AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0719590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0719590 MtrunA17_Chr5g0410341 83.113 379 61 1 10 388 371 746 0.0 653
Msa0719590 MtrunA17_Chr5g0410271 95.413 327 15 0 63 389 2 328 0.0 642
Msa0719590 MtrunA17_Chr5g0410201 94.529 329 18 0 61 389 1 329 0.0 637
Msa0719590 MtrunA17_Chr5g0410171 81.892 370 64 1 21 387 364 733 0.0 625
Msa0719590 MtrunA17_Chr5g0410461 59.375 384 139 5 17 385 81 462 4.55e-148 427
Msa0719590 MtrunA17_Chr6g0456141 58.101 358 143 4 35 388 30 384 4.38e-144 414
Msa0719590 MtrunA17_Chr5g0410371 68.581 296 87 2 94 385 1 294 2.21e-136 391
Msa0719590 MtrunA17_Chr6g0456101 57.143 336 140 3 47 381 402 734 1.98e-122 371
Msa0719590 MtrunA17_Chr6g0457101 51.823 384 175 5 9 388 311 688 1.29e-120 365
Msa0719590 MtrunA17_Chr5g0410191 84.896 192 29 0 197 388 2 193 1.38e-111 324
Msa0719590 MtrunA17_Chr5g0410581 50.287 348 165 3 48 389 453 798 4.49e-107 332
Msa0719590 MtrunA17_Chr5g0410181 88.148 135 16 0 255 389 1 135 2.58e-79 240
Msa0719590 MtrunA17_Chr2g0297701 38.592 355 190 8 38 387 240 571 1.47e-69 229
Msa0719590 MtrunA17_Chr5g0443001 39.766 342 200 4 50 389 268 605 2.25e-66 221
Msa0719590 MtrunA17_Chr2g0297491 37.798 336 200 4 56 385 45 377 3.02e-66 215
Msa0719590 MtrunA17_Chr5g0410541 53.333 210 87 5 182 386 13 216 1.13e-65 208
Msa0719590 MtrunA17_Chr5g0410451 50.000 202 96 1 190 386 34 235 2.81e-64 205
Msa0719590 MtrunA17_Chr2g0297481 36.765 340 198 7 58 389 145 475 1.86e-59 200
Msa0719590 MtrunA17_Chr2g0297681 36.937 333 202 4 58 384 358 688 5.66e-58 201
Msa0719590 MtrunA17_Chr3g0100741 36.250 320 198 4 51 368 264 579 8.47e-58 198
Msa0719590 MtrunA17_Chr2g0297691 36.873 339 196 7 58 385 360 691 3.19e-57 198
Msa0719590 MtrunA17_Chr3g0100301 47.959 196 95 1 186 381 209 397 2.94e-56 190
Msa0719590 MtrunA17_Chr2g0297711 33.913 345 220 5 46 385 185 526 2.58e-55 190
Msa0719590 MtrunA17_Chr2g0297651 36.228 334 204 4 58 385 360 690 8.01e-55 192
Msa0719590 MtrunA17_Chr3g0096941 33.030 330 211 5 54 377 268 593 6.62e-48 171
Msa0719590 MtrunA17_Chr3g0098481 32.476 311 203 4 81 385 22 331 2.03e-44 157
Msa0719590 MtrunA17_Chr5g0410511 42.564 195 107 1 197 386 2 196 8.80e-43 148
Msa0719590 MtrunA17_Chr2g0286601 34.812 293 180 4 76 367 371 653 9.23e-43 158
Msa0719590 MtrunA17_Chr3g0102001 32.899 307 183 5 93 386 440 736 5.50e-39 148
Msa0719590 MtrunA17_Chr2g0286551 32.686 309 200 6 76 381 351 654 8.25e-37 141
Msa0719590 MtrunA17_Chr5g0410501 49.315 146 71 2 52 196 145 288 5.94e-35 130
Msa0719590 MtrunA17_Chr3g0098301 29.316 307 210 4 81 381 88 393 8.70e-35 132
Msa0719590 MtrunA17_Chr2g0284501 32.237 304 195 5 87 388 362 656 6.67e-34 133
Msa0719590 MtrunA17_Chr2g0286561 37.209 172 101 1 196 367 14 178 3.94e-32 120
Msa0719590 MtrunA17_Chr2g0284541 31.788 302 198 3 78 379 337 630 1.93e-31 125
Msa0719590 MtrunA17_Chr5g0439061 33.000 300 192 6 95 389 438 733 1.26e-30 124
Msa0719590 MtrunA17_Chr3g0098531 30.638 235 158 3 153 383 48 281 7.03e-30 117
Msa0719590 MtrunA17_Chr5g0410551 52.336 107 48 2 94 199 1 105 2.31e-27 105
Msa0719590 MtrunA17_Chr5g0439081 34.973 183 116 2 197 378 16 196 5.14e-26 104
Msa0719590 MtrunA17_Chr1g0211541 31.395 258 161 6 93 339 218 470 2.08e-24 104
Msa0719590 MtrunA17_Chr5g0410441 46.296 108 52 3 109 212 1 106 5.23e-21 87.4
Msa0719590 MtrunA17_Chr5g0439051 34.637 179 114 3 212 389 35 211 8.26e-20 87.4
Msa0719590 MtrunA17_Chr1g0211511 28.571 224 152 4 85 306 8 225 1.47e-19 89.0
Msa0719590 MtrunA17_Chr3g0100921 43.089 123 69 1 246 367 2 124 1.90e-19 84.0
Msa0719590 MtrunA17_Chr1g0211531 30.263 228 145 5 85 306 231 450 2.39e-18 86.7
Msa0719590 MtrunA17_Chr2g0297521 43.529 85 47 1 189 273 1 84 1.40e-14 68.6
Msa0719590 MtrunA17_Chr2g0297611 39.759 83 49 1 211 293 9 90 5.18e-13 64.3
Msa0719590 MtrunA17_Chr6g0455841 28.230 209 119 8 113 319 6 185 5.65e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0719590 AT3G18670.1 42.857 336 185 5 53 385 252 583 2.62e-87 276
Msa0719590 AT3G18670.2 42.857 336 185 5 53 385 307 638 7.51e-87 276
Msa0719590 AT5G35810.1 38.614 303 177 4 94 389 35 335 1.51e-66 215
Msa0719590 AT5G04730.1 37.026 343 211 4 46 385 248 588 2.61e-66 221
Msa0719590 AT5G04700.1 39.118 340 201 5 49 385 319 655 3.90e-66 222
Msa0719590 AT5G04690.1 37.870 338 203 5 49 385 280 611 5.87e-61 207
Msa0719590 AT5G04690.3 37.870 338 203 5 49 385 300 631 1.12e-60 207
Msa0719590 AT5G04690.2 37.870 338 203 5 49 385 314 645 1.43e-60 207
Msa0719590 AT5G04680.2 35.345 348 211 5 49 385 183 527 2.53e-57 196
Msa0719590 AT5G04680.3 35.345 348 211 5 49 385 292 636 3.56e-56 195
Msa0719590 AT5G04680.4 35.345 348 211 5 49 385 306 650 4.01e-56 195
Msa0719590 AT5G04680.1 35.345 348 211 5 49 385 335 679 6.15e-56 195
Msa0719590 AT3G54065.1 45.930 172 87 1 183 348 8 179 6.35e-47 160
Msa0719590 AT4G03500.1 26.119 268 168 8 97 344 321 578 5.14e-11 64.7
Msa0719590 AT4G03500.2 26.119 268 168 8 97 344 298 555 5.27e-11 64.7
Msa0719590 AT4G03500.3 26.119 268 168 8 97 344 298 555 5.27e-11 64.7

Find 72 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATCTGGCTGGAAATTT+AGG 0.125517 5_1:-14981820 Msa0719590:CDS
AAGCTAACCCTGACCTATTA+TGG 0.190354 5_1:-14981987 Msa0719590:CDS
ATACATGATAAAACTGTAAA+TGG 0.215912 5_1:-14981892 Msa0719590:CDS
TTCACTTGCTATGCTCTTAA+AGG 0.220345 5_1:-14981137 Msa0719590:CDS
ACATATTCACATGTCATTTC+AGG 0.226779 5_1:-14982658 Msa0719590:CDS
GAATTCTAAAGCACATTAAT+TGG 0.237125 5_1:+14980887 None:intergenic
TCTTACTCTCTTTCTTCTTT+AGG 0.245428 5_1:-14983044 Msa0719590:CDS
TGCATCTGGCTGGAAATTTA+GGG 0.279473 5_1:-14981819 Msa0719590:CDS
ATAAAATTTCTCTTTGCATT+TGG 0.280690 5_1:+14981758 None:intergenic
CACTAGCTCCTTGTGGCTTT+CGG 0.282604 5_1:+14981498 None:intergenic
ATTCTCTAGAGCATTGTTCT+TGG 0.303183 5_1:-14980916 Msa0719590:three_prime_UTR
TCTTCTTTAGGAAGGATCTT+TGG 0.321301 5_1:-14983032 Msa0719590:CDS
ACTTAAGCGGCAGAGACTTT+AGG 0.331258 5_1:+14981221 None:intergenic
AGATTTAGAACATTTCATTC+AGG 0.349364 5_1:+14983064 None:intergenic
TAACTAGTTGATAGTACATT+TGG 0.353307 5_1:+14980865 None:intergenic
ACTTCAGTCCTGCTATTCAT+TGG 0.354216 5_1:-14981277 Msa0719590:CDS
CTTCTCTGTGGTGTCCATGA+TGG 0.354652 5_1:-14981173 Msa0719590:CDS
ACTAATCAGTAAGTTTCATT+TGG 0.359252 5_1:+14981003 None:intergenic
CAGAGAAGAAAAGCATAATC+AGG 0.369758 5_1:+14981188 None:intergenic
TGATAATACCCTCTTGCATC+TGG 0.372207 5_1:-14981833 Msa0719590:CDS
TATGTCATTTGCCAGTATTC+CGG 0.372475 5_1:-14981089 Msa0719590:CDS
TCAATAGCCCATAATAGGTC+AGG 0.405110 5_1:+14981979 None:intergenic
AAGAACAATCACCGGAATAC+TGG 0.406609 5_1:+14981078 None:intergenic
TTAGCAATATTAAAATTGTC+TGG 0.415689 5_1:-14982633 Msa0719590:intron
TCACTTGCTATGCTCTTAAA+GGG 0.427681 5_1:-14981136 Msa0719590:CDS
CTGTCTTGATTGTTTCCACC+AGG 0.436340 5_1:+14981379 None:intergenic
TGGAATTCCCCTCTTCTTGA+AGG 0.440116 5_1:-14981356 Msa0719590:CDS
ACAAGGAGCTAGTGAAAGTA+GGG 0.442213 5_1:-14981489 Msa0719590:CDS
TCTGATCTTCACCGAAGATC+TGG 0.442488 5_1:-14981790 Msa0719590:CDS
AATTTCGCAAGTACATCTCT+TGG 0.447154 5_1:-14982988 Msa0719590:CDS
TCTCTTTGCATTTGGAGAGC+AGG 0.456333 5_1:+14981766 None:intergenic
AGCTAACCCTGACCTATTAT+GGG 0.458098 5_1:-14981986 Msa0719590:CDS
GCTGCAGCTTTCACAGTCCC+TGG 0.462822 5_1:-14981397 Msa0719590:CDS
ATAAATTGTTTAATTTGCTA+TGG 0.467108 5_1:+14983105 None:intergenic
AATTGTTCACCCCAAGTGTA+AGG 0.470620 5_1:-14981563 Msa0719590:CDS
ACTCTCTTTCTTCTTTAGGA+AGG 0.475787 5_1:-14983040 Msa0719590:CDS
GGAGAGCAGGACCAGATCTT+CGG 0.475928 5_1:+14981779 None:intergenic
ATTTCGCAAGTACATCTCTT+GGG 0.489678 5_1:-14982987 Msa0719590:intron
AATACCCTCTTGCATCTGGC+TGG 0.489835 5_1:-14981829 Msa0719590:CDS
TAGAACATTTCATTCAGGTA+TGG 0.495356 5_1:+14983069 None:intergenic
AACGGCGCGTTATGCAGAAA+AGG 0.500771 5_1:-14981248 Msa0719590:CDS
CTTTAGGAAGGATCTTTGGA+TGG 0.516657 5_1:-14983028 Msa0719590:CDS
CACAAGGAGCTAGTGAAAGT+AGG 0.522348 5_1:-14981490 Msa0719590:CDS
TTAGAATTCCAATGAATAGC+AGG 0.532264 5_1:+14981269 None:intergenic
CTACTTTCACTAGCTCCTTG+TGG 0.546091 5_1:+14981491 None:intergenic
GCTATTCATTGGAATTCTAA+CGG 0.563684 5_1:-14981266 Msa0719590:CDS
TAAGGAATCTGAACTGAGAG+AGG 0.568722 5_1:-14982079 Msa0719590:CDS
AAATGGGCAAAAGATACAGC+TGG 0.580445 5_1:-14981463 Msa0719590:CDS
ATGCTCTTAAAGGGACATCA+AGG 0.582246 5_1:-14981127 Msa0719590:CDS
AGCACAGAAAGCAACCATCA+TGG 0.585868 5_1:+14981159 None:intergenic
ATGTTGCAAGCAGCTAAGCA+TGG 0.587732 5_1:-14982039 Msa0719590:CDS
ATGATAAAACTGTAAATGGA+CGG 0.602518 5_1:-14981888 Msa0719590:CDS
TACTATCAACTAGTTACATG+TGG 0.603983 5_1:-14980858 Msa0719590:three_prime_UTR
TGTCTTGATTGTTTCCACCA+GGG 0.606616 5_1:+14981380 None:intergenic
CAATAGCCCATAATAGGTCA+GGG 0.609144 5_1:+14981980 None:intergenic
AGAGAAGAAAAGCATAATCA+GGG 0.609965 5_1:+14981189 None:intergenic
TAAAACTGTAAATGGACGGA+AGG 0.611261 5_1:-14981884 Msa0719590:CDS
TCAATATTTCAAGCACTAGA+CGG 0.613649 5_1:+14982130 None:intergenic
ATGAAGAGTCGCAACTGTGA+AGG 0.615755 5_1:+14981052 None:intergenic
AGATCTTCGGTGAAGATCAG+AGG 0.623561 5_1:+14981792 None:intergenic
GAAGGTACAAGAACAATCAC+CGG 0.632232 5_1:+14981070 None:intergenic
CTTTCGGTAAATATCTCGCG+AGG 0.637192 5_1:+14981514 None:intergenic
GCAGCTTTCACAGTCCCTGG+TGG 0.637210 5_1:-14981394 Msa0719590:CDS
GATATTTACCGAAAGCCACA+AGG 0.638262 5_1:-14981506 Msa0719590:CDS
AATTTCCAGCCAGATGCAAG+AGG 0.644750 5_1:+14981824 None:intergenic
ATTTCCAGCCAGATGCAAGA+GGG 0.653848 5_1:+14981825 None:intergenic
CTTCGGTGAAGATCAGAGGA+AGG 0.655276 5_1:+14981796 None:intergenic
GAAAGCTGCAGCGAACATGA+TGG 0.660041 5_1:+14981408 None:intergenic
TTGAGTTCATAGATGCAATG+AGG 0.660248 5_1:-14982011 Msa0719590:CDS
GGTGGAAACAATCAAGACAG+TGG 0.670462 5_1:-14981376 Msa0719590:CDS
TATATGATAGCATGCAACTG+AGG 0.676557 5_1:-14980948 Msa0719590:three_prime_UTR
CAAGGAGCTAGTGAAAGTAG+GGG 0.713895 5_1:-14981488 Msa0719590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATGAAAGTTATTAAAAA+TGG + chr5_1:14981259-14981278 None:intergenic 10.0%
!! TAAATGAAAGTTATTAAAAA+TGG + chr5_1:14981259-14981278 None:intergenic 10.0%
!!! ATAAATTGTTTAATTTGCTA+TGG + chr5_1:14980851-14980870 None:intergenic 15.0%
!!! TTTTAATAACTTTCATTTAC+AGG - chr5_1:14981260-14981279 Msa0719590:CDS 15.0%
!!! ATAAATTGTTTAATTTGCTA+TGG + chr5_1:14980851-14980870 None:intergenic 15.0%
!!! TTTTAATAACTTTCATTTAC+AGG - chr5_1:14981260-14981279 Msa0719590:CDS 15.0%
!! TTAGCAATATTAAAATTGTC+TGG - chr5_1:14981320-14981339 Msa0719590:CDS 20.0%
!! AAGTAGTTATAACTTAGTAT+AGG - chr5_1:14981430-14981449 Msa0719590:CDS 20.0%
!!! CCTTAAATTCTTGAATTTTT+TGG + chr5_1:14981859-14981878 None:intergenic 20.0%
!! CCAAAAAATTCAAGAATTTA+AGG - chr5_1:14981856-14981875 Msa0719590:CDS 20.0%
!! ATACATGATAAAACTGTAAA+TGG - chr5_1:14982061-14982080 Msa0719590:CDS 20.0%
!! ATAAAATTTCTCTTTGCATT+TGG + chr5_1:14982198-14982217 None:intergenic 20.0%
!!! AAATGCAAAGAGAAATTTTA+TGG - chr5_1:14982197-14982216 Msa0719590:intron 20.0%
!! TAACATAAGGTTTATCAAAT+AGG + chr5_1:14982292-14982311 None:intergenic 20.0%
!! AATCAAGATCTTATAACATA+AGG + chr5_1:14982305-14982324 None:intergenic 20.0%
!! TATGATAAAGTTTATATGCT+TGG + chr5_1:14982339-14982358 None:intergenic 20.0%
!! TAAACTTTATCATAGCATAA+TGG - chr5_1:14982345-14982364 Msa0719590:intron 20.0%
!! AAACTTTATCATAGCATAAT+GGG - chr5_1:14982346-14982365 Msa0719590:intron 20.0%
!! TTAGCAATATTAAAATTGTC+TGG - chr5_1:14981320-14981339 Msa0719590:CDS 20.0%
!! AAGTAGTTATAACTTAGTAT+AGG - chr5_1:14981430-14981449 Msa0719590:CDS 20.0%
!!! CCTTAAATTCTTGAATTTTT+TGG + chr5_1:14981859-14981878 None:intergenic 20.0%
!! CCAAAAAATTCAAGAATTTA+AGG - chr5_1:14981856-14981875 Msa0719590:CDS 20.0%
!! ATACATGATAAAACTGTAAA+TGG - chr5_1:14982061-14982080 Msa0719590:CDS 20.0%
!! ATAAAATTTCTCTTTGCATT+TGG + chr5_1:14982198-14982217 None:intergenic 20.0%
!!! AAATGCAAAGAGAAATTTTA+TGG - chr5_1:14982197-14982216 Msa0719590:intron 20.0%
!! TAACATAAGGTTTATCAAAT+AGG + chr5_1:14982292-14982311 None:intergenic 20.0%
!! AATCAAGATCTTATAACATA+AGG + chr5_1:14982305-14982324 None:intergenic 20.0%
!! TATGATAAAGTTTATATGCT+TGG + chr5_1:14982339-14982358 None:intergenic 20.0%
!! TAAACTTTATCATAGCATAA+TGG - chr5_1:14982345-14982364 Msa0719590:intron 20.0%
!! AAACTTTATCATAGCATAAT+GGG - chr5_1:14982346-14982365 Msa0719590:intron 20.0%
!! AGATTTAGAACATTTCATTC+AGG + chr5_1:14980892-14980911 None:intergenic 25.0%
! AATAACTTTCATTTACAGGT+CGG - chr5_1:14981264-14981283 Msa0719590:CDS 25.0%
!! GTAATGTGTTTTCATAATGA+TGG - chr5_1:14981462-14981481 Msa0719590:CDS 25.0%
!! TTTTATCAATAGCCCATAAT+AGG + chr5_1:14981982-14982001 None:intergenic 25.0%
! GCTATTGATAAAAATAAGAG+AGG - chr5_1:14981989-14982008 Msa0719590:CDS 25.0%
! ATGATAAAACTGTAAATGGA+CGG - chr5_1:14982065-14982084 Msa0719590:CDS 25.0%
!! AAGAGAAATTTTATGGTTTC+AGG - chr5_1:14982204-14982223 Msa0719590:intron 25.0%
!! CTTCTTATCTTCTACATTTT+TGG + chr5_1:14982419-14982438 None:intergenic 25.0%
! ACTAATCAGTAAGTTTCATT+TGG + chr5_1:14982953-14982972 None:intergenic 25.0%
!!! GAATTCTAAAGCACATTAAT+TGG + chr5_1:14983069-14983088 None:intergenic 25.0%
!!! TAACTAGTTGATAGTACATT+TGG + chr5_1:14983091-14983110 None:intergenic 25.0%
!! AGATTTAGAACATTTCATTC+AGG + chr5_1:14980892-14980911 None:intergenic 25.0%
! AATAACTTTCATTTACAGGT+CGG - chr5_1:14981264-14981283 Msa0719590:CDS 25.0%
!! GTAATGTGTTTTCATAATGA+TGG - chr5_1:14981462-14981481 Msa0719590:CDS 25.0%
!! TTTTATCAATAGCCCATAAT+AGG + chr5_1:14981982-14982001 None:intergenic 25.0%
! GCTATTGATAAAAATAAGAG+AGG - chr5_1:14981989-14982008 Msa0719590:CDS 25.0%
! ATGATAAAACTGTAAATGGA+CGG - chr5_1:14982065-14982084 Msa0719590:CDS 25.0%
!! AAGAGAAATTTTATGGTTTC+AGG - chr5_1:14982204-14982223 Msa0719590:intron 25.0%
!! CTTCTTATCTTCTACATTTT+TGG + chr5_1:14982419-14982438 None:intergenic 25.0%
! ACTAATCAGTAAGTTTCATT+TGG + chr5_1:14982953-14982972 None:intergenic 25.0%
!!! GAATTCTAAAGCACATTAAT+TGG + chr5_1:14983069-14983088 None:intergenic 25.0%
!!! TAACTAGTTGATAGTACATT+TGG + chr5_1:14983091-14983110 None:intergenic 25.0%
TAGAACATTTCATTCAGGTA+TGG + chr5_1:14980887-14980906 None:intergenic 30.0%
TCTTACTCTCTTTCTTCTTT+AGG - chr5_1:14980909-14980928 Msa0719590:three_prime_UTR 30.0%
! ACATATTCACATGTCATTTC+AGG - chr5_1:14981295-14981314 Msa0719590:CDS 30.0%
!!! TTTTTTCCTTATGTATCAGC+TGG - chr5_1:14981381-14981400 Msa0719590:CDS 30.0%
! TGTTTTCATAATGATGGCTA+TGG - chr5_1:14981468-14981487 Msa0719590:CDS 30.0%
TTGGCTTATAACAAACACAT+TGG + chr5_1:14981570-14981589 None:intergenic 30.0%
!! ATGTGTTTGTTATAAGCCAA+TGG - chr5_1:14981570-14981589 Msa0719590:CDS 30.0%
!! TGTGTTTGTTATAAGCCAAT+GGG - chr5_1:14981571-14981590 Msa0719590:CDS 30.0%
ACTACAATTGTCTTCTCATT+TGG + chr5_1:14981681-14981700 None:intergenic 30.0%
! ATTGCTGTTCATCATAGAAT+TGG + chr5_1:14981773-14981792 None:intergenic 30.0%
TCAATATTTCAAGCACTAGA+CGG + chr5_1:14981826-14981845 None:intergenic 30.0%
!! CAGTTTTATCATGTATGAGT+TGG + chr5_1:14982057-14982076 None:intergenic 30.0%
! AGGTTCTGATGAATAAACTA+TGG + chr5_1:14982272-14982291 None:intergenic 30.0%
TTAGAATTCCAATGAATAGC+AGG + chr5_1:14982687-14982706 None:intergenic 30.0%
GCTATTCATTGGAATTCTAA+CGG - chr5_1:14982687-14982706 Msa0719590:intron 30.0%
! AGAGAAGAAAAGCATAATCA+GGG + chr5_1:14982767-14982786 None:intergenic 30.0%
TACTATCAACTAGTTACATG+TGG - chr5_1:14983095-14983114 Msa0719590:five_prime_UTR 30.0%
TAGAACATTTCATTCAGGTA+TGG + chr5_1:14980887-14980906 None:intergenic 30.0%
TCTTACTCTCTTTCTTCTTT+AGG - chr5_1:14980909-14980928 Msa0719590:three_prime_UTR 30.0%
! ACATATTCACATGTCATTTC+AGG - chr5_1:14981295-14981314 Msa0719590:CDS 30.0%
!!! TTTTTTCCTTATGTATCAGC+TGG - chr5_1:14981381-14981400 Msa0719590:CDS 30.0%
! TGTTTTCATAATGATGGCTA+TGG - chr5_1:14981468-14981487 Msa0719590:CDS 30.0%
TTGGCTTATAACAAACACAT+TGG + chr5_1:14981570-14981589 None:intergenic 30.0%
!! ATGTGTTTGTTATAAGCCAA+TGG - chr5_1:14981570-14981589 Msa0719590:CDS 30.0%
!! TGTGTTTGTTATAAGCCAAT+GGG - chr5_1:14981571-14981590 Msa0719590:CDS 30.0%
ACTACAATTGTCTTCTCATT+TGG + chr5_1:14981681-14981700 None:intergenic 30.0%
! ATTGCTGTTCATCATAGAAT+TGG + chr5_1:14981773-14981792 None:intergenic 30.0%
TCAATATTTCAAGCACTAGA+CGG + chr5_1:14981826-14981845 None:intergenic 30.0%
!! CAGTTTTATCATGTATGAGT+TGG + chr5_1:14982057-14982076 None:intergenic 30.0%
! AGGTTCTGATGAATAAACTA+TGG + chr5_1:14982272-14982291 None:intergenic 30.0%
TTAGAATTCCAATGAATAGC+AGG + chr5_1:14982687-14982706 None:intergenic 30.0%
GCTATTCATTGGAATTCTAA+CGG - chr5_1:14982687-14982706 Msa0719590:intron 30.0%
! AGAGAAGAAAAGCATAATCA+GGG + chr5_1:14982767-14982786 None:intergenic 30.0%
TACTATCAACTAGTTACATG+TGG - chr5_1:14983095-14983114 Msa0719590:five_prime_UTR 30.0%
! ACTCTCTTTCTTCTTTAGGA+AGG - chr5_1:14980913-14980932 Msa0719590:three_prime_UTR 35.0%
! TCTTCTTTAGGAAGGATCTT+TGG - chr5_1:14980921-14980940 Msa0719590:three_prime_UTR 35.0%
AATTTCGCAAGTACATCTCT+TGG - chr5_1:14980965-14980984 Msa0719590:three_prime_UTR 35.0%
ATTTCGCAAGTACATCTCTT+GGG - chr5_1:14980966-14980985 Msa0719590:three_prime_UTR 35.0%
! TAGGTAGTTTTCGATTCTCA+TGG - chr5_1:14980989-14981008 Msa0719590:three_prime_UTR 35.0%
TGTTTCCACTCTCATATTTG+TGG + chr5_1:14981026-14981045 None:intergenic 35.0%
AGAGTGGAAACATACTATGT+TGG - chr5_1:14981034-14981053 Msa0719590:CDS 35.0%
! GAAACATACTATGTTGGTCT+TGG - chr5_1:14981040-14981059 Msa0719590:CDS 35.0%
TAACTTCCAGCTGATACATA+AGG + chr5_1:14981390-14981409 None:intergenic 35.0%
GCTTATAACAAACACATTGG+CGG + chr5_1:14981567-14981586 None:intergenic 35.0%
!! GTGTTTGTTATAAGCCAATG+GGG - chr5_1:14981572-14981591 Msa0719590:CDS 35.0%
TCATCATAGAATTGGAGAGA+CGG + chr5_1:14981765-14981784 None:intergenic 35.0%
TTGAGTTCATAGATGCAATG+AGG - chr5_1:14981942-14981961 Msa0719590:CDS 35.0%
! GTTGGAAGACTTCTTTTCTA+CGG + chr5_1:14982039-14982058 None:intergenic 35.0%
TAAAACTGTAAATGGACGGA+AGG - chr5_1:14982069-14982088 Msa0719590:CDS 35.0%
!!! TTTTTGGCTTCCTTACACTT+GGG + chr5_1:14982403-14982422 None:intergenic 35.0%
!!! ATTTTTGGCTTCCTTACACT+TGG + chr5_1:14982404-14982423 None:intergenic 35.0%
TAGTGAAAGTAGGGGAAAAA+TGG - chr5_1:14982473-14982492 Msa0719590:intron 35.0%
AGTGAAAGTAGGGGAAAAAT+GGG - chr5_1:14982474-14982493 Msa0719590:intron 35.0%
! TGTTTTGTCCTTCAAGAAGA+GGG + chr5_1:14982608-14982627 None:intergenic 35.0%
! ATGTTTTGTCCTTCAAGAAG+AGG + chr5_1:14982609-14982628 None:intergenic 35.0%
AGGGCAAAAAGTAACTTAAG+CGG + chr5_1:14982748-14982767 None:intergenic 35.0%
! CAGAGAAGAAAAGCATAATC+AGG + chr5_1:14982768-14982787 None:intergenic 35.0%
! GATTATGCTTTTCTTCTCTG+TGG - chr5_1:14982768-14982787 Msa0719590:intron 35.0%
!! TTCACTTGCTATGCTCTTAA+AGG - chr5_1:14982816-14982835 Msa0719590:intron 35.0%
!! TCACTTGCTATGCTCTTAAA+GGG - chr5_1:14982817-14982836 Msa0719590:intron 35.0%
! TATGTCATTTGCCAGTATTC+CGG - chr5_1:14982864-14982883 Msa0719590:intron 35.0%
TATATGATAGCATGCAACTG+AGG - chr5_1:14983005-14983024 Msa0719590:CDS 35.0%
!! ATTCTCTAGAGCATTGTTCT+TGG - chr5_1:14983037-14983056 Msa0719590:CDS 35.0%
! ACTCTCTTTCTTCTTTAGGA+AGG - chr5_1:14980913-14980932 Msa0719590:three_prime_UTR 35.0%
! TCTTCTTTAGGAAGGATCTT+TGG - chr5_1:14980921-14980940 Msa0719590:three_prime_UTR 35.0%
AATTTCGCAAGTACATCTCT+TGG - chr5_1:14980965-14980984 Msa0719590:three_prime_UTR 35.0%
ATTTCGCAAGTACATCTCTT+GGG - chr5_1:14980966-14980985 Msa0719590:three_prime_UTR 35.0%
! TAGGTAGTTTTCGATTCTCA+TGG - chr5_1:14980989-14981008 Msa0719590:three_prime_UTR 35.0%
TGTTTCCACTCTCATATTTG+TGG + chr5_1:14981026-14981045 None:intergenic 35.0%
AGAGTGGAAACATACTATGT+TGG - chr5_1:14981034-14981053 Msa0719590:CDS 35.0%
! GAAACATACTATGTTGGTCT+TGG - chr5_1:14981040-14981059 Msa0719590:CDS 35.0%
TAACTTCCAGCTGATACATA+AGG + chr5_1:14981390-14981409 None:intergenic 35.0%
GCTTATAACAAACACATTGG+CGG + chr5_1:14981567-14981586 None:intergenic 35.0%
!! GTGTTTGTTATAAGCCAATG+GGG - chr5_1:14981572-14981591 Msa0719590:CDS 35.0%
TCATCATAGAATTGGAGAGA+CGG + chr5_1:14981765-14981784 None:intergenic 35.0%
TTGAGTTCATAGATGCAATG+AGG - chr5_1:14981942-14981961 Msa0719590:CDS 35.0%
! GTTGGAAGACTTCTTTTCTA+CGG + chr5_1:14982039-14982058 None:intergenic 35.0%
TAAAACTGTAAATGGACGGA+AGG - chr5_1:14982069-14982088 Msa0719590:CDS 35.0%
!!! TTTTTGGCTTCCTTACACTT+GGG + chr5_1:14982403-14982422 None:intergenic 35.0%
!!! ATTTTTGGCTTCCTTACACT+TGG + chr5_1:14982404-14982423 None:intergenic 35.0%
TAGTGAAAGTAGGGGAAAAA+TGG - chr5_1:14982473-14982492 Msa0719590:intron 35.0%
AGTGAAAGTAGGGGAAAAAT+GGG - chr5_1:14982474-14982493 Msa0719590:intron 35.0%
! TGTTTTGTCCTTCAAGAAGA+GGG + chr5_1:14982608-14982627 None:intergenic 35.0%
! ATGTTTTGTCCTTCAAGAAG+AGG + chr5_1:14982609-14982628 None:intergenic 35.0%
AGGGCAAAAAGTAACTTAAG+CGG + chr5_1:14982748-14982767 None:intergenic 35.0%
! CAGAGAAGAAAAGCATAATC+AGG + chr5_1:14982768-14982787 None:intergenic 35.0%
! GATTATGCTTTTCTTCTCTG+TGG - chr5_1:14982768-14982787 Msa0719590:intron 35.0%
!! TTCACTTGCTATGCTCTTAA+AGG - chr5_1:14982816-14982835 Msa0719590:intron 35.0%
!! TCACTTGCTATGCTCTTAAA+GGG - chr5_1:14982817-14982836 Msa0719590:intron 35.0%
! TATGTCATTTGCCAGTATTC+CGG - chr5_1:14982864-14982883 Msa0719590:intron 35.0%
TATATGATAGCATGCAACTG+AGG - chr5_1:14983005-14983024 Msa0719590:CDS 35.0%
!! ATTCTCTAGAGCATTGTTCT+TGG - chr5_1:14983037-14983056 Msa0719590:CDS 35.0%
! CTTTAGGAAGGATCTTTGGA+TGG - chr5_1:14980925-14980944 Msa0719590:three_prime_UTR 40.0%
CACTCTCATATTTGTGGATG+TGG + chr5_1:14981020-14981039 None:intergenic 40.0%
CACATCCACAAATATGAGAG+TGG - chr5_1:14981018-14981037 Msa0719590:CDS 40.0%
GTAAAGACGCGTGATATGAT+AGG + chr5_1:14981501-14981520 None:intergenic 40.0%
CATGATTAGATGGCCACTAA+CGG + chr5_1:14981648-14981667 None:intergenic 40.0%
AGTGGCCATCTAATCATGAT+CGG - chr5_1:14981650-14981669 Msa0719590:intron 40.0%
TAAGGAATCTGAACTGAGAG+AGG - chr5_1:14981874-14981893 Msa0719590:CDS 40.0%
AAGCTAACCCTGACCTATTA+TGG - chr5_1:14981966-14981985 Msa0719590:CDS 40.0%
AGCTAACCCTGACCTATTAT+GGG - chr5_1:14981967-14981986 Msa0719590:CDS 40.0%
CAATAGCCCATAATAGGTCA+GGG + chr5_1:14981976-14981995 None:intergenic 40.0%
TCAATAGCCCATAATAGGTC+AGG + chr5_1:14981977-14981996 None:intergenic 40.0%
TGATAATACCCTCTTGCATC+TGG - chr5_1:14982120-14982139 Msa0719590:CDS 40.0%
TTGCATCTGGCTGGAAATTT+AGG - chr5_1:14982133-14982152 Msa0719590:CDS 40.0%
TGCATCTGGCTGGAAATTTA+GGG - chr5_1:14982134-14982153 Msa0719590:CDS 40.0%
! TAGCATAATGGGATGAATGC+AGG - chr5_1:14982357-14982376 Msa0719590:intron 40.0%
AATTGTTCACCCCAAGTGTA+AGG - chr5_1:14982390-14982409 Msa0719590:intron 40.0%
!!! TTTTGGCTTCCTTACACTTG+GGG + chr5_1:14982402-14982421 None:intergenic 40.0%
GATATTTACCGAAAGCCACA+AGG - chr5_1:14982447-14982466 Msa0719590:intron 40.0%
ACAAGGAGCTAGTGAAAGTA+GGG - chr5_1:14982464-14982483 Msa0719590:intron 40.0%
AAATGGGCAAAAGATACAGC+TGG - chr5_1:14982490-14982509 Msa0719590:intron 40.0%
TGTCTTGATTGTTTCCACCA+GGG + chr5_1:14982576-14982595 None:intergenic 40.0%
! GTTTTGTCCTTCAAGAAGAG+GGG + chr5_1:14982607-14982626 None:intergenic 40.0%
ACTTCAGTCCTGCTATTCAT+TGG - chr5_1:14982676-14982695 Msa0719590:intron 40.0%
ATGCTCTTAAAGGGACATCA+AGG - chr5_1:14982826-14982845 Msa0719590:intron 40.0%
AAGAACAATCACCGGAATAC+TGG + chr5_1:14982878-14982897 None:intergenic 40.0%
! GAAGGTACAAGAACAATCAC+CGG + chr5_1:14982886-14982905 None:intergenic 40.0%
! CTTTAGGAAGGATCTTTGGA+TGG - chr5_1:14980925-14980944 Msa0719590:three_prime_UTR 40.0%
CACTCTCATATTTGTGGATG+TGG + chr5_1:14981020-14981039 None:intergenic 40.0%
CACATCCACAAATATGAGAG+TGG - chr5_1:14981018-14981037 Msa0719590:CDS 40.0%
GTAAAGACGCGTGATATGAT+AGG + chr5_1:14981501-14981520 None:intergenic 40.0%
CATGATTAGATGGCCACTAA+CGG + chr5_1:14981648-14981667 None:intergenic 40.0%
AGTGGCCATCTAATCATGAT+CGG - chr5_1:14981650-14981669 Msa0719590:intron 40.0%
TAAGGAATCTGAACTGAGAG+AGG - chr5_1:14981874-14981893 Msa0719590:CDS 40.0%
AAGCTAACCCTGACCTATTA+TGG - chr5_1:14981966-14981985 Msa0719590:CDS 40.0%
AGCTAACCCTGACCTATTAT+GGG - chr5_1:14981967-14981986 Msa0719590:CDS 40.0%
CAATAGCCCATAATAGGTCA+GGG + chr5_1:14981976-14981995 None:intergenic 40.0%
TCAATAGCCCATAATAGGTC+AGG + chr5_1:14981977-14981996 None:intergenic 40.0%
TGATAATACCCTCTTGCATC+TGG - chr5_1:14982120-14982139 Msa0719590:CDS 40.0%
TTGCATCTGGCTGGAAATTT+AGG - chr5_1:14982133-14982152 Msa0719590:CDS 40.0%
TGCATCTGGCTGGAAATTTA+GGG - chr5_1:14982134-14982153 Msa0719590:CDS 40.0%
! TAGCATAATGGGATGAATGC+AGG - chr5_1:14982357-14982376 Msa0719590:intron 40.0%
AATTGTTCACCCCAAGTGTA+AGG - chr5_1:14982390-14982409 Msa0719590:intron 40.0%
!!! TTTTGGCTTCCTTACACTTG+GGG + chr5_1:14982402-14982421 None:intergenic 40.0%
GATATTTACCGAAAGCCACA+AGG - chr5_1:14982447-14982466 Msa0719590:intron 40.0%
ACAAGGAGCTAGTGAAAGTA+GGG - chr5_1:14982464-14982483 Msa0719590:intron 40.0%
AAATGGGCAAAAGATACAGC+TGG - chr5_1:14982490-14982509 Msa0719590:intron 40.0%
TGTCTTGATTGTTTCCACCA+GGG + chr5_1:14982576-14982595 None:intergenic 40.0%
! GTTTTGTCCTTCAAGAAGAG+GGG + chr5_1:14982607-14982626 None:intergenic 40.0%
ACTTCAGTCCTGCTATTCAT+TGG - chr5_1:14982676-14982695 Msa0719590:intron 40.0%
ATGCTCTTAAAGGGACATCA+AGG - chr5_1:14982826-14982845 Msa0719590:intron 40.0%
AAGAACAATCACCGGAATAC+TGG + chr5_1:14982878-14982897 None:intergenic 40.0%
! GAAGGTACAAGAACAATCAC+CGG + chr5_1:14982886-14982905 None:intergenic 40.0%
AAACCTTCTCATGCACAGTG+CGG - chr5_1:14981522-14981541 Msa0719590:CDS 45.0%
TGTTATAAGCCAATGGGGTG+TGG - chr5_1:14981577-14981596 Msa0719590:CDS 45.0%
ATCTCTACAGTCACCGTTAG+TGG - chr5_1:14981632-14981651 Msa0719590:intron 45.0%
GCCATCTAATCATGATCGGA+CGG - chr5_1:14981654-14981673 Msa0719590:intron 45.0%
ACCGTCCGATCATGATTAGA+TGG + chr5_1:14981658-14981677 None:intergenic 45.0%
ATGTTGCAAGCAGCTAAGCA+TGG - chr5_1:14981914-14981933 Msa0719590:CDS 45.0%
ATTTCCAGCCAGATGCAAGA+GGG + chr5_1:14982131-14982150 None:intergenic 45.0%
AATTTCCAGCCAGATGCAAG+AGG + chr5_1:14982132-14982151 None:intergenic 45.0%
AGATCTTCGGTGAAGATCAG+AGG + chr5_1:14982164-14982183 None:intergenic 45.0%
TCTGATCTTCACCGAAGATC+TGG - chr5_1:14982163-14982182 Msa0719590:CDS 45.0%
TCTCTTTGCATTTGGAGAGC+AGG + chr5_1:14982190-14982209 None:intergenic 45.0%
CTTTCGGTAAATATCTCGCG+AGG + chr5_1:14982442-14982461 None:intergenic 45.0%
CTACTTTCACTAGCTCCTTG+TGG + chr5_1:14982465-14982484 None:intergenic 45.0%
CACAAGGAGCTAGTGAAAGT+AGG - chr5_1:14982463-14982482 Msa0719590:intron 45.0%
CAAGGAGCTAGTGAAAGTAG+GGG - chr5_1:14982465-14982484 Msa0719590:intron 45.0%
CTGTCTTGATTGTTTCCACC+AGG + chr5_1:14982577-14982596 None:intergenic 45.0%
GGTGGAAACAATCAAGACAG+TGG - chr5_1:14982577-14982596 Msa0719590:intron 45.0%
TGGAATTCCCCTCTTCTTGA+AGG - chr5_1:14982597-14982616 Msa0719590:intron 45.0%
ACTTAAGCGGCAGAGACTTT+AGG + chr5_1:14982735-14982754 None:intergenic 45.0%
AGCACAGAAAGCAACCATCA+TGG + chr5_1:14982797-14982816 None:intergenic 45.0%
ATGAAGAGTCGCAACTGTGA+AGG + chr5_1:14982904-14982923 None:intergenic 45.0%
AAACCTTCTCATGCACAGTG+CGG - chr5_1:14981522-14981541 Msa0719590:CDS 45.0%
TGTTATAAGCCAATGGGGTG+TGG - chr5_1:14981577-14981596 Msa0719590:CDS 45.0%
ATCTCTACAGTCACCGTTAG+TGG - chr5_1:14981632-14981651 Msa0719590:intron 45.0%
GCCATCTAATCATGATCGGA+CGG - chr5_1:14981654-14981673 Msa0719590:intron 45.0%
ACCGTCCGATCATGATTAGA+TGG + chr5_1:14981658-14981677 None:intergenic 45.0%
ATGTTGCAAGCAGCTAAGCA+TGG - chr5_1:14981914-14981933 Msa0719590:CDS 45.0%
ATTTCCAGCCAGATGCAAGA+GGG + chr5_1:14982131-14982150 None:intergenic 45.0%
AATTTCCAGCCAGATGCAAG+AGG + chr5_1:14982132-14982151 None:intergenic 45.0%
AGATCTTCGGTGAAGATCAG+AGG + chr5_1:14982164-14982183 None:intergenic 45.0%
TCTGATCTTCACCGAAGATC+TGG - chr5_1:14982163-14982182 Msa0719590:CDS 45.0%
TCTCTTTGCATTTGGAGAGC+AGG + chr5_1:14982190-14982209 None:intergenic 45.0%
CTTTCGGTAAATATCTCGCG+AGG + chr5_1:14982442-14982461 None:intergenic 45.0%
CTACTTTCACTAGCTCCTTG+TGG + chr5_1:14982465-14982484 None:intergenic 45.0%
CACAAGGAGCTAGTGAAAGT+AGG - chr5_1:14982463-14982482 Msa0719590:intron 45.0%
CAAGGAGCTAGTGAAAGTAG+GGG - chr5_1:14982465-14982484 Msa0719590:intron 45.0%
CTGTCTTGATTGTTTCCACC+AGG + chr5_1:14982577-14982596 None:intergenic 45.0%
GGTGGAAACAATCAAGACAG+TGG - chr5_1:14982577-14982596 Msa0719590:intron 45.0%
TGGAATTCCCCTCTTCTTGA+AGG - chr5_1:14982597-14982616 Msa0719590:intron 45.0%
ACTTAAGCGGCAGAGACTTT+AGG + chr5_1:14982735-14982754 None:intergenic 45.0%
AGCACAGAAAGCAACCATCA+TGG + chr5_1:14982797-14982816 None:intergenic 45.0%
ATGAAGAGTCGCAACTGTGA+AGG + chr5_1:14982904-14982923 None:intergenic 45.0%
!! ATATATATATATATATATGA+CGG + chr5_1:14981081-14981100 None:intergenic 5.0%
!! ATATATATATATATATATGA+CGG + chr5_1:14981081-14981100 None:intergenic 5.0%
CGCAAGTACATCTCTTGGGT+AGG - chr5_1:14980970-14980989 Msa0719590:three_prime_UTR 50.0%
ATTCCGCACTGTGCATGAGA+AGG + chr5_1:14981528-14981547 None:intergenic 50.0%
AATACCCTCTTGCATCTGGC+TGG - chr5_1:14982124-14982143 Msa0719590:CDS 50.0%
CTTCGGTGAAGATCAGAGGA+AGG + chr5_1:14982160-14982179 None:intergenic 50.0%
AATGGGATGAATGCAGGCTG+TGG - chr5_1:14982363-14982382 Msa0719590:intron 50.0%
CACTAGCTCCTTGTGGCTTT+CGG + chr5_1:14982458-14982477 None:intergenic 50.0%
GAAAGCTGCAGCGAACATGA+TGG + chr5_1:14982548-14982567 None:intergenic 50.0%
AACGGCGCGTTATGCAGAAA+AGG - chr5_1:14982705-14982724 Msa0719590:intron 50.0%
CTTCTCTGTGGTGTCCATGA+TGG - chr5_1:14982780-14982799 Msa0719590:intron 50.0%
CGCAAGTACATCTCTTGGGT+AGG - chr5_1:14980970-14980989 Msa0719590:three_prime_UTR 50.0%
ATTCCGCACTGTGCATGAGA+AGG + chr5_1:14981528-14981547 None:intergenic 50.0%
AATACCCTCTTGCATCTGGC+TGG - chr5_1:14982124-14982143 Msa0719590:CDS 50.0%
CTTCGGTGAAGATCAGAGGA+AGG + chr5_1:14982160-14982179 None:intergenic 50.0%
AATGGGATGAATGCAGGCTG+TGG - chr5_1:14982363-14982382 Msa0719590:intron 50.0%
CACTAGCTCCTTGTGGCTTT+CGG + chr5_1:14982458-14982477 None:intergenic 50.0%
GAAAGCTGCAGCGAACATGA+TGG + chr5_1:14982548-14982567 None:intergenic 50.0%
AACGGCGCGTTATGCAGAAA+AGG - chr5_1:14982705-14982724 Msa0719590:intron 50.0%
CTTCTCTGTGGTGTCCATGA+TGG - chr5_1:14982780-14982799 Msa0719590:intron 50.0%
TCCTGACAACCACACCCCAT+TGG + chr5_1:14981589-14981608 None:intergenic 55.0%
GGGGTGTGGTTGTCAGGAAT+CGG - chr5_1:14981591-14981610 Msa0719590:intron 55.0%
GGAGAGCAGGACCAGATCTT+CGG + chr5_1:14982177-14982196 None:intergenic 55.0%
TCCTGACAACCACACCCCAT+TGG + chr5_1:14981589-14981608 None:intergenic 55.0%
GGGGTGTGGTTGTCAGGAAT+CGG - chr5_1:14981591-14981610 Msa0719590:intron 55.0%
GGAGAGCAGGACCAGATCTT+CGG + chr5_1:14982177-14982196 None:intergenic 55.0%
GCCAATGGGGTGTGGTTGTC+AGG - chr5_1:14981585-14981604 Msa0719590:intron 60.0%
GCTGCAGCTTTCACAGTCCC+TGG - chr5_1:14982556-14982575 Msa0719590:intron 60.0%
GCAGCTTTCACAGTCCCTGG+TGG - chr5_1:14982559-14982578 Msa0719590:intron 60.0%
GCCAATGGGGTGTGGTTGTC+AGG - chr5_1:14981585-14981604 Msa0719590:intron 60.0%
GCTGCAGCTTTCACAGTCCC+TGG - chr5_1:14982556-14982575 Msa0719590:intron 60.0%
GCAGCTTTCACAGTCCCTGG+TGG - chr5_1:14982559-14982578 Msa0719590:intron 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 14980842 14983133 14980842 ID=Msa0719590;Name=Msa0719590
chr5_1 mRNA 14980842 14983133 14980842 ID=Msa0719590-mRNA-1;Parent=Msa0719590;Name=Msa0719590-mRNA-1;_AED=0.00;_eAED=0.00;_QI=52|1|1|1|0.33|0.25|4|176|389
chr5_1 exon 14980842 14981596 14980842 ID=Msa0719590-mRNA-1:exon:5790;Parent=Msa0719590-mRNA-1
chr5_1 exon 14981750 14982186 14981750 ID=Msa0719590-mRNA-1:exon:5789;Parent=Msa0719590-mRNA-1
chr5_1 exon 14982634 14982693 14982634 ID=Msa0719590-mRNA-1:exon:5788;Parent=Msa0719590-mRNA-1
chr5_1 exon 14982988 14983133 14982988 ID=Msa0719590-mRNA-1:exon:5787;Parent=Msa0719590-mRNA-1
chr5_1 five_prime_UTR 14983082 14983133 14983082 ID=Msa0719590-mRNA-1:five_prime_utr;Parent=Msa0719590-mRNA-1
chr5_1 CDS 14982988 14983081 14982988 ID=Msa0719590-mRNA-1:cds;Parent=Msa0719590-mRNA-1
chr5_1 CDS 14982634 14982693 14982634 ID=Msa0719590-mRNA-1:cds;Parent=Msa0719590-mRNA-1
chr5_1 CDS 14981750 14982186 14981750 ID=Msa0719590-mRNA-1:cds;Parent=Msa0719590-mRNA-1
chr5_1 CDS 14981018 14981596 14981018 ID=Msa0719590-mRNA-1:cds;Parent=Msa0719590-mRNA-1
chr5_1 three_prime_UTR 14980842 14981017 14980842 ID=Msa0719590-mRNA-1:three_prime_utr;Parent=Msa0719590-mRNA-1
Gene Sequence

>Msa0719590

ATGAAATGTTCTAAATCTTACTCTCTTTCTTCTTTAGGAAGGATCTTTGGATGGATGTTCAATATTTTGAAAATTTCGCAAGTACATCTCTTGGGTCGGATACTTGTACATATTCACATGTCATTTCAGGATTTAGCAATATTAAAATTGTCTGCAATAAGAGAAATATACAATCAGAAAATGACGCACCGTCTAGTGCTTGAAATATTGAATTGCTTGTACCAAAAAATTCAAGAATTTAAGGAATCTGAACTGAGAGAGGCTTCAGCGTACGATGCAATGTTGCAAGCAGCTAAGCATGGAAATATTGAGTTCATAGATGCAATGAGGAAAGCTAACCCTGACCTATTATGGGCTATTGATAAAAATAAGAGAGGTATATTTTCACACGCAATTTTGAACCGTAGAAAAGAAGTCTTCCAACTCATACATGATAAAACTGTAAATGGACGGAAGGAGATTGTTAGATGTCGTGTAGATGCATTTGATAATACCCTCTTGCATCTGGCTGGAAATTTAGGGCCTTCCTCTGATCTTCACCGAAGATCTGGTCCTGCTCTCCAAATGCAAAGAGAAATTTTATGGTTTCAGGCTGTGGAGAAAATTGTTCACCCCAAGTGTAAGGAAGCCAAAAATGTAGAAGATAAGAAGCCTCGCGAGATATTTACCGAAAGCCACAAGGAGCTAGTGAAAGTAGGGGAAAAATGGGCAAAAGATACAGCTGGTTCATTTACACTTGTTGCTACACTCATCACAACCATCATGTTCGCTGCAGCTTTCACAGTCCCTGGTGGAAACAATCAAGACAGTGGAATTCCCCTCTTCTTGAAGGACAAAACATTTAATGTGTTCATCATAGCAGATGCAATATCTCTTTTCACTTCTTCAACTTCAGTCCTGCTATTCATTGGAATTCTAACGGCGCGTTATGCAGAAAAGGATTTCCTAAAGTCTCTGCCGCTTAAGTTACTTTTTGCCCTGATTATGCTTTTCTTCTCTGTGGTGTCCATGATGGTTGCTTTCTGTGCTTCACTTGCTATGCTCTTAAAGGGACATCAAGGAGTCATAATAACAGCTATGTCATTTGCCAGTATTCCGGTGATTGTTCTTGTACCTTCACAGTTGCGACTCTTCATTGAGATTTTCAAGTCTACAGTATTGTCCAAATGA
Protein sequence

>Msa0719590

MKCSKSYSLSSLGRIFGWMFNILKISQVHLLGRILVHIHMSFQDLAILKLSAIREIYNQKMTHRLVLEILNCLYQKIQEFKESELREASAYDAMLQAAKHGNIEFIDAMRKANPDLLWAIDKNKRGIFSHAILNRRKEVFQLIHDKTVNGRKEIVRCRVDAFDNTLLHLAGNLGPSSDLHRRSGPALQMQREILWFQAVEKIVHPKCKEAKNVEDKKPREIFTESHKELVKVGEKWAKDTAGSFTLVATLITTIMFAAAFTVPGGNNQDSGIPLFLKDKTFNVFIIADAISLFTSSTSVLLFIGILTARYAEKDFLKSLPLKLLFALIMLFFSVVSMMVAFCASLAMLLKGHQGVIITAMSFASIPVIVLVPSQLRLFIEIFKSTVLSK*