Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0840610 | XP_013453646.1 | 70.642 | 109 | 28 | 1 | 1 | 105 | 1 | 109 | 1.20e-36 | 159 |
Msa0840610 | XP_013453646.1 | 91.463 | 656 | 5 | 4 | 136 | 744 | 73 | 724 | 0.0 | 1216 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0840610 | sp|F4JSE7|EDR2_ARATH | 71.341 | 656 | 131 | 8 | 136 | 743 | 72 | 718 | 0.0 | 936 |
Msa0840610 | sp|F4JSE7|EDR2_ARATH | 69.231 | 104 | 29 | 1 | 3 | 103 | 2 | 105 | 2.02e-36 | 150 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0840610 | A0A072UDZ9 | 70.642 | 109 | 28 | 1 | 1 | 105 | 1 | 109 | 5.74e-37 | 159 |
Msa0840610 | A0A072UDZ9 | 91.463 | 656 | 5 | 4 | 136 | 744 | 73 | 724 | 0.0 | 1216 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0719120 | Msa0840610 | 0.837507 | 4.989340e-57 | -8.615850e-47 |
Msa0760710 | Msa0840610 | 0.822453 | 2.349750e-53 | -8.615850e-47 |
Msa0813320 | Msa0840610 | 0.802851 | 4.610932e-49 | -8.615850e-47 |
Msa0840610 | Msa1396750 | 0.817876 | 2.626438e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0840610 | MtrunA17_Chr5g0409581 | 91.311 | 656 | 5 | 5 | 136 | 744 | 73 | 723 | 0.0 | 1209 |
Msa0840610 | MtrunA17_Chr5g0409581 | 72.222 | 108 | 27 | 1 | 1 | 105 | 1 | 108 | 2.34e-41 | 161 |
Msa0840610 | MtrunA17_Chr1g0199661 | 32.112 | 573 | 300 | 9 | 250 | 736 | 126 | 695 | 5.32e-84 | 281 |
Msa0840610 | MtrunA17_Chr2g0326781 | 31.803 | 588 | 284 | 14 | 250 | 736 | 152 | 723 | 3.22e-74 | 255 |
Msa0840610 | MtrunA17_Chr4g0065381 | 26.627 | 676 | 385 | 20 | 137 | 736 | 39 | 679 | 8.36e-59 | 211 |
Msa0840610 | MtrunA17_Chr2g0304991 | 37.179 | 234 | 98 | 4 | 552 | 736 | 31 | 264 | 2.79e-40 | 149 |
Msa0840610 | MtrunA17_Chr3g0136741 | 33.047 | 233 | 99 | 3 | 560 | 735 | 29 | 261 | 9.36e-37 | 139 |
Msa0840610 | MtrunA17_Chr4g0033671 | 30.204 | 245 | 116 | 3 | 546 | 735 | 7 | 251 | 1.22e-28 | 116 |
Msa0840610 | MtrunA17_Chr2g0305001 | 23.208 | 530 | 302 | 18 | 7 | 523 | 26 | 463 | 1.38e-22 | 102 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0840610 | AT4G19040.1 | 71.341 | 656 | 131 | 8 | 136 | 743 | 72 | 718 | 0.0 | 936 |
Msa0840610 | AT4G19040.1 | 69.231 | 104 | 29 | 1 | 3 | 103 | 2 | 105 | 2.06e-37 | 150 |
Msa0840610 | AT4G19040.2 | 71.017 | 659 | 133 | 8 | 136 | 743 | 72 | 723 | 0.0 | 935 |
Msa0840610 | AT4G19040.2 | 69.231 | 104 | 29 | 1 | 3 | 103 | 2 | 105 | 2.49e-37 | 149 |
Msa0840610 | AT4G19040.3 | 70.561 | 659 | 133 | 9 | 136 | 743 | 72 | 720 | 0.0 | 922 |
Msa0840610 | AT4G19040.3 | 69.231 | 104 | 29 | 1 | 3 | 103 | 2 | 105 | 2.43e-37 | 149 |
Msa0840610 | AT5G45560.1 | 62.832 | 791 | 171 | 16 | 3 | 743 | 2 | 719 | 0.0 | 918 |
Msa0840610 | AT5G45560.2 | 70.892 | 639 | 127 | 8 | 155 | 743 | 1 | 630 | 0.0 | 890 |
Msa0840610 | AT2G28320.1 | 31.797 | 651 | 321 | 17 | 203 | 736 | 89 | 733 | 2.87e-85 | 285 |
Msa0840610 | AT3G54800.2 | 31.393 | 567 | 296 | 13 | 258 | 736 | 169 | 730 | 1.01e-78 | 268 |
Msa0840610 | AT3G54800.1 | 31.393 | 567 | 296 | 13 | 258 | 736 | 169 | 730 | 1.01e-78 | 268 |
Msa0840610 | AT5G35180.1 | 26.736 | 677 | 388 | 17 | 137 | 736 | 129 | 774 | 1.24e-61 | 221 |
Msa0840610 | AT5G35180.2 | 26.736 | 677 | 388 | 17 | 137 | 736 | 129 | 774 | 1.45e-61 | 221 |
Msa0840610 | AT5G35180.5 | 26.725 | 681 | 387 | 18 | 137 | 736 | 129 | 778 | 3.55e-60 | 217 |
Msa0840610 | AT5G35180.4 | 25.460 | 707 | 392 | 19 | 137 | 736 | 129 | 807 | 6.76e-54 | 200 |
Msa0840610 | AT5G10750.1 | 33.333 | 240 | 103 | 3 | 553 | 735 | 32 | 271 | 1.37e-38 | 145 |
Msa0840610 | AT5G24990.1 | 32.468 | 231 | 101 | 6 | 560 | 735 | 36 | 266 | 2.04e-32 | 127 |
Msa0840610 | AT1G06050.1 | 32.906 | 234 | 101 | 3 | 568 | 745 | 30 | 263 | 1.37e-31 | 125 |
Msa0840610 | AT5G25010.1 | 30.000 | 230 | 107 | 5 | 560 | 735 | 36 | 265 | 9.50e-30 | 120 |
Msa0840610 | AT5G35180.3 | 23.819 | 487 | 312 | 14 | 137 | 595 | 129 | 584 | 1.77e-25 | 112 |
Msa0840610 | AT5G25020.1 | 30.516 | 213 | 99 | 6 | 560 | 735 | 37 | 237 | 2.70e-23 | 100 |
Find 195 sgRNAs with CRISPR-Local
Find 913 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACATATTCATATTCGATTT+TGG | 0.136904 | 5_4:+16455972 | Msa0840610:three_prime_UTR |
TACTGTTGCTAATGGAGTTT+TGG | 0.160345 | 5_4:+16454814 | Msa0840610:CDS |
TCTTTCTATGAAATATTAAA+AGG | 0.210439 | 5_4:+16455869 | Msa0840610:three_prime_UTR |
TCAATTAGCAGTGTCTTAAT+TGG | 0.225899 | 5_4:-16444195 | None:intergenic |
TGTTGCGGTTGACTGGTTTA+AGG | 0.232068 | 5_4:+16451736 | Msa0840610:CDS |
TACAATTACAATGGATTATC+AGG | 0.235313 | 5_4:+16444311 | Msa0840610:CDS |
ATCTTTGTTATGTACGTTAC+TGG | 0.239811 | 5_4:+16449380 | Msa0840610:CDS |
TGCAGGAAACCATACCATTT+TGG | 0.248440 | 5_4:-16447327 | None:intergenic |
GCCGCCATCCTTCATAAAAT+TGG | 0.261165 | 5_4:-16444674 | None:intergenic |
GATGGATCTGGATCCAGTTT+TGG | 0.264262 | 5_4:-16455726 | None:intergenic |
CTGTAGGTTGATGTTGATAT+TGG | 0.276327 | 5_4:+16454785 | Msa0840610:intron |
ACATCCAAGAGGCCCTAATT+TGG | 0.282417 | 5_4:+16446286 | Msa0840610:CDS |
CATCACTCTCAAGACCAATT+TGG | 0.285981 | 5_4:-16451290 | None:intergenic |
GGTTCTTCTACTGTTGCTAA+TGG | 0.293568 | 5_4:+16454806 | Msa0840610:CDS |
GTCCACAACCAGGGTGTGTT+CGG | 0.304031 | 5_4:+16449738 | Msa0840610:CDS |
GTGACCAAGGAGTTAGTTCC+TGG | 0.306389 | 5_4:+16454284 | Msa0840610:CDS |
TCACATGAGGTACTTCGTTT+TGG | 0.309120 | 5_4:+16443804 | Msa0840610:CDS |
CTCTTGCAACGCTTTGTTGA+TGG | 0.315978 | 5_4:+16454311 | Msa0840610:CDS |
GTGATAATGCTCGGGATTGC+TGG | 0.325042 | 5_4:+16451537 | Msa0840610:CDS |
CAGATGGGATTGCAGTTTCC+AGG | 0.337351 | 5_4:+16448949 | Msa0840610:intron |
TCCATTGTAATTGTATGATT+AGG | 0.338414 | 5_4:-16444303 | None:intergenic |
TACAACACTGGTGGTTGATA+TGG | 0.342426 | 5_4:+16454856 | Msa0840610:CDS |
GAGTTGCCCGAGAGGCTTAT+TGG | 0.343162 | 5_4:+16455660 | Msa0840610:CDS |
CAGCCACACTATTTAACATT+TGG | 0.347689 | 5_4:-16450705 | None:intergenic |
ATCGAGAGAAGTAGAGTTAA+CGG | 0.349342 | 5_4:-16451074 | None:intergenic |
AAAGAACAATAGAAAAGATT+TGG | 0.365559 | 5_4:-16455761 | None:intergenic |
GTTCAGGTTCAAGCTGGTAT+AGG | 0.366703 | 5_4:+16455935 | Msa0840610:three_prime_UTR |
CCTTCCAAATTAGGGCCTCT+TGG | 0.371002 | 5_4:-16446290 | None:intergenic |
ATTAAGACACTGCTAATTGA+TGG | 0.372917 | 5_4:+16444198 | Msa0840610:CDS |
AATAAACTCCGACGAGAAAT+CGG | 0.380093 | 5_4:+16443442 | Msa0840610:five_prime_UTR |
ATATTTCAGGCATTCCAAAT+TGG | 0.383608 | 5_4:+16451276 | Msa0840610:intron |
CCTCAACTAACCTACCTTCC+TGG | 0.388315 | 5_4:-16448967 | None:intergenic |
TCTCTACAGGTTTACGTGAA+TGG | 0.391173 | 5_4:+16450945 | Msa0840610:intron |
AAGAAAACCGCAAGATAATC+AGG | 0.391974 | 5_4:+16443852 | Msa0840610:CDS |
AAGCGTTGCAAGAGTGTTCC+AGG | 0.392075 | 5_4:-16454302 | None:intergenic |
GCAGATTGATCTGAAGGGTT+GGG | 0.394712 | 5_4:+16450642 | Msa0840610:CDS |
GATCCCCAGGTTTAGTGCTC+AGG | 0.397692 | 5_4:+16447054 | Msa0840610:intron |
TGAGCTTTAACCTGCTGTTT+CGG | 0.401153 | 5_4:-16454346 | None:intergenic |
AGCCTCTCGGGCAACTCATC+AGG | 0.405450 | 5_4:-16455654 | None:intergenic |
AACTGTAGAGTGGAGGATAG+AGG | 0.417822 | 5_4:+16444222 | Msa0840610:CDS |
GGCGGCGCCACACTCGGATA+TGG | 0.417951 | 5_4:+16444691 | Msa0840610:CDS |
TGGATCTTGTTGCGGTTGAC+TGG | 0.418651 | 5_4:+16451729 | Msa0840610:CDS |
AGAAAAGAACCATCGGGTTA+TGG | 0.420037 | 5_4:+16446126 | Msa0840610:CDS |
AAGGAAAATTGCGAATGAAA+TGG | 0.424112 | 5_4:-16443687 | None:intergenic |
CGAAATGATGATGGAAGTTA+TGG | 0.424771 | 5_4:+16449406 | Msa0840610:CDS |
CCACACTATTTAACATTTGG+CGG | 0.425322 | 5_4:-16450702 | None:intergenic |
TCCTGCAGGAAAACATCTAA+TGG | 0.427399 | 5_4:+16451709 | Msa0840610:CDS |
AGGTAGGTTAGTTGAGGAGG+TGG | 0.430771 | 5_4:+16448973 | Msa0840610:CDS |
ATTTGGTCTTGTCATAATGA+TGG | 0.430945 | 5_4:-16455744 | None:intergenic |
TCCACAACCAGGGTGTGTTC+GGG | 0.432015 | 5_4:+16449739 | Msa0840610:CDS |
AGGTTAGTTGAGGAGGTGGA+TGG | 0.443006 | 5_4:+16448977 | Msa0840610:CDS |
ATGAATACCTTTGGGACTGA+TGG | 0.443802 | 5_4:-16454371 | None:intergenic |
TCTTTATCACCGACTTCAGC+TGG | 0.444993 | 5_4:+16449012 | Msa0840610:CDS |
AGCGTCATTCAAATTTGTTA+AGG | 0.445308 | 5_4:+16447092 | Msa0840610:CDS |
AACTGCGGTAGACCCAAAAC+TGG | 0.450435 | 5_4:+16455713 | Msa0840610:CDS |
ATATATTTGTTACCATTTGA+CGG | 0.450881 | 5_4:-16446644 | None:intergenic |
CTCATCGCCGGTGCCAGAGC+TGG | 0.451480 | 5_4:-16443585 | None:intergenic |
GAGCATTCCTTTCATCTGAC+TGG | 0.451854 | 5_4:-16450973 | None:intergenic |
AGCTTCATCACATTACAGTA+TGG | 0.452828 | 5_4:+16454250 | Msa0840610:CDS |
GTTCCATGATCTTCCAGCTC+TGG | 0.453095 | 5_4:+16443572 | Msa0840610:five_prime_UTR |
GAGCTGGAAGATCATGGAAC+TGG | 0.457130 | 5_4:-16443569 | None:intergenic |
GAGCTATAGTAGAGCGATGA+AGG | 0.460950 | 5_4:+16447576 | Msa0840610:CDS |
TTGTTAAGGAGGACAACAAT+TGG | 0.467904 | 5_4:+16447106 | Msa0840610:CDS |
ACAAATCTGGGATGGACAAT+GGG | 0.469891 | 5_4:+16446678 | Msa0840610:CDS |
TCCTCTTCTCCTGCTTCCGC+CGG | 0.474334 | 5_4:+16443653 | Msa0840610:five_prime_UTR |
AGGAGGACAACAATTGGAAA+TGG | 0.476365 | 5_4:+16447112 | Msa0840610:CDS |
GTCCTGGGCCTCCCATTTCG+AGG | 0.476760 | 5_4:-16450601 | None:intergenic |
TTTATGAGCTGCAGGGCCTC+CGG | 0.481132 | 5_4:+16447204 | Msa0840610:intron |
TCGGCGTAAATTACCCGAAA+AGG | 0.483197 | 5_4:-16451507 | None:intergenic |
TCTGCTTCGGCGAGATCGAT+TGG | 0.486589 | 5_4:-16443627 | None:intergenic |
AATTGAGTATGTCATTGATC+AGG | 0.491233 | 5_4:+16446317 | Msa0840610:CDS |
AATGCTTCCTTGAGAAAGCT+TGG | 0.491262 | 5_4:-16447288 | None:intergenic |
CTCGTCGGAGTTTATTCGCC+GGG | 0.495182 | 5_4:-16443435 | None:intergenic |
TGCAGATTGATCTGAAGGGT+TGG | 0.495326 | 5_4:+16450641 | Msa0840610:CDS |
TTGCCGGTGGCAGACCATGC+TGG | 0.495357 | 5_4:-16444743 | None:intergenic |
CTAATCGCCGTCACCGATCC+CGG | 0.495640 | 5_4:+16443417 | Msa0840610:five_prime_UTR |
TCTTGTCATAATGATGGATC+TGG | 0.498898 | 5_4:-16455738 | None:intergenic |
CGGAGTTTATTCGCCGGGAT+CGG | 0.499627 | 5_4:-16443430 | None:intergenic |
TCGAAATTCGAATTCAGCAT+TGG | 0.502440 | 5_4:-16443487 | None:intergenic |
AACAGCTCCAATAAGCCTCT+CGG | 0.503028 | 5_4:-16455667 | None:intergenic |
GGTTAGTTGAGGAGGTGGAT+GGG | 0.504869 | 5_4:+16448978 | Msa0840610:CDS |
AAGATGCTGAACTTGTGTCC+TGG | 0.507164 | 5_4:-16450617 | None:intergenic |
AACCTCGAAATGGGAGGCCC+AGG | 0.508833 | 5_4:+16450599 | Msa0840610:CDS |
GAGCTTGTGATGAGCATGGA+TGG | 0.509047 | 5_4:+16447637 | Msa0840610:CDS |
TAGTAGAGCGATGAAGGCAG+TGG | 0.509494 | 5_4:+16447582 | Msa0840610:CDS |
GATAAGTCAATCTCATCATC+GGG | 0.511218 | 5_4:-16451482 | None:intergenic |
TCGTCGAAAGTCGTGTATGA+AGG | 0.511729 | 5_4:+16443736 | Msa0840610:CDS |
TGGGAAGACGGCTTCTTCCT+CGG | 0.513528 | 5_4:+16446697 | Msa0840610:CDS |
GACCATGTGGCTAAGCGTCC+TGG | 0.518533 | 5_4:+16451773 | Msa0840610:CDS |
TCTTATGCAGATTGATCTGA+AGG | 0.519053 | 5_4:+16450636 | Msa0840610:CDS |
GTGCCAGAGCTGGAAGATCA+TGG | 0.519339 | 5_4:-16443575 | None:intergenic |
AGATGCTGAACTTGTGTCCT+GGG | 0.519406 | 5_4:-16450616 | None:intergenic |
CAGGGTGCACAACCGTCAAA+TGG | 0.519973 | 5_4:+16446632 | Msa0840610:CDS |
CCAGGAAGGTAGGTTAGTTG+AGG | 0.520160 | 5_4:+16448967 | Msa0840610:CDS |
GTCATTCAAATTTGTTAAGG+AGG | 0.522240 | 5_4:+16447095 | Msa0840610:CDS |
TACAAATCTGGGATGGACAA+TGG | 0.522313 | 5_4:+16446677 | Msa0840610:CDS |
GCCCGAACACACCCTGGTTG+TGG | 0.522848 | 5_4:-16449740 | None:intergenic |
GATAACTGTGGTCCACAACC+AGG | 0.523683 | 5_4:+16449728 | Msa0840610:CDS |
ATCACCGACTTCAGCTGGAC+TGG | 0.524641 | 5_4:+16449017 | Msa0840610:CDS |
AGATAAGTCAATCTCATCAT+CGG | 0.531970 | 5_4:-16451483 | None:intergenic |
ACAGCTCCAATAAGCCTCTC+GGG | 0.532190 | 5_4:-16455666 | None:intergenic |
CTCACTTGTGCTGCACAACC+AGG | 0.532680 | 5_4:-16451791 | None:intergenic |
GAGAACATATTAACCATGAC+AGG | 0.533421 | 5_4:-16451007 | None:intergenic |
AAATTCGAATTCAGCATTGG+CGG | 0.534422 | 5_4:-16443484 | None:intergenic |
AAGCTTTCTCAAGGAAGCAT+TGG | 0.534826 | 5_4:+16447290 | Msa0840610:CDS |
TCTTCTCCTGCTTCCGCCGG+CGG | 0.536103 | 5_4:+16443656 | Msa0840610:five_prime_UTR |
TATTTAGTTCAGGTTCAAGC+TGG | 0.536525 | 5_4:+16455929 | Msa0840610:three_prime_UTR |
CAGATTGATCTGAAGGGTTG+GGG | 0.541421 | 5_4:+16450643 | Msa0840610:CDS |
AGCATTCCTTTCATCTGACT+GGG | 0.543386 | 5_4:-16450972 | None:intergenic |
TACTGGCGTCGAAATGATGA+TGG | 0.544637 | 5_4:+16449397 | Msa0840610:CDS |
TCCTAATCATACAATTACAA+TGG | 0.545446 | 5_4:+16444302 | Msa0840610:CDS |
TTCATTGTGGCAGGTTTGTG+TGG | 0.545859 | 5_4:+16449350 | Msa0840610:intron |
ATCGCTCTACTATAGCTCCT+TGG | 0.547110 | 5_4:-16447571 | None:intergenic |
AGAGGATTGAAGACGCATCA+TGG | 0.548036 | 5_4:+16444240 | Msa0840610:CDS |
ATATGGTGGCGGTAGTATGC+CGG | 0.549392 | 5_4:+16444708 | Msa0840610:CDS |
TTATTCGCCGGGATCGGTGA+CGG | 0.550439 | 5_4:-16443424 | None:intergenic |
ATCATCGGGCTCTTCATCCA+AGG | 0.552251 | 5_4:-16451468 | None:intergenic |
GAGAAGAGGAATCTCTGCTT+CGG | 0.554128 | 5_4:-16443640 | None:intergenic |
CGAAAGTCGTGTATGAAGGA+TGG | 0.554950 | 5_4:+16443740 | Msa0840610:CDS |
AGATGATCGTGATAATGCTC+GGG | 0.555372 | 5_4:+16451529 | Msa0840610:CDS |
TACACGACTTTCGACGACAT+CGG | 0.556335 | 5_4:-16443730 | None:intergenic |
ATTGCAGTTTCCAGGAAGGT+AGG | 0.557363 | 5_4:+16448957 | Msa0840610:CDS |
ATCGGTGACGGCGATTAGAT+CGG | 0.559452 | 5_4:-16443412 | None:intergenic |
GAAGGATGGATGGTGAGATA+TGG | 0.559973 | 5_4:+16443754 | Msa0840610:CDS |
TGAACTGTGAAGGCTCCTGC+AGG | 0.564586 | 5_4:+16451695 | Msa0840610:intron |
AAGGATGGCGGCGCCACACT+CGG | 0.564966 | 5_4:+16444685 | Msa0840610:CDS |
AATTCTACCTGATTATCTTG+CGG | 0.565882 | 5_4:-16443859 | None:intergenic |
CAAGAAAGAAAAGAACCATC+GGG | 0.566625 | 5_4:+16446120 | Msa0840610:CDS |
GGAAGGTAGGTTAGTTGAGG+AGG | 0.567781 | 5_4:+16448970 | Msa0840610:CDS |
ACATCTAATGGATCTTGTTG+CGG | 0.567924 | 5_4:+16451721 | Msa0840610:CDS |
TTCAAGTCAAATATCCGTCA+TGG | 0.570197 | 5_4:+16444640 | Msa0840610:CDS |
GAGATGATCGTGATAATGCT+CGG | 0.570486 | 5_4:+16451528 | Msa0840610:CDS |
TGAATACCTTTGGGACTGAT+GGG | 0.570588 | 5_4:-16454370 | None:intergenic |
TATTGGTGTGATTACAACAC+TGG | 0.572285 | 5_4:+16454844 | Msa0840610:CDS |
GCCGGCGGAAGCAGGAGAAG+AGG | 0.573207 | 5_4:-16443654 | None:intergenic |
TGGCCATGACACTGCCATGA+CGG | 0.575264 | 5_4:-16444654 | None:intergenic |
TAACAAAATTCTCAATTCCG+TGG | 0.576519 | 5_4:+16443514 | Msa0840610:five_prime_UTR |
TGATCTTCCAGCTCTGGCAC+CGG | 0.576690 | 5_4:+16443578 | Msa0840610:five_prime_UTR |
TTTGGCGGAGACAATGCTGC+TGG | 0.576911 | 5_4:-16450687 | None:intergenic |
CCCCAGGTTTAGTGCTCAGG+AGG | 0.578653 | 5_4:+16447057 | Msa0840610:intron |
TGTTCCAGGAACTAACTCCT+TGG | 0.578727 | 5_4:-16454288 | None:intergenic |
CTTAAATGCATGCAGCATCA+GGG | 0.579159 | 5_4:+16446614 | Msa0840610:intron |
AGCTTGTGATGAGCATGGAT+GGG | 0.582177 | 5_4:+16447638 | Msa0840610:CDS |
TCAATAACCAAGCTTTCTCA+AGG | 0.582360 | 5_4:+16447281 | Msa0840610:CDS |
AACGTACATAACAAAGATCA+CGG | 0.583728 | 5_4:-16449375 | None:intergenic |
CCAAGAGGCCCTAATTTGGA+AGG | 0.584955 | 5_4:+16446290 | Msa0840610:CDS |
GATTGCTGGAAGATATCTGA+TGG | 0.586915 | 5_4:+16451551 | Msa0840610:CDS |
ACAAGAAAGAAAAGAACCAT+CGG | 0.587114 | 5_4:+16446119 | Msa0840610:CDS |
TTAACCATGACAGGAATTCG+TGG | 0.587521 | 5_4:-16450998 | None:intergenic |
GAAGGCAGTGGGAGTTGTGG+AGG | 0.589759 | 5_4:+16447594 | Msa0840610:CDS |
TATCCGTCATGGCAGTGTCA+TGG | 0.591226 | 5_4:+16444651 | Msa0840610:CDS |
CCGCCAAATGTTAAATAGTG+TGG | 0.593692 | 5_4:+16450702 | Msa0840610:CDS |
GATGGATGGTGAGATATGGC+CGG | 0.595048 | 5_4:+16443758 | Msa0840610:CDS |
AACCAGGACGCTTAGCCACA+TGG | 0.595404 | 5_4:-16451775 | None:intergenic |
GTGAATTTATAACTCATCGC+CGG | 0.595717 | 5_4:-16443597 | None:intergenic |
TGGGATGGACAATGGGAAGA+CGG | 0.597017 | 5_4:+16446685 | Msa0840610:CDS |
ATGACGAATTCCGAAACAGC+AGG | 0.597021 | 5_4:+16454336 | Msa0840610:CDS |
CAAATGTTAAATAGTGTGGC+TGG | 0.601388 | 5_4:+16450706 | Msa0840610:CDS |
CCTTAAAACCTCGAAATGGG+AGG | 0.607314 | 5_4:+16450593 | Msa0840610:CDS |
AAACAATGAACCTACATCCC+AGG | 0.607663 | 5_4:-16455832 | None:intergenic |
TGGGATTGCAGTTTCCAGGA+AGG | 0.608898 | 5_4:+16448953 | Msa0840610:CDS |
TCCTCCACGAATTCCTGTCA+TGG | 0.610999 | 5_4:+16450994 | Msa0840610:CDS |
GCCACACTCGGATATGGTGG+CGG | 0.612814 | 5_4:+16444697 | Msa0840610:CDS |
TTACTGGCTTTCACGATCCG+AGG | 0.613541 | 5_4:-16446714 | None:intergenic |
AGACAATGCTGCTGGAAAGA+CGG | 0.616639 | 5_4:-16450679 | None:intergenic |
ACGTACATAACAAAGATCAC+GGG | 0.619284 | 5_4:-16449374 | None:intergenic |
GGCGCCACACTCGGATATGG+TGG | 0.621751 | 5_4:+16444694 | Msa0840610:CDS |
AGTAGAGCGATGAAGGCAGT+GGG | 0.621946 | 5_4:+16447583 | Msa0840610:CDS |
GTTGTTCTCCGATTTCTCGT+CGG | 0.622416 | 5_4:-16443450 | None:intergenic |
GATGAAGGCAGTGGGAGTTG+TGG | 0.622626 | 5_4:+16447591 | Msa0840610:CDS |
TCTCGTCGGAGTTTATTCGC+CGG | 0.625051 | 5_4:-16443436 | None:intergenic |
GTCGATCGTTTATTCACATG+AGG | 0.627039 | 5_4:+16443791 | Msa0840610:CDS |
ATCAAGAACAGATAGTGTAG+TGG | 0.627577 | 5_4:+16443541 | Msa0840610:five_prime_UTR |
GGTTTGCCCAGTCAGATGAA+AGG | 0.631041 | 5_4:+16450966 | Msa0840610:CDS |
TCTTCTGATATACTAATCAG+AGG | 0.632352 | 5_4:+16444273 | Msa0840610:CDS |
GAGCATTATCACGATCATCT+CGG | 0.632454 | 5_4:-16451526 | None:intergenic |
ATATGTGCCCGAACACACCC+TGG | 0.634812 | 5_4:-16449746 | None:intergenic |
GGAACCAGTCCAGCTGAAGT+CGG | 0.644960 | 5_4:-16449021 | None:intergenic |
TGAATATTCAGATGACGATG+AGG | 0.646331 | 5_4:+16451132 | Msa0840610:CDS |
TGATGGAAACTGTAGAGTGG+AGG | 0.646853 | 5_4:+16444215 | Msa0840610:CDS |
GCTCATCCCATCAGTCCCAA+AGG | 0.649317 | 5_4:+16454364 | Msa0840610:CDS |
CTCCTGATGAGTTGCCCGAG+AGG | 0.653972 | 5_4:+16455652 | Msa0840610:CDS |
ATCAACTCACCATAACCCGA+TGG | 0.656939 | 5_4:-16446135 | None:intergenic |
TGATGAGCATGGATGGGACA+CGG | 0.657714 | 5_4:+16447644 | Msa0840610:CDS |
TGGTGTGATTACAACACTGG+TGG | 0.660451 | 5_4:+16454847 | Msa0840610:CDS |
CTTATGCAGATTGATCTGAA+GGG | 0.662191 | 5_4:+16450637 | Msa0840610:CDS |
AGTCGTGTATGAAGGATGGA+TGG | 0.677491 | 5_4:+16443744 | Msa0840610:CDS |
TCATTTAGAGCTCAAAACTG+CGG | 0.678495 | 5_4:+16455698 | Msa0840610:CDS |
ATAACTGTGGTCCACAACCA+GGG | 0.681233 | 5_4:+16449729 | Msa0840610:CDS |
AATTGATGGAAACTGTAGAG+TGG | 0.682414 | 5_4:+16444212 | Msa0840610:CDS |
CGTACATAACAAAGATCACG+GGG | 0.690974 | 5_4:-16449373 | None:intergenic |
ATACTGTAATGTGATGAAGC+TGG | 0.702976 | 5_4:-16454248 | None:intergenic |
ACCATGACAGGAATTCGTGG+AGG | 0.722718 | 5_4:-16450995 | None:intergenic |
TCTAGAGAACATGATAACTG+TGG | 0.722765 | 5_4:+16449716 | Msa0840610:CDS |
ACCGCCACCATATCCGAGTG+TGG | 0.732538 | 5_4:-16444698 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAGTAAAAAATAAATACA+GGG | - | chr5_4:16446064-16446083 | None:intergenic | 10.0% |
!! | AATAAGTAAAAAATAAATAC+AGG | - | chr5_4:16446065-16446084 | None:intergenic | 10.0% |
!!! | TGATGATAATATTTTTTTTT+TGG | + | chr5_4:16446529-16446548 | Msa0840610:intron | 10.0% |
!! | TAAAATATTACAAGAAAATT+TGG | - | chr5_4:16449160-16449179 | None:intergenic | 10.0% |
!!! | AAAACAATTCATATTTTAAT+AGG | - | chr5_4:16449233-16449252 | None:intergenic | 10.0% |
!!! | TTATAATTTATTCAAGTTAT+TGG | + | chr5_4:16453993-16454012 | Msa0840610:intron | 10.0% |
!! | CTACAATAAAAAAAAAAAAA+AGG | - | chr5_4:16455453-16455472 | None:intergenic | 10.0% |
!!! | TGATTTTGATTATTTTCATT+CGG | + | chr5_4:16443897-16443916 | Msa0840610:intron | 15.0% |
!!! | TTTATTTTTGTGATGTTATT+AGG | + | chr5_4:16444170-16444189 | Msa0840610:intron | 15.0% |
!!! | TTTTACTACTTTATATTTAC+TGG | + | chr5_4:16445650-16445669 | Msa0840610:intron | 15.0% |
!!! | AGGAATTTTTTTTTTTTGAA+TGG | - | chr5_4:16445779-16445798 | None:intergenic | 15.0% |
!! | ATTATATTTCAACTACAAAT+AGG | - | chr5_4:16445955-16445974 | None:intergenic | 15.0% |
!! | GTTAAATCATTATATGAAAA+AGG | - | chr5_4:16446216-16446235 | None:intergenic | 15.0% |
!!! | AATTTTTTCCATAAACAAAA+AGG | - | chr5_4:16447769-16447788 | None:intergenic | 15.0% |
!!! | CAACAATAATTTGTTATATT+GGG | + | chr5_4:16449542-16449561 | Msa0840610:intron | 15.0% |
!! | TGAAAGTAAATAGAAAATAT+CGG | + | chr5_4:16450842-16450861 | Msa0840610:intron | 15.0% |
!! | AATACTATAATGATAATACA+TGG | + | chr5_4:16451363-16451382 | Msa0840610:intron | 15.0% |
!! | ATACTATAATGATAATACAT+GGG | + | chr5_4:16451364-16451383 | Msa0840610:intron | 15.0% |
!!! | AACAATGATAAATTTGATTT+GGG | - | chr5_4:16451650-16451669 | None:intergenic | 15.0% |
!! | AAACAATGATAAATTTGATT+TGG | - | chr5_4:16451651-16451670 | None:intergenic | 15.0% |
!! | AATCAAATTTATCATTGTTT+CGG | + | chr5_4:16451651-16451670 | Msa0840610:intron | 15.0% |
!! | TATTCAACAACAATAAAATT+TGG | - | chr5_4:16453648-16453667 | None:intergenic | 15.0% |
!! | TCCTATTTAAGAAAAAAAAA+CGG | - | chr5_4:16453913-16453932 | None:intergenic | 15.0% |
!!! | TTTTTTTTTCTTAAATAGGA+GGG | + | chr5_4:16453913-16453932 | Msa0840610:intron | 15.0% |
!!! | TTTATATTTTATTTTCGTTG+AGG | + | chr5_4:16454054-16454073 | Msa0840610:intron | 15.0% |
!! | AATATTAAATGAATACCTTT+GGG | - | chr5_4:16454382-16454401 | None:intergenic | 15.0% |
!!! | NNNNNNNNNTCCTTGTTTAT+TGG | + | chr5_4:16454595-16454614 | Msa0840610:intron | 15.0% |
!!! | NNNNNNNNTCCTTGTTTATT+GGG | + | chr5_4:16454596-16454615 | Msa0840610:intron | 15.0% |
!!! | AATTTTACTTCTAAATACTT+AGG | - | chr5_4:16454653-16454672 | None:intergenic | 15.0% |
!!! | AAATACTTAATTTTAACTTG+TGG | + | chr5_4:16455242-16455261 | Msa0840610:intron | 15.0% |
!!! | AAAATTTGTAATTTGTTATG+AGG | + | chr5_4:16455508-16455527 | Msa0840610:intron | 15.0% |
!! | TCTTTCTATGAAATATTAAA+AGG | + | chr5_4:16455869-16455888 | Msa0840610:three_prime_UTR | 15.0% |
!!! | ATTTTGTAATTATTTAGTTC+AGG | + | chr5_4:16455919-16455938 | Msa0840610:three_prime_UTR | 15.0% |
!!! | TATTTTGATATGAAAAGTGA+AGG | + | chr5_4:16444023-16444042 | Msa0840610:intron | 20.0% |
!!! | ATTTTGATATGAAAAGTGAA+GGG | + | chr5_4:16444024-16444043 | Msa0840610:intron | 20.0% |
!! | ACAAGAAAATATTGTAAAGT+AGG | + | chr5_4:16445016-16445035 | Msa0840610:intron | 20.0% |
!!! | ATTTTGTTTGAACTTTGAAT+AGG | - | chr5_4:16445325-16445344 | None:intergenic | 20.0% |
!!! | TATGTGTTTCTTTAATTTCA+AGG | - | chr5_4:16445424-16445443 | None:intergenic | 20.0% |
!! | TGAAATTAAAGAAACACATA+CGG | + | chr5_4:16445424-16445443 | Msa0840610:intron | 20.0% |
!!! | ATAATTTTATACATGCTATC+TGG | + | chr5_4:16445615-16445634 | Msa0840610:intron | 20.0% |
!!! | CATGATTTTAACAGTAAAAT+AGG | - | chr5_4:16445799-16445818 | None:intergenic | 20.0% |
!! | AAAAAATGCAGGAAAAATTA+TGG | - | chr5_4:16446029-16446048 | None:intergenic | 20.0% |
!!! | TTTACTTATTTTTGTGTAGA+TGG | + | chr5_4:16446075-16446094 | Msa0840610:intron | 20.0% |
!! | TATCTAATGTACATTTATAC+TGG | + | chr5_4:16446161-16446180 | Msa0840610:intron | 20.0% |
!!! | TTGCTGACATTTTATAATTT+GGG | + | chr5_4:16446238-16446257 | Msa0840610:intron | 20.0% |
!!! | AATTTTTTCCTTCCAAATTA+GGG | - | chr5_4:16446301-16446320 | None:intergenic | 20.0% |
!!! | TATCTGTGTTCTTAAATTTT+TGG | + | chr5_4:16446389-16446408 | Msa0840610:intron | 20.0% |
!!! | AAAGAGACAATTTTTTTACA+TGG | + | chr5_4:16446452-16446471 | Msa0840610:intron | 20.0% |
!!! | ATATATTTGTTACCATTTGA+CGG | - | chr5_4:16446647-16446666 | None:intergenic | 20.0% |
!!! | ATTTCTTTTGAATACAAATC+TGG | + | chr5_4:16446665-16446684 | Msa0840610:CDS | 20.0% |
!!! | TTTCTTTTGAATACAAATCT+GGG | + | chr5_4:16446666-16446685 | Msa0840610:CDS | 20.0% |
!!! | ATAACATACGATATTGTTTT+TGG | + | chr5_4:16447032-16447051 | Msa0840610:intron | 20.0% |
!!! | CTACATTTCTTAGAATATTT+TGG | + | chr5_4:16447513-16447532 | Msa0840610:intron | 20.0% |
!!! | TTCTTATTCCTTTTTGTTTA+TGG | + | chr5_4:16447758-16447777 | Msa0840610:intron | 20.0% |
!! | TTACTTTATTGATAAGATAG+TGG | - | chr5_4:16447978-16447997 | None:intergenic | 20.0% |
!! | AGCTTAAAAATGTGTTTATA+AGG | - | chr5_4:16448812-16448831 | None:intergenic | 20.0% |
!!! | AAGCTATATCTTTTTCAATT+TGG | + | chr5_4:16448827-16448846 | Msa0840610:intron | 20.0% |
!!! | AGCTATATCTTTTTCAATTT+GGG | + | chr5_4:16448828-16448847 | Msa0840610:intron | 20.0% |
!! | TGTTAGATTATCTTTACATT+GGG | - | chr5_4:16449045-16449064 | None:intergenic | 20.0% |
!! | ATGTTAGATTATCTTTACAT+TGG | - | chr5_4:16449046-16449065 | None:intergenic | 20.0% |
!! | CTACAAATTATTATCAATGA+TGG | - | chr5_4:16449071-16449090 | None:intergenic | 20.0% |
!! | TGTTTAAACTATCTGAAAAA+TGG | + | chr5_4:16449281-16449300 | Msa0840610:intron | 20.0% |
!! | GTTTAAACTATCTGAAAAAT+GGG | + | chr5_4:16449282-16449301 | Msa0840610:intron | 20.0% |
!! | CAATATAATTAATTACTCTC+TGG | - | chr5_4:16449315-16449334 | None:intergenic | 20.0% |
!!! | GCAACAATAATTTGTTATAT+TGG | + | chr5_4:16449541-16449560 | Msa0840610:intron | 20.0% |
!!! | TGTTTTTAACTACTTCAAAA+AGG | - | chr5_4:16449590-16449609 | None:intergenic | 20.0% |
!! | AGTTAAAAACATTTAGTAGA+AGG | + | chr5_4:16449599-16449618 | Msa0840610:intron | 20.0% |
!!! | TTTTGCTAATAGTTGTTATA+AGG | + | chr5_4:16449889-16449908 | Msa0840610:intron | 20.0% |
!! | TTTGCTAATAGTTGTTATAA+GGG | + | chr5_4:16449890-16449909 | Msa0840610:intron | 20.0% |
!! | GTTTGTATCAATTACTAAAA+AGG | + | chr5_4:16450025-16450044 | Msa0840610:intron | 20.0% |
!!! | TTTTAGGATTTAAGATTTGA+TGG | - | chr5_4:16450074-16450093 | None:intergenic | 20.0% |
!! | AAATTGTCAATGAAATTTCA+TGG | + | chr5_4:16450527-16450546 | Msa0840610:intron | 20.0% |
!! | AATTGTCAATGAAATTTCAT+GGG | + | chr5_4:16450528-16450547 | Msa0840610:intron | 20.0% |
!!! | AAATAGAAATTCTGTTTTGA+TGG | + | chr5_4:16451108-16451127 | Msa0840610:CDS | 20.0% |
!! | GTGTGAATATTTAATATTTC+AGG | + | chr5_4:16451263-16451282 | Msa0840610:intron | 20.0% |
!!! | AGTCTATATTTTGATTTATG+TGG | - | chr5_4:16453068-16453087 | None:intergenic | 20.0% |
!! | TCTAATACCATGTTAAAATT+TGG | - | chr5_4:16453252-16453271 | None:intergenic | 20.0% |
!! | TTAATAAAGGTCATAGAATT+TGG | - | chr5_4:16453496-16453515 | None:intergenic | 20.0% |
!! | TAATAATTTCCAAAAAAGTG+AGG | - | chr5_4:16453544-16453563 | None:intergenic | 20.0% |
!!! | ACCGTTTTTTTTTCTTAAAT+AGG | + | chr5_4:16453909-16453928 | Msa0840610:intron | 20.0% |
!!! | GTTTTTTTTTCTTAAATAGG+AGG | + | chr5_4:16453912-16453931 | Msa0840610:intron | 20.0% |
!! | AAATTAAATTCACCACATTA+AGG | - | chr5_4:16453961-16453980 | None:intergenic | 20.0% |
!! | CAATATTAAATGAATACCTT+TGG | - | chr5_4:16454383-16454402 | None:intergenic | 20.0% |
!! | AAATTATATAATTAACTCGC+TGG | - | chr5_4:16454437-16454456 | None:intergenic | 20.0% |
!! | CGAGTTAATTATATAATTTG+TGG | + | chr5_4:16454438-16454457 | Msa0840610:intron | 20.0% |
!!! | GTTTTAAAAGTATAATGACT+TGG | + | chr5_4:16455023-16455042 | Msa0840610:intron | 20.0% |
!! | AAAACAATTTGGGAAAATTA+GGG | - | chr5_4:16455194-16455213 | None:intergenic | 20.0% |
!! | AAAGAACAATAGAAAAGATT+TGG | - | chr5_4:16455764-16455783 | None:intergenic | 20.0% |
!!! | AACATATTCATATTCGATTT+TGG | + | chr5_4:16455972-16455991 | Msa0840610:three_prime_UTR | 20.0% |
! | ACAAAAATTTCAAACTTCGA+AGG | - | chr5_4:16443709-16443728 | None:intergenic | 25.0% |
! | TAATCAAAATCACGAAGTAA+CGG | - | chr5_4:16443889-16443908 | None:intergenic | 25.0% |
!! | TTGATTATTTTCATTCGGTT+TGG | + | chr5_4:16443902-16443921 | Msa0840610:intron | 25.0% |
!! | TGATTATTTTCATTCGGTTT+GGG | + | chr5_4:16443903-16443922 | Msa0840610:intron | 25.0% |
! | ACGAAAATCTAACTGAATTT+AGG | - | chr5_4:16443932-16443951 | None:intergenic | 25.0% |
! | TCCTAATCATACAATTACAA+TGG | + | chr5_4:16444302-16444321 | Msa0840610:CDS | 25.0% |
! | TCCATTGTAATTGTATGATT+AGG | - | chr5_4:16444306-16444325 | None:intergenic | 25.0% |
!!! | TACAATTACAATGGATTATC+AGG | + | chr5_4:16444311-16444330 | Msa0840610:CDS | 25.0% |
! | GAAATTGAAAATGCACTAAA+TGG | + | chr5_4:16444531-16444550 | Msa0840610:intron | 25.0% |
! | AATGGAATCTAGTAAATTGA+TGG | + | chr5_4:16444549-16444568 | Msa0840610:intron | 25.0% |
! | TAACTAAACTGTAAACCTAA+TGG | - | chr5_4:16444905-16444924 | None:intergenic | 25.0% |
! | TTAGGTTTACAGTTTAGTTA+TGG | + | chr5_4:16444905-16444924 | Msa0840610:intron | 25.0% |
! | TGCATAGATTAAGAAAAGAA+AGG | + | chr5_4:16444985-16445004 | Msa0840610:intron | 25.0% |
! | AGAAAATATTGTAAAGTAGG+AGG | + | chr5_4:16445019-16445038 | Msa0840610:intron | 25.0% |
! | TACCACACAAAAAAAGATTA+GGG | - | chr5_4:16445132-16445151 | None:intergenic | 25.0% |
! | TTACCACACAAAAAAAGATT+AGG | - | chr5_4:16445133-16445152 | None:intergenic | 25.0% |
! | TAATTAAACAATTTGACCAC+AGG | + | chr5_4:16445892-16445911 | Msa0840610:intron | 25.0% |
! | TATTTAAAAGTGGCATATAC+TGG | + | chr5_4:16445918-16445937 | Msa0840610:intron | 25.0% |
! | ATTTAAAAGTGGCATATACT+GGG | + | chr5_4:16445919-16445938 | Msa0840610:intron | 25.0% |
! | CAGTATAGTAAATCTCTAAA+TGG | - | chr5_4:16445988-16446007 | None:intergenic | 25.0% |
! | TGCATATCTAAAAAAAATGC+AGG | - | chr5_4:16446040-16446059 | None:intergenic | 25.0% |
!! | GTTGCTGACATTTTATAATT+TGG | + | chr5_4:16446237-16446256 | Msa0840610:intron | 25.0% |
!!! | CAATTTTTTCCTTCCAAATT+AGG | - | chr5_4:16446302-16446321 | None:intergenic | 25.0% |
! | GCACATTTAATGAATACAAT+AGG | - | chr5_4:16446364-16446383 | None:intergenic | 25.0% |
! | AACAACATTACAGAAAAAGT+GGG | - | chr5_4:16446801-16446820 | None:intergenic | 25.0% |
! | AAACAACATTACAGAAAAAG+TGG | - | chr5_4:16446802-16446821 | None:intergenic | 25.0% |
! | GTATGTTATGAATATATACG+AGG | - | chr5_4:16447021-16447040 | None:intergenic | 25.0% |
!!! | TTTTCTGTCCTTTATTTTTC+TGG | + | chr5_4:16447486-16447505 | Msa0840610:intron | 25.0% |
! | TGGAAAAAATTGTTATGACA+TGG | + | chr5_4:16447778-16447797 | Msa0840610:intron | 25.0% |
! | GGAAAAAATTGTTATGACAT+GGG | + | chr5_4:16447779-16447798 | Msa0840610:intron | 25.0% |
! | GAAAAAATTGTTATGACATG+GGG | + | chr5_4:16447780-16447799 | Msa0840610:intron | 25.0% |
! | AAAAAATTGTTATGACATGG+GGG | + | chr5_4:16447781-16447800 | Msa0840610:intron | 25.0% |
! | TCTCTAAACATAGAATTAGA+TGG | - | chr5_4:16447845-16447864 | None:intergenic | 25.0% |
! | AGTATGATAACATTCTGATT+TGG | - | chr5_4:16448310-16448329 | None:intergenic | 25.0% |
!! | TTAAACAAGAGTTCTAATAC+CGG | - | chr5_4:16448417-16448436 | None:intergenic | 25.0% |
!! | GTATTAGAACTCTTGTTTAA+GGG | + | chr5_4:16448417-16448436 | Msa0840610:intron | 25.0% |
!! | AGAGTTTAAGTTTACAAGAA+GGG | + | chr5_4:16448484-16448503 | Msa0840610:intron | 25.0% |
!!! | ATCTTACAAATTAGTTTGCA+AGG | - | chr5_4:16448572-16448591 | None:intergenic | 25.0% |
! | CTGAAAATGTGTTTATTAGT+GGG | - | chr5_4:16448602-16448621 | None:intergenic | 25.0% |
! | TCTGAAAATGTGTTTATTAG+TGG | - | chr5_4:16448603-16448622 | None:intergenic | 25.0% |
! | AAGATAAAGTGAATCTTGTA+TGG | + | chr5_4:16448859-16448878 | Msa0840610:intron | 25.0% |
!! | GATCATTCTTTTTGCATAAA+TGG | + | chr5_4:16449110-16449129 | Msa0840610:intron | 25.0% |
!!! | AAGAAAATTTGGTTCTATTG+CGG | - | chr5_4:16449149-16449168 | None:intergenic | 25.0% |
! | CGACAAAAATAATAATACAG+GGG | - | chr5_4:16449655-16449674 | None:intergenic | 25.0% |
! | CCGACAAAAATAATAATACA+GGG | - | chr5_4:16449656-16449675 | None:intergenic | 25.0% |
!!! | CCCTGTATTATTATTTTTGT+CGG | + | chr5_4:16449653-16449672 | Msa0840610:intron | 25.0% |
! | ACCGACAAAAATAATAATAC+AGG | - | chr5_4:16449657-16449676 | None:intergenic | 25.0% |
!! | AGAGAAGTCTATATTTTCTA+GGG | + | chr5_4:16449817-16449836 | Msa0840610:intron | 25.0% |
! | TAGTAATTGATACAAACACT+TGG | - | chr5_4:16450022-16450041 | None:intergenic | 25.0% |
! | TGTATCAATTACTAAAAAGG+TGG | + | chr5_4:16450028-16450047 | Msa0840610:intron | 25.0% |
! | TCTTAAATCCTAAAACCAAT+TGG | + | chr5_4:16450079-16450098 | Msa0840610:intron | 25.0% |
!!! | AACAAAAACCAATTGGTTTT+AGG | - | chr5_4:16450090-16450109 | None:intergenic | 25.0% |
!!! | AAAACCAATTGGTTTTTGTT+TGG | + | chr5_4:16450090-16450109 | Msa0840610:intron | 25.0% |
! | GCAACTGTCATTAAAATATT+CGG | + | chr5_4:16450119-16450138 | Msa0840610:intron | 25.0% |
! | ATAAGTTTCCTAGTAGTATA+AGG | + | chr5_4:16450178-16450197 | Msa0840610:intron | 25.0% |
! | TTCAAAACCTACATAAGAAT+AGG | - | chr5_4:16450212-16450231 | None:intergenic | 25.0% |
! | AGTGTTTGACTAACATTTAT+AGG | + | chr5_4:16450234-16450253 | Msa0840610:intron | 25.0% |
! | CTTTAATAAATGATTCCCAA+GGG | - | chr5_4:16450264-16450283 | None:intergenic | 25.0% |
! | ACTTTAATAAATGATTCCCA+AGG | - | chr5_4:16450265-16450284 | None:intergenic | 25.0% |
! | TTGGGAATCATTTATTAAAG+TGG | + | chr5_4:16450264-16450283 | Msa0840610:intron | 25.0% |
! | TGGGAATCATTTATTAAAGT+GGG | + | chr5_4:16450265-16450284 | Msa0840610:intron | 25.0% |
!! | GTATTGCAATATTTGTTACA+AGG | - | chr5_4:16450404-16450423 | None:intergenic | 25.0% |
!! | AATTTTCATCTATGAAGGTA+AGG | - | chr5_4:16450512-16450531 | None:intergenic | 25.0% |
!! | TTGACAATTTTCATCTATGA+AGG | - | chr5_4:16450517-16450536 | None:intergenic | 25.0% |
!! | TGTGATATAGAGTTTTCTTA+TGG | + | chr5_4:16450747-16450766 | Msa0840610:intron | 25.0% |
! | GAAAAACTGATGATATAGAA+GGG | - | chr5_4:16450787-16450806 | None:intergenic | 25.0% |
! | TGAAAAACTGATGATATAGA+AGG | - | chr5_4:16450788-16450807 | None:intergenic | 25.0% |
! | GTAAATAGAAAATATCGGAA+TGG | + | chr5_4:16450847-16450866 | Msa0840610:intron | 25.0% |
! | CCCACAAATCATATAAAATT+GGG | - | chr5_4:16450879-16450898 | None:intergenic | 25.0% |
!!! | CCCAATTTTATATGATTTGT+GGG | + | chr5_4:16450876-16450895 | Msa0840610:intron | 25.0% |
! | TCCCACAAATCATATAAAAT+TGG | - | chr5_4:16450880-16450899 | None:intergenic | 25.0% |
!!! | AATTTTATATGATTTGTGGG+AGG | + | chr5_4:16450879-16450898 | Msa0840610:intron | 25.0% |
!!! | ATTTTATATGATTTGTGGGA+GGG | + | chr5_4:16450880-16450899 | Msa0840610:intron | 25.0% |
!!! | TGATAAATTTGATTTGGGAA+AGG | - | chr5_4:16451645-16451664 | None:intergenic | 25.0% |
! | ACCATGTTAAAATTTGGATT+AGG | - | chr5_4:16453246-16453265 | None:intergenic | 25.0% |
!! | ACATGGTATTAGATCTATTT+TGG | + | chr5_4:16453259-16453278 | Msa0840610:intron | 25.0% |
!! | TCATATCGTGCTTTTAATAA+AGG | - | chr5_4:16453509-16453528 | None:intergenic | 25.0% |
! | AAAATGCAAAGGAAAAAGAA+TGG | - | chr5_4:16453573-16453592 | None:intergenic | 25.0% |
! | GAAGAAAAAACAAAATGCAA+AGG | - | chr5_4:16453584-16453603 | None:intergenic | 25.0% |
!! | CAACAATAAAATTTGGTTCA+TGG | - | chr5_4:16453641-16453660 | None:intergenic | 25.0% |
! | TAATATTGTCATCACTAGAT+TGG | + | chr5_4:16454395-16454414 | Msa0840610:intron | 25.0% |
! | AATATTGTCATCACTAGATT+GGG | + | chr5_4:16454396-16454415 | Msa0840610:intron | 25.0% |
! | AGATCATAACAAACAAGTTA+GGG | - | chr5_4:16454748-16454767 | None:intergenic | 25.0% |
! | TAGATCATAACAAACAAGTT+AGG | - | chr5_4:16454749-16454768 | None:intergenic | 25.0% |
!! | ATCAAATAACTTTTGTCTGT+AGG | + | chr5_4:16454769-16454788 | Msa0840610:intron | 25.0% |
!!! | TTGTACAGGTATGTTTTTTA+TGG | + | chr5_4:16454885-16454904 | Msa0840610:intron | 25.0% |
!! | TTTTATGGTGTAGATATCAT+AGG | + | chr5_4:16454900-16454919 | Msa0840610:intron | 25.0% |
! | AAACAATTTGGGAAAATTAG+GGG | - | chr5_4:16455193-16455212 | None:intergenic | 25.0% |
! | CAAAACAATTTGGGAAAATT+AGG | - | chr5_4:16455195-16455214 | None:intergenic | 25.0% |
!!! | TACTTAATTTTAACTTGTGG+AGG | + | chr5_4:16455245-16455264 | Msa0840610:intron | 25.0% |
! | ACAAGATTGTTACAATTAAC+AGG | + | chr5_4:16455623-16455642 | Msa0840610:intron | 25.0% |
! | CAAGATTGTTACAATTAACA+GGG | + | chr5_4:16455624-16455643 | Msa0840610:intron | 25.0% |
!! | TTGTATAATTTTTCATCTCC+TGG | + | chr5_4:16455814-16455833 | Msa0840610:three_prime_UTR | 25.0% |
!! | TGTATAATTTTTCATCTCCT+GGG | + | chr5_4:16455815-16455834 | Msa0840610:three_prime_UTR | 25.0% |
!! | TAGGTTCATTGTTTTCATAT+TGG | + | chr5_4:16455841-16455860 | Msa0840610:three_prime_UTR | 25.0% |
TAACAAAATTCTCAATTCCG+TGG | + | chr5_4:16443514-16443533 | Msa0840610:five_prime_UTR | 30.0% | |
! | ATCTGTTCTTGATTTTTCCA+CGG | - | chr5_4:16443534-16443553 | None:intergenic | 30.0% |
AAGGAAAATTGCGAATGAAA+TGG | - | chr5_4:16443690-16443709 | None:intergenic | 30.0% | |
AATTCTACCTGATTATCTTG+CGG | - | chr5_4:16443862-16443881 | None:intergenic | 30.0% | |
!!! | GTTTTTTGATGCAAATTCGA+TGG | + | chr5_4:16443950-16443969 | Msa0840610:intron | 30.0% |
TATGAAAAGTGAAGGGAATT+TGG | + | chr5_4:16444031-16444050 | Msa0840610:intron | 30.0% | |
ATGAAAAGTGAAGGGAATTT+GGG | + | chr5_4:16444032-16444051 | Msa0840610:intron | 30.0% | |
TCAATTAGCAGTGTCTTAAT+TGG | - | chr5_4:16444198-16444217 | None:intergenic | 30.0% | |
ATTAAGACACTGCTAATTGA+TGG | + | chr5_4:16444198-16444217 | Msa0840610:CDS | 30.0% | |
TCTTCTGATATACTAATCAG+AGG | + | chr5_4:16444273-16444292 | Msa0840610:CDS | 30.0% | |
! | GCATTTTCAATTTCCTAACA+GGG | - | chr5_4:16444525-16444544 | None:intergenic | 30.0% |
! | TGCATTTTCAATTTCCTAAC+AGG | - | chr5_4:16444526-16444545 | None:intergenic | 30.0% |
ATAATTTGAATCAGTGTTGC+CGG | - | chr5_4:16444762-16444781 | None:intergenic | 30.0% | |
! | AATGTTTTACTAGATGCCAT+TGG | - | chr5_4:16444797-16444816 | None:intergenic | 30.0% |
AGCATTACTTTACTACATTG+AGG | - | chr5_4:16444837-16444856 | None:intergenic | 30.0% | |
! | TTCATTTGATGTCTTGTTGA+AGG | - | chr5_4:16445053-16445072 | None:intergenic | 30.0% |
ACCACACAAAAAAAGATTAG+GGG | - | chr5_4:16445131-16445150 | None:intergenic | 30.0% | |
! | TGTGAAAGCTTAGATTTTGA+AGG | - | chr5_4:16445216-16445235 | None:intergenic | 30.0% |
AAATCTAAGCTTTCACATTC+AGG | + | chr5_4:16445219-16445238 | Msa0840610:intron | 30.0% | |
ATGCATTCATTTGACATCTT+TGG | - | chr5_4:16445247-16445266 | None:intergenic | 30.0% | |
TGAACTTTGAATAGGTATAG+TGG | - | chr5_4:16445317-16445336 | None:intergenic | 30.0% | |
AACTACTTTACACAATGACT+AGG | - | chr5_4:16445689-16445708 | None:intergenic | 30.0% | |
AACGCTCAAGAGAATAAAAA+AGG | - | chr5_4:16445742-16445761 | None:intergenic | 30.0% | |
!! | ATCATGAATGCTTTTAGAAG+AGG | + | chr5_4:16445813-16445832 | Msa0840610:intron | 30.0% |
!! | TCATGAATGCTTTTAGAAGA+GGG | + | chr5_4:16445814-16445833 | Msa0840610:intron | 30.0% |
!! | CCACTTTTAAATAAAACCTG+TGG | - | chr5_4:16445911-16445930 | None:intergenic | 30.0% |
!!! | CCACAGGTTTTATTTAAAAG+TGG | + | chr5_4:16445908-16445927 | Msa0840610:intron | 30.0% |
ACAAGAAAGAAAAGAACCAT+CGG | + | chr5_4:16446119-16446138 | Msa0840610:CDS | 30.0% | |
AATTGAGTATGTCATTGATC+AGG | + | chr5_4:16446317-16446336 | Msa0840610:CDS | 30.0% | |
TTTATCTCTCTGATGTAGAT+TGG | + | chr5_4:16446418-16446437 | Msa0840610:intron | 30.0% | |
!! | GTGATCTTAGTTTTTGTAGT+AGG | + | chr5_4:16446483-16446502 | Msa0840610:intron | 30.0% |
! | TTTTGAATACAAATCTGGGA+TGG | + | chr5_4:16446670-16446689 | Msa0840610:CDS | 30.0% |
CAGTCTTCTACAAAATTAAG+TGG | - | chr5_4:16446763-16446782 | None:intergenic | 30.0% | |
!! | AATGTTGTTTCCTATGTGAT+TGG | + | chr5_4:16446812-16446831 | Msa0840610:intron | 30.0% |
! | AGTTCTACTGTATTTAGTTC+TGG | + | chr5_4:16446969-16446988 | Msa0840610:intron | 30.0% |
GAGGATATGCATGATAAAAA+TGG | - | chr5_4:16446999-16447018 | None:intergenic | 30.0% | |
TGTTATGAATATATACGAGG+AGG | - | chr5_4:16447018-16447037 | None:intergenic | 30.0% | |
!! | AGCGTCATTCAAATTTGTTA+AGG | + | chr5_4:16447092-16447111 | Msa0840610:CDS | 30.0% |
!! | GTCATTCAAATTTGTTAAGG+AGG | + | chr5_4:16447095-16447114 | Msa0840610:CDS | 30.0% |
! | GTCCAATCAAAAATTGATTC+CGG | - | chr5_4:16447226-16447245 | None:intergenic | 30.0% |
TATATCTTATCAGTGAATGC+AGG | - | chr5_4:16447347-16447366 | None:intergenic | 30.0% | |
CTCAAAAATTTCTTCACAAG+AGG | - | chr5_4:16447620-16447639 | None:intergenic | 30.0% | |
TAACTTTAGGTACTTTGACT+AGG | - | chr5_4:16447891-16447910 | None:intergenic | 30.0% | |
AGTACCTAAAGTTATGACTA+AGG | + | chr5_4:16447897-16447916 | Msa0840610:intron | 30.0% | |
! | CAAGAATAGCTTATCTCTTT+TGG | - | chr5_4:16447938-16447957 | None:intergenic | 30.0% |
CAAAAGAGATAAGCTATTCT+TGG | + | chr5_4:16447936-16447955 | Msa0840610:intron | 30.0% | |
AATAATCAGTGTATGGAAGA+AGG | + | chr5_4:16448036-16448055 | Msa0840610:intron | 30.0% | |
TATGGAAGAAGGAACAAAAA+TGG | + | chr5_4:16448047-16448066 | Msa0840610:intron | 30.0% | |
ATGGAAGAAGGAACAAAAAT+GGG | + | chr5_4:16448048-16448067 | Msa0840610:intron | 30.0% | |
ACTAATTGCTGAATCTGAAT+TGG | + | chr5_4:16448125-16448144 | Msa0840610:intron | 30.0% | |
!! | GATAACATTCTGATTTGGAA+AGG | - | chr5_4:16448305-16448324 | None:intergenic | 30.0% |
GAATGTTATCATACTGATAC+AGG | + | chr5_4:16448315-16448334 | Msa0840610:intron | 30.0% | |
! | GGTATTAGAACTCTTGTTTA+AGG | + | chr5_4:16448416-16448435 | Msa0840610:intron | 30.0% |
! | GAGAGTTTAAGTTTACAAGA+AGG | + | chr5_4:16448483-16448502 | Msa0840610:intron | 30.0% |
! | TTCTAAGAGTCTCATTCAAA+TGG | - | chr5_4:16448528-16448547 | None:intergenic | 30.0% |
TGAATGAGACTCTTAGAATT+TGG | + | chr5_4:16448530-16448549 | Msa0840610:intron | 30.0% | |
GAATGAGACTCTTAGAATTT+GGG | + | chr5_4:16448531-16448550 | Msa0840610:intron | 30.0% | |
!! | ACAAATTAGTTTGCAAGGTT+GGG | - | chr5_4:16448567-16448586 | None:intergenic | 30.0% |
!! | TACAAATTAGTTTGCAAGGT+TGG | - | chr5_4:16448568-16448587 | None:intergenic | 30.0% |
AGACCATATCTTATCTAACA+TGG | + | chr5_4:16448620-16448639 | Msa0840610:intron | 30.0% | |
GACCATATCTTATCTAACAT+GGG | + | chr5_4:16448621-16448640 | Msa0840610:intron | 30.0% | |
TTATTTGCATTGTTGCAGAT+GGG | + | chr5_4:16448934-16448953 | Msa0840610:intron | 30.0% | |
AACGTACATAACAAAGATCA+CGG | - | chr5_4:16449378-16449397 | None:intergenic | 30.0% | |
! | ATCTTTGTTATGTACGTTAC+TGG | + | chr5_4:16449380-16449399 | Msa0840610:CDS | 30.0% |
CATAAACTGAAAACTTTGAG+CGG | - | chr5_4:16449450-16449469 | None:intergenic | 30.0% | |
! | AAAGTTTTCAGTTTATGCGA+CGG | + | chr5_4:16449453-16449472 | Msa0840610:intron | 30.0% |
! | GAGAGAAGTCTATATTTTCT+AGG | + | chr5_4:16449816-16449835 | Msa0840610:intron | 30.0% |
! | GAGAAGTCTATATTTTCTAG+GGG | + | chr5_4:16449818-16449837 | Msa0840610:intron | 30.0% |
AAAGCCAAACAAAAACCAAT+TGG | - | chr5_4:16450097-16450116 | None:intergenic | 30.0% | |
AAGTTGTTTAAATCCATTCC+TGG | + | chr5_4:16450153-16450172 | Msa0840610:intron | 30.0% | |
AGTTGTTTAAATCCATTCCT+GGG | + | chr5_4:16450154-16450173 | Msa0840610:intron | 30.0% | |
TTTCCTAGTAGTATAAGGAT+GGG | + | chr5_4:16450183-16450202 | Msa0840610:intron | 30.0% | |
AACATTTATAGGAATACCCT+TGG | + | chr5_4:16450245-16450264 | Msa0840610:intron | 30.0% | |
ACATTTATAGGAATACCCTT+GGG | + | chr5_4:16450246-16450265 | Msa0840610:intron | 30.0% | |
GGGAATCATTTATTAAAGTG+GGG | + | chr5_4:16450266-16450285 | Msa0840610:intron | 30.0% | |
ATTAAAAAAAAGCCATCCCT+TGG | + | chr5_4:16450308-16450327 | Msa0840610:intron | 30.0% | |
TTAAAAAAAAGCCATCCCTT+GGG | + | chr5_4:16450309-16450328 | Msa0840610:intron | 30.0% | |
!!! | ATGTGAAGCTATTTTTTCTC+CGG | + | chr5_4:16450348-16450367 | Msa0840610:intron | 30.0% |
TTCCTGCATATAAAAGATTC+CGG | - | chr5_4:16450370-16450389 | None:intergenic | 30.0% | |
! | TTCCCTACCCATATATTTTT+CGG | + | chr5_4:16450427-16450446 | Msa0840610:intron | 30.0% |
TGCATTCCCGAAAAATATAT+GGG | - | chr5_4:16450437-16450456 | None:intergenic | 30.0% | |
ATGCATTCCCGAAAAATATA+TGG | - | chr5_4:16450438-16450457 | None:intergenic | 30.0% | |
AATTTCATGGGTCTAAAAGT+TGG | + | chr5_4:16450540-16450559 | Msa0840610:intron | 30.0% | |
!! | GTCTAAAAGTTGGTTTGTAT+AGG | + | chr5_4:16450550-16450569 | Msa0840610:intron | 30.0% |
!! | TAAAAGTTGGTTTGTATAGG+TGG | + | chr5_4:16450553-16450572 | Msa0840610:intron | 30.0% |
AATAGAAAATATCGGAATGG+AGG | + | chr5_4:16450850-16450869 | Msa0840610:intron | 30.0% | |
! | GCCCAATTTTATATGATTTG+TGG | + | chr5_4:16450875-16450894 | Msa0840610:intron | 30.0% |
ATATTTCAGGCATTCCAAAT+TGG | + | chr5_4:16451276-16451295 | Msa0840610:intron | 30.0% | |
GATTAGATATAATCAAGCCT+AGG | - | chr5_4:16451426-16451445 | None:intergenic | 30.0% | |
AGATAAGTCAATCTCATCAT+CGG | - | chr5_4:16451486-16451505 | None:intergenic | 30.0% | |
!! | GATTGACTTATCTTCCTTTT+CGG | + | chr5_4:16451493-16451512 | Msa0840610:CDS | 30.0% |
!! | ATTGACTTATCTTCCTTTTC+GGG | + | chr5_4:16451494-16451513 | Msa0840610:CDS | 30.0% |
!! | TTTTTGCTATGACAAGTCAA+AGG | + | chr5_4:16451601-16451620 | Msa0840610:CDS | 30.0% |
GTTTAAGGACTCAAAAAGAA+TGG | + | chr5_4:16451751-16451770 | Msa0840610:CDS | 30.0% | |
! | AACAACAGCTAAAGTCTTAT+GGG | - | chr5_4:16452251-16452270 | None:intergenic | 30.0% |
AAACAACAGCTAAAGTCTTA+TGG | - | chr5_4:16452252-16452271 | None:intergenic | 30.0% | |
!!! | CTGTTGTTTTTGCTAAACTA+CGG | + | chr5_4:16452263-16452282 | Msa0840610:intron | 30.0% |
! | TACTTATTGTGATGTTGACT+GGG | - | chr5_4:16452410-16452429 | None:intergenic | 30.0% |
TATTAGTTACTCTGTGAACA+TGG | - | chr5_4:16452564-16452583 | None:intergenic | 30.0% | |
TTCACAGAGTAACTAATATC+AGG | + | chr5_4:16452566-16452585 | Msa0840610:intron | 30.0% | |
!! | AACACTAAACTCTCTAAAAC+CGG | - | chr5_4:16452817-16452836 | None:intergenic | 30.0% |
AGTAAGAAGTAAACTACCAT+TGG | + | chr5_4:16452920-16452939 | Msa0840610:intron | 30.0% | |
GTAAGAAGTAAACTACCATT+GGG | + | chr5_4:16452921-16452940 | Msa0840610:intron | 30.0% | |
!!! | GGCAGTTTGGATTATTTTTT+GGG | - | chr5_4:16452966-16452985 | None:intergenic | 30.0% |
!!! | TGGCAGTTTGGATTATTTTT+TGG | - | chr5_4:16452967-16452986 | None:intergenic | 30.0% |
!! | GCCTAATCCAAATTTTAACA+TGG | + | chr5_4:16453242-16453261 | Msa0840610:intron | 30.0% |
AGCTGTAACATGAACAAATT+CGG | - | chr5_4:16453360-16453379 | None:intergenic | 30.0% | |
AAAAGATTGTTCAAGAGTTG+AGG | - | chr5_4:16453453-16453472 | None:intergenic | 30.0% | |
! | TTAAAAGCACGATATGATAC+AGG | + | chr5_4:16453512-16453531 | Msa0840610:intron | 30.0% |
! | TAAAAGCACGATATGATACA+GGG | + | chr5_4:16453513-16453532 | Msa0840610:intron | 30.0% |
TGTGATAGAAACACAGATTA+AGG | + | chr5_4:16453883-16453902 | Msa0840610:intron | 30.0% | |
GTGATAGAAACACAGATTAA+GGG | + | chr5_4:16453884-16453903 | Msa0840610:intron | 30.0% | |
TGATAGAAACACAGATTAAG+GGG | + | chr5_4:16453885-16453904 | Msa0840610:intron | 30.0% | |
! | ACAAATGGACCTTTTCTTTT+TGG | + | chr5_4:16454086-16454105 | Msa0840610:intron | 30.0% |
!!! | GGTATTTTATTTTGTGACCA+AGG | + | chr5_4:16454271-16454290 | Msa0840610:CDS | 30.0% |
! | NNNTCCTTGTTTATTGGGAA+AGG | + | chr5_4:16454601-16454620 | Msa0840610:intron | 30.0% |
AAGAATAGGCAAAAATGTGA+AGG | - | chr5_4:16454688-16454707 | None:intergenic | 30.0% | |
! | GATTTAAATGGGAGTGTAAT+TGG | + | chr5_4:16454952-16454971 | Msa0840610:intron | 30.0% |
ACTGAATGCAACAGTTAAAT+AGG | - | chr5_4:16454983-16455002 | None:intergenic | 30.0% | |
TATTTAACTGTTGCATTCAG+TGG | + | chr5_4:16454982-16455001 | Msa0840610:intron | 30.0% | |
CTACACAATCAGCAATATTA+AGG | - | chr5_4:16455135-16455154 | None:intergenic | 30.0% | |
!! | TAACTTGTGGAGGATTTTAT+TGG | + | chr5_4:16455255-16455274 | Msa0840610:intron | 30.0% |
AAAAAAAAAAAAGGGCAACC+CGG | - | chr5_4:16455444-16455463 | None:intergenic | 30.0% | |
!! | ATTTGGTCTTGTCATAATGA+TGG | - | chr5_4:16455747-16455766 | None:intergenic | 30.0% |
AATAAACTCCGACGAGAAAT+CGG | + | chr5_4:16443442-16443461 | Msa0840610:five_prime_UTR | 35.0% | |
! | AAATTCGAATTCAGCATTGG+CGG | - | chr5_4:16443487-16443506 | None:intergenic | 35.0% |
TCGAAATTCGAATTCAGCAT+TGG | - | chr5_4:16443490-16443509 | None:intergenic | 35.0% | |
ATCAAGAACAGATAGTGTAG+TGG | + | chr5_4:16443541-16443560 | Msa0840610:five_prime_UTR | 35.0% | |
GTGAATTTATAACTCATCGC+CGG | - | chr5_4:16443600-16443619 | None:intergenic | 35.0% | |
AAGAAAACCGCAAGATAATC+AGG | + | chr5_4:16443852-16443871 | Msa0840610:CDS | 35.0% | |
TGGTTAAAGTCTTCACTTCA+TGG | + | chr5_4:16443970-16443989 | Msa0840610:intron | 35.0% | |
AATTGATGGAAACTGTAGAG+TGG | + | chr5_4:16444212-16444231 | Msa0840610:CDS | 35.0% | |
CAATCTTGACGATCCATATA+TGG | + | chr5_4:16444352-16444371 | Msa0840610:intron | 35.0% | |
! | ATGCATTGATAAGCGTTTAC+TGG | + | chr5_4:16444477-16444496 | Msa0840610:intron | 35.0% |
TCTAGTAAATTGATGGAGTG+AGG | + | chr5_4:16444556-16444575 | Msa0840610:intron | 35.0% | |
TTCAAGTCAAATATCCGTCA+TGG | + | chr5_4:16444640-16444659 | Msa0840610:CDS | 35.0% | |
! | TGTCATGGCCAATTTTATGA+AGG | + | chr5_4:16444666-16444685 | Msa0840610:CDS | 35.0% |
! | ATGGCCAATTTTATGAAGGA+TGG | + | chr5_4:16444670-16444689 | Msa0840610:CDS | 35.0% |
!! | GGCAACACTGATTCAAATTA+TGG | + | chr5_4:16444761-16444780 | Msa0840610:intron | 35.0% |
TTATGGTTGTTTACCACCAA+TGG | + | chr5_4:16444778-16444797 | Msa0840610:intron | 35.0% | |
AAACCTAATGGCACACAATA+GGG | - | chr5_4:16444893-16444912 | None:intergenic | 35.0% | |
TAAACCTAATGGCACACAAT+AGG | - | chr5_4:16444894-16444913 | None:intergenic | 35.0% | |
!! | TTCCCATAGAAGGTATTCAT+GGG | - | chr5_4:16444944-16444963 | None:intergenic | 35.0% |
!! | ATTCCCATAGAAGGTATTCA+TGG | - | chr5_4:16444945-16444964 | None:intergenic | 35.0% |
AGTCAGAAAATTCCCATAGA+AGG | - | chr5_4:16444954-16444973 | None:intergenic | 35.0% | |
AAAAGATTAGGGGATTTCTC+TGG | - | chr5_4:16445121-16445140 | None:intergenic | 35.0% | |
!!! | TCCCCTAATCTTTTTTTGTG+TGG | + | chr5_4:16445127-16445146 | Msa0840610:intron | 35.0% |
TGAATAGGTATAGTGGTTTG+AGG | - | chr5_4:16445310-16445329 | None:intergenic | 35.0% | |
TCGATGCAAGTAATAACATC+AGG | - | chr5_4:16445478-16445497 | None:intergenic | 35.0% | |
! | GTTTGGGTTTATCAAAATGC+TGG | - | chr5_4:16445523-16445542 | None:intergenic | 35.0% |
!! | CATGAATGCTTTTAGAAGAG+GGG | + | chr5_4:16445815-16445834 | Msa0840610:intron | 35.0% |
CAAGAAAGAAAAGAACCATC+GGG | + | chr5_4:16446120-16446139 | Msa0840610:CDS | 35.0% | |
TTGATCAGGTATGTTTCATC+AGG | + | chr5_4:16446331-16446350 | Msa0840610:intron | 35.0% | |
TGATCAGGTATGTTTCATCA+GGG | + | chr5_4:16446332-16446351 | Msa0840610:intron | 35.0% | |
TTATCATCAACTTACACGAC+AGG | - | chr5_4:16446518-16446537 | None:intergenic | 35.0% | |
CAAAGCACATAAACACTTAC+TGG | - | chr5_4:16446733-16446752 | None:intergenic | 35.0% | |
CAGGAATAATCCAATCACAT+AGG | - | chr5_4:16446825-16446844 | None:intergenic | 35.0% | |
AATGCGAGAAGACTATCTTA+AGG | - | chr5_4:16446852-16446871 | None:intergenic | 35.0% | |
TTGTTAAGGAGGACAACAAT+TGG | + | chr5_4:16447106-16447125 | Msa0840610:CDS | 35.0% | |
CAAGCAGAAAGGATACAAAA+TGG | - | chr5_4:16447139-16447158 | None:intergenic | 35.0% | |
! | TTTTGTATCCTTTCTGCTTG+TGG | + | chr5_4:16447139-16447158 | Msa0840610:intron | 35.0% |
TTTGTATCCTTTCTGCTTGT+GGG | + | chr5_4:16447140-16447159 | Msa0840610:intron | 35.0% | |
! | CTTTTCTTTTATGAGCTGCA+GGG | + | chr5_4:16447197-16447216 | Msa0840610:intron | 35.0% |
! | CAATCAAAAATTGATTCCGG+AGG | - | chr5_4:16447223-16447242 | None:intergenic | 35.0% |
! | CTCCGGAATCAATTTTTGAT+TGG | + | chr5_4:16447221-16447240 | Msa0840610:CDS | 35.0% |
TCAATAACCAAGCTTTCTCA+AGG | + | chr5_4:16447281-16447300 | Msa0840610:CDS | 35.0% | |
TTTGCAATGCCAAAATGGTA+TGG | + | chr5_4:16447318-16447337 | Msa0840610:intron | 35.0% | |
GTAGCACACCAGAAAAATAA+AGG | - | chr5_4:16447497-16447516 | None:intergenic | 35.0% | |
ATAAAGAACCAACGAGAAGA+TGG | - | chr5_4:16447547-16447566 | None:intergenic | 35.0% | |
ACGAAGCAGCATAAAAAAAG+TGG | - | chr5_4:16447695-16447714 | None:intergenic | 35.0% | |
AGCACCTTAGTCATAACTTT+AGG | - | chr5_4:16447904-16447923 | None:intergenic | 35.0% | |
TAAGCTATTCTTGGTACCAT+AGG | + | chr5_4:16447945-16447964 | Msa0840610:intron | 35.0% | |
AAGCTATTCTTGGTACCATA+GGG | + | chr5_4:16447946-16447965 | Msa0840610:intron | 35.0% | |
ACGTGGTAATAATCAGTGTA+TGG | + | chr5_4:16448029-16448048 | Msa0840610:intron | 35.0% | |
TGATATTGCATTCTCTCTCT+AGG | - | chr5_4:16448094-16448113 | None:intergenic | 35.0% | |
TTCAGCAATTAGTTACGTAG+AGG | - | chr5_4:16448118-16448137 | None:intergenic | 35.0% | |
!!! | TAGGATTAGCTCACACTTTT+GGG | + | chr5_4:16448219-16448238 | Msa0840610:intron | 35.0% |
AAAAGAAAGAGAAACAACCC+AGG | - | chr5_4:16448268-16448287 | None:intergenic | 35.0% | |
!! | TCTGATTTGGAAAGGAAAAG+AGG | - | chr5_4:16448297-16448316 | None:intergenic | 35.0% |
TTATCATACTGATACAGGTC+TGG | + | chr5_4:16448320-16448339 | Msa0840610:intron | 35.0% | |
AAAAATAGCAAAGAGCAGAG+AGG | - | chr5_4:16448379-16448398 | None:intergenic | 35.0% | |
TTGTTTAAGGGAGACTTGAA+TGG | + | chr5_4:16448429-16448448 | Msa0840610:intron | 35.0% | |
! | GTTTAAGTTTACAAGAAGGG+AGG | + | chr5_4:16448487-16448506 | Msa0840610:intron | 35.0% |
GTCCCATGTTAGATAAGATA+TGG | - | chr5_4:16448626-16448645 | None:intergenic | 35.0% | |
TCATTGAACCACCCATTATT+CGG | - | chr5_4:16448705-16448724 | None:intergenic | 35.0% | |
CAATGAATCTTGGATAAGCT+CGG | + | chr5_4:16448719-16448738 | Msa0840610:intron | 35.0% | |
GCCTACAAAAATGACTTCTA+TGG | + | chr5_4:16448777-16448796 | Msa0840610:intron | 35.0% | |
!!! | GCCATAGAAGTCATTTTTGT+AGG | - | chr5_4:16448781-16448800 | None:intergenic | 35.0% |
AAAAATGACTTCTATGGCGA+GGG | + | chr5_4:16448783-16448802 | Msa0840610:intron | 35.0% | |
ACGAGAAGCTTACAAATTCA+GGG | - | chr5_4:16448915-16448934 | None:intergenic | 35.0% | |
AACGAGAAGCTTACAAATTC+AGG | - | chr5_4:16448916-16448935 | None:intergenic | 35.0% | |
GTTATTTGCATTGTTGCAGA+TGG | + | chr5_4:16448933-16448952 | Msa0840610:intron | 35.0% | |
! | TACTTGTGAAAGCATGATTC+AGG | + | chr5_4:16449256-16449275 | Msa0840610:intron | 35.0% |
ACGTACATAACAAAGATCAC+GGG | - | chr5_4:16449377-16449396 | None:intergenic | 35.0% | |
!! | CGAAATGATGATGGAAGTTA+TGG | + | chr5_4:16449406-16449425 | Msa0840610:CDS | 35.0% |
!! | ATGATGATGGAAGTTATGGT+AGG | + | chr5_4:16449410-16449429 | Msa0840610:intron | 35.0% |
TCTAGAGAACATGATAACTG+TGG | + | chr5_4:16449716-16449735 | Msa0840610:CDS | 35.0% | |
ACTTCTCTCTTGAACTTTGA+AGG | - | chr5_4:16449805-16449824 | None:intergenic | 35.0% | |
! | AATAGTTGTTATAAGGGCGT+TGG | + | chr5_4:16449896-16449915 | Msa0840610:intron | 35.0% |
! | GAAAATAGAAGGTACAGTCA+AGG | - | chr5_4:16449965-16449984 | None:intergenic | 35.0% |
CCTCAAAAGCAGAAAATAGA+AGG | - | chr5_4:16449976-16449995 | None:intergenic | 35.0% | |
!! | CCTTCTATTTTCTGCTTTTG+AGG | + | chr5_4:16449973-16449992 | Msa0840610:intron | 35.0% |
ATTGATACAAACACTTGGAG+TGG | - | chr5_4:16450017-16450036 | None:intergenic | 35.0% | |
GTTTCCTAGTAGTATAAGGA+TGG | + | chr5_4:16450182-16450201 | Msa0840610:intron | 35.0% | |
ATTCCCATCCTTATACTACT+AGG | - | chr5_4:16450189-16450208 | None:intergenic | 35.0% | |
TGGGAATCCTATTCTTATGT+AGG | + | chr5_4:16450202-16450221 | Msa0840610:intron | 35.0% | |
ATTTATTAAAGTGGGGTGCA+GGG | + | chr5_4:16450273-16450292 | Msa0840610:intron | 35.0% | |
! | TCCCTACCCATATATTTTTC+GGG | + | chr5_4:16450428-16450447 | Msa0840610:intron | 35.0% |
TCCCGAAAAATATATGGGTA+GGG | - | chr5_4:16450432-16450451 | None:intergenic | 35.0% | |
TTCCCGAAAAATATATGGGT+AGG | - | chr5_4:16450433-16450452 | None:intergenic | 35.0% | |
TCTTATGCAGATTGATCTGA+AGG | + | chr5_4:16450636-16450655 | Msa0840610:CDS | 35.0% | |
CTTATGCAGATTGATCTGAA+GGG | + | chr5_4:16450637-16450656 | Msa0840610:CDS | 35.0% | |
CCACACTATTTAACATTTGG+CGG | - | chr5_4:16450705-16450724 | None:intergenic | 35.0% | |
CAGCCACACTATTTAACATT+TGG | - | chr5_4:16450708-16450727 | None:intergenic | 35.0% | |
CAAATGTTAAATAGTGTGGC+TGG | + | chr5_4:16450706-16450725 | Msa0840610:CDS | 35.0% | |
CAATGAGTAGTTTCAAATGC+TGG | + | chr5_4:16450912-16450931 | Msa0840610:intron | 35.0% | |
GAGAACATATTAACCATGAC+AGG | - | chr5_4:16451010-16451029 | None:intergenic | 35.0% | |
ATCGAGAGAAGTAGAGTTAA+CGG | - | chr5_4:16451077-16451096 | None:intergenic | 35.0% | |
TGAATATTCAGATGACGATG+AGG | + | chr5_4:16451132-16451151 | Msa0840610:CDS | 35.0% | |
CATTCCCTCATTTATAGTGT+TGG | + | chr5_4:16451194-16451213 | Msa0840610:intron | 35.0% | |
TGCACCAACACTATAAATGA+GGG | - | chr5_4:16451201-16451220 | None:intergenic | 35.0% | |
ATGCACCAACACTATAAATG+AGG | - | chr5_4:16451202-16451221 | None:intergenic | 35.0% | |
CATTCCCTCATTTATAGTGT+CGG | + | chr5_4:16451194-16451213 | Msa0840610:intron | 35.0% | |
AATGCCGACACTATAAATGA+GGG | - | chr5_4:16451226-16451245 | None:intergenic | 35.0% | |
AAATGCCGACACTATAAATG+AGG | - | chr5_4:16451227-16451246 | None:intergenic | 35.0% | |
GAGAGTGATGTTAGAAAAAC+AGG | + | chr5_4:16451303-16451322 | Msa0840610:CDS | 35.0% | |
!! | TTATTTCTGAACTGAAGCCT+TGG | + | chr5_4:16451451-16451470 | Msa0840610:intron | 35.0% |
GATAAGTCAATCTCATCATC+GGG | - | chr5_4:16451485-16451504 | None:intergenic | 35.0% | |
GGTGTATTCTGATTCCTTTA+TGG | + | chr5_4:16451672-16451691 | Msa0840610:intron | 35.0% | |
! | ACATCTAATGGATCTTGTTG+CGG | + | chr5_4:16451721-16451740 | Msa0840610:CDS | 35.0% |
TCAGTTAGTTACAGTAGTGT+AGG | - | chr5_4:16451957-16451976 | None:intergenic | 35.0% | |
ACACTACTGTAACTAACTGA+AGG | + | chr5_4:16451957-16451976 | Msa0840610:intron | 35.0% | |
GAACTCCAAAAATTTAGCTG+AGG | + | chr5_4:16452171-16452190 | Msa0840610:intron | 35.0% | |
! | TCTCTCCTCAGCTAAATTTT+TGG | - | chr5_4:16452179-16452198 | None:intergenic | 35.0% |
AAAAATTTAGCTGAGGAGAG+AGG | + | chr5_4:16452178-16452197 | Msa0840610:intron | 35.0% | |
TCAGATTCAGCTGTTTATCT+GGG | - | chr5_4:16452358-16452377 | None:intergenic | 35.0% | |
CTACTTATTGTGATGTTGAC+TGG | - | chr5_4:16452411-16452430 | None:intergenic | 35.0% | |
CAATAAGTAGAGAGAGAGAA+CGG | + | chr5_4:16452421-16452440 | Msa0840610:intron | 35.0% | |
AGAGTAACTAATATCAGGTC+TGG | + | chr5_4:16452571-16452590 | Msa0840610:intron | 35.0% | |
ACTAATATCAGGTCTGGTAA+TGG | + | chr5_4:16452577-16452596 | Msa0840610:intron | 35.0% | |
CTAGTAACTAGTATCAAGTC+TGG | + | chr5_4:16452718-16452737 | Msa0840610:intron | 35.0% | |
ACTAGTATCAAGTCTGGTAA+TGG | + | chr5_4:16452724-16452743 | Msa0840610:intron | 35.0% | |
!! | ACACTAAACTCTCTAAAACC+GGG | - | chr5_4:16452816-16452835 | None:intergenic | 35.0% |
! | GTTTTTGCTCTTAAGCAACT+TGG | - | chr5_4:16452987-16453006 | None:intergenic | 35.0% |
! | AGTGATTTTCTGAATGAGAG+AGG | + | chr5_4:16453022-16453041 | Msa0840610:intron | 35.0% |
GATTTATGTGGATTCATCAC+AGG | - | chr5_4:16453056-16453075 | None:intergenic | 35.0% | |
TCATAAGCAGGTTACTGTAT+AGG | + | chr5_4:16453130-16453149 | Msa0840610:intron | 35.0% | |
GAATCTGTGATAAAGTAACC+TGG | - | chr5_4:16453175-16453194 | None:intergenic | 35.0% | |
!!! | TCTAGCTTTTGAGTTTGAGT+TGG | + | chr5_4:16453219-16453238 | Msa0840610:intron | 35.0% |
!!! | CTAGCTTTTGAGTTTGAGTT+GGG | + | chr5_4:16453220-16453239 | Msa0840610:intron | 35.0% |
GCTGTAACATGAACAAATTC+GGG | - | chr5_4:16453359-16453378 | None:intergenic | 35.0% | |
TTGACTAGAGATGTGGTTAA+AGG | + | chr5_4:16453418-16453437 | Msa0840610:intron | 35.0% | |
! | TCTGTGTTTCTATCACAGAT+GGG | - | chr5_4:16453880-16453899 | None:intergenic | 35.0% |
! | ATCTGTGTTTCTATCACAGA+TGG | - | chr5_4:16453881-16453900 | None:intergenic | 35.0% |
GATAGAAACACAGATTAAGG+GGG | + | chr5_4:16453886-16453905 | Msa0840610:intron | 35.0% | |
GCATAGACACCAAAAAGAAA+AGG | - | chr5_4:16454098-16454117 | None:intergenic | 35.0% | |
!!! | TTTCTTTTTGGTGTCTATGC+AGG | + | chr5_4:16454098-16454117 | Msa0840610:intron | 35.0% |
CTCCATTATCATCAATGTTC+AGG | + | chr5_4:16454143-16454162 | Msa0840610:intron | 35.0% | |
! | TGCCTGAACATTGATGATAA+TGG | - | chr5_4:16454148-16454167 | None:intergenic | 35.0% |
TGAAGTAAATGTGTGTTGTG+TGG | + | chr5_4:16454216-16454235 | Msa0840610:intron | 35.0% | |
ATACTGTAATGTGATGAAGC+TGG | - | chr5_4:16454251-16454270 | None:intergenic | 35.0% | |
AGCTTCATCACATTACAGTA+TGG | + | chr5_4:16454250-16454269 | Msa0840610:CDS | 35.0% | |
TGTCAAACACATTCTTGTGA+TGG | + | chr5_4:16454462-16454481 | Msa0840610:intron | 35.0% | |
GTTGATTGCAACTATATTCG+TGG | + | chr5_4:16454626-16454645 | Msa0840610:intron | 35.0% | |
AAGCTTCGTACAACAAGAAT+AGG | - | chr5_4:16454702-16454721 | None:intergenic | 35.0% | |
AACATACGCCATTCATTAGT+GGG | - | chr5_4:16454725-16454744 | None:intergenic | 35.0% | |
!! | CTGTAGGTTGATGTTGATAT+TGG | + | chr5_4:16454785-16454804 | Msa0840610:intron | 35.0% |
! | TACTGTTGCTAATGGAGTTT+TGG | + | chr5_4:16454814-16454833 | Msa0840610:CDS | 35.0% |
! | ACTGTTGCTAATGGAGTTTT+GGG | + | chr5_4:16454815-16454834 | Msa0840610:CDS | 35.0% |
TATTGGTGTGATTACAACAC+TGG | + | chr5_4:16454844-16454863 | Msa0840610:CDS | 35.0% | |
! | TGATATGGCTTTTCTTGTAC+AGG | + | chr5_4:16454871-16454890 | Msa0840610:CDS | 35.0% |
AGCAAGTCGTAGGATTTAAA+TGG | + | chr5_4:16454940-16454959 | Msa0840610:intron | 35.0% | |
GCAAGTCGTAGGATTTAAAT+GGG | + | chr5_4:16454941-16454960 | Msa0840610:intron | 35.0% | |
AATTCACTTCTGATGACTGT+GGG | + | chr5_4:16455108-16455127 | Msa0840610:intron | 35.0% | |
! | CAGATTTGTTCTCGATTTGA+AGG | - | chr5_4:16455159-16455178 | None:intergenic | 35.0% |
GAAAATTAGGGGAAATGGTA+AGG | - | chr5_4:16455182-16455201 | None:intergenic | 35.0% | |
TTTGGGAAAATTAGGGGAAA+TGG | - | chr5_4:16455187-16455206 | None:intergenic | 35.0% | |
GGTGACAAGCAAAACAATTT+GGG | - | chr5_4:16455204-16455223 | None:intergenic | 35.0% | |
TTTATAACTCCTAGCACATG+CGG | - | chr5_4:16455225-16455244 | None:intergenic | 35.0% | |
AAACAACCTCGTGTAAAAAC+AGG | + | chr5_4:16455346-16455365 | Msa0840610:intron | 35.0% | |
AACAACCTCGTGTAAAAACA+GGG | + | chr5_4:16455347-16455366 | Msa0840610:intron | 35.0% | |
! | TGTAGTGTTACTACTATGCA+TGG | + | chr5_4:16455468-16455487 | Msa0840610:intron | 35.0% |
! | GTAGTGTTACTACTATGCAT+GGG | + | chr5_4:16455469-16455488 | Msa0840610:intron | 35.0% |
TGCTTGACAAGTTCAAACAT+GGG | + | chr5_4:16455534-16455553 | Msa0840610:intron | 35.0% | |
! | TCATTTAGAGCTCAAAACTG+CGG | + | chr5_4:16455698-16455717 | Msa0840610:CDS | 35.0% |
!! | TCTTGTCATAATGATGGATC+TGG | - | chr5_4:16455741-16455760 | None:intergenic | 35.0% |
! | TATTTAGTTCAGGTTCAAGC+TGG | + | chr5_4:16455929-16455948 | Msa0840610:three_prime_UTR | 35.0% |
GTCGATCGTTTATTCACATG+AGG | + | chr5_4:16443791-16443810 | Msa0840610:CDS | 40.0% | |
!! | TCACATGAGGTACTTCGTTT+TGG | + | chr5_4:16443804-16443823 | Msa0840610:CDS | 40.0% |
ACGATCCATATATGGTTGTG+TGG | + | chr5_4:16444360-16444379 | Msa0840610:intron | 40.0% | |
CTTGACCACACAACCATATA+TGG | - | chr5_4:16444368-16444387 | None:intergenic | 40.0% | |
TGGTCAAGATTATCTCCTCT+CGG | + | chr5_4:16444380-16444399 | Msa0840610:intron | 40.0% | |
TCAACATAAAACGATCCGAG+AGG | - | chr5_4:16444398-16444417 | None:intergenic | 40.0% | |
! | GCCAATTTTATGAAGGATGG+CGG | + | chr5_4:16444673-16444692 | Msa0840610:CDS | 40.0% |
ATGCTGGAAACCCAAAAATC+CGG | - | chr5_4:16444730-16444749 | None:intergenic | 40.0% | |
! | GTTTTACTAGATGCCATTGG+TGG | - | chr5_4:16444794-16444813 | None:intergenic | 40.0% |
AGTCCCATGAATACCTTCTA+TGG | + | chr5_4:16444938-16444957 | Msa0840610:intron | 40.0% | |
GTCCCATGAATACCTTCTAT+GGG | + | chr5_4:16444939-16444958 | Msa0840610:intron | 40.0% | |
GACAGATTTCAGCTTCACTT+TGG | - | chr5_4:16445159-16445178 | None:intergenic | 40.0% | |
TAGTGGTTTGAGGAGGAATA+AGG | - | chr5_4:16445300-16445319 | None:intergenic | 40.0% | |
ATAGGTATAGTGGTTTGAGG+AGG | - | chr5_4:16445307-16445326 | None:intergenic | 40.0% | |
TTGTAGCGTCCAGCTATATT+TGG | - | chr5_4:16445383-16445402 | None:intergenic | 40.0% | |
! | TCAAAATGCTGGTACTGAAC+AGG | - | chr5_4:16445512-16445531 | None:intergenic | 40.0% |
GTCTATGAAATTGAAGCAGC+TGG | - | chr5_4:16445591-16445610 | None:intergenic | 40.0% | |
AGAAAAGAACCATCGGGTTA+TGG | + | chr5_4:16446126-16446145 | Msa0840610:CDS | 40.0% | |
!! | ATTTGGGTTGTTGTAGCAGA+TGG | + | chr5_4:16446254-16446273 | Msa0840610:intron | 40.0% |
TCTTAAATGCATGCAGCATC+AGG | + | chr5_4:16446613-16446632 | Msa0840610:intron | 40.0% | |
CTTAAATGCATGCAGCATCA+GGG | + | chr5_4:16446614-16446633 | Msa0840610:intron | 40.0% | |
! | TACAAATCTGGGATGGACAA+TGG | + | chr5_4:16446677-16446696 | Msa0840610:CDS | 40.0% |
! | ACAAATCTGGGATGGACAAT+GGG | + | chr5_4:16446678-16446697 | Msa0840610:CDS | 40.0% |
AAGACTATCTTAAGGAGGAC+AGG | - | chr5_4:16446844-16446863 | None:intergenic | 40.0% | |
!!! | GATATTGTTTTTGGATCCCC+AGG | + | chr5_4:16447041-16447060 | Msa0840610:intron | 40.0% |
AGGAGGACAACAATTGGAAA+TGG | + | chr5_4:16447112-16447131 | Msa0840610:CDS | 40.0% | |
CCTGCAGCTCATAAAAGAAA+AGG | - | chr5_4:16447199-16447218 | None:intergenic | 40.0% | |
! | CCTTTTCTTTTATGAGCTGC+AGG | + | chr5_4:16447196-16447215 | Msa0840610:intron | 40.0% |
AATGCTTCCTTGAGAAAGCT+TGG | - | chr5_4:16447291-16447310 | None:intergenic | 40.0% | |
! | AAGCTTTCTCAAGGAAGCAT+TGG | + | chr5_4:16447290-16447309 | Msa0840610:CDS | 40.0% |
! | CGTCTTTTGCAATGCCAAAA+TGG | + | chr5_4:16447313-16447332 | Msa0840610:CDS | 40.0% |
! | TGCAGGAAACCATACCATTT+TGG | - | chr5_4:16447330-16447349 | None:intergenic | 40.0% |
GATATATCAACCTACTGCTG+TGG | + | chr5_4:16447361-16447380 | Msa0840610:intron | 40.0% | |
! | TTTTATGTCACCACAGCAGT+AGG | - | chr5_4:16447374-16447393 | None:intergenic | 40.0% |
! | ATTTTCCTTCTGACATCGAC+AGG | + | chr5_4:16447415-16447434 | Msa0840610:intron | 40.0% |
AGGACAGAAAATAACGCACA+AGG | - | chr5_4:16447477-16447496 | None:intergenic | 40.0% | |
AAACACAACCATCTTCTCGT+TGG | + | chr5_4:16447536-16447555 | Msa0840610:intron | 40.0% | |
! | GTTGGTTCTTTATGTAGCCA+AGG | + | chr5_4:16447554-16447573 | Msa0840610:intron | 40.0% |
! | TTTTGAGCTTGTGATGAGCA+TGG | + | chr5_4:16447633-16447652 | Msa0840610:CDS | 40.0% |
GAGAACTACTTACCTAGTCT+TGG | + | chr5_4:16447861-16447880 | Msa0840610:intron | 40.0% | |
AGCTATTCTTGGTACCATAG+GGG | + | chr5_4:16447947-16447966 | Msa0840610:intron | 40.0% | |
TATTACCACGTCCTATCAGA+TGG | - | chr5_4:16448020-16448039 | None:intergenic | 40.0% | |
GCTGAATCTGAATTGGCAAA+AGG | + | chr5_4:16448132-16448151 | Msa0840610:intron | 40.0% | |
ATCTGAATTGGCAAAAGGAG+TGG | + | chr5_4:16448137-16448156 | Msa0840610:intron | 40.0% | |
TCTGAATTGGCAAAAGGAGT+GGG | + | chr5_4:16448138-16448157 | Msa0840610:intron | 40.0% | |
GGGGCTATATAACCTGATAA+CGG | + | chr5_4:16448178-16448197 | Msa0840610:intron | 40.0% | |
GGGCTATATAACCTGATAAC+GGG | + | chr5_4:16448179-16448198 | Msa0840610:intron | 40.0% | |
!!! | CTAGGATTAGCTCACACTTT+TGG | + | chr5_4:16448218-16448237 | Msa0840610:intron | 40.0% |
!! | TCACACTTTTGGGAGAGATT+AGG | + | chr5_4:16448229-16448248 | Msa0840610:intron | 40.0% |
! | TTTTTCTTGTACCTGTCCAC+CGG | + | chr5_4:16448395-16448414 | Msa0840610:intron | 40.0% |
! | AACAAGAGTTCTAATACCGG+TGG | - | chr5_4:16448414-16448433 | None:intergenic | 40.0% |
GAGACTCTTAGAATTTGGGT+TGG | + | chr5_4:16448535-16448554 | Msa0840610:intron | 40.0% | |
!! | TTAGTTTGCAAGGTTGGGTA+TGG | - | chr5_4:16448562-16448581 | None:intergenic | 40.0% |
ATGGGTGGTTCAATGAATCT+TGG | + | chr5_4:16448709-16448728 | Msa0840610:intron | 40.0% | |
TCGGATGCCATCTTATAGTT+TGG | + | chr5_4:16448738-16448757 | Msa0840610:intron | 40.0% | |
CGGATGCCATCTTATAGTTT+GGG | + | chr5_4:16448739-16448758 | Msa0840610:intron | 40.0% | |
TGCCATCTTATAGTTTGGGT+TGG | + | chr5_4:16448743-16448762 | Msa0840610:intron | 40.0% | |
GTCCAACCCAAACTATAAGA+TGG | - | chr5_4:16448748-16448767 | None:intergenic | 40.0% | |
CAAAAATGACTTCTATGGCG+AGG | + | chr5_4:16448782-16448801 | Msa0840610:intron | 40.0% | |
CCACAATGAACACATGACAT+TGG | - | chr5_4:16449340-16449359 | None:intergenic | 40.0% | |
CCAATGTCATGTGTTCATTG+TGG | + | chr5_4:16449337-16449356 | Msa0840610:intron | 40.0% | |
CGTACATAACAAAGATCACG+GGG | - | chr5_4:16449376-16449395 | None:intergenic | 40.0% | |
GGGGATGATAACATGTACTA+AGG | - | chr5_4:16449636-16449655 | None:intergenic | 40.0% | |
! | CTCTCTTGAACTTTGAAGGA+TGG | - | chr5_4:16449801-16449820 | None:intergenic | 40.0% |
TCTCGATGTCGTCAATAGAA+TGG | + | chr5_4:16449841-16449860 | Msa0840610:intron | 40.0% | |
CTCGATGTCGTCAATAGAAT+GGG | + | chr5_4:16449842-16449861 | Msa0840610:intron | 40.0% | |
CTATTAGCAAAACGCAAGAG+TGG | - | chr5_4:16449881-16449900 | None:intergenic | 40.0% | |
ATACAAACACTTGGAGTGGA+AGG | - | chr5_4:16450013-16450032 | None:intergenic | 40.0% | |
AGGAAACTTATTCCCAGGAA+TGG | - | chr5_4:16450169-16450188 | None:intergenic | 40.0% | |
CTACTAGGAAACTTATTCCC+AGG | - | chr5_4:16450174-16450193 | None:intergenic | 40.0% | |
CATTTATTAAAGTGGGGTGC+AGG | + | chr5_4:16450272-16450291 | Msa0840610:intron | 40.0% | |
TTTATTAAAGTGGGGTGCAG+GGG | + | chr5_4:16450274-16450293 | Msa0840610:intron | 40.0% | |
! | TAGTTTTCATTCCCAAGGGA+TGG | - | chr5_4:16450323-16450342 | None:intergenic | 40.0% |
TCCCTTGGGAATGAAAACTA+TGG | + | chr5_4:16450323-16450342 | Msa0840610:intron | 40.0% | |
! | CCCATAGTTTTCATTCCCAA+GGG | - | chr5_4:16450327-16450346 | None:intergenic | 40.0% |
CCCTTGGGAATGAAAACTAT+GGG | + | chr5_4:16450324-16450343 | Msa0840610:intron | 40.0% | |
! | TCCCATAGTTTTCATTCCCA+AGG | - | chr5_4:16450328-16450347 | None:intergenic | 40.0% |
! | CTCCGGAATCTTTTATATGC+AGG | + | chr5_4:16450365-16450384 | Msa0840610:intron | 40.0% |
!! | AAGTTGGTTTGTATAGGTGG+AGG | + | chr5_4:16450556-16450575 | Msa0840610:intron | 40.0% |
!!! | TCCCATTTCGAGGTTTTAAG+GGG | - | chr5_4:16450594-16450613 | None:intergenic | 40.0% |
!! | CTCCCATTTCGAGGTTTTAA+GGG | - | chr5_4:16450595-16450614 | None:intergenic | 40.0% |
CCGCCAAATGTTAAATAGTG+TGG | + | chr5_4:16450702-16450721 | Msa0840610:CDS | 40.0% | |
TACACACACACGTACATGTA+TGG | + | chr5_4:16450818-16450837 | Msa0840610:intron | 40.0% | |
! | TGGATCTTTTCTCTCTCTAC+AGG | + | chr5_4:16450932-16450951 | Msa0840610:intron | 40.0% |
TCTCTACAGGTTTACGTGAA+TGG | + | chr5_4:16450945-16450964 | Msa0840610:intron | 40.0% | |
AGCATTCCTTTCATCTGACT+GGG | - | chr5_4:16450975-16450994 | None:intergenic | 40.0% | |
TTAACCATGACAGGAATTCG+TGG | - | chr5_4:16451001-16451020 | None:intergenic | 40.0% | |
CATCACTCTCAAGACCAATT+TGG | - | chr5_4:16451293-16451312 | None:intergenic | 40.0% | |
GAGCATTATCACGATCATCT+CGG | - | chr5_4:16451529-16451548 | None:intergenic | 40.0% | |
! | GAGATGATCGTGATAATGCT+CGG | + | chr5_4:16451528-16451547 | Msa0840610:CDS | 40.0% |
! | AGATGATCGTGATAATGCTC+GGG | + | chr5_4:16451529-16451548 | Msa0840610:CDS | 40.0% |
GATTGCTGGAAGATATCTGA+TGG | + | chr5_4:16451551-16451570 | Msa0840610:CDS | 40.0% | |
TCCTTTATGGTGAACTGTGA+AGG | + | chr5_4:16451685-16451704 | Msa0840610:intron | 40.0% | |
TCCTGCAGGAAAACATCTAA+TGG | + | chr5_4:16451709-16451728 | Msa0840610:CDS | 40.0% | |
! | TCCATTAGATGTTTTCCTGC+AGG | - | chr5_4:16451713-16451732 | None:intergenic | 40.0% |
CTCAAAAAGAATGGACCATG+TGG | + | chr5_4:16451760-16451779 | Msa0840610:CDS | 40.0% | |
AGAGGAACTGGTAGAGAAAA+GGG | + | chr5_4:16452196-16452215 | Msa0840610:intron | 40.0% | |
CTCAGATTCAGCTGTTTATC+TGG | - | chr5_4:16452359-16452378 | None:intergenic | 40.0% | |
CAGATAAACAGCTGAATCTG+AGG | + | chr5_4:16452357-16452376 | Msa0840610:intron | 40.0% | |
AGGTTGAATGCCTATCATCT+GGG | + | chr5_4:16452377-16452396 | Msa0840610:intron | 40.0% | |
TGAATTCTGCGCTATCTAAG+AGG | - | chr5_4:16452491-16452510 | None:intergenic | 40.0% | |
CATTTCACAGCTTACAACTG+AGG | + | chr5_4:16452509-16452528 | Msa0840610:intron | 40.0% | |
!! | AATATCAGGTCTGGTAATGG+TGG | + | chr5_4:16452580-16452599 | Msa0840610:intron | 40.0% |
CTCTTGATGCTTCTCACTAT+AGG | - | chr5_4:16452631-16452650 | None:intergenic | 40.0% | |
AGTTTAGCGTTAGAGACCAT+AGG | + | chr5_4:16452649-16452668 | Msa0840610:intron | 40.0% | |
AGACCATAGGAGTTGTAACT+GGG | + | chr5_4:16452662-16452681 | Msa0840610:intron | 40.0% | |
!! | AGTATCAAGTCTGGTAATGG+TGG | + | chr5_4:16452727-16452746 | Msa0840610:intron | 40.0% |
TGCTTCTCAGTTCTCACTAT+AGG | - | chr5_4:16452778-16452797 | None:intergenic | 40.0% | |
AGTGTTAGAATAGAGACCAC+AGG | + | chr5_4:16452831-16452850 | Msa0840610:intron | 40.0% | |
! | GGCATCACTCATATCAGTTT+TGG | + | chr5_4:16452869-16452888 | Msa0840610:intron | 40.0% |
!!! | CACTCATATCAGTTTTGGAG+AGG | + | chr5_4:16452874-16452893 | Msa0840610:intron | 40.0% |
!!! | TCATATCAGTTTTGGAGAGG+AGG | + | chr5_4:16452877-16452896 | Msa0840610:intron | 40.0% |
GAAATTAAGCATCAGCCCAA+TGG | - | chr5_4:16452939-16452958 | None:intergenic | 40.0% | |
TCTTAAGCAACTTGGCAGTT+TGG | - | chr5_4:16452979-16452998 | None:intergenic | 40.0% | |
CTGTTTACCTAGACACATCA+AGG | - | chr5_4:16453097-16453116 | None:intergenic | 40.0% | |
! | GAAGTATCACACTCATAAGC+AGG | + | chr5_4:16453118-16453137 | Msa0840610:intron | 40.0% |
ACTCAAAAGCTAGAGTGAGA+AGG | - | chr5_4:16453213-16453232 | None:intergenic | 40.0% | |
AGCGAGTGTGATAACATGTT+TGG | + | chr5_4:16453314-16453333 | Msa0840610:intron | 40.0% | |
GCGAGTGTGATAACATGTTT+GGG | + | chr5_4:16453315-16453334 | Msa0840610:intron | 40.0% | |
CGAGTGTGATAACATGTTTG+GGG | + | chr5_4:16453316-16453335 | Msa0840610:intron | 40.0% | |
! | TTCCTCATTGACTAGAGATG+TGG | + | chr5_4:16453411-16453430 | Msa0840610:intron | 40.0% |
AACCACATCTCTAGTCAATG+AGG | - | chr5_4:16453416-16453435 | None:intergenic | 40.0% | |
CTAGAGATGTGGTTAAAGGT+TGG | + | chr5_4:16453422-16453441 | Msa0840610:intron | 40.0% | |
TTCTCCTTGTCATCATTGCA+AGG | + | chr5_4:16453703-16453722 | Msa0840610:intron | 40.0% | |
! | CATCATTGCAAGGTTGCTTT+AGG | + | chr5_4:16453713-16453732 | Msa0840610:intron | 40.0% |
TTTAGGTGGTGAACACTACA+TGG | + | chr5_4:16453730-16453749 | Msa0840610:intron | 40.0% | |
TCGTTTAAACACCTCATTGC+AGG | + | chr5_4:16453827-16453846 | Msa0840610:intron | 40.0% | |
TAATAAGCGCGACCTTAATG+TGG | + | chr5_4:16453946-16453965 | Msa0840610:intron | 40.0% | |
! | TTGAGGCTTTTGCTGACAAA+TGG | + | chr5_4:16454071-16454090 | Msa0840610:intron | 40.0% |
! | TGAGCTTTAACCTGCTGTTT+CGG | - | chr5_4:16454349-16454368 | None:intergenic | 40.0% |
!! | TGAATACCTTTGGGACTGAT+GGG | - | chr5_4:16454373-16454392 | None:intergenic | 40.0% |
!! | ATGAATACCTTTGGGACTGA+TGG | - | chr5_4:16454374-16454393 | None:intergenic | 40.0% |
ACTGCCTTTCCCAATAAACA+AGG | - | chr5_4:16454608-16454627 | None:intergenic | 40.0% | |
GAACATACGCCATTCATTAG+TGG | - | chr5_4:16454726-16454745 | None:intergenic | 40.0% | |
GGTTCTTCTACTGTTGCTAA+TGG | + | chr5_4:16454806-16454825 | Msa0840610:CDS | 40.0% | |
! | CTGTTGCTAATGGAGTTTTG+GGG | + | chr5_4:16454816-16454835 | Msa0840610:CDS | 40.0% |
! | TACAACACTGGTGGTTGATA+TGG | + | chr5_4:16454856-16454875 | Msa0840610:CDS | 40.0% |
GAATTCACTTCTGATGACTG+TGG | + | chr5_4:16455107-16455126 | Msa0840610:intron | 40.0% | |
CGGTGACAAGCAAAACAATT+TGG | - | chr5_4:16455205-16455224 | None:intergenic | 40.0% | |
! | CTTGTGGAGGATTTTATTGG+TGG | + | chr5_4:16455258-16455277 | Msa0840610:intron | 40.0% |
GTTGTTGTCATGTGACTGTA+AGG | + | chr5_4:16455304-16455323 | Msa0840610:intron | 40.0% | |
!! | TTTTACACGAGGTTGTTTCC+AGG | - | chr5_4:16455344-16455363 | None:intergenic | 40.0% |
CGTACAATACACCAAATGGT+GGG | + | chr5_4:16455378-16455397 | Msa0840610:intron | 40.0% | |
ACTATGCATGGGAATGTGTT+TGG | + | chr5_4:16455480-16455499 | Msa0840610:intron | 40.0% | |
CTATGCATGGGAATGTGTTT+GGG | + | chr5_4:16455481-16455500 | Msa0840610:intron | 40.0% | |
GTGCTTGACAAGTTCAAACA+TGG | + | chr5_4:16455533-16455552 | Msa0840610:intron | 40.0% | |
! | ATGGATCTGGATCCAGTTTT+GGG | - | chr5_4:16455728-16455747 | None:intergenic | 40.0% |
! | TTTTTCATCTCCTGGGATGT+AGG | + | chr5_4:16455822-16455841 | Msa0840610:three_prime_UTR | 40.0% |
AAACAATGAACCTACATCCC+AGG | - | chr5_4:16455835-16455854 | None:intergenic | 40.0% | |
GTTGTTCTCCGATTTCTCGT+CGG | - | chr5_4:16443453-16443472 | None:intergenic | 45.0% | |
GAGAAGAGGAATCTCTGCTT+CGG | - | chr5_4:16443643-16443662 | None:intergenic | 45.0% | |
! | TGAAATGGAAGTTTTGCCGC+CGG | - | chr5_4:16443675-16443694 | None:intergenic | 45.0% |
TACACGACTTTCGACGACAT+CGG | - | chr5_4:16443733-16443752 | None:intergenic | 45.0% | |
TCGTCGAAAGTCGTGTATGA+AGG | + | chr5_4:16443736-16443755 | Msa0840610:CDS | 45.0% | |
CGAAAGTCGTGTATGAAGGA+TGG | + | chr5_4:16443740-16443759 | Msa0840610:CDS | 45.0% | |
AGTCGTGTATGAAGGATGGA+TGG | + | chr5_4:16443744-16443763 | Msa0840610:CDS | 45.0% | |
GAAGGATGGATGGTGAGATA+TGG | + | chr5_4:16443754-16443773 | Msa0840610:CDS | 45.0% | |
AGATATGGCCGGCGAAAAAT+CGG | + | chr5_4:16443769-16443788 | Msa0840610:CDS | 45.0% | |
!!! | GGTACTTCGTTTTGGAGTCA+CGG | + | chr5_4:16443812-16443831 | Msa0840610:CDS | 45.0% |
TGATGGAAACTGTAGAGTGG+AGG | + | chr5_4:16444215-16444234 | Msa0840610:CDS | 45.0% | |
AACTGTAGAGTGGAGGATAG+AGG | + | chr5_4:16444222-16444241 | Msa0840610:CDS | 45.0% | |
AGAGGATTGAAGACGCATCA+TGG | + | chr5_4:16444240-16444259 | Msa0840610:CDS | 45.0% | |
TGATATAAGCTGACCCCACT+CGG | + | chr5_4:16444415-16444434 | Msa0840610:intron | 45.0% | |
! | GTATCTAGAGTAGCCCTGTT+AGG | + | chr5_4:16444509-16444528 | Msa0840610:intron | 45.0% |
GCCGCCATCCTTCATAAAAT+TGG | - | chr5_4:16444677-16444696 | None:intergenic | 45.0% | |
! | CGGTAGTATGCCGGATTTTT+GGG | + | chr5_4:16444717-16444736 | Msa0840610:CDS | 45.0% |
!!! | GGATTTTTGGGTTTCCAGCA+TGG | + | chr5_4:16444729-16444748 | Msa0840610:CDS | 45.0% |
ATTTGAATCAGTGTTGCCGG+TGG | - | chr5_4:16444759-16444778 | None:intergenic | 45.0% | |
! | TCACCCTATTGTGTGCCATT+AGG | + | chr5_4:16444887-16444906 | Msa0840610:intron | 45.0% |
! | TCTCACGTTTGCTACAAGAC+AGG | - | chr5_4:16445181-16445200 | None:intergenic | 45.0% |
TTGCTTGTGGACTTGAAGCT+TGG | - | chr5_4:16445351-16445370 | None:intergenic | 45.0% | |
GTGCCTACTCCAAATATAGC+TGG | + | chr5_4:16445371-16445390 | Msa0840610:intron | 45.0% | |
! | CGTCCAGCTATATTTGGAGT+AGG | - | chr5_4:16445377-16445396 | None:intergenic | 45.0% |
TTGCTCAGCTTGCAGAGTTT+GGG | - | chr5_4:16445539-16445558 | None:intergenic | 45.0% | |
ATCAACTCACCATAACCCGA+TGG | - | chr5_4:16446138-16446157 | None:intergenic | 45.0% | |
!!! | GGCTGCTTTTAACATCCAAG+AGG | + | chr5_4:16446275-16446294 | Msa0840610:CDS | 45.0% |
ACATCCAAGAGGCCCTAATT+TGG | + | chr5_4:16446286-16446305 | Msa0840610:CDS | 45.0% | |
GCGAGAAGACTATCTTAAGG+AGG | - | chr5_4:16446849-16446868 | None:intergenic | 45.0% | |
GCATTCCTTTGTCCATTCTC+TGG | + | chr5_4:16446867-16446886 | Msa0840610:intron | 45.0% | |
CATCTCCAGAGAATGGACAA+AGG | - | chr5_4:16446875-16446894 | None:intergenic | 45.0% | |
ACAGTGCAACAAAAGAGCGA+AGG | - | chr5_4:16446943-16446962 | None:intergenic | 45.0% | |
TTGCAAACCCACAAGCAGAA+AGG | - | chr5_4:16447150-16447169 | None:intergenic | 45.0% | |
ATCGCTCTACTATAGCTCCT+TGG | - | chr5_4:16447574-16447593 | None:intergenic | 45.0% | |
GAGCTATAGTAGAGCGATGA+AGG | + | chr5_4:16447576-16447595 | Msa0840610:CDS | 45.0% | |
AGCTTGTGATGAGCATGGAT+GGG | + | chr5_4:16447638-16447657 | Msa0840610:CDS | 45.0% | |
TGACTAGGTTGTCCAAGACT+AGG | - | chr5_4:16447876-16447895 | None:intergenic | 45.0% | |
!! | AGATAGTGGAACTACCCCTA+TGG | - | chr5_4:16447964-16447983 | None:intergenic | 45.0% |
! | CAAAAGCACAGCCATCTGAT+AGG | + | chr5_4:16448006-16448025 | Msa0840610:intron | 45.0% |
! | TGGGAGAGGATCTTGTTGTA+AGG | + | chr5_4:16448157-16448176 | Msa0840610:intron | 45.0% |
! | GGGAGAGGATCTTGTTGTAA+GGG | + | chr5_4:16448158-16448177 | Msa0840610:intron | 45.0% |
! | GGAGAGGATCTTGTTGTAAG+GGG | + | chr5_4:16448159-16448178 | Msa0840610:intron | 45.0% |
CTCTAACTACTCCCGTTATC+AGG | - | chr5_4:16448193-16448212 | None:intergenic | 45.0% | |
!! | CTGATAACGGGAGTAGTTAG+AGG | + | chr5_4:16448191-16448210 | Msa0840610:intron | 45.0% |
TAACGGGAGTAGTTAGAGGT+AGG | + | chr5_4:16448195-16448214 | Msa0840610:intron | 45.0% | |
TTAGGCATTCTCTAACTGCC+TGG | + | chr5_4:16448247-16448266 | Msa0840610:intron | 45.0% | |
TAGGCATTCTCTAACTGCCT+GGG | + | chr5_4:16448248-16448267 | Msa0840610:intron | 45.0% | |
ATGTCAAGTCTTGGGCAAGA+GGG | - | chr5_4:16448662-16448681 | None:intergenic | 45.0% | |
AGCTCCAGATGTCAAGTCTT+GGG | - | chr5_4:16448670-16448689 | None:intergenic | 45.0% | |
AAGCTCCAGATGTCAAGTCT+TGG | - | chr5_4:16448671-16448690 | None:intergenic | 45.0% | |
ATTGCAGTTTCCAGGAAGGT+AGG | + | chr5_4:16448957-16448976 | Msa0840610:CDS | 45.0% | |
!! | TCTTTATCACCGACTTCAGC+TGG | + | chr5_4:16449012-16449031 | Msa0840610:CDS | 45.0% |
TGTCATGTGTTCATTGTGGC+AGG | + | chr5_4:16449341-16449360 | Msa0840610:intron | 45.0% | |
TTCATTGTGGCAGGTTTGTG+TGG | + | chr5_4:16449350-16449369 | Msa0840610:intron | 45.0% | |
! | TACTGGCGTCGAAATGATGA+TGG | + | chr5_4:16449397-16449416 | Msa0840610:CDS | 45.0% |
ATAACTGTGGTCCACAACCA+GGG | + | chr5_4:16449729-16449748 | Msa0840610:CDS | 45.0% | |
TCCCCCTTAAAACCTCGAAA+TGG | + | chr5_4:16450589-16450608 | Msa0840610:CDS | 45.0% | |
!!! | CCCATTTCGAGGTTTTAAGG+GGG | - | chr5_4:16450593-16450612 | None:intergenic | 45.0% |
CCCCCTTAAAACCTCGAAAT+GGG | + | chr5_4:16450590-16450609 | Msa0840610:CDS | 45.0% | |
! | CCTCCCATTTCGAGGTTTTA+AGG | - | chr5_4:16450596-16450615 | None:intergenic | 45.0% |
CCTTAAAACCTCGAAATGGG+AGG | + | chr5_4:16450593-16450612 | Msa0840610:CDS | 45.0% | |
AGATGCTGAACTTGTGTCCT+GGG | - | chr5_4:16450619-16450638 | None:intergenic | 45.0% | |
AAGATGCTGAACTTGTGTCC+TGG | - | chr5_4:16450620-16450639 | None:intergenic | 45.0% | |
TGCAGATTGATCTGAAGGGT+TGG | + | chr5_4:16450641-16450660 | Msa0840610:CDS | 45.0% | |
GCAGATTGATCTGAAGGGTT+GGG | + | chr5_4:16450642-16450661 | Msa0840610:CDS | 45.0% | |
CAGATTGATCTGAAGGGTTG+GGG | + | chr5_4:16450643-16450662 | Msa0840610:CDS | 45.0% | |
AGACAATGCTGCTGGAAAGA+CGG | - | chr5_4:16450682-16450701 | None:intergenic | 45.0% | |
GTACGTGTGTGTGTAAAGAG+AGG | - | chr5_4:16450813-16450832 | None:intergenic | 45.0% | |
GAGCATTCCTTTCATCTGAC+TGG | - | chr5_4:16450976-16450995 | None:intergenic | 45.0% | |
TCGGCGTAAATTACCCGAAA+AGG | - | chr5_4:16451510-16451529 | None:intergenic | 45.0% | |
GCCTTCACAGTTCACCATAA+AGG | - | chr5_4:16451689-16451708 | None:intergenic | 45.0% | |
!! | TGTTGCGGTTGACTGGTTTA+AGG | + | chr5_4:16451736-16451755 | Msa0840610:CDS | 45.0% |
! | GAAGGTTAGTTACAGTGACC+TGG | + | chr5_4:16451975-16451994 | Msa0840610:intron | 45.0% |
CATAGACTAAGCAGTATCGC+TGG | + | chr5_4:16452019-16452038 | Msa0840610:intron | 45.0% | |
GAGAGGAACTGGTAGAGAAA+AGG | + | chr5_4:16452195-16452214 | Msa0840610:intron | 45.0% | |
! | ACGGTACTCAGCTTTTGTAC+TGG | + | chr5_4:16452282-16452301 | Msa0840610:intron | 45.0% |
GAGGTTGAATGCCTATCATC+TGG | + | chr5_4:16452376-16452395 | Msa0840610:intron | 45.0% | |
! | AACGGTTGATGCAGAGAAAC+TGG | + | chr5_4:16452439-16452458 | Msa0840610:intron | 45.0% |
CAGAGAAACTGGTTGAAACG+AGG | + | chr5_4:16452450-16452469 | Msa0840610:intron | 45.0% | |
!! | CTAAGAGGCACTCTGCATTA+TGG | - | chr5_4:16452476-16452495 | None:intergenic | 45.0% |
GCTTACAACTGAGGTTCAAG+AGG | + | chr5_4:16452518-16452537 | Msa0840610:intron | 45.0% | |
TGCTTCTCACTATAGGTCAG+TGG | - | chr5_4:16452624-16452643 | None:intergenic | 45.0% | |
GAGACCATAGGAGTTGTAAC+TGG | + | chr5_4:16452661-16452680 | Msa0840610:intron | 45.0% | |
CAACCCAGTTACAACTCCTA+TGG | - | chr5_4:16452668-16452687 | None:intergenic | 45.0% | |
CATAGGAGTTGTAACTGGGT+TGG | + | chr5_4:16452666-16452685 | Msa0840610:intron | 45.0% | |
GGCATCACTCATATCAGTTC+TGG | + | chr5_4:16452687-16452706 | Msa0840610:intron | 45.0% | |
!! | CACTCATATCAGTTCTGGAG+AGG | + | chr5_4:16452692-16452711 | Msa0840610:intron | 45.0% |
TCTCACTATAGGTCAGTGGT+TGG | - | chr5_4:16452620-16452639 | None:intergenic | 45.0% | |
CAGTTCTCACTATAGGTCAG+TGG | - | chr5_4:16452771-16452790 | None:intergenic | 45.0% | |
GCATCAGCAAAAGACAAACC+CGG | + | chr5_4:16452795-16452814 | Msa0840610:intron | 45.0% | |
TAGAATAGAGACCACAGGAG+TGG | + | chr5_4:16452836-16452855 | Msa0840610:intron | 45.0% | |
TGTGTCACCTTGATGTGTCT+AGG | + | chr5_4:16453087-16453106 | Msa0840610:intron | 45.0% | |
TGTTACAGCTGTCCAATCCT+AGG | + | chr5_4:16453370-16453389 | Msa0840610:intron | 45.0% | |
CTGTCCAATCCTAGGATTGA+GGG | + | chr5_4:16453378-16453397 | Msa0840610:intron | 45.0% | |
!!! | AGGGCACATCCTCACTTTTT+TGG | + | chr5_4:16453532-16453551 | Msa0840610:intron | 45.0% |
GCAACCTTGCAATGATGACA+AGG | - | chr5_4:16453710-16453729 | None:intergenic | 45.0% | |
! | CATTGCAAGGTTGCTTTAGG+TGG | + | chr5_4:16453716-16453735 | Msa0840610:intron | 45.0% |
! | GAGGTGTTTAAACGACATGC+TGG | - | chr5_4:16453822-16453841 | None:intergenic | 45.0% |
! | GTGTTTCTATCACAGATGGG+TGG | - | chr5_4:16453877-16453896 | None:intergenic | 45.0% |
ATGCAGGTTGCGTCTGAAAA+AGG | + | chr5_4:16454114-16454133 | Msa0840610:intron | 45.0% | |
TGTTCCAGGAACTAACTCCT+TGG | - | chr5_4:16454291-16454310 | None:intergenic | 45.0% | |
! | CTCTTGCAACGCTTTGTTGA+TGG | + | chr5_4:16454311-16454330 | Msa0840610:CDS | 45.0% |
ATGACGAATTCCGAAACAGC+AGG | + | chr5_4:16454336-16454355 | Msa0840610:CDS | 45.0% | |
CGAAGCTTCCCACTAATGAA+TGG | + | chr5_4:16454714-16454733 | Msa0840610:intron | 45.0% | |
!!! | GGAGTTTTGGGGCTTGTTAT+TGG | + | chr5_4:16454827-16454846 | Msa0840610:CDS | 45.0% |
TGGTGTGATTACAACACTGG+TGG | + | chr5_4:16454847-16454866 | Msa0840610:CDS | 45.0% | |
TGAACGTCTAAGCAAGTCGT+AGG | + | chr5_4:16454930-16454949 | Msa0840610:intron | 45.0% | |
GTCATGTGACTGTAAGGTCA+CGG | + | chr5_4:16455310-16455329 | Msa0840610:intron | 45.0% | |
TCATGTGACTGTAAGGTCAC+GGG | + | chr5_4:16455311-16455330 | Msa0840610:intron | 45.0% | |
!!! | CCTTACCCTGTTTTTACACG+AGG | - | chr5_4:16455355-16455374 | None:intergenic | 45.0% |
CCTCGTGTAAAAACAGGGTA+AGG | + | chr5_4:16455352-16455371 | Msa0840610:intron | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr5_4:16455374-16455393 | Msa0840610:intron | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr5_4:16455377-16455396 | Msa0840610:intron | 45.0% | |
AACAGCTCCAATAAGCCTCT+CGG | - | chr5_4:16455670-16455689 | None:intergenic | 45.0% | |
! | GATGGATCTGGATCCAGTTT+TGG | - | chr5_4:16455729-16455748 | None:intergenic | 45.0% |
! | GTTCAGGTTCAAGCTGGTAT+AGG | + | chr5_4:16455935-16455954 | Msa0840610:three_prime_UTR | 45.0% |
!! | TATTATATTATATTAAAACT+AGG | - | chr5_4:16451344-16451363 | None:intergenic | 5.0% |
!! | TTAAAATTATTCATAAAAAT+TGG | + | chr5_4:16453613-16453632 | Msa0840610:intron | 5.0% |
!! | ATAAATTATAAATAGTATAA+GGG | - | chr5_4:16453984-16454003 | None:intergenic | 5.0% |
!! | AATAAATTATAAATAGTATA+AGG | - | chr5_4:16453985-16454004 | None:intergenic | 5.0% |
!! | TACAATAAAAAAAAAAAAAA+GGG | - | chr5_4:16455452-16455471 | None:intergenic | 5.0% |
! | ATCGGTGACGGCGATTAGAT+CGG | - | chr5_4:16443415-16443434 | None:intergenic | 50.0% |
TCTCGTCGGAGTTTATTCGC+CGG | - | chr5_4:16443439-16443458 | None:intergenic | 50.0% | |
GAGCTGGAAGATCATGGAAC+TGG | - | chr5_4:16443572-16443591 | None:intergenic | 50.0% | |
GTTCCATGATCTTCCAGCTC+TGG | + | chr5_4:16443572-16443591 | Msa0840610:five_prime_UTR | 50.0% | |
GATGGATGGTGAGATATGGC+CGG | + | chr5_4:16443758-16443777 | Msa0840610:CDS | 50.0% | |
!! | ACGATCGACCGATTTTTCGC+CGG | - | chr5_4:16443780-16443799 | None:intergenic | 50.0% |
GGAGTGAGGTGATGTCAACA+TGG | + | chr5_4:16444570-16444589 | Msa0840610:intron | 50.0% | |
TATCCGTCATGGCAGTGTCA+TGG | + | chr5_4:16444651-16444670 | Msa0840610:CDS | 50.0% | |
!! | ATATGGTGGCGGTAGTATGC+CGG | + | chr5_4:16444708-16444727 | Msa0840610:CDS | 50.0% |
! | GCGGTAGTATGCCGGATTTT+TGG | + | chr5_4:16444716-16444735 | Msa0840610:CDS | 50.0% |
TTGGAGTAGGCACTTGCTTG+TGG | - | chr5_4:16445364-16445383 | None:intergenic | 50.0% | |
GTTGCTCAGCTTGCAGAGTT+TGG | - | chr5_4:16445540-16445559 | None:intergenic | 50.0% | |
CCTTCCAAATTAGGGCCTCT+TGG | - | chr5_4:16446293-16446312 | None:intergenic | 50.0% | |
CCAAGAGGCCCTAATTTGGA+AGG | + | chr5_4:16446290-16446309 | Msa0840610:CDS | 50.0% | |
TGGGATGGACAATGGGAAGA+CGG | + | chr5_4:16446685-16446704 | Msa0840610:CDS | 50.0% | |
!! | TTACTGGCTTTCACGATCCG+AGG | - | chr5_4:16446717-16446736 | None:intergenic | 50.0% |
GCAGTTGCATCTCCAGAGAA+TGG | - | chr5_4:16446882-16446901 | None:intergenic | 50.0% | |
TCCTCCTGAGCACTAAACCT+GGG | - | chr5_4:16447061-16447080 | None:intergenic | 50.0% | |
ATCCTCCTGAGCACTAAACC+TGG | - | chr5_4:16447062-16447081 | None:intergenic | 50.0% | |
GAAGTCCTGTCGATGTCAGA+AGG | - | chr5_4:16447423-16447442 | None:intergenic | 50.0% | |
TAGTAGAGCGATGAAGGCAG+TGG | + | chr5_4:16447582-16447601 | Msa0840610:CDS | 50.0% | |
AGTAGAGCGATGAAGGCAGT+GGG | + | chr5_4:16447583-16447602 | Msa0840610:CDS | 50.0% | |
GAGCTTGTGATGAGCATGGA+TGG | + | chr5_4:16447637-16447656 | Msa0840610:CDS | 50.0% | |
TGATGAGCATGGATGGGACA+CGG | + | chr5_4:16447644-16447663 | Msa0840610:CDS | 50.0% | |
ATTGGCAAAAGGAGTGGGAG+AGG | + | chr5_4:16448143-16448162 | Msa0840610:intron | 50.0% | |
GGAGTAGTTAGAGGTAGGCT+AGG | + | chr5_4:16448200-16448219 | Msa0840610:intron | 50.0% | |
! | GAGTTCTAATACCGGTGGAC+AGG | - | chr5_4:16448409-16448428 | None:intergenic | 50.0% |
GGATACTGCATGAGCTGCAA+TGG | + | chr5_4:16448450-16448469 | Msa0840610:intron | 50.0% | |
TGTCAAGTCTTGGGCAAGAG+GGG | - | chr5_4:16448661-16448680 | None:intergenic | 50.0% | |
GATGTCAAGTCTTGGGCAAG+AGG | - | chr5_4:16448663-16448682 | None:intergenic | 50.0% | |
CTTGCCCAAGACTTGACATC+TGG | + | chr5_4:16448663-16448682 | Msa0840610:intron | 50.0% | |
CAGATGGGATTGCAGTTTCC+AGG | + | chr5_4:16448949-16448968 | Msa0840610:intron | 50.0% | |
TGGGATTGCAGTTTCCAGGA+AGG | + | chr5_4:16448953-16448972 | Msa0840610:CDS | 50.0% | |
CCTCAACTAACCTACCTTCC+TGG | - | chr5_4:16448970-16448989 | None:intergenic | 50.0% | |
! | CCAGGAAGGTAGGTTAGTTG+AGG | + | chr5_4:16448967-16448986 | Msa0840610:CDS | 50.0% |
! | GGAAGGTAGGTTAGTTGAGG+AGG | + | chr5_4:16448970-16448989 | Msa0840610:CDS | 50.0% |
! | AGGTAGGTTAGTTGAGGAGG+TGG | + | chr5_4:16448973-16448992 | Msa0840610:CDS | 50.0% |
! | AGGTTAGTTGAGGAGGTGGA+TGG | + | chr5_4:16448977-16448996 | Msa0840610:CDS | 50.0% |
! | GGTTAGTTGAGGAGGTGGAT+GGG | + | chr5_4:16448978-16448997 | Msa0840610:CDS | 50.0% |
TTCAGTTTATGCGACGGCAC+TGG | + | chr5_4:16449459-16449478 | Msa0840610:intron | 50.0% | |
GATAACTGTGGTCCACAACC+AGG | + | chr5_4:16449728-16449747 | Msa0840610:CDS | 50.0% | |
!!! | GGCGTTGGCTCTTTTGACTT+TGG | + | chr5_4:16449911-16449930 | Msa0840610:intron | 50.0% |
CTTTGGTAGACTGAGCAGCT+TGG | + | chr5_4:16449928-16449947 | Msa0840610:intron | 50.0% | |
GGTTTGCCCAGTCAGATGAA+AGG | + | chr5_4:16450966-16450985 | Msa0840610:CDS | 50.0% | |
TCCTCCACGAATTCCTGTCA+TGG | + | chr5_4:16450994-16451013 | Msa0840610:CDS | 50.0% | |
ACCATGACAGGAATTCGTGG+AGG | - | chr5_4:16450998-16451017 | None:intergenic | 50.0% | |
ATCATCGGGCTCTTCATCCA+AGG | - | chr5_4:16451471-16451490 | None:intergenic | 50.0% | |
! | GTGATAATGCTCGGGATTGC+TGG | + | chr5_4:16451537-16451556 | Msa0840610:CDS | 50.0% |
TGGATCTTGTTGCGGTTGAC+TGG | + | chr5_4:16451729-16451748 | Msa0840610:CDS | 50.0% | |
ACAGTCCCATTGAGCTTGAG+GGG | - | chr5_4:16452116-16452135 | None:intergenic | 50.0% | |
CACAGTCCCATTGAGCTTGA+GGG | - | chr5_4:16452117-16452136 | None:intergenic | 50.0% | |
TTAGCTGAGGAGAGAGGAAC+TGG | + | chr5_4:16452184-16452203 | Msa0840610:intron | 50.0% | |
TGCGAGACCACCAAGATATG+AGG | + | chr5_4:16452326-16452345 | Msa0840610:intron | 50.0% | |
GCGCTAACCTCATATCTTGG+TGG | - | chr5_4:16452336-16452355 | None:intergenic | 50.0% | |
TGGGCGCTAACCTCATATCT+TGG | - | chr5_4:16452339-16452358 | None:intergenic | 50.0% | |
AGACCACAGGAGTGGTAACT+GGG | + | chr5_4:16452844-16452863 | Msa0840610:intron | 50.0% | |
AAATGACTCAGCTGTCTGCC+AGG | + | chr5_4:16453154-16453173 | Msa0840610:intron | 50.0% | |
GCTGTCCAATCCTAGGATTG+AGG | + | chr5_4:16453377-16453396 | Msa0840610:intron | 50.0% | |
CACACCCTCAATCCTAGGAT+TGG | - | chr5_4:16453385-16453404 | None:intergenic | 50.0% | |
CTCAACACACCCTCAATCCT+AGG | - | chr5_4:16453390-16453409 | None:intergenic | 50.0% | |
AGTGTGTTAGGCAGGCTGAA+AGG | - | chr5_4:16453671-16453690 | None:intergenic | 50.0% | |
TGTGGGATAGTGTGTTAGGC+AGG | - | chr5_4:16453679-16453698 | None:intergenic | 50.0% | |
TGCCTAACACACTATCCCAC+AGG | + | chr5_4:16453678-16453697 | Msa0840610:intron | 50.0% | |
GCCTAACACACTATCCCACA+GGG | + | chr5_4:16453679-16453698 | Msa0840610:intron | 50.0% | |
ATGACAAGGAGAAGCCCTGT+GGG | - | chr5_4:16453696-16453715 | None:intergenic | 50.0% | |
CTATGTCTTGGCCTGCAATG+AGG | - | chr5_4:16453841-16453860 | None:intergenic | 50.0% | |
TTCTATCACAGATGGGTGGC+CGG | - | chr5_4:16453873-16453892 | None:intergenic | 50.0% | |
AATGTGTGTTGTGTGGCTGC+AGG | + | chr5_4:16454223-16454242 | Msa0840610:intron | 50.0% | |
GTGACCAAGGAGTTAGTTCC+TGG | + | chr5_4:16454284-16454303 | Msa0840610:CDS | 50.0% | |
!! | AAGCGTTGCAAGAGTGTTCC+AGG | - | chr5_4:16454305-16454324 | None:intergenic | 50.0% |
ACAGCTCCAATAAGCCTCTC+GGG | - | chr5_4:16455669-16455688 | None:intergenic | 50.0% | |
AACTGCGGTAGACCCAAAAC+TGG | + | chr5_4:16455713-16455732 | Msa0840610:CDS | 50.0% | |
TTATTCGCCGGGATCGGTGA+CGG | - | chr5_4:16443427-16443446 | None:intergenic | 55.0% | |
CGGAGTTTATTCGCCGGGAT+CGG | - | chr5_4:16443433-16443452 | None:intergenic | 55.0% | |
CTCGTCGGAGTTTATTCGCC+GGG | - | chr5_4:16443438-16443457 | None:intergenic | 55.0% | |
GTGCCAGAGCTGGAAGATCA+TGG | - | chr5_4:16443578-16443597 | None:intergenic | 55.0% | |
! | TGATCTTCCAGCTCTGGCAC+CGG | + | chr5_4:16443578-16443597 | Msa0840610:five_prime_UTR | 55.0% |
TCTGCTTCGGCGAGATCGAT+TGG | - | chr5_4:16443630-16443649 | None:intergenic | 55.0% | |
! | AATGGAAGTTTTGCCGCCGG+CGG | - | chr5_4:16443672-16443691 | None:intergenic | 55.0% |
TATAAGCTGACCCCACTCGG+TGG | + | chr5_4:16444418-16444437 | Msa0840610:intron | 55.0% | |
ATAAGCTGACCCCACTCGGT+GGG | + | chr5_4:16444419-16444438 | Msa0840610:intron | 55.0% | |
AAACCCTATCCCACCGAGTG+GGG | - | chr5_4:16444431-16444450 | None:intergenic | 55.0% | |
CAAACCCTATCCCACCGAGT+GGG | - | chr5_4:16444432-16444451 | None:intergenic | 55.0% | |
TCAAACCCTATCCCACCGAG+TGG | - | chr5_4:16444433-16444452 | None:intergenic | 55.0% | |
TGGCCATGACACTGCCATGA+CGG | - | chr5_4:16444657-16444676 | None:intergenic | 55.0% | |
TTTCCAGCATGGTCTGCCAC+CGG | + | chr5_4:16444740-16444759 | Msa0840610:intron | 55.0% | |
CAGGGTGCACAACCGTCAAA+TGG | + | chr5_4:16446632-16446651 | Msa0840610:CDS | 55.0% | |
TGGGAAGACGGCTTCTTCCT+CGG | + | chr5_4:16446697-16446716 | Msa0840610:CDS | 55.0% | |
GATCCCCAGGTTTAGTGCTC+AGG | + | chr5_4:16447054-16447073 | Msa0840610:intron | 55.0% | |
CCTCCTGAGCACTAAACCTG+GGG | - | chr5_4:16447060-16447079 | None:intergenic | 55.0% | |
TTTATGAGCTGCAGGGCCTC+CGG | + | chr5_4:16447204-16447223 | Msa0840610:intron | 55.0% | |
GATGAAGGCAGTGGGAGTTG+TGG | + | chr5_4:16447591-16447610 | Msa0840610:CDS | 55.0% | |
CACAGCCATCTGATAGGACG+TGG | + | chr5_4:16448012-16448031 | Msa0840610:intron | 55.0% | |
TGACCCGCGTTGCCGAATAA+TGG | + | chr5_4:16448690-16448709 | Msa0840610:intron | 55.0% | |
GACCCGCGTTGCCGAATAAT+GGG | + | chr5_4:16448691-16448710 | Msa0840610:intron | 55.0% | |
CACCCATTATTCGGCAACGC+GGG | - | chr5_4:16448696-16448715 | None:intergenic | 55.0% | |
CCACCCATTATTCGGCAACG+CGG | - | chr5_4:16448697-16448716 | None:intergenic | 55.0% | |
!! | ATCACCGACTTCAGCTGGAC+TGG | + | chr5_4:16449017-16449036 | Msa0840610:CDS | 55.0% |
GGAACCAGTCCAGCTGAAGT+CGG | - | chr5_4:16449024-16449043 | None:intergenic | 55.0% | |
!! | CGACGGCACTGGTTTAGAAC+TGG | + | chr5_4:16449470-16449489 | Msa0840610:intron | 55.0% |
GTCCACAACCAGGGTGTGTT+CGG | + | chr5_4:16449738-16449757 | Msa0840610:CDS | 55.0% | |
TCCACAACCAGGGTGTGTTC+GGG | + | chr5_4:16449739-16449758 | Msa0840610:CDS | 55.0% | |
ATATGTGCCCGAACACACCC+TGG | - | chr5_4:16449749-16449768 | None:intergenic | 55.0% | |
TTTGGCGGAGACAATGCTGC+TGG | - | chr5_4:16450690-16450709 | None:intergenic | 55.0% | |
GCGATGCAAGCACATGACCT+AGG | + | chr5_4:16451406-16451425 | Msa0840610:intron | 55.0% | |
TGAACTGTGAAGGCTCCTGC+AGG | + | chr5_4:16451695-16451714 | Msa0840610:intron | 55.0% | |
AACCAGGACGCTTAGCCACA+TGG | - | chr5_4:16451778-16451797 | None:intergenic | 55.0% | |
CTCACTTGTGCTGCACAACC+AGG | - | chr5_4:16451794-16451813 | None:intergenic | 55.0% | |
ACACTCCCCCTCAAGCTCAA+TGG | + | chr5_4:16452107-16452126 | Msa0840610:intron | 55.0% | |
CACTCCCCCTCAAGCTCAAT+GGG | + | chr5_4:16452108-16452127 | Msa0840610:intron | 55.0% | |
CAGTCCCATTGAGCTTGAGG+GGG | - | chr5_4:16452115-16452134 | None:intergenic | 55.0% | |
GCACAGTCCCATTGAGCTTG+AGG | - | chr5_4:16452118-16452137 | None:intergenic | 55.0% | |
GTCTCGCAAGCAAACTGTGG+TGG | - | chr5_4:16452314-16452333 | None:intergenic | 55.0% | |
GTGGTCTCGCAAGCAAACTG+TGG | - | chr5_4:16452317-16452336 | None:intergenic | 55.0% | |
GAGACCACAGGAGTGGTAAC+TGG | + | chr5_4:16452843-16452862 | Msa0840610:intron | 55.0% | |
CAACCCAGTTACCACTCCTG+TGG | - | chr5_4:16452850-16452869 | None:intergenic | 55.0% | |
CACAGGAGTGGTAACTGGGT+TGG | + | chr5_4:16452848-16452867 | Msa0840610:intron | 55.0% | |
GCCCTGTGGGATAGTGTGTT+AGG | - | chr5_4:16453683-16453702 | None:intergenic | 55.0% | |
GATGACAAGGAGAAGCCCTG+TGG | - | chr5_4:16453697-16453716 | None:intergenic | 55.0% | |
CAAGACATAGCTCACCCACC+CGG | + | chr5_4:16453851-16453870 | Msa0840610:intron | 55.0% | |
TCTATCACAGATGGGTGGCC+GGG | - | chr5_4:16453872-16453891 | None:intergenic | 55.0% | |
GCTCATCCCATCAGTCCCAA+AGG | + | chr5_4:16454364-16454383 | Msa0840610:CDS | 55.0% | |
TGCTTGTCACCGCATGTGCT+AGG | + | chr5_4:16455213-16455232 | Msa0840610:intron | 55.0% | |
AAGGTCACGGGTTCAAGTCC+TGG | + | chr5_4:16455323-16455342 | Msa0840610:intron | 55.0% | |
GAGTTGCCCGAGAGGCTTAT+TGG | + | chr5_4:16455660-16455679 | Msa0840610:CDS | 55.0% | |
CTAATCGCCGTCACCGATCC+CGG | + | chr5_4:16443417-16443436 | Msa0840610:five_prime_UTR | 60.0% | |
TCCTCTTCTCCTGCTTCCGC+CGG | + | chr5_4:16443653-16443672 | Msa0840610:five_prime_UTR | 60.0% | |
! | TGACCCCACTCGGTGGGATA+GGG | + | chr5_4:16444425-16444444 | Msa0840610:intron | 60.0% |
GCCACACTCGGATATGGTGG+CGG | + | chr5_4:16444697-16444716 | Msa0840610:CDS | 60.0% | |
ACCGCCACCATATCCGAGTG+TGG | - | chr5_4:16444701-16444720 | None:intergenic | 60.0% | |
CCCCAGGTTTAGTGCTCAGG+AGG | + | chr5_4:16447057-16447076 | Msa0840610:intron | 60.0% | |
GAAGGCAGTGGGAGTTGTGG+AGG | + | chr5_4:16447594-16447613 | Msa0840610:CDS | 60.0% | |
! | CCGCGTTGCCGAATAATGGG+TGG | + | chr5_4:16448694-16448713 | Msa0840610:intron | 60.0% |
TGGGGTGCAGGGGTGATCAT+AGG | + | chr5_4:16450284-16450303 | Msa0840610:intron | 60.0% | |
AACCTCGAAATGGGAGGCCC+AGG | + | chr5_4:16450599-16450618 | Msa0840610:CDS | 60.0% | |
GACCATGTGGCTAAGCGTCC+TGG | + | chr5_4:16451773-16451792 | Msa0840610:CDS | 60.0% | |
ACAGTGACCTGGCAGACAGC+TGG | + | chr5_4:16451986-16452005 | Msa0840610:intron | 60.0% | |
GTTGTTGCCAGCTGTCTGCC+AGG | - | chr5_4:16451996-16452015 | None:intergenic | 60.0% | |
GGCAGACAGCTGGCAACAAC+TGG | + | chr5_4:16451996-16452015 | Msa0840610:intron | 60.0% | |
GCAGACTCTGCTCACAGAGC+TGG | - | chr5_4:16452227-16452246 | None:intergenic | 60.0% | |
GGGCTGCTGACCCAGATGAT+AGG | - | chr5_4:16452390-16452409 | None:intergenic | 60.0% | |
CGGGTGGGTGAGCTATGTCT+TGG | - | chr5_4:16453853-16453872 | None:intergenic | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr5_4:16455390-16455409 | Msa0840610:intron | 60.0% |
CTGAAGCTCCCGCATACGCA+GGG | - | chr5_4:16455417-16455436 | None:intergenic | 60.0% | |
ACTGAAGCTCCCGCATACGC+AGG | - | chr5_4:16455418-16455437 | None:intergenic | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | + | chr5_4:16455422-16455441 | Msa0840610:intron | 60.0% | |
CTCCTGATGAGTTGCCCGAG+AGG | + | chr5_4:16455652-16455671 | Msa0840610:CDS | 60.0% | |
AGCCTCTCGGGCAACTCATC+AGG | - | chr5_4:16455657-16455676 | None:intergenic | 60.0% | |
TCTTCTCCTGCTTCCGCCGG+CGG | + | chr5_4:16443656-16443675 | Msa0840610:five_prime_UTR | 65.0% | |
! | CTGACCCCACTCGGTGGGAT+AGG | + | chr5_4:16444424-16444443 | Msa0840610:intron | 65.0% |
! | AAGGATGGCGGCGCCACACT+CGG | + | chr5_4:16444685-16444704 | Msa0840610:CDS | 65.0% |
GGCGCCACACTCGGATATGG+TGG | + | chr5_4:16444694-16444713 | Msa0840610:CDS | 65.0% | |
TTGCCGGTGGCAGACCATGC+TGG | - | chr5_4:16444746-16444765 | None:intergenic | 65.0% | |
! | GGGCAAGAGGGGTGTGCGTT+GGG | - | chr5_4:16448650-16448669 | None:intergenic | 65.0% |
! | TGGGCAAGAGGGGTGTGCGT+TGG | - | chr5_4:16448651-16448670 | None:intergenic | 65.0% |
GCCCGAACACACCCTGGTTG+TGG | - | chr5_4:16449743-16449762 | None:intergenic | 65.0% | |
GTCCTGGGCCTCCCATTTCG+AGG | - | chr5_4:16450604-16450623 | None:intergenic | 65.0% | |
TCACAGATGGGTGGCCGGGT+GGG | - | chr5_4:16453868-16453887 | None:intergenic | 65.0% | |
ATCACAGATGGGTGGCCGGG+TGG | - | chr5_4:16453869-16453888 | None:intergenic | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr5_4:16455392-16455411 | None:intergenic | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | - | chr5_4:16455405-16455424 | None:intergenic | 65.0% | |
GCATACGCAGGGTCCGGGAA+GGG | - | chr5_4:16455406-16455425 | None:intergenic | 65.0% | |
CTTCCCGGACCCTGCGTATG+CGG | + | chr5_4:16455405-16455424 | Msa0840610:intron | 65.0% | |
TTCCCGGACCCTGCGTATGC+GGG | + | chr5_4:16455406-16455425 | Msa0840610:intron | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | + | chr5_4:16455423-16455442 | Msa0840610:intron | 65.0% | |
! | CTCATCGCCGGTGCCAGAGC+TGG | - | chr5_4:16443588-16443607 | None:intergenic | 70.0% |
GCCGGCGGAAGCAGGAGAAG+AGG | - | chr5_4:16443657-16443676 | None:intergenic | 70.0% | |
! | GTTTTGCCGCCGGCGGAAGC+AGG | - | chr5_4:16443665-16443684 | None:intergenic | 70.0% |
GGCGGCGCCACACTCGGATA+TGG | + | chr5_4:16444691-16444710 | Msa0840610:CDS | 70.0% | |
CGCATACGCAGGGTCCGGGA+AGG | - | chr5_4:16455407-16455426 | None:intergenic | 70.0% | |
CTCCCGCATACGCAGGGTCC+GGG | - | chr5_4:16455411-16455430 | None:intergenic | 70.0% | |
GCTCCCGCATACGCAGGGTC+CGG | - | chr5_4:16455412-16455431 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 16443348 | 16456040 | 16443348 | ID=Msa0840610;Name=Msa0840610 |
chr5_4 | mRNA | 16443348 | 16456040 | 16443348 | ID=Msa0840610-mRNA-1;Parent=Msa0840610;Name=Msa0840610-mRNA-1;_AED=0.15;_eAED=0.15;_QI=385|0.75|0.85|0.95|1|1|21|285|746 |
chr5_4 | exon | 16443348 | 16443873 | 16443348 | ID=Msa0840610-mRNA-1:exon:7041;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16444192 | 16444340 | 16444192 | ID=Msa0840610-mRNA-1:exon:7042;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16444636 | 16444750 | 16444636 | ID=Msa0840610-mRNA-1:exon:7043;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16446094 | 16446147 | 16446094 | ID=Msa0840610-mRNA-1:exon:7044;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16446270 | 16446338 | 16446270 | ID=Msa0840610-mRNA-1:exon:7045;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16446629 | 16446732 | 16446629 | ID=Msa0840610-mRNA-1:exon:7046;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16447063 | 16447142 | 16447063 | ID=Msa0840610-mRNA-1:exon:7047;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16447218 | 16447334 | 16447218 | ID=Msa0840610-mRNA-1:exon:7048;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16447437 | 16447477 | 16447437 | ID=Msa0840610-mRNA-1:exon:7049;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16447571 | 16447671 | 16447571 | ID=Msa0840610-mRNA-1:exon:7050;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16448952 | 16449047 | 16448952 | ID=Msa0840610-mRNA-1:exon:7051;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16449363 | 16449427 | 16449363 | ID=Msa0840610-mRNA-1:exon:7052;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16449702 | 16449773 | 16449702 | ID=Msa0840610-mRNA-1:exon:7053;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16450572 | 16450727 | 16450572 | ID=Msa0840610-mRNA-1:exon:7054;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16450954 | 16451183 | 16450954 | ID=Msa0840610-mRNA-1:exon:7055;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16451285 | 16451324 | 16451285 | ID=Msa0840610-mRNA-1:exon:7056;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16451468 | 16451622 | 16451468 | ID=Msa0840610-mRNA-1:exon:7057;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16451707 | 16451808 | 16451707 | ID=Msa0840610-mRNA-1:exon:7058;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16454245 | 16454385 | 16454245 | ID=Msa0840610-mRNA-1:exon:7059;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16454791 | 16454892 | 16454791 | ID=Msa0840610-mRNA-1:exon:7060;Parent=Msa0840610-mRNA-1 |
chr5_4 | exon | 16455645 | 16456040 | 16455645 | ID=Msa0840610-mRNA-1:exon:7061;Parent=Msa0840610-mRNA-1 |
chr5_4 | five_prime_UTR | 16443348 | 16443732 | 16443348 | ID=Msa0840610-mRNA-1:five_prime_utr;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16443733 | 16443873 | 16443733 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16444192 | 16444340 | 16444192 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16444636 | 16444750 | 16444636 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16446094 | 16446147 | 16446094 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16446270 | 16446338 | 16446270 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16446629 | 16446732 | 16446629 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16447063 | 16447142 | 16447063 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16447218 | 16447334 | 16447218 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16447437 | 16447477 | 16447437 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16447571 | 16447671 | 16447571 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16448952 | 16449047 | 16448952 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16449363 | 16449427 | 16449363 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16449702 | 16449773 | 16449702 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16450572 | 16450727 | 16450572 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16450954 | 16451183 | 16450954 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16451285 | 16451324 | 16451285 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16451468 | 16451622 | 16451468 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16451707 | 16451808 | 16451707 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16454245 | 16454385 | 16454245 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16454791 | 16454892 | 16454791 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | CDS | 16455645 | 16455755 | 16455645 | ID=Msa0840610-mRNA-1:cds;Parent=Msa0840610-mRNA-1 |
chr5_4 | three_prime_UTR | 16455756 | 16456040 | 16455756 | ID=Msa0840610-mRNA-1:three_prime_utr;Parent=Msa0840610-mRNA-1 |
Gene Sequence |
Protein sequence |