT5G35180.1 | 25.581 | 344 | 206 | 10 | 138 | 461 | 129 | 442 | 1.50e-21 | 100 |
Msa0719120 | AT5G35180.3 | 25.581 | 344 | 206 | 10 | 138 | 461 | 129 | 442 | 2.02e-21 | 99.0 |
Msa0719120 | AT5G35180.5 | 25.575 | 348 | 205 | 11 | 138 | 461 | 129 | 446 | 2.79e-20 | 95.9 |
Find 164 sgRNAs with CRISPR-Local
Find 646 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCAACACTGATTCAAATTA+TGG | 0.221013 | 5_1:-14125609 | Msa0719120:intron |
TCAATTAGCAGTGTCTTAAT+TGG | 0.225899 | 5_1:+14126176 | None:intergenic |
TGTTGCGGTTGACTGGTTTA+AGG | 0.232068 | 5_1:-14118174 | Msa0719120:CDS |
TACAATTACAATGGATTATC+AGG | 0.235313 | 5_1:-14126060 | Msa0719120:CDS |
ATCTTTGTTATGTACGTTAC+TGG | 0.239811 | 5_1:-14120791 | Msa0719120:CDS |
TGCAGGAAACCATACCATTT+TGG | 0.248440 | 5_1:+14123041 | None:intergenic |
GCCGCCATCCTTCATAAAAT+TGG | 0.261165 | 5_1:+14125697 | None:intergenic |
ACATCCAAGAGGCCCTAATT+TGG | 0.282417 | 5_1:-14124088 | Msa0719120:CDS |
GTCCACAACCAGGGTGTGTT+CGG | 0.304031 | 5_1:-14120433 | Msa0719120:CDS |
TCACATGAGGTACTTCGTTT+TGG | 0.309120 | 5_1:-14126567 | Msa0719120:CDS |
GTGATAATGCTCGGGATTGC+TGG | 0.325042 | 5_1:-14118373 | Msa0719120:CDS |
CAGATGGGATTGCAGTTTCC+AGG | 0.337351 | 5_1:-14121222 | Msa0719120:CDS |
TCCATTGTAATTGTATGATT+AGG | 0.338414 | 5_1:+14126068 | None:intergenic |
CAGCCACACTATTTAACATT+TGG | 0.347689 | 5_1:+14119466 | None:intergenic |
ATCGAGAGAAGTAGAGTTAA+CGG | 0.349342 | 5_1:+14119097 | None:intergenic |
CCTTCCAAATTAGGGCCTCT+TGG | 0.371002 | 5_1:+14124084 | None:intergenic |
ATTAAGACACTGCTAATTGA+TGG | 0.372917 | 5_1:-14126173 | Msa0719120:CDS |
CCTCAACTAACCTACCTTCC+TGG | 0.388315 | 5_1:+14121204 | None:intergenic |
TCTCTACAGGTTTACGTGAA+TGG | 0.391173 | 5_1:-14119226 | Msa0719120:intron |
AAGAAAACCGCAAGATAATC+AGG | 0.391974 | 5_1:-14126519 | Msa0719120:intron |
GCAGATTGATCTGAAGGGTT+GGG | 0.394712 | 5_1:-14119529 | Msa0719120:CDS |
GATCCCCAGGTTTAGTGCTC+AGG | 0.397692 | 5_1:-14123314 | Msa0719120:intron |
ATAATTTGAATCAGTGTTGC+CGG | 0.406625 | 5_1:+14125611 | None:intergenic |
AACGAACTCCGACGAGAAAT+CGG | 0.417559 | 5_1:-14126932 | Msa0719120:five_prime_UTR |
AACTGTAGAGTGGAGGATAG+AGG | 0.417822 | 5_1:-14126149 | Msa0719120:CDS |
GGCGGCGCCACACTCGGATA+TGG | 0.417951 | 5_1:-14125680 | Msa0719120:CDS |
TGGATCTTGTTGCGGTTGAC+TGG | 0.418651 | 5_1:-14118181 | Msa0719120:CDS |
AGAAAAGAACCATCGGGTTA+TGG | 0.420037 | 5_1:-14124248 | Msa0719120:intron |
AAGGAAAATTGCGAACGAAA+TGG | 0.422467 | 5_1:+14126684 | None:intergenic |
CGAAATGATGATGGAAGTTA+TGG | 0.424771 | 5_1:-14120765 | Msa0719120:intron |
CCACACTATTTAACATTTGG+CGG | 0.425322 | 5_1:+14119469 | None:intergenic |
TCCTGCAGGAAAACATCTAA+TGG | 0.427399 | 5_1:-14118201 | Msa0719120:CDS |
AGGTAGGTTAGTTGAGGAGG+TGG | 0.430771 | 5_1:-14121198 | Msa0719120:CDS |
TCCACAACCAGGGTGTGTTC+GGG | 0.432015 | 5_1:-14120432 | Msa0719120:CDS |
AGGTTAGTTGAGGAGGTGGA+TGG | 0.443006 | 5_1:-14121194 | Msa0719120:CDS |
TCTTTATCACCGACTTCAGC+TGG | 0.444993 | 5_1:-14121159 | Msa0719120:CDS |
CGGAGTTCGTTCGCCGGGAT+CGG | 0.445137 | 5_1:+14126944 | None:intergenic |
AGCGTCATTCAAATTTGTTA+AGG | 0.445308 | 5_1:-14123276 | Msa0719120:CDS |
ATATATTTGTTACCATTTGA+CGG | 0.450881 | 5_1:+14123724 | None:intergenic |
CTCATCGCCGGTGCCAGAGC+TGG | 0.451480 | 5_1:+14126786 | None:intergenic |
GAGCATTCCTTTCATCTGAC+TGG | 0.451854 | 5_1:+14119198 | None:intergenic |
GTTCCATGATCTTCCAGCTC+TGG | 0.453095 | 5_1:-14126799 | Msa0719120:five_prime_UTR |
CTCGTCGGAGTTCGTTCGCC+GGG | 0.453340 | 5_1:+14126939 | None:intergenic |
GAGCTGGAAGATCATGGAAC+TGG | 0.457130 | 5_1:+14126802 | None:intergenic |
GAGCTATAGTAGAGCGATGA+AGG | 0.462204 | 5_1:-14122792 | Msa0719120:CDS |
TTGTTAAGGAGGACAACAAT+TGG | 0.467904 | 5_1:-14123262 | Msa0719120:CDS |
ACAAATCTGGGATGGACAAT+GGG | 0.469891 | 5_1:-14123690 | Msa0719120:CDS |
AGGAGGACAACAATTGGAAA+TGG | 0.476365 | 5_1:-14123256 | Msa0719120:CDS |
GTCCTGGGCCTCCCATTTCG+AGG | 0.476760 | 5_1:+14119570 | None:intergenic |
TTTATGAGCTGCAGGGCCTC+CGG | 0.481132 | 5_1:-14123164 | Msa0719120:intron |
TCGGCGTAAATTACCCGAAA+AGG | 0.483197 | 5_1:+14118403 | None:intergenic |
TCTGCTTCGGCGAGATCGAT+TGG | 0.486589 | 5_1:+14126744 | None:intergenic |
TCCTCTTCTCCAGCTTCCGC+CGG | 0.489814 | 5_1:-14126718 | Msa0719120:five_prime_UTR |
AATTGAGTATGTCATTGATC+AGG | 0.491233 | 5_1:-14124057 | Msa0719120:intron |
AATGCTTCCTTGAGAAAGCT+TGG | 0.491262 | 5_1:+14123080 | None:intergenic |
TGCAGATTGATCTGAAGGGT+TGG | 0.495326 | 5_1:-14119530 | Msa0719120:CDS |
TTGCCGGTGGCAGACCATGC+TGG | 0.495357 | 5_1:+14125627 | None:intergenic |
CTAATCGCCGTCACCGATCC+CGG | 0.495640 | 5_1:-14126957 | Msa0719120:five_prime_UTR |
TCGAAATTCGAATTCAGCAT+TGG | 0.502440 | 5_1:+14126884 | None:intergenic |
GGTTAGTTGAGGAGGTGGAT+GGG | 0.504869 | 5_1:-14121193 | Msa0719120:CDS |
TCTCGTCGGAGTTCGTTCGC+CGG | 0.506494 | 5_1:+14126938 | None:intergenic |
AAGATGCTGAACTTGTGTCC+TGG | 0.507164 | 5_1:+14119554 | None:intergenic |
TCGTTCGCCGGGATCGGTGA+CGG | 0.507947 | 5_1:+14126950 | None:intergenic |
AACCTCGAAATGGGAGGCCC+AGG | 0.508833 | 5_1:-14119572 | Msa0719120:CDS |
GAGCTTGTGATGAGCATGGA+TGG | 0.509047 | 5_1:-14122731 | Msa0719120:CDS |
GATAAGTCAATCTCATCATC+GGG | 0.511218 | 5_1:+14118428 | None:intergenic |
TCGTCGAAAGTCGTGTATGA+AGG | 0.511729 | 5_1:-14126635 | Msa0719120:CDS |
TGGGAAGACGGCTTCTTCCT+CGG | 0.513528 | 5_1:-14123671 | Msa0719120:CDS |
TAGTAGAGCGATGAAGGCTG+TGG | 0.514793 | 5_1:-14122786 | Msa0719120:CDS |
GACCATGTGGCTAAGCGTCC+TGG | 0.518533 | 5_1:-14118137 | Msa0719120:CDS |
TCTTATGCAGATTGATCTGA+AGG | 0.519053 | 5_1:-14119535 | Msa0719120:CDS |
GTGCCAGAGCTGGAAGATCA+TGG | 0.519339 | 5_1:+14126796 | None:intergenic |
AGATGCTGAACTTGTGTCCT+GGG | 0.519406 | 5_1:+14119555 | None:intergenic |
CAGGGTGCACAACCGTCAAA+TGG | 0.519973 | 5_1:-14123736 | Msa0719120:CDS |
CCAGGAAGGTAGGTTAGTTG+AGG | 0.520160 | 5_1:-14121204 | Msa0719120:CDS |
GTCATTCAAATTTGTTAAGG+AGG | 0.522240 | 5_1:-14123273 | Msa0719120:CDS |
TACAAATCTGGGATGGACAA+TGG | 0.522313 | 5_1:-14123691 | Msa0719120:CDS |
GCCCGAACACACCCTGGTTG+TGG | 0.522848 | 5_1:+14120431 | None:intergenic |
GATAACTGTGGTCCACAACC+AGG | 0.523683 | 5_1:-14120443 | Msa0719120:CDS |
ATCACCGACTTCAGCTGGAC+TGG | 0.524641 | 5_1:-14121154 | Msa0719120:CDS |
AAATTCGAATTCAGCATTGG+CGG | 0.526955 | 5_1:+14126887 | None:intergenic |
AGATAAGTCAATCTCATCAT+CGG | 0.531970 | 5_1:+14118427 | None:intergenic |
CTCACTTGTGCTGCACAACC+AGG | 0.532680 | 5_1:+14118119 | None:intergenic |
GAGAACATATTAACCATGAC+AGG | 0.533421 | 5_1:+14119164 | None:intergenic |
AAGCTTTCTCAAGGAAGCAT+TGG | 0.534826 | 5_1:-14123078 | Msa0719120:CDS |
CAGATTGATCTGAAGGGTTG+GGG | 0.541421 | 5_1:-14119528 | Msa0719120:CDS |
AGCATTCCTTTCATCTGACT+GGG | 0.543386 | 5_1:+14119199 | None:intergenic |
TACTGGCGTCGAAATGATGA+TGG | 0.544637 | 5_1:-14120774 | Msa0719120:CDS |
TCCTAATCATACAATTACAA+TGG | 0.545446 | 5_1:-14126069 | Msa0719120:CDS |
TTCATTGTGGCAGGTTTGTG+TGG | 0.545859 | 5_1:-14120821 | Msa0719120:intron |
ATCGCTCTACTATAGCTCCT+TGG | 0.547110 | 5_1:+14122797 | None:intergenic |
AGAGGATTGAAGACGCATCA+TGG | 0.548036 | 5_1:-14126131 | Msa0719120:CDS |
ATCATCGGGCTCTTCATCCA+AGG | 0.552251 | 5_1:+14118442 | None:intergenic |
GAGAAGAGGAATCTCTGCTT+CGG | 0.554128 | 5_1:+14126731 | None:intergenic |
ACAAGAATTTCAAACTTCGA+AGG | 0.554929 | 5_1:+14126665 | None:intergenic |
CGAAAGTCGTGTATGAAGGA+TGG | 0.554950 | 5_1:-14126631 | Msa0719120:CDS |
AGATGATCGTGATAATGCTC+GGG | 0.555372 | 5_1:-14118381 | Msa0719120:CDS |
TACACGACTTTCGACGACAT+CGG | 0.556335 | 5_1:+14126641 | None:intergenic |
ATTGCAGTTTCCAGGAAGGT+AGG | 0.557363 | 5_1:-14121214 | Msa0719120:CDS |
ATCGGTGACGGCGATTAGAT+CGG | 0.559452 | 5_1:+14126962 | None:intergenic |
GAAGGATGGATGGTGAGATA+TGG | 0.559973 | 5_1:-14126617 | Msa0719120:CDS |
TATGGTGGCGGTCAGTATGC+CGG | 0.560769 | 5_1:-14125662 | Msa0719120:CDS |
TCTTCTGATTTACTAATCAG+AGG | 0.562711 | 5_1:-14126098 | Msa0719120:CDS |
TTTCCAGCATGGTCTGCCAC+CGG | 0.563540 | 5_1:-14125630 | Msa0719120:CDS |
TGAACTGTGAAGGCTCCTGC+AGG | 0.564586 | 5_1:-14118215 | Msa0719120:intron |
AAGGATGGCGGCGCCACACT+CGG | 0.564966 | 5_1:-14125686 | Msa0719120:CDS |
CAAGAAAGAAAAGAACCATC+GGG | 0.566625 | 5_1:-14124254 | Msa0719120:CDS |
GGAAGGTAGGTTAGTTGAGG+AGG | 0.567781 | 5_1:-14121201 | Msa0719120:CDS |
AATTCTACCTGATTATCTTG+CGG | 0.567901 | 5_1:+14126512 | None:intergenic |
ACATCTAATGGATCTTGTTG+CGG | 0.567924 | 5_1:-14118189 | Msa0719120:CDS |
GCCGGCGGAAGCTGGAGAAG+AGG | 0.570410 | 5_1:+14126717 | None:intergenic |
GAGATGATCGTGATAATGCT+CGG | 0.570486 | 5_1:-14118382 | Msa0719120:CDS |
TCTTCTCCAGCTTCCGCCGG+CGG | 0.575586 | 5_1:-14126715 | Msa0719120:five_prime_UTR |
TAACAAAATTCTCAATTCCG+TGG | 0.576519 | 5_1:-14126857 | Msa0719120:five_prime_UTR |
TGATCTTCCAGCTCTGGCAC+CGG | 0.576690 | 5_1:-14126793 | Msa0719120:five_prime_UTR |
TTTGGCGGAGACAATGCTGC+TGG | 0.576911 | 5_1:+14119484 | None:intergenic |
CCCCAGGTTTAGTGCTCAGG+AGG | 0.578653 | 5_1:-14123311 | Msa0719120:intron |
CTTAAATGCATGCAGCATCA+GGG | 0.579159 | 5_1:-14123754 | Msa0719120:intron |
AGCTTGTGATGAGCATGGAT+GGG | 0.582177 | 5_1:-14122730 | Msa0719120:CDS |
TCAATAACCAAGCTTTCTCA+AGG | 0.582360 | 5_1:-14123087 | Msa0719120:CDS |
AACGTACATAACAAAGATCA+CGG | 0.583728 | 5_1:+14120796 | None:intergenic |
CCAAGAGGCCCTAATTTGGA+AGG | 0.584955 | 5_1:-14124084 | Msa0719120:CDS |
GATTGCTGGAAGATATCTGA+TGG | 0.586915 | 5_1:-14118359 | Msa0719120:CDS |
ACAAGAAAGAAAAGAACCAT+CGG | 0.587114 | 5_1:-14124255 | Msa0719120:CDS |
TTAACCATGACAGGAATTCG+TGG | 0.587521 | 5_1:+14119173 | None:intergenic |
CCGCCAAATGTTAAATAGTG+TGG | 0.593692 | 5_1:-14119469 | Msa0719120:CDS |
GATGGATGGTGAGATATGGC+CGG | 0.595048 | 5_1:-14126613 | Msa0719120:CDS |
AACCAGGACGCTTAGCCACA+TGG | 0.595404 | 5_1:+14118135 | None:intergenic |
GTGAATTTATAACTCATCGC+CGG | 0.595717 | 5_1:+14126774 | None:intergenic |
TGGGATGGACAATGGGAAGA+CGG | 0.597017 | 5_1:-14123683 | Msa0719120:CDS |
GTTCTTCTCCGATTTCTCGT+CGG | 0.599485 | 5_1:+14126924 | None:intergenic |
CAAATGTTAAATAGTGTGGC+TGG | 0.601388 | 5_1:-14119465 | Msa0719120:intron |
GCCACACTCGGATATGGTGG+CGG | 0.602588 | 5_1:-14125674 | Msa0719120:CDS |
TATCTGTCATGGCAGTGTCA+TGG | 0.606231 | 5_1:-14125720 | Msa0719120:intron |
CCTTAAAACCTCGAAATGGG+AGG | 0.607314 | 5_1:-14119578 | Msa0719120:CDS |
TGGGATTGCAGTTTCCAGGA+AGG | 0.608898 | 5_1:-14121218 | Msa0719120:CDS |
TCCTCCACGAATTCCTGTCA+TGG | 0.610999 | 5_1:-14119177 | Msa0719120:CDS |
TTACTGGCTTTCACGATCCG+AGG | 0.613541 | 5_1:+14123654 | None:intergenic |
AGACAATGCTGCTGGAAAGA+CGG | 0.616639 | 5_1:+14119492 | None:intergenic |
ACGTACATAACAAAGATCAC+GGG | 0.619284 | 5_1:+14120797 | None:intergenic |
GGCGCCACACTCGGATATGG+TGG | 0.621751 | 5_1:-14125677 | Msa0719120:CDS |
GATGAAGGCTGTGGGAGTTG+TGG | 0.622087 | 5_1:-14122777 | Msa0719120:CDS |
GAAGGCTGTGGGAGTTGTGG+AGG | 0.626557 | 5_1:-14122774 | Msa0719120:CDS |
GTCGATCGTTTATTCACATG+AGG | 0.627039 | 5_1:-14126580 | Msa0719120:CDS |
ATCAAGAACAGATAGTGTAG+TGG | 0.627577 | 5_1:-14126830 | Msa0719120:five_prime_UTR |
GGTTTGCCCAGTCAGATGAA+AGG | 0.631041 | 5_1:-14119205 | Msa0719120:CDS |
GAGCATTATCACGATCATCT+CGG | 0.632454 | 5_1:+14118384 | None:intergenic |
ATATGTGCCCGAACACACCC+TGG | 0.634812 | 5_1:+14120425 | None:intergenic |
AGTAGAGCGATGAAGGCTGT+GGG | 0.642808 | 5_1:-14122785 | Msa0719120:CDS |
GGAACCAGTCCAGCTGAAGT+CGG | 0.644960 | 5_1:+14121150 | None:intergenic |
TGAATATTCAGATGACGATG+AGG | 0.646331 | 5_1:-14119039 | Msa0719120:CDS |
TGATGGAAACTGTAGAGTGG+AGG | 0.646853 | 5_1:-14126156 | Msa0719120:CDS |
ATTTGAATCAGTGTTGCCGG+TGG | 0.651393 | 5_1:+14125614 | None:intergenic |
ATCAACTCACCATAACCCGA+TGG | 0.656939 | 5_1:+14124239 | None:intergenic |
TGATGAGCATGGATGGGACA+CGG | 0.657714 | 5_1:-14122724 | Msa0719120:CDS |
CTTATGCAGATTGATCTGAA+GGG | 0.662191 | 5_1:-14119534 | Msa0719120:CDS |
AGTCGTGTATGAAGGATGGA+TGG | 0.677491 | 5_1:-14126627 | Msa0719120:CDS |
ATAACTGTGGTCCACAACCA+GGG | 0.681233 | 5_1:-14120442 | Msa0719120:CDS |
AATTGATGGAAACTGTAGAG+TGG | 0.682414 | 5_1:-14126159 | Msa0719120:CDS |
ACCGCCACCATATCCGAGTG+TGG | 0.686183 | 5_1:+14125673 | None:intergenic |
CGTACATAACAAAGATCACG+GGG | 0.690974 | 5_1:+14120798 | None:intergenic |
AAAGTAAAATAATATAGACA+AGG | 0.706918 | 5_1:+14118088 | None:intergenic |
ACCATGACAGGAATTCGTGG+AGG | 0.722718 | 5_1:+14119176 | None:intergenic |
TCTAGAGAACATGATAACTG+TGG | 0.722765 | 5_1:-14120455 | Msa0719120:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAGTAAAAAATAAATACA+GGG | + | chr5_1:14120763-14120782 | None:intergenic | 10.0% |
!! | AATAAGTAAAAAATAAATAC+AGG | + | chr5_1:14120764-14120783 | None:intergenic | 10.0% |
!!! | TGATGATAATATTTTTTTTT+TGG | - | chr5_1:14121233-14121252 | Msa0719120:intron | 10.0% |
!! | TAAAATATTACAAGAAAATT+TGG | + | chr5_1:14124062-14124081 | None:intergenic | 10.0% |
!!! | AAAACAATTCATATTTTAAT+AGG | + | chr5_1:14124135-14124154 | None:intergenic | 10.0% |
!! | TATACATTAGTAAAAAAATA+TGG | + | chr5_1:14126326-14126345 | None:intergenic | 10.0% |
!! | TAGATAATTAAAGATATTAA+CGG | - | chr5_1:14126430-14126449 | Msa0719120:intron | 10.0% |
!!! | TGATTTTGATTATTTTCATT+CGG | - | chr5_1:14118599-14118618 | Msa0719120:intron | 15.0% |
!!! | TTTATTTTTGTGATGTTATT+AGG | - | chr5_1:14118872-14118891 | Msa0719120:intron | 15.0% |
!!! | ATAGGAATTTTTTTTTTGAA+TGG | + | chr5_1:14120483-14120502 | None:intergenic | 15.0% |
!! | ATTATATTTCAACTACAAAT+AGG | + | chr5_1:14120655-14120674 | None:intergenic | 15.0% |
!! | GTTAAATCATTATATGAAAA+AGG | + | chr5_1:14120915-14120934 | None:intergenic | 15.0% |
!!! | AATTTTTTCCATAAACAAAA+AGG | + | chr5_1:14122474-14122493 | None:intergenic | 15.0% |
!!! | CAACAATAATTTGTTATATT+GGG | - | chr5_1:14124444-14124463 | Msa0719120:intron | 15.0% |
!!! | TGTTTTTAATTACTTCAAAA+AGG | + | chr5_1:14124492-14124511 | None:intergenic | 15.0% |
!! | AATTAAAAACATTTAGTAGA+AGG | - | chr5_1:14124501-14124520 | Msa0719120:intron | 15.0% |
!! | TGAAAGTAAATAGAAAATAT+CGG | - | chr5_1:14125744-14125763 | Msa0719120:intron | 15.0% |
!! | AATACTATAATGATAATACA+TGG | - | chr5_1:14126526-14126545 | Msa0719120:CDS | 15.0% |
!! | ATACTATAATGATAATACAT+GGG | - | chr5_1:14126527-14126546 | Msa0719120:CDS | 15.0% |
!!! | AACAATGATAAATTTGATTT+GGG | + | chr5_1:14126813-14126832 | None:intergenic | 15.0% |
!! | AAACAATGATAAATTTGATT+TGG | + | chr5_1:14126814-14126833 | None:intergenic | 15.0% |
!! | AATCAAATTTATCATTGTTT+CGG | - | chr5_1:14126814-14126833 | Msa0719120:five_prime_UTR | 15.0% |
!! | AAAGTAAAATAATATAGACA+AGG | + | chr5_1:14126988-14127007 | None:intergenic | 15.0% |
!! | TAATCAAAATCATGAAGTAA+CGG | + | chr5_1:14118591-14118610 | None:intergenic | 20.0% |
!!! | GATTTTGATTATTTTCATTC+GGG | - | chr5_1:14118600-14118619 | Msa0719120:intron | 20.0% |
!! | ACAAGAAAATATTGTAAAGT+AGG | - | chr5_1:14119719-14119738 | Msa0719120:intron | 20.0% |
!!! | ATTTTGTTTGAACTTTGAAT+AGG | + | chr5_1:14120028-14120047 | None:intergenic | 20.0% |
!!! | TATGTGTTTCTTTAATTTCA+AGG | + | chr5_1:14120127-14120146 | None:intergenic | 20.0% |
!! | TGAAATTAAAGAAACACATA+CGG | - | chr5_1:14120127-14120146 | Msa0719120:intron | 20.0% |
!!! | ATAATTTTATACATGCTATC+TGG | - | chr5_1:14120319-14120338 | Msa0719120:intron | 20.0% |
!!! | TTTTACTACTTTACATTTAC+TGG | - | chr5_1:14120354-14120373 | Msa0719120:intron | 20.0% |
!!! | CATGATTTTAACAGTAAAAT+AGG | + | chr5_1:14120501-14120520 | None:intergenic | 20.0% |
!! | AAAAAATGCAGGAAAAATTA+TGG | + | chr5_1:14120729-14120748 | None:intergenic | 20.0% |
!! | TATCTAATGTACATTTATAC+TGG | - | chr5_1:14120860-14120879 | Msa0719120:intron | 20.0% |
!!! | TTGCTGACATTTTATAATTT+GGG | - | chr5_1:14120937-14120956 | Msa0719120:intron | 20.0% |
!!! | AATTTTTTCCTTCCAAATTA+GGG | + | chr5_1:14121000-14121019 | None:intergenic | 20.0% |
!!! | TATCTGTGTTCTTAAATTTT+TGG | - | chr5_1:14121088-14121107 | Msa0719120:intron | 20.0% |
!!! | AAAGAGACAATTTTTTTACA+TGG | - | chr5_1:14121145-14121164 | Msa0719120:intron | 20.0% |
!!! | TTTTGTAAATTCATCTTAGT+AGG | - | chr5_1:14121187-14121206 | Msa0719120:CDS | 20.0% |
!!! | ATATATTTGTTACCATTTGA+CGG | + | chr5_1:14121352-14121371 | None:intergenic | 20.0% |
!!! | ATTTCTTTTGAATACAAATC+TGG | - | chr5_1:14121370-14121389 | Msa0719120:intron | 20.0% |
!!! | TTTCTTTTGAATACAAATCT+GGG | - | chr5_1:14121371-14121390 | Msa0719120:intron | 20.0% |
!!! | ATAACATACGATATTGTTTT+TGG | - | chr5_1:14121737-14121756 | Msa0719120:intron | 20.0% |
!!! | CTACATTTCTTAGAATATTT+TGG | - | chr5_1:14122218-14122237 | Msa0719120:intron | 20.0% |
!!! | TTCTTATTCCTTTTTGTTTA+TGG | - | chr5_1:14122463-14122482 | Msa0719120:intron | 20.0% |
!! | TTACTTTATTGATAAGATAG+TGG | + | chr5_1:14122683-14122702 | None:intergenic | 20.0% |
!! | AGCTTAAAAATGTGTTTATA+AGG | + | chr5_1:14123714-14123733 | None:intergenic | 20.0% |
!!! | AAGCTATATCTTTTTCAATT+TGG | - | chr5_1:14123729-14123748 | Msa0719120:CDS | 20.0% |
!!! | AGCTATATCTTTTTCAATTT+GGG | - | chr5_1:14123730-14123749 | Msa0719120:CDS | 20.0% |
!! | TGTTAGATTATCTTTACATT+GGG | + | chr5_1:14123947-14123966 | None:intergenic | 20.0% |
!! | ATGTTAGATTATCTTTACAT+TGG | + | chr5_1:14123948-14123967 | None:intergenic | 20.0% |
!! | CTACAAATTATTATCAATGA+TGG | + | chr5_1:14123973-14123992 | None:intergenic | 20.0% |
!! | TGTTTAAACTATCTGAAAAA+TGG | - | chr5_1:14124183-14124202 | Msa0719120:intron | 20.0% |
!! | GTTTAAACTATCTGAAAAAT+GGG | - | chr5_1:14124184-14124203 | Msa0719120:intron | 20.0% |
!! | CAATATAATTAATTACTCTC+TGG | + | chr5_1:14124217-14124236 | None:intergenic | 20.0% |
!!! | GCAACAATAATTTGTTATAT+TGG | - | chr5_1:14124443-14124462 | Msa0719120:intron | 20.0% |
!!! | TTTTGCTAATAGTTGTTATA+AGG | - | chr5_1:14124791-14124810 | Msa0719120:intron | 20.0% |
!! | TTTGCTAATAGTTGTTATAA+GGG | - | chr5_1:14124792-14124811 | Msa0719120:intron | 20.0% |
!! | GTTTGTATCAATTACTAAAA+AGG | - | chr5_1:14124927-14124946 | Msa0719120:intron | 20.0% |
!!! | TTTTAGGATTTAAGATTTGA+TGG | + | chr5_1:14124976-14124995 | None:intergenic | 20.0% |
!! | AAATTGTCAATGAAATTTCA+TGG | - | chr5_1:14125429-14125448 | Msa0719120:intron | 20.0% |
!! | AATTGTCAATGAAATTTCAT+GGG | - | chr5_1:14125430-14125449 | Msa0719120:intron | 20.0% |
!!! | AAATAGAAATTCTGTTTTGA+TGG | - | chr5_1:14126010-14126029 | Msa0719120:intron | 20.0% |
!! | GTGTGAATATTTAATATTTC+AGG | - | chr5_1:14126165-14126184 | Msa0719120:CDS | 20.0% |
! | ACGAAAATCTAACTGAATTT+AGG | + | chr5_1:14118634-14118653 | None:intergenic | 25.0% |
! | TATTTCGATATGAAAAGTGA+AGG | - | chr5_1:14118725-14118744 | Msa0719120:intron | 25.0% |
! | ATTTCGATATGAAAAGTGAA+GGG | - | chr5_1:14118726-14118745 | Msa0719120:intron | 25.0% |
! | TCCTAATCATACAATTACAA+TGG | - | chr5_1:14119004-14119023 | Msa0719120:intron | 25.0% |
! | TCCATTGTAATTGTATGATT+AGG | + | chr5_1:14119008-14119027 | None:intergenic | 25.0% |
!!! | TACAATTACAATGGATTATC+AGG | - | chr5_1:14119013-14119032 | Msa0719120:CDS | 25.0% |
! | GAAATTGAAAATGCACTAAA+TGG | - | chr5_1:14119233-14119252 | Msa0719120:intron | 25.0% |
! | AATGGAATCTAGTAAATTGA+TGG | - | chr5_1:14119251-14119270 | Msa0719120:intron | 25.0% |
! | TAACTAAACTGTAAACCTAA+TGG | + | chr5_1:14119608-14119627 | None:intergenic | 25.0% |
! | TTAGGTTTACAGTTTAGTTA+TGG | - | chr5_1:14119608-14119627 | Msa0719120:intron | 25.0% |
! | TGCATAGATTAAGAAAAGAA+AGG | - | chr5_1:14119688-14119707 | Msa0719120:intron | 25.0% |
! | AGAAAATATTGTAAAGTAGG+AGG | - | chr5_1:14119722-14119741 | Msa0719120:intron | 25.0% |
! | TACCACACAAAAAAAGATTA+GGG | + | chr5_1:14119835-14119854 | None:intergenic | 25.0% |
! | TTACCACACAAAAAAAGATT+AGG | + | chr5_1:14119836-14119855 | None:intergenic | 25.0% |
! | TAATTAAACAATTTGACCAC+AGG | - | chr5_1:14120592-14120611 | Msa0719120:intron | 25.0% |
! | TATTTAAAAGTGGCATATAC+TGG | - | chr5_1:14120618-14120637 | Msa0719120:intron | 25.0% |
! | ATTTAAAAGTGGCATATACT+GGG | - | chr5_1:14120619-14120638 | Msa0719120:intron | 25.0% |
! | CAGTATAGTAAATCTCTAAA+TGG | + | chr5_1:14120688-14120707 | None:intergenic | 25.0% |
!!! | TTTACTTATTTTTGTGCAGA+TGG | - | chr5_1:14120774-14120793 | Msa0719120:CDS | 25.0% |
!! | GTTGCTGACATTTTATAATT+TGG | - | chr5_1:14120936-14120955 | Msa0719120:intron | 25.0% |
!!! | CAATTTTTTCCTTCCAAATT+AGG | + | chr5_1:14121001-14121020 | None:intergenic | 25.0% |
! | GCACATTTAATGAATACAAT+AGG | + | chr5_1:14121063-14121082 | None:intergenic | 25.0% |
! | AACAACATTACAGAAAAAGT+GGG | + | chr5_1:14121506-14121525 | None:intergenic | 25.0% |
! | AAACAACATTACAGAAAAAG+TGG | + | chr5_1:14121507-14121526 | None:intergenic | 25.0% |
! | GTATGTTATGAATATATACG+AGG | + | chr5_1:14121726-14121745 | None:intergenic | 25.0% |
!!! | TTTTCTGTCCTTTATTTTTC+TGG | - | chr5_1:14122191-14122210 | Msa0719120:intron | 25.0% |
! | TGGAAAAAATTGTTATGACA+TGG | - | chr5_1:14122483-14122502 | Msa0719120:intron | 25.0% |
! | GGAAAAAATTGTTATGACAT+GGG | - | chr5_1:14122484-14122503 | Msa0719120:intron | 25.0% |
! | TCTCTAAACATAGAATTAGA+TGG | + | chr5_1:14122550-14122569 | None:intergenic | 25.0% |
! | AGTATGATAACATTCTGATT+TGG | + | chr5_1:14123016-14123035 | None:intergenic | 25.0% |
!! | AGAGTTTAAGTTTACAAGAA+GGG | - | chr5_1:14123189-14123208 | Msa0719120:intron | 25.0% |
!!! | ATCTTACAAATTAGTTTGCA+AGG | + | chr5_1:14123277-14123296 | None:intergenic | 25.0% |
! | CTGAAAATGTGTTTATTAGT+GGG | + | chr5_1:14123307-14123326 | None:intergenic | 25.0% |
! | TCTGAAAATGTGTTTATTAG+TGG | + | chr5_1:14123308-14123327 | None:intergenic | 25.0% |
! | CTGAAAATGTGTTTATTAGT+GGG | + | chr5_1:14123307-14123326 | None:intergenic | 25.0% |
! | TCTGAAAATGTGTTTATTAG+TGG | + | chr5_1:14123308-14123327 | None:intergenic | 25.0% |
! | AAGATAAAGTGAATCTTGTA+TGG | - | chr5_1:14123761-14123780 | Msa0719120:intron | 25.0% |
!! | GATCATTCTTTTTGCATAAA+TGG | - | chr5_1:14124012-14124031 | Msa0719120:intron | 25.0% |
!!! | AAGAAAATTTGGTTCTATTG+CGG | + | chr5_1:14124051-14124070 | None:intergenic | 25.0% |
! | CGACAAAAATAATAATACAG+GGG | + | chr5_1:14124557-14124576 | None:intergenic | 25.0% |
! | CCGACAAAAATAATAATACA+GGG | + | chr5_1:14124558-14124577 | None:intergenic | 25.0% |
!!! | CCCTGTATTATTATTTTTGT+CGG | - | chr5_1:14124555-14124574 | Msa0719120:intron | 25.0% |
! | ACCGACAAAAATAATAATAC+AGG | + | chr5_1:14124559-14124578 | None:intergenic | 25.0% |
!! | AGAGAAGTCTATATTTTCTA+GGG | - | chr5_1:14124719-14124738 | Msa0719120:intron | 25.0% |
! | TAGTAATTGATACAAACACT+TGG | + | chr5_1:14124924-14124943 | None:intergenic | 25.0% |
! | TGTATCAATTACTAAAAAGG+TGG | - | chr5_1:14124930-14124949 | Msa0719120:intron | 25.0% |
! | TCTTAAATCCTAAAACCAAT+TGG | - | chr5_1:14124981-14125000 | Msa0719120:intron | 25.0% |
!!! | AACAAAAACCAATTGGTTTT+AGG | + | chr5_1:14124992-14125011 | None:intergenic | 25.0% |
!!! | AAAACCAATTGGTTTTTGTT+TGG | - | chr5_1:14124992-14125011 | Msa0719120:intron | 25.0% |
! | GCAACTGTCATTAAAATATT+CGG | - | chr5_1:14125021-14125040 | Msa0719120:intron | 25.0% |
! | ATAAGTTTCCTAGTAGTATA+AGG | - | chr5_1:14125080-14125099 | Msa0719120:intron | 25.0% |
! | TTCAAAACCTACATAAGAAT+AGG | + | chr5_1:14125114-14125133 | None:intergenic | 25.0% |
! | AGTGTTTGACTAACATTTAT+AGG | - | chr5_1:14125136-14125155 | Msa0719120:intron | 25.0% |
!! | GTATTGCAATATTTGTTACA+AGG | + | chr5_1:14125306-14125325 | None:intergenic | 25.0% |
!! | AATTTTCATCTATGAAGGTA+AGG | + | chr5_1:14125414-14125433 | None:intergenic | 25.0% |
!! | TTGACAATTTTCATCTATGA+AGG | + | chr5_1:14125419-14125438 | None:intergenic | 25.0% |
!! | TGTGATATAGAGTTTTCTTA+TGG | - | chr5_1:14125649-14125668 | Msa0719120:CDS | 25.0% |
! | GTAAATAGAAAATATCGGAA+TGG | - | chr5_1:14125749-14125768 | Msa0719120:intron | 25.0% |
!!! | ATTGGACATGTATTTTGAAA+CGG | + | chr5_1:14126267-14126286 | None:intergenic | 25.0% |
!!! | TGATAAATTTGATTTGGGAA+AGG | + | chr5_1:14126808-14126827 | None:intergenic | 25.0% |
TAACAAAATTCTCAATTCCG+TGG | - | chr5_1:14118216-14118235 | Msa0719120:intron | 30.0% | |
! | ATCTGTTCTTGATTTTTCCA+CGG | + | chr5_1:14118236-14118255 | None:intergenic | 30.0% |
ACAAGAATTTCAAACTTCGA+AGG | + | chr5_1:14118411-14118430 | None:intergenic | 30.0% | |
AATTCTACCTGATTATCTTG+CGG | + | chr5_1:14118564-14118583 | None:intergenic | 30.0% | |
! | TTGATTATTTTCATTCGGGT+TGG | - | chr5_1:14118604-14118623 | Msa0719120:intron | 30.0% |
!! | TGATTATTTTCATTCGGGTT+GGG | - | chr5_1:14118605-14118624 | Msa0719120:intron | 30.0% |
!!! | GTTTTTTGATGCAAATTCGA+TGG | - | chr5_1:14118652-14118671 | Msa0719120:intron | 30.0% |
! | TTTTAGTAGCATATTCTCTC+AGG | + | chr5_1:14118796-14118815 | None:intergenic | 30.0% |
TCAATTAGCAGTGTCTTAAT+TGG | + | chr5_1:14118900-14118919 | None:intergenic | 30.0% | |
ATTAAGACACTGCTAATTGA+TGG | - | chr5_1:14118900-14118919 | Msa0719120:intron | 30.0% | |
TCTTCTGATTTACTAATCAG+AGG | - | chr5_1:14118975-14118994 | Msa0719120:intron | 30.0% | |
! | GCATTTTCAATTTCCTAACA+GGG | + | chr5_1:14119227-14119246 | None:intergenic | 30.0% |
! | TGCATTTTCAATTTCCTAAC+AGG | + | chr5_1:14119228-14119247 | None:intergenic | 30.0% |
TTCAAGTCAAATATCTGTCA+TGG | - | chr5_1:14119342-14119361 | Msa0719120:intron | 30.0% | |
ATAATTTGAATCAGTGTTGC+CGG | + | chr5_1:14119465-14119484 | None:intergenic | 30.0% | |
AGCATTACTTTACTACATTG+AGG | + | chr5_1:14119540-14119559 | None:intergenic | 30.0% | |
! | TTCATTTGATGTCTTGTTGA+AGG | + | chr5_1:14119756-14119775 | None:intergenic | 30.0% |
ACCACACAAAAAAAGATTAG+GGG | + | chr5_1:14119834-14119853 | None:intergenic | 30.0% | |
ATGCATTCATTTGACATCTT+TGG | + | chr5_1:14119950-14119969 | None:intergenic | 30.0% | |
TGAACTTTGAATAGGTATAG+TGG | + | chr5_1:14120020-14120039 | None:intergenic | 30.0% | |
AACTACTTTACACAATGACT+AGG | + | chr5_1:14120393-14120412 | None:intergenic | 30.0% | |
!! | ATCATGAATGCTTTTAGAAG+AGG | - | chr5_1:14120515-14120534 | Msa0719120:intron | 30.0% |
!! | TCATGAATGCTTTTAGAAGA+GGG | - | chr5_1:14120516-14120535 | Msa0719120:intron | 30.0% |
!! | CCACTTTTAAATAAAACCTG+TGG | + | chr5_1:14120611-14120630 | None:intergenic | 30.0% |
!!! | CCACAGGTTTTATTTAAAAG+TGG | - | chr5_1:14120608-14120627 | Msa0719120:intron | 30.0% |
CTGCATATCTAAAAAAATGC+AGG | + | chr5_1:14120740-14120759 | None:intergenic | 30.0% | |
ACAAGAAAGAAAAGAACCAT+CGG | - | chr5_1:14120818-14120837 | Msa0719120:intron | 30.0% | |
AATTGAGTATGTCATTGATC+AGG | - | chr5_1:14121016-14121035 | Msa0719120:intron | 30.0% | |
TTTATCTCTCTGATGTAGAT+TGG | - | chr5_1:14121117-14121136 | Msa0719120:intron | 30.0% | |
! | TTTTGAATACAAATCTGGGA+TGG | - | chr5_1:14121375-14121394 | Msa0719120:intron | 30.0% |
CAGTCTTCTACAAAATTAAG+TGG | + | chr5_1:14121468-14121487 | None:intergenic | 30.0% | |
!! | AATGTTGTTTCCTATGTGAT+TGG | - | chr5_1:14121517-14121536 | Msa0719120:intron | 30.0% |
TAGGAATAATCCAATCACAT+AGG | + | chr5_1:14121530-14121549 | None:intergenic | 30.0% | |
! | AGTTCTACTGTATTTAGTTC+TGG | - | chr5_1:14121674-14121693 | Msa0719120:intron | 30.0% |
GAGGATATGCATGATAAAAA+TGG | + | chr5_1:14121704-14121723 | None:intergenic | 30.0% | |
TGTTATGAATATATACGAGG+AGG | + | chr5_1:14121723-14121742 | None:intergenic | 30.0% | |
!! | AGCGTCATTCAAATTTGTTA+AGG | - | chr5_1:14121797-14121816 | Msa0719120:intron | 30.0% |
!! | GTCATTCAAATTTGTTAAGG+AGG | - | chr5_1:14121800-14121819 | Msa0719120:intron | 30.0% |
! | GTCCAATCAAAAATTGATTC+CGG | + | chr5_1:14121931-14121950 | None:intergenic | 30.0% |
TATATCTTATCAGTGAATGC+AGG | + | chr5_1:14122052-14122071 | None:intergenic | 30.0% | |
CTCAAAAATTTCTTCACAAG+AGG | + | chr5_1:14122325-14122344 | None:intergenic | 30.0% | |
ACAAAGCAGCATAAAAAAAG+TGG | + | chr5_1:14122400-14122419 | None:intergenic | 30.0% | |
AATAATCAGTGTATGGAAGA+AGG | - | chr5_1:14122741-14122760 | Msa0719120:CDS | 30.0% | |
TATGGAAGAAGGAACAAAAA+TGG | - | chr5_1:14122752-14122771 | Msa0719120:CDS | 30.0% | |
ATGGAAGAAGGAACAAAAAT+GGG | - | chr5_1:14122753-14122772 | Msa0719120:CDS | 30.0% | |
ACTAATTGCTGAATCTGAAT+TGG | - | chr5_1:14122830-14122849 | Msa0719120:intron | 30.0% | |
AAAAAAAAGAGAAACAACCC+AGG | + | chr5_1:14122973-14122992 | None:intergenic | 30.0% | |
!! | GATAACATTCTGATTTGGAA+AGG | + | chr5_1:14123011-14123030 | None:intergenic | 30.0% |
GAATGTTATCATACTGATAC+AGG | - | chr5_1:14123021-14123040 | Msa0719120:intron | 30.0% | |
! | GAGAGTTTAAGTTTACAAGA+AGG | - | chr5_1:14123188-14123207 | Msa0719120:intron | 30.0% |
! | TTCTAAGAGTCTCATTCAAA+TGG | + | chr5_1:14123233-14123252 | None:intergenic | 30.0% |
TGAATGAGACTCTTAGAATT+TGG | - | chr5_1:14123235-14123254 | Msa0719120:intron | 30.0% | |
GAATGAGACTCTTAGAATTT+GGG | - | chr5_1:14123236-14123255 | Msa0719120:intron | 30.0% | |
!! | ACAAATTAGTTTGCAAGGTT+GGG | + | chr5_1:14123272-14123291 | None:intergenic | 30.0% |
!! | TACAAATTAGTTTGCAAGGT+TGG | + | chr5_1:14123273-14123292 | None:intergenic | 30.0% |
AGACCATATCTTATCTAACA+TGG | - | chr5_1:14123325-14123344 | Msa0719120:intron | 30.0% | |
GACCATATCTTATCTAACAT+GGG | - | chr5_1:14123326-14123345 | Msa0719120:intron | 30.0% | |
AGACCATATCTTATCTAACA+TGG | - | chr5_1:14123325-14123344 | Msa0719120:intron | 30.0% | |
GACCATATCTTATCTAACAT+GGG | - | chr5_1:14123326-14123345 | Msa0719120:intron | 30.0% | |
TTATTTGCATTGTTGCAGAT+GGG | - | chr5_1:14123836-14123855 | Msa0719120:intron | 30.0% | |
AACGTACATAACAAAGATCA+CGG | + | chr5_1:14124280-14124299 | None:intergenic | 30.0% | |
! | ATCTTTGTTATGTACGTTAC+TGG | - | chr5_1:14124282-14124301 | Msa0719120:CDS | 30.0% |
CATAAACTGAAAACTTTGAG+CGG | + | chr5_1:14124352-14124371 | None:intergenic | 30.0% | |
! | AAAGTTTTCAGTTTATGCGA+CGG | - | chr5_1:14124355-14124374 | Msa0719120:intron | 30.0% |
! | GAGAGAAGTCTATATTTTCT+AGG | - | chr5_1:14124718-14124737 | Msa0719120:intron | 30.0% |
! | GAGAAGTCTATATTTTCTAG+GGG | - | chr5_1:14124720-14124739 | Msa0719120:intron | 30.0% |
AAAGCCAAACAAAAACCAAT+TGG | + | chr5_1:14124999-14125018 | None:intergenic | 30.0% | |
AAGTTGTTTAAATCCATTCC+TGG | - | chr5_1:14125055-14125074 | Msa0719120:intron | 30.0% | |
AGTTGTTTAAATCCATTCCT+GGG | - | chr5_1:14125056-14125075 | Msa0719120:intron | 30.0% | |
TTTCCTAGTAGTATAAGGAT+GGG | - | chr5_1:14125085-14125104 | Msa0719120:intron | 30.0% | |
AACATTTATAGGAATACCCT+TGG | - | chr5_1:14125147-14125166 | Msa0719120:intron | 30.0% | |
ACATTTATAGGAATACCCTT+GGG | - | chr5_1:14125148-14125167 | Msa0719120:intron | 30.0% | |
CTCTAATAAATGATTCCCAA+GGG | + | chr5_1:14125166-14125185 | None:intergenic | 30.0% | |
ACTCTAATAAATGATTCCCA+AGG | + | chr5_1:14125167-14125186 | None:intergenic | 30.0% | |
TTGGGAATCATTTATTAGAG+TGG | - | chr5_1:14125166-14125185 | Msa0719120:intron | 30.0% | |
TGGGAATCATTTATTAGAGT+GGG | - | chr5_1:14125167-14125186 | Msa0719120:intron | 30.0% | |
ATTAAAAAAAAGCCATCCCT+TGG | - | chr5_1:14125210-14125229 | Msa0719120:intron | 30.0% | |
TTAAAAAAAAGCCATCCCTT+GGG | - | chr5_1:14125211-14125230 | Msa0719120:intron | 30.0% | |
!!! | ATGTGAAGCTATTTTTTCTC+CGG | - | chr5_1:14125250-14125269 | Msa0719120:intron | 30.0% |
TTCCTGCATATAAAAGATTC+CGG | + | chr5_1:14125272-14125291 | None:intergenic | 30.0% | |
! | TTCCCTACCCATATATTTTT+CGG | - | chr5_1:14125329-14125348 | Msa0719120:intron | 30.0% |
TGCATTCCCGAAAAATATAT+GGG | + | chr5_1:14125339-14125358 | None:intergenic | 30.0% | |
ATGCATTCCCGAAAAATATA+TGG | + | chr5_1:14125340-14125359 | None:intergenic | 30.0% | |
AATTTCATGGGTCTAAAAGT+TGG | - | chr5_1:14125442-14125461 | Msa0719120:intron | 30.0% | |
!! | GTCTAAAAGTTGGTTTGTAT+AGG | - | chr5_1:14125452-14125471 | Msa0719120:intron | 30.0% |
!! | TAAAAGTTGGTTTGTATAGG+TGG | - | chr5_1:14125455-14125474 | Msa0719120:intron | 30.0% |
GAAAAACTGATGATACAGAA+GGG | + | chr5_1:14125689-14125708 | None:intergenic | 30.0% | |
TGAAAAACTGATGATACAGA+AGG | + | chr5_1:14125690-14125709 | None:intergenic | 30.0% | |
AATAGAAAATATCGGAATGG+AGG | - | chr5_1:14125752-14125771 | Msa0719120:intron | 30.0% | |
! | GCCCAATTTTATATGATTTG+CGG | - | chr5_1:14125777-14125796 | Msa0719120:intron | 30.0% |
CCCGCAAATCATATAAAATT+GGG | + | chr5_1:14125781-14125800 | None:intergenic | 30.0% | |
!! | CCCAATTTTATATGATTTGC+GGG | - | chr5_1:14125778-14125797 | Msa0719120:intron | 30.0% |
TCCCGCAAATCATATAAAAT+TGG | + | chr5_1:14125782-14125801 | None:intergenic | 30.0% | |
!! | AATTTTATATGATTTGCGGG+AGG | - | chr5_1:14125781-14125800 | Msa0719120:intron | 30.0% |
!! | ATTTTATATGATTTGCGGGA+GGG | - | chr5_1:14125782-14125801 | Msa0719120:intron | 30.0% |
AATGCCAACACTATAAATGA+GGG | + | chr5_1:14126128-14126147 | None:intergenic | 30.0% | |
AAATGCCAACACTATAAATG+AGG | + | chr5_1:14126129-14126148 | None:intergenic | 30.0% | |
ATATTTCAGGCATTCCAAAT+TGG | - | chr5_1:14126178-14126197 | Msa0719120:CDS | 30.0% | |
ATAGTGCACATTGCAAAAAT+TGG | + | chr5_1:14126285-14126304 | None:intergenic | 30.0% | |
!! | CTTGGACATGTATTTTGAAA+CGG | - | chr5_1:14126488-14126507 | Msa0719120:intron | 30.0% |
GATTAGATATAATCAAGCCT+AGG | + | chr5_1:14126589-14126608 | None:intergenic | 30.0% | |
AGATAAGTCAATCTCATCAT+CGG | + | chr5_1:14126649-14126668 | None:intergenic | 30.0% | |
!! | GATTGACTTATCTTCCTTTT+CGG | - | chr5_1:14126656-14126675 | Msa0719120:exon | 30.0% |
!! | ATTGACTTATCTTCCTTTTC+GGG | - | chr5_1:14126657-14126676 | Msa0719120:exon | 30.0% |
!! | TTTTTGCTATGACAAGTCAA+AGG | - | chr5_1:14126764-14126783 | Msa0719120:five_prime_UTR | 30.0% |
GTTTAAGGACTCAAAAAGAA+TGG | - | chr5_1:14126914-14126933 | Msa0719120:five_prime_UTR | 30.0% | |
! | AAATTCGAATTCAGCATTGG+CGG | + | chr5_1:14118189-14118208 | None:intergenic | 35.0% |
TCGAAATTCGAATTCAGCAT+TGG | + | chr5_1:14118192-14118211 | None:intergenic | 35.0% | |
ATCAAGAACAGATAGTGTAG+TGG | - | chr5_1:14118243-14118262 | Msa0719120:intron | 35.0% | |
GTGAATTTATAACTCATCGC+CGG | + | chr5_1:14118302-14118321 | None:intergenic | 35.0% | |
AAGGAAAATTGCGAACGAAA+TGG | + | chr5_1:14118392-14118411 | None:intergenic | 35.0% | |
AAGAAAACCGCAAGATAATC+AGG | - | chr5_1:14118554-14118573 | Msa0719120:intron | 35.0% | |
TGGTTAAAGTCTTCACTTCA+TGG | - | chr5_1:14118672-14118691 | Msa0719120:intron | 35.0% | |
AATTGATGGAAACTGTAGAG+TGG | - | chr5_1:14118914-14118933 | Msa0719120:intron | 35.0% | |
CAATCTTGACGATCCATATA+TGG | - | chr5_1:14119054-14119073 | Msa0719120:CDS | 35.0% | |
! | ATGCATTGATAAGCGTTTAC+TGG | - | chr5_1:14119179-14119198 | Msa0719120:CDS | 35.0% |
TCTAGTAAATTGATGGAGTG+AGG | - | chr5_1:14119258-14119277 | Msa0719120:intron | 35.0% | |
! | TGTCATGGCCAATTTTATGA+AGG | - | chr5_1:14119368-14119387 | Msa0719120:intron | 35.0% |
! | ATGGCCAATTTTATGAAGGA+TGG | - | chr5_1:14119372-14119391 | Msa0719120:intron | 35.0% |
!! | GGCAACACTGATTCAAATTA+TGG | - | chr5_1:14119464-14119483 | Msa0719120:intron | 35.0% |
TTATGGTTGTTTACCACCAA+TGG | - | chr5_1:14119481-14119500 | Msa0719120:CDS | 35.0% | |
! | AATGTTTTCCTAGATGCCAT+TGG | + | chr5_1:14119500-14119519 | None:intergenic | 35.0% |
AAACCTAATGGCACACAATA+GGG | + | chr5_1:14119596-14119615 | None:intergenic | 35.0% | |
TAAACCTAATGGCACACAAT+AGG | + | chr5_1:14119597-14119616 | None:intergenic | 35.0% | |
!! | TTCCCATAGAAGGTATTCAT+GGG | + | chr5_1:14119647-14119666 | None:intergenic | 35.0% |
!! | ATTCCCATAGAAGGTATTCA+TGG | + | chr5_1:14119648-14119667 | None:intergenic | 35.0% |
AGTCAGAAAATTCCCATAGA+AGG | + | chr5_1:14119657-14119676 | None:intergenic | 35.0% | |
AAAAGATTAGGGGATTTCTC+TGG | + | chr5_1:14119824-14119843 | None:intergenic | 35.0% | |
!!! | TCCCCTAATCTTTTTTTGTG+TGG | - | chr5_1:14119830-14119849 | Msa0719120:intron | 35.0% |
! | TGTGAAAGCTTGGATTTTGA+AGG | + | chr5_1:14119919-14119938 | None:intergenic | 35.0% |
AAATCCAAGCTTTCACATTC+AGG | - | chr5_1:14119922-14119941 | Msa0719120:intron | 35.0% | |
TGAATAGGTATAGTGGTTTG+AGG | + | chr5_1:14120013-14120032 | None:intergenic | 35.0% | |
CGATGCAAGTAATAAACATC+AGG | + | chr5_1:14120181-14120200 | None:intergenic | 35.0% | |
! | GTTTGGGTTTATCAAAATGC+TGG | + | chr5_1:14120227-14120246 | None:intergenic | 35.0% |
AACGCTCGAGAGAATAAAAA+AGG | + | chr5_1:14120446-14120465 | None:intergenic | 35.0% | |
!! | CATGAATGCTTTTAGAAGAG+GGG | - | chr5_1:14120517-14120536 | Msa0719120:intron | 35.0% |
CAAGAAAGAAAAGAACCATC+GGG | - | chr5_1:14120819-14120838 | Msa0719120:intron | 35.0% | |
TTGATCAGGTATGTTTCATC+AGG | - | chr5_1:14121030-14121049 | Msa0719120:intron | 35.0% | |
TGATCAGGTATGTTTCATCA+GGG | - | chr5_1:14121031-14121050 | Msa0719120:intron | 35.0% | |
TTATCATCAACTTACACGAC+AGG | + | chr5_1:14121222-14121241 | None:intergenic | 35.0% | |
CAAAGCACATAAACACTTAC+TGG | + | chr5_1:14121438-14121457 | None:intergenic | 35.0% | |
AAGACTATCTTAAGGAGGAT+AGG | + | chr5_1:14121549-14121568 | None:intergenic | 35.0% | |
AATGCGAGAAGACTATCTTA+AGG | + | chr5_1:14121557-14121576 | None:intergenic | 35.0% | |
TTGTTAAGGAGGACAACAAT+TGG | - | chr5_1:14121811-14121830 | Msa0719120:intron | 35.0% | |
CAAGCAGAAAGGATACAAAA+TGG | + | chr5_1:14121844-14121863 | None:intergenic | 35.0% | |
! | TTTTGTATCCTTTCTGCTTG+TGG | - | chr5_1:14121844-14121863 | Msa0719120:intron | 35.0% |
TTTGTATCCTTTCTGCTTGT+GGG | - | chr5_1:14121845-14121864 | Msa0719120:intron | 35.0% | |
! | CTTTTCTTTTATGAGCTGCA+GGG | - | chr5_1:14121902-14121921 | Msa0719120:intron | 35.0% |
! | CAATCAAAAATTGATTCCGG+AGG | + | chr5_1:14121928-14121947 | None:intergenic | 35.0% |
! | CTCCGGAATCAATTTTTGAT+TGG | - | chr5_1:14121926-14121945 | Msa0719120:intron | 35.0% |
TCAATAACCAAGCTTTCTCA+AGG | - | chr5_1:14121986-14122005 | Msa0719120:intron | 35.0% | |
TTTGCAATGCCAAAATGGTA+TGG | - | chr5_1:14122023-14122042 | Msa0719120:intron | 35.0% | |
GTAGCACACCAGAAAAATAA+AGG | + | chr5_1:14122202-14122221 | None:intergenic | 35.0% | |
ATAAAGAACCAACGAGAAGA+TGG | + | chr5_1:14122252-14122271 | None:intergenic | 35.0% | |
TAACTTTAGGTGCTTTGACT+AGG | + | chr5_1:14122596-14122615 | None:intergenic | 35.0% | |
AGCACCTAAAGTTATGACTA+AGG | - | chr5_1:14122602-14122621 | Msa0719120:intron | 35.0% | |
AGCACCTTAGTCATAACTTT+AGG | + | chr5_1:14122609-14122628 | None:intergenic | 35.0% | |
! | CAAGAATAGCTTCTCTCTTT+TGG | + | chr5_1:14122643-14122662 | None:intergenic | 35.0% |
CAAAAGAGAGAAGCTATTCT+TGG | - | chr5_1:14122641-14122660 | Msa0719120:intron | 35.0% | |
AAGCTATTCTTGGTACCATA+GGG | - | chr5_1:14122651-14122670 | Msa0719120:intron | 35.0% | |
ACGTGGTAATAATCAGTGTA+TGG | - | chr5_1:14122734-14122753 | Msa0719120:CDS | 35.0% | |
TGATATTGCATTCTCTCTCT+AGG | + | chr5_1:14122799-14122818 | None:intergenic | 35.0% | |
TTCAGCAATTAGTTACGTAG+AGG | + | chr5_1:14122823-14122842 | None:intergenic | 35.0% | |
!!! | TAGGATTAGCTCACACTTTT+GGG | - | chr5_1:14122924-14122943 | Msa0719120:CDS | 35.0% |
!! | TCTGATTTGGAAAGGAAAAG+AGG | + | chr5_1:14123003-14123022 | None:intergenic | 35.0% |
TTATCATACTGATACAGGTC+TGG | - | chr5_1:14123026-14123045 | Msa0719120:intron | 35.0% | |
AAAAATAGCAAAGAGCAGAG+AGG | + | chr5_1:14123085-14123104 | None:intergenic | 35.0% | |
! | GTTTAAGTTTACAAGAAGGG+AGG | - | chr5_1:14123192-14123211 | Msa0719120:intron | 35.0% |
GTCCCATGTTAGATAAGATA+TGG | + | chr5_1:14123331-14123350 | None:intergenic | 35.0% | |
TCATTGAACCACCCATTATT+CGG | + | chr5_1:14123410-14123429 | None:intergenic | 35.0% | |
CAATGAATCTTGGATAAGCT+CGG | - | chr5_1:14123424-14123443 | Msa0719120:intron | 35.0% | |
GTCCCATGTTAGATAAGATA+TGG | + | chr5_1:14123331-14123350 | None:intergenic | 35.0% | |
TCATTGAACCACCCATTATT+CGG | + | chr5_1:14123410-14123429 | None:intergenic | 35.0% | |
CAATGAATCTTGGATAAGCT+CGG | - | chr5_1:14123424-14123443 | Msa0719120:intron | 35.0% | |
GCCTACAAAAATGACTTCTA+TGG | - | chr5_1:14123679-14123698 | Msa0719120:CDS | 35.0% | |
!!! | GCCATAGAAGTCATTTTTGT+AGG | + | chr5_1:14123683-14123702 | None:intergenic | 35.0% |
AAAAATGACTTCTATGGCGA+GGG | - | chr5_1:14123685-14123704 | Msa0719120:CDS | 35.0% | |
ACGAGAAGCTTACAAATTCA+GGG | + | chr5_1:14123817-14123836 | None:intergenic | 35.0% | |
AACGAGAAGCTTACAAATTC+AGG | + | chr5_1:14123818-14123837 | None:intergenic | 35.0% | |
GTTATTTGCATTGTTGCAGA+TGG | - | chr5_1:14123835-14123854 | Msa0719120:intron | 35.0% | |
! | TACTTGTGAAAGCATGATTC+AGG | - | chr5_1:14124158-14124177 | Msa0719120:intron | 35.0% |
ACGTACATAACAAAGATCAC+GGG | + | chr5_1:14124279-14124298 | None:intergenic | 35.0% | |
!! | CGAAATGATGATGGAAGTTA+TGG | - | chr5_1:14124308-14124327 | Msa0719120:intron | 35.0% |
!! | ATGATGATGGAAGTTATGGT+AGG | - | chr5_1:14124312-14124331 | Msa0719120:intron | 35.0% |
TCTAGAGAACATGATAACTG+TGG | - | chr5_1:14124618-14124637 | Msa0719120:intron | 35.0% | |
ACTTCTCTCTTGAACTTTGA+AGG | + | chr5_1:14124707-14124726 | None:intergenic | 35.0% | |
! | AATAGTTGTTATAAGGGCGT+TGG | - | chr5_1:14124798-14124817 | Msa0719120:intron | 35.0% |
! | GAAAATAGAAGGTACAGTCA+AGG | + | chr5_1:14124867-14124886 | None:intergenic | 35.0% |
CCTCAAAAGCAGAAAATAGA+AGG | + | chr5_1:14124878-14124897 | None:intergenic | 35.0% | |
!! | CCTTCTATTTTCTGCTTTTG+AGG | - | chr5_1:14124875-14124894 | Msa0719120:intron | 35.0% |
ATTGATACAAACACTTGGAG+TGG | + | chr5_1:14124919-14124938 | None:intergenic | 35.0% | |
GTTTCCTAGTAGTATAAGGA+TGG | - | chr5_1:14125084-14125103 | Msa0719120:intron | 35.0% | |
ATTCCCATCCTTATACTACT+AGG | + | chr5_1:14125091-14125110 | None:intergenic | 35.0% | |
TGGGAATCCTATTCTTATGT+AGG | - | chr5_1:14125104-14125123 | Msa0719120:intron | 35.0% | |
GGGAATCATTTATTAGAGTG+GGG | - | chr5_1:14125168-14125187 | Msa0719120:intron | 35.0% | |
! | TCCCTACCCATATATTTTTC+GGG | - | chr5_1:14125330-14125349 | Msa0719120:intron | 35.0% |
TCCCGAAAAATATATGGGTA+GGG | + | chr5_1:14125334-14125353 | None:intergenic | 35.0% | |
TTCCCGAAAAATATATGGGT+AGG | + | chr5_1:14125335-14125354 | None:intergenic | 35.0% | |
TCTTATGCAGATTGATCTGA+AGG | - | chr5_1:14125538-14125557 | Msa0719120:intron | 35.0% | |
CTTATGCAGATTGATCTGAA+GGG | - | chr5_1:14125539-14125558 | Msa0719120:intron | 35.0% | |
CCACACTATTTAACATTTGG+CGG | + | chr5_1:14125607-14125626 | None:intergenic | 35.0% | |
CAGCCACACTATTTAACATT+TGG | + | chr5_1:14125610-14125629 | None:intergenic | 35.0% | |
CAAATGTTAAATAGTGTGGC+TGG | - | chr5_1:14125608-14125627 | Msa0719120:intron | 35.0% | |
CAATGAGTAGTTTCAAATGC+TGG | - | chr5_1:14125814-14125833 | Msa0719120:intron | 35.0% | |
GAGAACATATTAACCATGAC+AGG | + | chr5_1:14125912-14125931 | None:intergenic | 35.0% | |
ATCGAGAGAAGTAGAGTTAA+CGG | + | chr5_1:14125979-14125998 | None:intergenic | 35.0% | |
TGAATATTCAGATGACGATG+AGG | - | chr5_1:14126034-14126053 | Msa0719120:intron | 35.0% | |
CATTCCCTCATTTATAGTGT+TGG | - | chr5_1:14126096-14126115 | Msa0719120:CDS | 35.0% | |
TGCACCAACACTATAAATGA+GGG | + | chr5_1:14126103-14126122 | None:intergenic | 35.0% | |
ATGCACCAACACTATAAATG+AGG | + | chr5_1:14126104-14126123 | None:intergenic | 35.0% | |
CATTCCCTCATTTATAGTGT+TGG | - | chr5_1:14126096-14126115 | Msa0719120:CDS | 35.0% | |
GAGAGTGATGTTAGAAAAAC+AGG | - | chr5_1:14126205-14126224 | Msa0719120:intron | 35.0% | |
! | GGAGGGAGTATATTAAAACT+AGG | + | chr5_1:14126246-14126265 | None:intergenic | 35.0% |
!!! | GACATGTATTTTGAAACGGA+GGG | + | chr5_1:14126492-14126511 | None:intergenic | 35.0% |
TAACGGTCAAAATTGTGCAT+TGG | - | chr5_1:14126447-14126466 | Msa0719120:intron | 35.0% | |
CATATGTGAAGTAGTTGACT+TGG | - | chr5_1:14126470-14126489 | Msa0719120:intron | 35.0% | |
!!! | GACATGTATTTTGAAACGGA+GGG | - | chr5_1:14126492-14126511 | Msa0719120:intron | 35.0% |
!! | TTATTTCTGAACTGAAGCCT+TGG | - | chr5_1:14126614-14126633 | Msa0719120:CDS | 35.0% |
GATAAGTCAATCTCATCATC+GGG | + | chr5_1:14126648-14126667 | None:intergenic | 35.0% | |
GGTGTATTCTGATTCCTTTA+TGG | - | chr5_1:14126835-14126854 | Msa0719120:five_prime_UTR | 35.0% | |
! | ACATCTAATGGATCTTGTTG+CGG | - | chr5_1:14126884-14126903 | Msa0719120:five_prime_UTR | 35.0% |
GTCGATCGTTTATTCACATG+AGG | - | chr5_1:14118493-14118512 | Msa0719120:intron | 40.0% | |
!! | TCACATGAGGTACTTCGTTT+TGG | - | chr5_1:14118506-14118525 | Msa0719120:intron | 40.0% |
ACGATCCATATATGGTTGTG+TGG | - | chr5_1:14119062-14119081 | Msa0719120:CDS | 40.0% | |
CTTGACCACACAACCATATA+TGG | + | chr5_1:14119070-14119089 | None:intergenic | 40.0% | |
TGGTCAAGATTATCTCCTCT+CGG | - | chr5_1:14119082-14119101 | Msa0719120:CDS | 40.0% | |
TCAACATAAAACGATCCGAG+AGG | + | chr5_1:14119100-14119119 | None:intergenic | 40.0% | |
! | GCCAATTTTATGAAGGATGG+CGG | - | chr5_1:14119375-14119394 | Msa0719120:intron | 40.0% |
ATGCTGGAAACCCAAAAATC+CGG | + | chr5_1:14119433-14119452 | None:intergenic | 40.0% | |
AGTCCCATGAATACCTTCTA+TGG | - | chr5_1:14119641-14119660 | Msa0719120:intron | 40.0% | |
GTCCCATGAATACCTTCTAT+GGG | - | chr5_1:14119642-14119661 | Msa0719120:intron | 40.0% | |
GACAGATTTCAGCTTCACTT+TGG | + | chr5_1:14119862-14119881 | None:intergenic | 40.0% | |
TAGTGGTTTGAGGAGGAATA+AGG | + | chr5_1:14120003-14120022 | None:intergenic | 40.0% | |
ATAGGTATAGTGGTTTGAGG+AGG | + | chr5_1:14120010-14120029 | None:intergenic | 40.0% | |
TTGTAGCGTCCAGCTATATT+TGG | + | chr5_1:14120086-14120105 | None:intergenic | 40.0% | |
! | TCAAAATGCTGGTACTGAAC+AGG | + | chr5_1:14120216-14120235 | None:intergenic | 40.0% |
TTGCTCAGCTTGTAGAGTTT+GGG | + | chr5_1:14120243-14120262 | None:intergenic | 40.0% | |
GTCTATGAAATTGAAGCAGC+TGG | + | chr5_1:14120295-14120314 | None:intergenic | 40.0% | |
AGAAAAGAACCATCGGGTTA+TGG | - | chr5_1:14120825-14120844 | Msa0719120:intron | 40.0% | |
!! | ATTTGGGTTGTTGTAGCAGA+TGG | - | chr5_1:14120953-14120972 | Msa0719120:intron | 40.0% |
TCTTAAATGCATGCAGCATC+AGG | - | chr5_1:14121318-14121337 | Msa0719120:intron | 40.0% | |
CTTAAATGCATGCAGCATCA+GGG | - | chr5_1:14121319-14121338 | Msa0719120:intron | 40.0% | |
! | TACAAATCTGGGATGGACAA+TGG | - | chr5_1:14121382-14121401 | Msa0719120:intron | 40.0% |
! | ACAAATCTGGGATGGACAAT+GGG | - | chr5_1:14121383-14121402 | Msa0719120:intron | 40.0% |
!!! | GATATTGTTTTTGGATCCCC+AGG | - | chr5_1:14121746-14121765 | Msa0719120:intron | 40.0% |
AGGAGGACAACAATTGGAAA+TGG | - | chr5_1:14121817-14121836 | Msa0719120:intron | 40.0% | |
CCTGCAGCTCATAAAAGAAA+AGG | + | chr5_1:14121904-14121923 | None:intergenic | 40.0% | |
! | CCTTTTCTTTTATGAGCTGC+AGG | - | chr5_1:14121901-14121920 | Msa0719120:intron | 40.0% |
AATGCTTCCTTGAGAAAGCT+TGG | + | chr5_1:14121996-14122015 | None:intergenic | 40.0% | |
! | AAGCTTTCTCAAGGAAGCAT+TGG | - | chr5_1:14121995-14122014 | Msa0719120:intron | 40.0% |
! | CGTCTTTTGCAATGCCAAAA+TGG | - | chr5_1:14122018-14122037 | Msa0719120:intron | 40.0% |
! | TGCAGGAAACCATACCATTT+TGG | + | chr5_1:14122035-14122054 | None:intergenic | 40.0% |
GATATATCAACCTACTGCTG+TGG | - | chr5_1:14122066-14122085 | Msa0719120:intron | 40.0% | |
! | TTTTATGTCACCACAGCAGT+AGG | + | chr5_1:14122079-14122098 | None:intergenic | 40.0% |
! | ATTTTCCTTCTGACATCGAC+AGG | - | chr5_1:14122120-14122139 | Msa0719120:intron | 40.0% |
AGGACAGAAAATAACGCACA+AGG | + | chr5_1:14122182-14122201 | None:intergenic | 40.0% | |
AAACACAACCATCTTCTCGT+TGG | - | chr5_1:14122241-14122260 | Msa0719120:intron | 40.0% | |
! | GTTGGTTCTTTATGTAGCCA+AGG | - | chr5_1:14122259-14122278 | Msa0719120:intron | 40.0% |
! | TTTTGAGCTTGTGATGAGCA+TGG | - | chr5_1:14122338-14122357 | Msa0719120:intron | 40.0% |
GAGAACTACTTACCTAGTCT+TGG | - | chr5_1:14122566-14122585 | Msa0719120:intron | 40.0% | |
GAAGCTATTCTTGGTACCAT+AGG | - | chr5_1:14122650-14122669 | Msa0719120:intron | 40.0% | |
AGCTATTCTTGGTACCATAG+GGG | - | chr5_1:14122652-14122671 | Msa0719120:intron | 40.0% | |
TATTACCACGTCCTATCAGA+TGG | + | chr5_1:14122725-14122744 | None:intergenic | 40.0% | |
GCTGAATCTGAATTGGCAAA+AGG | - | chr5_1:14122837-14122856 | Msa0719120:intron | 40.0% | |
ATCTGAATTGGCAAAAGGAG+TGG | - | chr5_1:14122842-14122861 | Msa0719120:intron | 40.0% | |
TCTGAATTGGCAAAAGGAGT+GGG | - | chr5_1:14122843-14122862 | Msa0719120:intron | 40.0% | |
GGGGCTATATAACCTGATAA+CGG | - | chr5_1:14122883-14122902 | Msa0719120:intron | 40.0% | |
GGGCTATATAACCTGATAAC+GGG | - | chr5_1:14122884-14122903 | Msa0719120:intron | 40.0% | |
!!! | CTAGGATTAGCTCACACTTT+TGG | - | chr5_1:14122923-14122942 | Msa0719120:CDS | 40.0% |
!! | TCACACTTTTGGGAGAGATT+AGG | - | chr5_1:14122934-14122953 | Msa0719120:CDS | 40.0% |
! | TTTTTCTTGTACCTGTCCAC+CGG | - | chr5_1:14123100-14123119 | Msa0719120:CDS | 40.0% |
! | AACAAGAGTTCTAATACCGG+TGG | + | chr5_1:14123119-14123138 | None:intergenic | 40.0% |
GAGACTCTTAGAATTTGGGT+TGG | - | chr5_1:14123240-14123259 | Msa0719120:intron | 40.0% | |
!! | TTAGTTTGCAAGGTTGGGTA+TGG | + | chr5_1:14123267-14123286 | None:intergenic | 40.0% |
ATGGGTGGTTCAATGAATCT+TGG | - | chr5_1:14123414-14123433 | Msa0719120:intron | 40.0% | |
TCGGATGCCATCTTATAGTT+TGG | - | chr5_1:14123443-14123462 | Msa0719120:intron | 40.0% | |
CGGATGCCATCTTATAGTTT+GGG | - | chr5_1:14123444-14123463 | Msa0719120:intron | 40.0% | |
TGCCATCTTATAGTTTGGGT+TGG | - | chr5_1:14123448-14123467 | Msa0719120:intron | 40.0% | |
GTCCAACCCAAACTATAAGA+TGG | + | chr5_1:14123453-14123472 | None:intergenic | 40.0% | |
!! | GTGGGATCTCTCATTTTTGT+AGG | + | chr5_1:14123486-14123505 | None:intergenic | 40.0% |
ATGGGTGGTTCAATGAATCT+TGG | - | chr5_1:14123414-14123433 | Msa0719120:intron | 40.0% | |
TCGGATGCCATCTTATAGTT+TGG | - | chr5_1:14123443-14123462 | Msa0719120:intron | 40.0% | |
CGGATGCCATCTTATAGTTT+GGG | - | chr5_1:14123444-14123463 | Msa0719120:intron | 40.0% | |
TGCCATCTTATAGTTTGGGT+TGG | - | chr5_1:14123448-14123467 | Msa0719120:intron | 40.0% | |
GTCCAACCCAAACTATAAGA+TGG | + | chr5_1:14123453-14123472 | None:intergenic | 40.0% | |
CAAAAATGACTTCTATGGCG+AGG | - | chr5_1:14123684-14123703 | Msa0719120:CDS | 40.0% | |
CCACAATGAACACATGACAT+TGG | + | chr5_1:14124242-14124261 | None:intergenic | 40.0% | |
CCAATGTCATGTGTTCATTG+TGG | - | chr5_1:14124239-14124258 | Msa0719120:intron | 40.0% | |
CGTACATAACAAAGATCACG+GGG | + | chr5_1:14124278-14124297 | None:intergenic | 40.0% | |
GGGGATGATAACATGTACTA+AGG | + | chr5_1:14124538-14124557 | None:intergenic | 40.0% | |
! | CTCTCTTGAACTTTGAAGGA+TGG | + | chr5_1:14124703-14124722 | None:intergenic | 40.0% |
TCTCGATGTCGTCAATAGAA+TGG | - | chr5_1:14124743-14124762 | Msa0719120:intron | 40.0% | |
CTCGATGTCGTCAATAGAAT+GGG | - | chr5_1:14124744-14124763 | Msa0719120:intron | 40.0% | |
CTATTAGCAAAACGCAAGAG+TGG | + | chr5_1:14124783-14124802 | None:intergenic | 40.0% | |
ATACAAACACTTGGAGTGGA+AGG | + | chr5_1:14124915-14124934 | None:intergenic | 40.0% | |
AGGAAACTTATTCCCAGGAA+TGG | + | chr5_1:14125071-14125090 | None:intergenic | 40.0% | |
CTACTAGGAAACTTATTCCC+AGG | + | chr5_1:14125076-14125095 | None:intergenic | 40.0% | |
ATTTATTAGAGTGGGGTGCA+GGG | - | chr5_1:14125175-14125194 | Msa0719120:intron | 40.0% | |
! | TAGTTTTCATTCCCAAGGGA+TGG | + | chr5_1:14125225-14125244 | None:intergenic | 40.0% |
TCCCTTGGGAATGAAAACTA+TGG | - | chr5_1:14125225-14125244 | Msa0719120:intron | 40.0% | |
! | CCCATAGTTTTCATTCCCAA+GGG | + | chr5_1:14125229-14125248 | None:intergenic | 40.0% |
CCCTTGGGAATGAAAACTAT+GGG | - | chr5_1:14125226-14125245 | Msa0719120:intron | 40.0% | |
! | TCCCATAGTTTTCATTCCCA+AGG | + | chr5_1:14125230-14125249 | None:intergenic | 40.0% |
! | CTCCGGAATCTTTTATATGC+AGG | - | chr5_1:14125267-14125286 | Msa0719120:intron | 40.0% |
!! | AAGTTGGTTTGTATAGGTGG+AGG | - | chr5_1:14125458-14125477 | Msa0719120:intron | 40.0% |
!!! | TCCCATTTCGAGGTTTTAAG+GGG | + | chr5_1:14125496-14125515 | None:intergenic | 40.0% |
!! | CTCCCATTTCGAGGTTTTAA+GGG | + | chr5_1:14125497-14125516 | None:intergenic | 40.0% |
CCGCCAAATGTTAAATAGTG+TGG | - | chr5_1:14125604-14125623 | Msa0719120:intron | 40.0% | |
TACACACACACGTACATGTA+TGG | - | chr5_1:14125720-14125739 | Msa0719120:intron | 40.0% | |
! | TGGATCTTTTCTCTCTCTAC+AGG | - | chr5_1:14125834-14125853 | Msa0719120:intron | 40.0% |
TCTCTACAGGTTTACGTGAA+TGG | - | chr5_1:14125847-14125866 | Msa0719120:intron | 40.0% | |
AGCATTCCTTTCATCTGACT+GGG | + | chr5_1:14125877-14125896 | None:intergenic | 40.0% | |
TTAACCATGACAGGAATTCG+TGG | + | chr5_1:14125903-14125922 | None:intergenic | 40.0% | |
CATCACTCTCAAGACCAATT+TGG | + | chr5_1:14126195-14126214 | None:intergenic | 40.0% | |
!!! | GGACATGTATTTTGAAACGG+AGG | + | chr5_1:14126491-14126510 | None:intergenic | 40.0% |
!!! | GGACATGTATTTTGAAACGG+AGG | - | chr5_1:14126491-14126510 | Msa0719120:intron | 40.0% |
GAGCATTATCACGATCATCT+CGG | + | chr5_1:14126692-14126711 | None:intergenic | 40.0% | |
! | GAGATGATCGTGATAATGCT+CGG | - | chr5_1:14126691-14126710 | Msa0719120:five_prime_UTR | 40.0% |
! | AGATGATCGTGATAATGCTC+GGG | - | chr5_1:14126692-14126711 | Msa0719120:five_prime_UTR | 40.0% |
GATTGCTGGAAGATATCTGA+TGG | - | chr5_1:14126714-14126733 | Msa0719120:five_prime_UTR | 40.0% | |
TCCTTTATGGTGAACTGTGA+AGG | - | chr5_1:14126848-14126867 | Msa0719120:five_prime_UTR | 40.0% | |
TCCTGCAGGAAAACATCTAA+TGG | - | chr5_1:14126872-14126891 | Msa0719120:five_prime_UTR | 40.0% | |
! | TCCATTAGATGTTTTCCTGC+AGG | + | chr5_1:14126876-14126895 | None:intergenic | 40.0% |
CTCAAAAAGAATGGACCATG+TGG | - | chr5_1:14126923-14126942 | Msa0719120:five_prime_UTR | 40.0% | |
AACGAACTCCGACGAGAAAT+CGG | - | chr5_1:14118141-14118160 | Msa0719120:CDS | 45.0% | |
GTTCTTCTCCGATTTCTCGT+CGG | + | chr5_1:14118152-14118171 | None:intergenic | 45.0% | |
GAGAAGAGGAATCTCTGCTT+CGG | + | chr5_1:14118345-14118364 | None:intergenic | 45.0% | |
! | CGAAATGGAAATTTTGCCGC+CGG | + | chr5_1:14118377-14118396 | None:intergenic | 45.0% |
TACACGACTTTCGACGACAT+CGG | + | chr5_1:14118435-14118454 | None:intergenic | 45.0% | |
TCGTCGAAAGTCGTGTATGA+AGG | - | chr5_1:14118438-14118457 | Msa0719120:CDS | 45.0% | |
CGAAAGTCGTGTATGAAGGA+TGG | - | chr5_1:14118442-14118461 | Msa0719120:CDS | 45.0% | |
AGTCGTGTATGAAGGATGGA+TGG | - | chr5_1:14118446-14118465 | Msa0719120:intron | 45.0% | |
GAAGGATGGATGGTGAGATA+TGG | - | chr5_1:14118456-14118475 | Msa0719120:intron | 45.0% | |
AGATATGGCCGGCGAAAAAT+CGG | - | chr5_1:14118471-14118490 | Msa0719120:intron | 45.0% | |
!!! | GGTACTTCGTTTTGGAGTCA+CGG | - | chr5_1:14118514-14118533 | Msa0719120:intron | 45.0% |
TGATGGAAACTGTAGAGTGG+AGG | - | chr5_1:14118917-14118936 | Msa0719120:intron | 45.0% | |
AACTGTAGAGTGGAGGATAG+AGG | - | chr5_1:14118924-14118943 | Msa0719120:intron | 45.0% | |
AGAGGATTGAAGACGCATCA+TGG | - | chr5_1:14118942-14118961 | Msa0719120:intron | 45.0% | |
TGATATAAGCTGACCCCACT+CGG | - | chr5_1:14119117-14119136 | Msa0719120:CDS | 45.0% | |
! | GTATCTAGAGTAGCCCTGTT+AGG | - | chr5_1:14119211-14119230 | Msa0719120:CDS | 45.0% |
TATCTGTCATGGCAGTGTCA+TGG | - | chr5_1:14119353-14119372 | Msa0719120:intron | 45.0% | |
GCCGCCATCCTTCATAAAAT+TGG | + | chr5_1:14119379-14119398 | None:intergenic | 45.0% | |
! | GGTCAGTATGCCGGATTTTT+GGG | - | chr5_1:14119420-14119439 | Msa0719120:intron | 45.0% |
!!! | GGATTTTTGGGTTTCCAGCA+TGG | - | chr5_1:14119432-14119451 | Msa0719120:intron | 45.0% |
ATTTGAATCAGTGTTGCCGG+TGG | + | chr5_1:14119462-14119481 | None:intergenic | 45.0% | |
GTTTACCACCAATGGCATCT+AGG | - | chr5_1:14119489-14119508 | Msa0719120:CDS | 45.0% | |
! | GTTTTCCTAGATGCCATTGG+TGG | + | chr5_1:14119497-14119516 | None:intergenic | 45.0% |
! | TCACCCTATTGTGTGCCATT+AGG | - | chr5_1:14119590-14119609 | Msa0719120:CDS | 45.0% |
! | TCTCACGTTTGCTACAAGAC+AGG | + | chr5_1:14119884-14119903 | None:intergenic | 45.0% |
GGAACCTGAATGTGAAAGCT+TGG | + | chr5_1:14119929-14119948 | None:intergenic | 45.0% | |
TTGCTTGTGGACTTGAAGCT+TGG | + | chr5_1:14120054-14120073 | None:intergenic | 45.0% | |
GTGCCTACTCCAAATATAGC+TGG | - | chr5_1:14120074-14120093 | Msa0719120:intron | 45.0% | |
! | CGTCCAGCTATATTTGGAGT+AGG | + | chr5_1:14120080-14120099 | None:intergenic | 45.0% |
GTTGCTCAGCTTGTAGAGTT+TGG | + | chr5_1:14120244-14120263 | None:intergenic | 45.0% | |
ATCAACTCACCATAACCCGA+TGG | + | chr5_1:14120837-14120856 | None:intergenic | 45.0% | |
!!! | GGCTGCTTTTAACATCCAAG+AGG | - | chr5_1:14120974-14120993 | Msa0719120:intron | 45.0% |
ACATCCAAGAGGCCCTAATT+TGG | - | chr5_1:14120985-14121004 | Msa0719120:intron | 45.0% | |
GCGAGAAGACTATCTTAAGG+AGG | + | chr5_1:14121554-14121573 | None:intergenic | 45.0% | |
GCATTCCTTTGTCCATTCTC+TGG | - | chr5_1:14121572-14121591 | Msa0719120:intron | 45.0% | |
CATCTCCAGAGAATGGACAA+AGG | + | chr5_1:14121580-14121599 | None:intergenic | 45.0% | |
ACAGTGCAACAAAAGAGCGA+AGG | + | chr5_1:14121648-14121667 | None:intergenic | 45.0% | |
TTGCAAACCCACAAGCAGAA+AGG | + | chr5_1:14121855-14121874 | None:intergenic | 45.0% | |
ATCGCTCTACTATAGCTCCT+TGG | + | chr5_1:14122279-14122298 | None:intergenic | 45.0% | |
GAGCTATAGTAGAGCGATGA+AGG | - | chr5_1:14122281-14122300 | Msa0719120:intron | 45.0% | |
AGCTTGTGATGAGCATGGAT+GGG | - | chr5_1:14122343-14122362 | Msa0719120:intron | 45.0% | |
TGACTAGGTTGTCCAAGACT+AGG | + | chr5_1:14122581-14122600 | None:intergenic | 45.0% | |
!! | AGATAGTGGAACTACCCCTA+TGG | + | chr5_1:14122669-14122688 | None:intergenic | 45.0% |
! | CAAAAGCACAGCCATCTGAT+AGG | - | chr5_1:14122711-14122730 | Msa0719120:intron | 45.0% |
! | TGGGAGAGGATCTTGTTGTA+AGG | - | chr5_1:14122862-14122881 | Msa0719120:intron | 45.0% |
! | GGGAGAGGATCTTGTTGTAA+GGG | - | chr5_1:14122863-14122882 | Msa0719120:intron | 45.0% |
! | GGAGAGGATCTTGTTGTAAG+GGG | - | chr5_1:14122864-14122883 | Msa0719120:intron | 45.0% |
TTAGGCATTCTCTAACTGCC+TGG | - | chr5_1:14122952-14122971 | Msa0719120:intron | 45.0% | |
TAGGCATTCTCTAACTGCCT+GGG | - | chr5_1:14122953-14122972 | Msa0719120:intron | 45.0% | |
ATGTCAAGTCTTGGGCAAGA+GGG | + | chr5_1:14123367-14123386 | None:intergenic | 45.0% | |
AGCTCCAGATGTCAAGTCTT+GGG | + | chr5_1:14123375-14123394 | None:intergenic | 45.0% | |
AAGCTCCAGATGTCAAGTCT+TGG | + | chr5_1:14123376-14123395 | None:intergenic | 45.0% | |
ATGTCAAGTCTTGGGCAAGA+GGG | + | chr5_1:14123367-14123386 | None:intergenic | 45.0% | |
AGCTCCAGATGTCAAGTCTT+GGG | + | chr5_1:14123375-14123394 | None:intergenic | 45.0% | |
AAGCTCCAGATGTCAAGTCT+TGG | + | chr5_1:14123376-14123395 | None:intergenic | 45.0% | |
ATTGCAGTTTCCAGGAAGGT+AGG | - | chr5_1:14123859-14123878 | Msa0719120:intron | 45.0% | |
!! | TCTTTATCACCGACTTCAGC+TGG | - | chr5_1:14123914-14123933 | Msa0719120:intron | 45.0% |
TGTCATGTGTTCATTGTGGC+AGG | - | chr5_1:14124243-14124262 | Msa0719120:intron | 45.0% | |
TTCATTGTGGCAGGTTTGTG+TGG | - | chr5_1:14124252-14124271 | Msa0719120:CDS | 45.0% | |
! | TACTGGCGTCGAAATGATGA+TGG | - | chr5_1:14124299-14124318 | Msa0719120:intron | 45.0% |
ATAACTGTGGTCCACAACCA+GGG | - | chr5_1:14124631-14124650 | Msa0719120:intron | 45.0% | |
CATTTATTAGAGTGGGGTGC+AGG | - | chr5_1:14125174-14125193 | Msa0719120:intron | 45.0% | |
TTTATTAGAGTGGGGTGCAG+GGG | - | chr5_1:14125176-14125195 | Msa0719120:intron | 45.0% | |
TCCCCCTTAAAACCTCGAAA+TGG | - | chr5_1:14125491-14125510 | Msa0719120:intron | 45.0% | |
!!! | CCCATTTCGAGGTTTTAAGG+GGG | + | chr5_1:14125495-14125514 | None:intergenic | 45.0% |
CCCCCTTAAAACCTCGAAAT+GGG | - | chr5_1:14125492-14125511 | Msa0719120:intron | 45.0% | |
! | CCTCCCATTTCGAGGTTTTA+AGG | + | chr5_1:14125498-14125517 | None:intergenic | 45.0% |
CCTTAAAACCTCGAAATGGG+AGG | - | chr5_1:14125495-14125514 | Msa0719120:intron | 45.0% | |
AGATGCTGAACTTGTGTCCT+GGG | + | chr5_1:14125521-14125540 | None:intergenic | 45.0% | |
AAGATGCTGAACTTGTGTCC+TGG | + | chr5_1:14125522-14125541 | None:intergenic | 45.0% | |
TGCAGATTGATCTGAAGGGT+TGG | - | chr5_1:14125543-14125562 | Msa0719120:intron | 45.0% | |
GCAGATTGATCTGAAGGGTT+GGG | - | chr5_1:14125544-14125563 | Msa0719120:intron | 45.0% | |
CAGATTGATCTGAAGGGTTG+GGG | - | chr5_1:14125545-14125564 | Msa0719120:intron | 45.0% | |
AGACAATGCTGCTGGAAAGA+CGG | + | chr5_1:14125584-14125603 | None:intergenic | 45.0% | |
GTACGTGTGTGTGTAAAGAG+AGG | + | chr5_1:14125715-14125734 | None:intergenic | 45.0% | |
GAGCATTCCTTTCATCTGAC+TGG | + | chr5_1:14125878-14125897 | None:intergenic | 45.0% | |
TCGGCGTAAATTACCCGAAA+AGG | + | chr5_1:14126673-14126692 | None:intergenic | 45.0% | |
GCCTTCACAGTTCACCATAA+AGG | + | chr5_1:14126852-14126871 | None:intergenic | 45.0% | |
!! | TGTTGCGGTTGACTGGTTTA+AGG | - | chr5_1:14126899-14126918 | Msa0719120:five_prime_UTR | 45.0% |
! | ATCGGTGACGGCGATTAGAT+CGG | + | chr5_1:14118114-14118133 | None:intergenic | 50.0% |
GAGCTGGAAGATCATGGAAC+TGG | + | chr5_1:14118274-14118293 | None:intergenic | 50.0% | |
GTTCCATGATCTTCCAGCTC+TGG | - | chr5_1:14118274-14118293 | Msa0719120:intron | 50.0% | |
! | AATGGAAATTTTGCCGCCGG+CGG | + | chr5_1:14118374-14118393 | None:intergenic | 50.0% |
GATGGATGGTGAGATATGGC+CGG | - | chr5_1:14118460-14118479 | Msa0719120:intron | 50.0% | |
!! | ACGATCGACCGATTTTTCGC+CGG | + | chr5_1:14118482-14118501 | None:intergenic | 50.0% |
GGAGTGAGGTGATGTCAACA+TGG | - | chr5_1:14119272-14119291 | Msa0719120:intron | 50.0% | |
! | CGGTCAGTATGCCGGATTTT+TGG | - | chr5_1:14119419-14119438 | Msa0719120:intron | 50.0% |
TTGGAGTAGGCACTTGCTTG+TGG | + | chr5_1:14120067-14120086 | None:intergenic | 50.0% | |
CCTTCCAAATTAGGGCCTCT+TGG | + | chr5_1:14120992-14121011 | None:intergenic | 50.0% | |
CCAAGAGGCCCTAATTTGGA+AGG | - | chr5_1:14120989-14121008 | Msa0719120:intron | 50.0% | |
TGGGATGGACAATGGGAAGA+CGG | - | chr5_1:14121390-14121409 | Msa0719120:intron | 50.0% | |
!! | TTACTGGCTTTCACGATCCG+AGG | + | chr5_1:14121422-14121441 | None:intergenic | 50.0% |
GCAGTTGCATCTCCAGAGAA+TGG | + | chr5_1:14121587-14121606 | None:intergenic | 50.0% | |
TCCTCCTGAGCACTAAACCT+GGG | + | chr5_1:14121766-14121785 | None:intergenic | 50.0% | |
ATCCTCCTGAGCACTAAACC+TGG | + | chr5_1:14121767-14121786 | None:intergenic | 50.0% | |
GAAGTCCTGTCGATGTCAGA+AGG | + | chr5_1:14122128-14122147 | None:intergenic | 50.0% | |
TAGTAGAGCGATGAAGGCTG+TGG | - | chr5_1:14122287-14122306 | Msa0719120:intron | 50.0% | |
AGTAGAGCGATGAAGGCTGT+GGG | - | chr5_1:14122288-14122307 | Msa0719120:intron | 50.0% | |
GAGCTTGTGATGAGCATGGA+TGG | - | chr5_1:14122342-14122361 | Msa0719120:intron | 50.0% | |
TGATGAGCATGGATGGGACA+CGG | - | chr5_1:14122349-14122368 | Msa0719120:intron | 50.0% | |
ATTGGCAAAAGGAGTGGGAG+AGG | - | chr5_1:14122848-14122867 | Msa0719120:intron | 50.0% | |
CTCTAACGACTCCCGTTATC+AGG | + | chr5_1:14122898-14122917 | None:intergenic | 50.0% | |
!! | CTGATAACGGGAGTCGTTAG+AGG | - | chr5_1:14122896-14122915 | Msa0719120:intron | 50.0% |
TAACGGGAGTCGTTAGAGGT+AGG | - | chr5_1:14122900-14122919 | Msa0719120:intron | 50.0% | |
! | GAGTTCTAATACCGGTGGAC+AGG | + | chr5_1:14123114-14123133 | None:intergenic | 50.0% |
GGATACTGCATGAGCTGCAA+TGG | - | chr5_1:14123155-14123174 | Msa0719120:intron | 50.0% | |
TGTCAAGTCTTGGGCAAGAG+GGG | + | chr5_1:14123366-14123385 | None:intergenic | 50.0% | |
GATGTCAAGTCTTGGGCAAG+AGG | + | chr5_1:14123368-14123387 | None:intergenic | 50.0% | |
CTTGCCCAAGACTTGACATC+TGG | - | chr5_1:14123368-14123387 | Msa0719120:intron | 50.0% | |
TGACCCGAGTTGCCGAATAA+TGG | - | chr5_1:14123395-14123414 | Msa0719120:intron | 50.0% | |
GACCCGAGTTGCCGAATAAT+GGG | - | chr5_1:14123396-14123415 | Msa0719120:intron | 50.0% | |
CACCCATTATTCGGCAACTC+GGG | + | chr5_1:14123401-14123420 | None:intergenic | 50.0% | |
CCACCCATTATTCGGCAACT+CGG | + | chr5_1:14123402-14123421 | None:intergenic | 50.0% | |
TGTCAAGTCTTGGGCAAGAG+GGG | + | chr5_1:14123366-14123385 | None:intergenic | 50.0% | |
GATGTCAAGTCTTGGGCAAG+AGG | + | chr5_1:14123368-14123387 | None:intergenic | 50.0% | |
CTTGCCCAAGACTTGACATC+TGG | - | chr5_1:14123368-14123387 | Msa0719120:intron | 50.0% | |
TGACCCGAGTTGCCGAATAA+TGG | - | chr5_1:14123395-14123414 | Msa0719120:intron | 50.0% | |
GACCCGAGTTGCCGAATAAT+GGG | - | chr5_1:14123396-14123415 | Msa0719120:intron | 50.0% | |
CACCCATTATTCGGCAACTC+GGG | + | chr5_1:14123401-14123420 | None:intergenic | 50.0% | |
CCACCCATTATTCGGCAACT+CGG | + | chr5_1:14123402-14123421 | None:intergenic | 50.0% | |
CAGATGGGATTGCAGTTTCC+AGG | - | chr5_1:14123851-14123870 | Msa0719120:intron | 50.0% | |
TGGGATTGCAGTTTCCAGGA+AGG | - | chr5_1:14123855-14123874 | Msa0719120:intron | 50.0% | |
CCTCAACTAACCTACCTTCC+TGG | + | chr5_1:14123872-14123891 | None:intergenic | 50.0% | |
! | CCAGGAAGGTAGGTTAGTTG+AGG | - | chr5_1:14123869-14123888 | Msa0719120:intron | 50.0% |
! | GGAAGGTAGGTTAGTTGAGG+AGG | - | chr5_1:14123872-14123891 | Msa0719120:intron | 50.0% |
! | AGGTAGGTTAGTTGAGGAGG+TGG | - | chr5_1:14123875-14123894 | Msa0719120:intron | 50.0% |
! | AGGTTAGTTGAGGAGGTGGA+TGG | - | chr5_1:14123879-14123898 | Msa0719120:intron | 50.0% |
! | GGTTAGTTGAGGAGGTGGAT+GGG | - | chr5_1:14123880-14123899 | Msa0719120:intron | 50.0% |
TTCAGTTTATGCGACGGCAC+TGG | - | chr5_1:14124361-14124380 | Msa0719120:intron | 50.0% | |
GATAACTGTGGTCCACAACC+AGG | - | chr5_1:14124630-14124649 | Msa0719120:intron | 50.0% | |
!!! | GGCGTTGGCTCTTTTGACTT+TGG | - | chr5_1:14124813-14124832 | Msa0719120:intron | 50.0% |
CTTTGGTAGACTGAGCAGCT+TGG | - | chr5_1:14124830-14124849 | Msa0719120:intron | 50.0% | |
GGTTTGCCCAGTCAGATGAA+AGG | - | chr5_1:14125868-14125887 | Msa0719120:intron | 50.0% | |
TCCTCCACGAATTCCTGTCA+TGG | - | chr5_1:14125896-14125915 | Msa0719120:intron | 50.0% | |
ACCATGACAGGAATTCGTGG+AGG | + | chr5_1:14125900-14125919 | None:intergenic | 50.0% | |
ATCATCGGGCTCTTCATCCA+AGG | + | chr5_1:14126634-14126653 | None:intergenic | 50.0% | |
! | GTGATAATGCTCGGGATTGC+TGG | - | chr5_1:14126700-14126719 | Msa0719120:five_prime_UTR | 50.0% |
TGGATCTTGTTGCGGTTGAC+TGG | - | chr5_1:14126892-14126911 | Msa0719120:five_prime_UTR | 50.0% | |
GTGCCAGAGCTGGAAGATCA+TGG | + | chr5_1:14118280-14118299 | None:intergenic | 55.0% | |
! | TGATCTTCCAGCTCTGGCAC+CGG | - | chr5_1:14118280-14118299 | Msa0719120:intron | 55.0% |
TCTGCTTCGGCGAGATCGAT+TGG | + | chr5_1:14118332-14118351 | None:intergenic | 55.0% | |
TATAAGCTGACCCCACTCGG+TGG | - | chr5_1:14119120-14119139 | Msa0719120:CDS | 55.0% | |
ATAAGCTGACCCCACTCGGT+GGG | - | chr5_1:14119121-14119140 | Msa0719120:CDS | 55.0% | |
AAACCCTATCCCACCGAGTG+GGG | + | chr5_1:14119133-14119152 | None:intergenic | 55.0% | |
CAAACCCTATCCCACCGAGT+GGG | + | chr5_1:14119134-14119153 | None:intergenic | 55.0% | |
TCAAACCCTATCCCACCGAG+TGG | + | chr5_1:14119135-14119154 | None:intergenic | 55.0% | |
!! | TATGGTGGCGGTCAGTATGC+CGG | - | chr5_1:14119411-14119430 | Msa0719120:intron | 55.0% |
TTTCCAGCATGGTCTGCCAC+CGG | - | chr5_1:14119443-14119462 | Msa0719120:intron | 55.0% | |
CAGGGTGCACAACCGTCAAA+TGG | - | chr5_1:14121337-14121356 | Msa0719120:intron | 55.0% | |
TGGGAAGACGGCTTCTTCCT+CGG | - | chr5_1:14121402-14121421 | Msa0719120:intron | 55.0% | |
GATCCCCAGGTTTAGTGCTC+AGG | - | chr5_1:14121759-14121778 | Msa0719120:intron | 55.0% | |
CCTCCTGAGCACTAAACCTG+GGG | + | chr5_1:14121765-14121784 | None:intergenic | 55.0% | |
TTTATGAGCTGCAGGGCCTC+CGG | - | chr5_1:14121909-14121928 | Msa0719120:intron | 55.0% | |
GATGAAGGCTGTGGGAGTTG+TGG | - | chr5_1:14122296-14122315 | Msa0719120:intron | 55.0% | |
CACAGCCATCTGATAGGACG+TGG | - | chr5_1:14122717-14122736 | Msa0719120:intron | 55.0% | |
GGAGTCGTTAGAGGTAGGCT+AGG | - | chr5_1:14122905-14122924 | Msa0719120:intron | 55.0% | |
! | CCGAGTTGCCGAATAATGGG+TGG | - | chr5_1:14123399-14123418 | Msa0719120:intron | 55.0% |
! | CCGAGTTGCCGAATAATGGG+TGG | - | chr5_1:14123399-14123418 | Msa0719120:intron | 55.0% |
!! | ATCACCGACTTCAGCTGGAC+TGG | - | chr5_1:14123919-14123938 | Msa0719120:intron | 55.0% |
GGAACCAGTCCAGCTGAAGT+CGG | + | chr5_1:14123926-14123945 | None:intergenic | 55.0% | |
!! | CGACGGCACTGGTTTAGAAC+TGG | - | chr5_1:14124372-14124391 | Msa0719120:intron | 55.0% |
GTCCACAACCAGGGTGTGTT+CGG | - | chr5_1:14124640-14124659 | Msa0719120:intron | 55.0% | |
TCCACAACCAGGGTGTGTTC+GGG | - | chr5_1:14124641-14124660 | Msa0719120:intron | 55.0% | |
ATATGTGCCCGAACACACCC+TGG | + | chr5_1:14124651-14124670 | None:intergenic | 55.0% | |
TTTGGCGGAGACAATGCTGC+TGG | + | chr5_1:14125592-14125611 | None:intergenic | 55.0% | |
GCGATGCAAGCACATGACCT+AGG | - | chr5_1:14126569-14126588 | Msa0719120:CDS | 55.0% | |
TGAACTGTGAAGGCTCCTGC+AGG | - | chr5_1:14126858-14126877 | Msa0719120:five_prime_UTR | 55.0% | |
AACCAGGACGCTTAGCCACA+TGG | + | chr5_1:14126941-14126960 | None:intergenic | 55.0% | |
CTCACTTGTGCTGCACAACC+AGG | + | chr5_1:14126957-14126976 | None:intergenic | 55.0% | |
CTAATCGCCGTCACCGATCC+CGG | - | chr5_1:14118116-14118135 | Msa0719120:CDS | 60.0% | |
TCTCGTCGGAGTTCGTTCGC+CGG | + | chr5_1:14118138-14118157 | None:intergenic | 60.0% | |
TCCTCTTCTCCAGCTTCCGC+CGG | - | chr5_1:14118355-14118374 | Msa0719120:CDS | 60.0% | |
! | TGACCCCACTCGGTGGGATA+GGG | - | chr5_1:14119127-14119146 | Msa0719120:CDS | 60.0% |
GCCACACTCGGATATGGTGG+CGG | - | chr5_1:14119399-14119418 | Msa0719120:intron | 60.0% | |
ACCGCCACCATATCCGAGTG+TGG | + | chr5_1:14119403-14119422 | None:intergenic | 60.0% | |
CCCCAGGTTTAGTGCTCAGG+AGG | - | chr5_1:14121762-14121781 | Msa0719120:intron | 60.0% | |
GAAGGCTGTGGGAGTTGTGG+AGG | - | chr5_1:14122299-14122318 | Msa0719120:intron | 60.0% | |
TGGGGTGCAGGGGTGATCAT+AGG | - | chr5_1:14125186-14125205 | Msa0719120:intron | 60.0% | |
AACCTCGAAATGGGAGGCCC+AGG | - | chr5_1:14125501-14125520 | Msa0719120:intron | 60.0% | |
GACCATGTGGCTAAGCGTCC+TGG | - | chr5_1:14126936-14126955 | Msa0719120:five_prime_UTR | 60.0% | |
TCGTTCGCCGGGATCGGTGA+CGG | + | chr5_1:14118126-14118145 | None:intergenic | 65.0% | |
CGGAGTTCGTTCGCCGGGAT+CGG | + | chr5_1:14118132-14118151 | None:intergenic | 65.0% | |
CTCGTCGGAGTTCGTTCGCC+GGG | + | chr5_1:14118137-14118156 | None:intergenic | 65.0% | |
TCTTCTCCAGCTTCCGCCGG+CGG | - | chr5_1:14118358-14118377 | Msa0719120:CDS | 65.0% | |
! | ATTTTGCCGCCGGCGGAAGC+TGG | + | chr5_1:14118367-14118386 | None:intergenic | 65.0% |
! | CTGACCCCACTCGGTGGGAT+AGG | - | chr5_1:14119126-14119145 | Msa0719120:CDS | 65.0% |
! | AAGGATGGCGGCGCCACACT+CGG | - | chr5_1:14119387-14119406 | Msa0719120:intron | 65.0% |
GGCGCCACACTCGGATATGG+TGG | - | chr5_1:14119396-14119415 | Msa0719120:intron | 65.0% | |
TTGCCGGTGGCAGACCATGC+TGG | + | chr5_1:14119449-14119468 | None:intergenic | 65.0% | |
! | GGGCAAGAGGGGTGTGCGTT+GGG | + | chr5_1:14123355-14123374 | None:intergenic | 65.0% |
! | TGGGCAAGAGGGGTGTGCGT+TGG | + | chr5_1:14123356-14123375 | None:intergenic | 65.0% |
! | GGGCAAGAGGGGTGTGCGTT+GGG | + | chr5_1:14123355-14123374 | None:intergenic | 65.0% |
! | TGGGCAAGAGGGGTGTGCGT+TGG | + | chr5_1:14123356-14123375 | None:intergenic | 65.0% |
GCCCGAACACACCCTGGTTG+TGG | + | chr5_1:14124645-14124664 | None:intergenic | 65.0% | |
GTCCTGGGCCTCCCATTTCG+AGG | + | chr5_1:14125506-14125525 | None:intergenic | 65.0% | |
! | CTCATCGCCGGTGCCAGAGC+TGG | + | chr5_1:14118290-14118309 | None:intergenic | 70.0% |
GCCGGCGGAAGCTGGAGAAG+AGG | + | chr5_1:14118359-14118378 | None:intergenic | 70.0% | |
GGCGGCGCCACACTCGGATA+TGG | - | chr5_1:14119393-14119412 | Msa0719120:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 14118039 | 14127056 | 14118039 | ID=Msa0719120;Name=Msa0719120 |
chr5_1 | mRNA | 14118039 | 14127056 | 14118039 | ID=Msa0719120-mRNA-1;Parent=Msa0719120;Name=Msa0719120-mRNA-1;_AED=0.14;_eAED=0.14;_QI=396|0.68|0.70|0.94|0.87|0.94|17|28|638 |
chr5_1 | exon | 14118039 | 14118225 | 14118039 | ID=Msa0719120-mRNA-1:exon:5597;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14118300 | 14118464 | 14118300 | ID=Msa0719120-mRNA-1:exon:5596;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14119010 | 14119239 | 14119010 | ID=Msa0719120-mRNA-1:exon:5595;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14119466 | 14119621 | 14119466 | ID=Msa0719120-mRNA-1:exon:5594;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14120420 | 14120491 | 14120420 | ID=Msa0719120-mRNA-1:exon:5593;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14120766 | 14120830 | 14120766 | ID=Msa0719120-mRNA-1:exon:5592;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14121146 | 14121241 | 14121146 | ID=Msa0719120-mRNA-1:exon:5591;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14122719 | 14122819 | 14122719 | ID=Msa0719120-mRNA-1:exon:5590;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14122913 | 14122953 | 14122913 | ID=Msa0719120-mRNA-1:exon:5589;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14123056 | 14123172 | 14123056 | ID=Msa0719120-mRNA-1:exon:5588;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14123248 | 14123327 | 14123248 | ID=Msa0719120-mRNA-1:exon:5587;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14123658 | 14123761 | 14123658 | ID=Msa0719120-mRNA-1:exon:5586;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14124058 | 14124126 | 14124058 | ID=Msa0719120-mRNA-1:exon:5585;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14124249 | 14124302 | 14124249 | ID=Msa0719120-mRNA-1:exon:5584;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14125610 | 14125727 | 14125610 | ID=Msa0719120-mRNA-1:exon:5583;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14126053 | 14126201 | 14126053 | ID=Msa0719120-mRNA-1:exon:5582;Parent=Msa0719120-mRNA-1 |
chr5_1 | exon | 14126520 | 14127056 | 14126520 | ID=Msa0719120-mRNA-1:exon:5581;Parent=Msa0719120-mRNA-1 |
chr5_1 | five_prime_UTR | 14126661 | 14127056 | 14126661 | ID=Msa0719120-mRNA-1:five_prime_utr;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14126520 | 14126660 | 14126520 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14126053 | 14126201 | 14126053 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14125610 | 14125727 | 14125610 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14124249 | 14124302 | 14124249 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14124058 | 14124126 | 14124058 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14123658 | 14123761 | 14123658 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14123248 | 14123327 | 14123248 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14123056 | 14123172 | 14123056 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14122913 | 14122953 | 14122913 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14122719 | 14122819 | 14122719 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14121146 | 14121241 | 14121146 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14120766 | 14120830 | 14120766 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14120420 | 14120491 | 14120420 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14119466 | 14119621 | 14119466 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14119010 | 14119239 | 14119010 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14118300 | 14118464 | 14118300 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | CDS | 14118067 | 14118225 | 14118067 | ID=Msa0719120-mRNA-1:cds;Parent=Msa0719120-mRNA-1 |
chr5_1 | three_prime_UTR | 14118039 | 14118066 | 14118039 | ID=Msa0719120-mRNA-1:three_prime_utr;Parent=Msa0719120-mRNA-1 |
Gene Sequence |
Protein sequence |