AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0840960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0840960 MtrunA17_Chr5g0410341 76.573 747 154 7 3 733 5 746 0.0 1164
Msa0840960 MtrunA17_Chr5g0410171 73.431 749 160 7 2 732 6 733 0.0 1101
Msa0840960 MtrunA17_Chr5g0410271 95.413 327 15 0 408 734 2 328 0.0 643
Msa0840960 MtrunA17_Chr5g0410201 94.529 329 18 0 406 734 1 329 0.0 637
Msa0840960 MtrunA17_Chr6g0456101 45.491 754 359 14 2 726 4 734 0.0 592
Msa0840960 MtrunA17_Chr6g0457101 45.479 741 339 13 2 733 4 688 0.0 583
Msa0840960 MtrunA17_Chr5g0410581 40.598 803 386 22 5 731 8 795 2.19e-164 494
Msa0840960 MtrunA17_Chr5g0410461 53.664 464 167 9 313 730 1 462 6.38e-147 437
Msa0840960 MtrunA17_Chr6g0456141 58.101 358 143 4 380 733 30 384 5.87e-139 414
Msa0840960 MtrunA17_Chr5g0410371 68.581 296 87 2 439 730 1 294 5.83e-131 390
Msa0840960 MtrunA17_Chr5g0410291 87.245 196 21 1 137 332 1 192 3.47e-120 358
Msa0840960 MtrunA17_Chr5g0410211 85.787 197 27 1 137 332 1 197 9.20e-116 347
Msa0840960 MtrunA17_Chr5g0410191 84.896 192 29 0 542 733 2 193 2.70e-107 325
Msa0840960 MtrunA17_Chr5g0443001 32.907 626 362 14 117 734 30 605 1.39e-82 274
Msa0840960 MtrunA17_Chr5g0410181 88.148 135 16 0 600 734 1 135 3.01e-76 241
Msa0840960 MtrunA17_Chr3g0100741 30.579 605 355 15 117 713 32 579 2.02e-73 249
Msa0840960 MtrunA17_Chr5g0410251 90.826 109 10 0 1 109 1 109 8.52e-68 218
Msa0840960 MtrunA17_Chr2g0297701 38.592 355 190 8 383 732 240 571 1.68e-66 230
Msa0840960 MtrunA17_Chr2g0297701 32.487 197 115 6 121 316 48 227 2.93e-16 82.8
Msa0840960 MtrunA17_Chr3g0096941 29.305 604 363 15 117 712 32 579 2.20e-65 228
Msa0840960 MtrunA17_Chr6g0456151 44.558 294 135 8 2 277 4 287 1.54e-63 213
Msa0840960 MtrunA17_Chr2g0297491 37.798 336 200 4 401 730 45 377 5.43e-63 215
Msa0840960 MtrunA17_Chr5g0410541 53.333 210 87 5 527 731 13 216 3.31e-62 207
Msa0840960 MtrunA17_Chr5g0410451 50.500 200 94 1 537 731 36 235 8.98e-61 204
Msa0840960 MtrunA17_Chr2g0297481 36.765 340 198 8 403 734 145 475 1.20e-56 201
Msa0840960 MtrunA17_Chr2g0297681 36.937 333 202 4 403 729 358 688 7.82e-56 203
Msa0840960 MtrunA17_Chr2g0297691 36.873 339 196 7 403 730 360 691 4.79e-55 201
Msa0840960 MtrunA17_Chr5g0410411 40.566 318 138 9 3 281 5 310 1.93e-54 190
Msa0840960 MtrunA17_Chr3g0100301 47.959 196 95 1 531 726 209 397 3.80e-53 189
Msa0840960 MtrunA17_Chr2g0297651 36.228 334 204 4 403 730 360 690 5.57e-53 195
Msa0840960 MtrunA17_Chr2g0297711 33.913 345 220 5 391 730 185 526 5.88e-53 192
Msa0840960 MtrunA17_Chr2g0297711 30.921 152 93 5 128 278 58 198 5.51e-12 68.9
Msa0840960 MtrunA17_Chr5g0410381 44.490 245 108 5 109 331 3 241 1.36e-52 182
Msa0840960 MtrunA17_Chr2g0286551 28.436 633 374 18 153 726 42 654 1.08e-49 185
Msa0840960 MtrunA17_Chr2g0284501 26.614 635 387 18 153 733 47 656 1.07e-43 168
Msa0840960 MtrunA17_Chr3g0098481 32.476 311 203 4 426 730 22 331 3.17e-42 157
Msa0840960 MtrunA17_Chr5g0410471 43.363 226 103 6 32 250 105 312 2.42e-41 153
Msa0840960 MtrunA17_Chr5g0410511 42.564 195 107 1 542 731 2 196 1.03e-40 148
Msa0840960 MtrunA17_Chr2g0286601 34.812 293 180 4 421 712 371 653 1.15e-40 159
Msa0840960 MtrunA17_Chr2g0286601 25.446 224 144 7 116 331 4 212 3.52e-12 70.1
Msa0840960 MtrunA17_Chr2g0284541 26.667 615 387 14 153 724 37 630 1.45e-40 158
Msa0840960 MtrunA17_Chr3g0102001 32.680 306 185 4 438 731 440 736 2.58e-37 149
Msa0840960 MtrunA17_Chr3g0102001 29.386 228 137 7 121 334 22 239 5.25e-16 82.4
Msa0840960 MtrunA17_Chr5g0410501 38.760 258 134 8 300 541 39 288 4.73e-36 138
Msa0840960 MtrunA17_Chr5g0410561 41.364 220 119 6 60 277 3 214 8.66e-34 129
Msa0840960 MtrunA17_Chr3g0098301 29.773 309 206 5 426 726 88 393 1.34e-33 134
Msa0840960 MtrunA17_Chr2g0286561 37.209 172 101 1 541 712 14 178 1.56e-30 119
Msa0840960 MtrunA17_Chr5g0439061 32.890 301 193 6 439 734 437 733 1.40e-29 125
Msa0840960 MtrunA17_Chr3g0098531 30.638 235 158 3 498 728 48 281 1.99e-28 115
Msa0840960 MtrunA17_Chr5g0410551 52.336 107 48 2 439 544 1 105 8.16e-27 105
Msa0840960 MtrunA17_Chr5g0439081 34.973 183 116 2 542 723 16 196 9.59e-25 103
Msa0840960 MtrunA17_Chr1g0211541 31.395 258 161 6 438 684 218 470 2.87e-23 104
Msa0840960 MtrunA17_Chr1g0211541 25.902 305 194 12 128 419 6 291 3.50e-11 66.6
Msa0840960 MtrunA17_Chr5g0410441 46.296 108 52 3 454 557 1 106 1.67e-20 87.4
Msa0840960 MtrunA17_Chr5g0439051 32.990 194 127 3 542 734 20 211 5.82e-19 86.7
Msa0840960 MtrunA17_Chr1g0211511 28.571 224 152 4 430 651 8 225 8.96e-19 88.6
Msa0840960 MtrunA17_Chr3g0100921 43.089 123 69 1 591 712 2 124 9.45e-19 83.6
Msa0840960 MtrunA17_Chr1g0211531 30.263 228 145 5 430 651 231 450 1.08e-17 87.0
Msa0840960 MtrunA17_Chr2g0297521 43.529 85 47 1 534 618 1 84 1.97e-14 69.3
Msa0840960 MtrunA17_Chr3g0098541 29.381 194 115 6 153 334 9 192 2.36e-13 72.4
Msa0840960 MtrunA17_Chr6g0455841 28.230 209 119 8 458 664 6 185 8.97e-13 67.4
Msa0840960 MtrunA17_Chr2g0297611 39.759 83 49 1 556 638 9 90 1.12e-12 64.3
Msa0840960 MtrunA17_Chr2g0286571 25.893 224 143 8 116 331 4 212 5.29e-12 67.8
Msa0840960 MtrunA17_Chr3g0098291 31.217 189 112 7 151 332 56 233 1.71e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0840960 AT3G18670.2 35.494 648 366 15 97 730 29 638 3.26e-125 388
Msa0840960 AT5G04700.1 33.011 621 364 12 117 730 80 655 2.50e-86 286
Msa0840960 AT3G18670.1 34.906 530 305 11 219 730 76 583 6.07e-85 281
Msa0840960 AT3G18670.1 32.520 246 141 9 97 333 29 258 4.07e-28 120
Msa0840960 AT5G04690.2 32.268 626 375 11 108 730 66 645 2.51e-84 281
Msa0840960 AT5G04690.3 31.898 627 362 13 108 730 66 631 4.51e-80 269
Msa0840960 AT5G04690.1 30.990 626 349 11 108 730 66 611 1.07e-75 256
Msa0840960 AT5G04680.1 31.142 639 389 15 117 730 67 679 3.54e-73 251
Msa0840960 AT5G04680.4 30.952 630 373 14 117 730 67 650 1.94e-72 249
Msa0840960 AT5G04730.1 30.729 576 344 13 165 730 58 588 1.62e-71 244
Msa0840960 AT5G04680.2 31.746 567 327 13 178 730 7 527 3.17e-70 239
Msa0840960 AT5G04680.3 30.428 631 361 16 117 730 67 636 1.62e-67 235
Msa0840960 AT5G35810.1 38.614 303 177 4 439 734 35 335 4.63e-63 214
Msa0840960 AT3G54065.1 45.930 172 87 1 528 693 8 179 2.10e-44 160
Msa0840960 AT5G04700.2 27.378 431 263 10 117 542 80 465 3.44e-32 131
Msa0840960 AT3G54070.1 29.268 164 104 5 117 278 49 202 4.83e-14 73.2
Msa0840960 AT4G03500.2 26.217 267 167 8 442 688 298 554 6.98e-11 66.2
Msa0840960 AT4G03500.3 26.217 267 167 8 442 688 298 554 6.98e-11 66.2
Msa0840960 AT4G03500.1 26.217 267 167 8 442 688 321 577 7.22e-11 66.2

Find 150 sgRNAs with CRISPR-Local

Find 797 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATCTGGCTGGAAATTT+AGG 0.125517 5_4:-16849064 Msa0840960:CDS
AAGCTAACCCTGACCTATTA+TGG 0.190354 5_4:-16849231 Msa0840960:CDS
TACCAAACACTTTGCTATAT+TGG 0.211568 5_4:+16851599 None:intergenic
ATACATGATAAAACTGTAAA+TGG 0.215912 5_4:-16849136 Msa0840960:CDS
TTCACTTGCTATGCTCTTAA+AGG 0.220345 5_4:-16848381 Msa0840960:CDS
ACATATTCACATGTCATTTC+AGG 0.226779 5_4:-16850110 Msa0840960:CDS
GAATTCTAAAGCACATTAAT+TGG 0.237125 5_4:+16848131 None:intergenic
AACAACAAGTTAGTATATTT+TGG 0.238187 5_4:+16858112 None:intergenic
ATTTCTTCCAACCGAGTTCT+AGG 0.242650 5_4:+16851456 None:intergenic
CATGCGTGCCAATGCATATA+AGG 0.246329 5_4:+16851193 None:intergenic
TGTATCAATGCAGAAATATT+TGG 0.271929 5_4:-16851390 Msa0840960:intron
TGCATCTGGCTGGAAATTTA+GGG 0.279473 5_4:-16849063 Msa0840960:CDS
ATAAAATTTCTCTTTGCATT+TGG 0.280690 5_4:+16849002 None:intergenic
CACTAGCTCCTTGTGGCTTT+CGG 0.282604 5_4:+16848742 None:intergenic
GGTTTATTGAGAGCGGTAAT+TGG 0.301812 5_4:-16851830 Msa0840960:CDS
ATTCTCTAGAGCATTGTTCT+TGG 0.303183 5_4:-16848160 Msa0840960:three_prime_UTR
ATGCAAAAGCATTCATGAAT+AGG 0.306685 5_4:-16851803 Msa0840960:CDS
TCTTCTTTAGGAAGGATCTT+TGG 0.321301 5_4:-16850432 Msa0840960:intron
ACTTAAGCGGCAGAGACTTT+AGG 0.331258 5_4:+16848465 None:intergenic
CAAAAGATAACTACGATAAC+TGG 0.347471 5_4:-16858005 Msa0840960:CDS
TAACTAGTTGATAGTACATT+TGG 0.353307 5_4:+16848109 None:intergenic
ACTTCAGTCCTGCTATTCAT+TGG 0.354216 5_4:-16848521 Msa0840960:CDS
CTTCTCTGTGGTGTCCATGA+TGG 0.354652 5_4:-16848417 Msa0840960:CDS
ACTAATCAGTAAGTTTCATT+TGG 0.359252 5_4:+16848247 None:intergenic
TTTCAATTGGTGGACTCAAT+TGG 0.369033 5_4:+16858139 None:intergenic
CAGAGAAGAAAAGCATAATC+AGG 0.369758 5_4:+16848432 None:intergenic
AACAGGAATTTCACCATCAT+TGG 0.371227 5_4:+16851527 None:intergenic
TGATAATACCCTCTTGCATC+TGG 0.372207 5_4:-16849077 Msa0840960:CDS
TGTGACTTCTGTTTCTAGAA+TGG 0.372271 5_4:-16857935 Msa0840960:CDS
TATGTCATTTGCCAGTATTC+CGG 0.372475 5_4:-16848333 Msa0840960:CDS
TGTGGGCAAGTGGCAATTGC+GGG 0.384511 5_4:+16851252 None:intergenic
CTTCATGTTGCAGTGATTGC+TGG 0.392823 5_4:-16851735 Msa0840960:CDS
TGTATCAAATGTTGTTCTAA+AGG 0.394967 5_4:-16850909 Msa0840960:CDS
TTGGTTAGAAACTATCTTGC+GGG 0.400594 5_4:-16857976 Msa0840960:CDS
ACCTTGTTCAATGTCTGATT+CGG 0.401206 5_4:+16857744 None:intergenic
GTGACTTCTGTTTCTAGAAT+GGG 0.404219 5_4:-16857934 Msa0840960:CDS
TCAATAGCCCATAATAGGTC+AGG 0.405110 5_4:+16849223 None:intergenic
AAAGTGTTTGGTAGAGAAGA+AGG 0.405299 5_4:-16851589 Msa0840960:CDS
AAGAACAATCACCGGAATAC+TGG 0.406609 5_4:+16848322 None:intergenic
ATCTGATTCAGTTTCAGATT+CGG 0.409441 5_4:+16851226 None:intergenic
TTCCCAAGTGGCAATAGATA+TGG 0.413602 5_4:-16851161 Msa0840960:CDS
TTAGCAATATTAAAATTGTC+TGG 0.415689 5_4:-16850085 Msa0840960:intron
CTACGATAACTGGAGCTGTT+TGG 0.419207 5_4:-16857995 Msa0840960:CDS
AGCTCTTGTTGCTGAGTTGA+CGG 0.419239 5_4:-16851628 Msa0840960:CDS
TTCTGTTTCTAGAATGGGTG+TGG 0.422600 5_4:-16857929 Msa0840960:CDS
CATTTCTTTGTGTCCCTTAG+CGG 0.426364 5_4:+16851494 None:intergenic
TCACTTGCTATGCTCTTAAA+GGG 0.427681 5_4:-16848380 Msa0840960:CDS
CAGTTTCAGATTCGGATTTG+TGG 0.429263 5_4:+16851234 None:intergenic
TGGTGAAGGAAGGGAAAGAT+AGG 0.434543 5_4:-16851689 Msa0840960:CDS
TACCAATATAGCAAAGTGTT+TGG 0.435024 5_4:-16851601 Msa0840960:CDS
AAGAAGGGAGGGCAGGTAGT+TGG 0.435320 5_4:-16851573 Msa0840960:CDS
CTGTCTTGATTGTTTCCACC+AGG 0.436340 5_4:+16848623 None:intergenic
TGGAATTCCCCTCTTCTTGA+AGG 0.440116 5_4:-16848600 Msa0840960:CDS
TCTTGCGGGGCATGATCTGT+GGG 0.440551 5_4:-16857962 Msa0840960:CDS
ACAAGGAGCTAGTGAAAGTA+GGG 0.442213 5_4:-16848733 Msa0840960:CDS
TGTTCTTCTTGCAGCCGCTA+AGG 0.442297 5_4:-16851508 Msa0840960:CDS
TCTGATCTTCACCGAAGATC+TGG 0.442488 5_4:-16849034 Msa0840960:CDS
AGTTTCAGATTCGGATTTGT+GGG 0.445354 5_4:+16851235 None:intergenic
AATTTCGCAAGTACATCTCT+TGG 0.447154 5_4:-16850388 Msa0840960:CDS
TGCAAAAGCATTCATGAATA+GGG 0.450302 5_4:-16851802 Msa0840960:CDS
TTAGCGGCTGCAAGAAGAAC+AGG 0.452684 5_4:+16851510 None:intergenic
TCTCTTTGCATTTGGAGAGC+AGG 0.456333 5_4:+16849010 None:intergenic
AGCTAACCCTGACCTATTAT+GGG 0.458098 5_4:-16849230 Msa0840960:CDS
TATTTCTGCATTGATACATC+GGG 0.460797 5_4:+16851395 None:intergenic
GCTGCAGCTTTCACAGTCCC+TGG 0.462822 5_4:-16848641 Msa0840960:CDS
AATTGTTCACCCCAAGTGTA+AGG 0.470620 5_4:-16848807 Msa0840960:CDS
GGTAGAGAAGAAGGGAGGGC+AGG 0.472180 5_4:-16851580 Msa0840960:CDS
GGAGAGCAGGACCAGATCTT+CGG 0.475928 5_4:+16849023 None:intergenic
GTTCTTCTTGCAGCCGCTAA+GGG 0.477882 5_4:-16851507 Msa0840960:CDS
ATCTTGCGGGGCATGATCTG+TGG 0.479054 5_4:-16857963 Msa0840960:CDS
CAATTGGTGGACTCAATTGG+TGG 0.479065 5_4:+16858142 None:intergenic
TCAACTCAGCAACAAGAGCT+AGG 0.485261 5_4:+16851631 None:intergenic
GTGGCAATTGCGGGAATCGT+TGG 0.487167 5_4:+16851261 None:intergenic
ATCATACTGCTAAAGAAGCT+TGG 0.487331 5_4:-16857804 Msa0840960:CDS
GTGAAGAAATTGGTGAAGGA+AGG 0.488215 5_4:-16851699 Msa0840960:CDS
ATTTCGCAAGTACATCTCTT+GGG 0.489678 5_4:-16850387 Msa0840960:intron
AATACCCTCTTGCATCTGGC+TGG 0.489835 5_4:-16849073 Msa0840960:CDS
GCTCTTGTTGCTGAGTTGAC+GGG 0.490351 5_4:-16851627 Msa0840960:CDS
TACCGCTCTCAATAAACCTA+TGG 0.496198 5_4:+16851835 None:intergenic
AATTGAGTCCACCAATTGAA+AGG 0.497429 5_4:-16858137 Msa0840960:five_prime_UTR
AACGGCGCGTTATGCAGAAA+AGG 0.500771 5_4:-16848492 Msa0840960:CDS
ATATTTCTGCATTGATACAT+CGG 0.510537 5_4:+16851394 None:intergenic
ATCCATATCTATTGCCACTT+GGG 0.515490 5_4:+16851159 None:intergenic
CTTTAGGAAGGATCTTTGGA+TGG 0.516657 5_4:-16850428 Msa0840960:intron
ATGCGTGCCAATGCATATAA+GGG 0.517366 5_4:+16851194 None:intergenic
CACAAGGAGCTAGTGAAAGT+AGG 0.522348 5_4:-16848734 Msa0840960:CDS
TCTGTTTCTAGAATGGGTGT+GGG 0.532173 5_4:-16857928 Msa0840960:CDS
TTAGAATTCCAATGAATAGC+AGG 0.532264 5_4:+16848513 None:intergenic
CGTGCAACCCTTATATGCAT+TGG 0.533202 5_4:-16851201 Msa0840960:CDS
GTTTGGTAGAGAAGAAGGGA+GGG 0.534499 5_4:-16851584 Msa0840960:CDS
TTGTGGGCAAGTGGCAATTG+CGG 0.539731 5_4:+16851251 None:intergenic
AAGTGTTTGGTAGAGAAGAA+GGG 0.539988 5_4:-16851588 Msa0840960:CDS
TGTTTGGTAGAGAAGAAGGG+AGG 0.542467 5_4:-16851585 Msa0840960:CDS
CTACTTTCACTAGCTCCTTG+TGG 0.546091 5_4:+16848735 None:intergenic
AATCCATATCTATTGCCACT+TGG 0.556724 5_4:+16851158 None:intergenic
ATTGAGTCCACCAATTGAAA+GGG 0.559686 5_4:-16858136 Msa0840960:five_prime_UTR
GCAATAGATATGGATTCATA+CGG 0.560821 5_4:-16851151 Msa0840960:CDS
GCTATTCATTGGAATTCTAA+CGG 0.563684 5_4:-16848510 Msa0840960:CDS
TTTGGTTAGAAACTATCTTG+CGG 0.564125 5_4:-16857977 Msa0840960:CDS
TAAGGAATCTGAACTGAGAG+AGG 0.568722 5_4:-16849323 Msa0840960:CDS
CTCCATAGGTTTATTGAGAG+CGG 0.570313 5_4:-16851837 Msa0840960:CDS
GATTCGGATTTGTGGGCAAG+TGG 0.570721 5_4:+16851242 None:intergenic
AGTCCTTCCCGAAGAAGATG+TGG 0.573570 5_4:+16851761 None:intergenic
TGAAGAAATTGGTGAAGGAA+GGG 0.574748 5_4:-16851698 Msa0840960:CDS
CAACTCAAAACATCTTTCAC+AGG 0.575130 5_4:-16850881 Msa0840960:intron
AAATGGGCAAAAGATACAGC+TGG 0.580445 5_4:-16848707 Msa0840960:CDS
TTTCCACATCTTCTTCGGGA+AGG 0.582103 5_4:-16851764 Msa0840960:CDS
ATGCTCTTAAAGGGACATCA+AGG 0.582246 5_4:-16848371 Msa0840960:CDS
TTATCTATGAAGACCAATGA+TGG 0.582929 5_4:-16851540 Msa0840960:CDS
ATGGCAAGCATTGCAGCAAG+TGG 0.585270 5_4:-16858048 Msa0840960:CDS
AGCACAGAAAGCAACCATCA+TGG 0.585868 5_4:+16848403 None:intergenic
ATGTTGCAAGCAGCTAAGCA+TGG 0.587732 5_4:-16849283 Msa0840960:CDS
TTGCCACTTGGGAACACAGA+AGG 0.594143 5_4:+16851170 None:intergenic
CATATTATTCAACTAGCATG+CGG 0.594225 5_4:-16857856 Msa0840960:CDS
CAACTCAGCAACAAGAGCTA+GGG 0.594380 5_4:+16851632 None:intergenic
GAATCTGAAACTGAATCAGA+TGG 0.598732 5_4:-16851224 Msa0840960:CDS
ATGGAACAAGGATAATGCTA+AGG 0.602067 5_4:-16857884 Msa0840960:CDS
ATGATAAAACTGTAAATGGA+CGG 0.602518 5_4:-16849132 Msa0840960:CDS
TACTATCAACTAGTTACATG+TGG 0.603983 5_4:-16848102 Msa0840960:three_prime_UTR
AATTGTGAAGAAATTGGTGA+AGG 0.605805 5_4:-16851703 Msa0840960:CDS
TGTCTTGATTGTTTCCACCA+GGG 0.606616 5_4:+16848624 None:intergenic
CAATAGCCCATAATAGGTCA+GGG 0.609144 5_4:+16849224 None:intergenic
AGAGAAGAAAAGCATAATCA+GGG 0.609965 5_4:+16848433 None:intergenic
TAAAACTGTAAATGGACGGA+AGG 0.611261 5_4:-16849128 Msa0840960:CDS
TCAATATTTCAAGCACTAGA+CGG 0.613649 5_4:+16849374 None:intergenic
GGGTGTGGGATCTAAAGAAG+AGG 0.615454 5_4:-16857914 Msa0840960:CDS
ATGAAGAGTCGCAACTGTGA+AGG 0.615755 5_4:+16848296 None:intergenic
AGAGGTTGAAGCATGGAACA+AGG 0.619449 5_4:-16857896 Msa0840960:CDS
TTCACTATAGATCACTCCAT+AGG 0.620086 5_4:-16851851 Msa0840960:CDS
AGATCTTCGGTGAAGATCAG+AGG 0.623561 5_4:+16849036 None:intergenic
CTAAAGAAGAGGTTGAAGCA+TGG 0.624945 5_4:-16857903 Msa0840960:CDS
GAAGGTACAAGAACAATCAC+CGG 0.632232 5_4:+16848314 None:intergenic
ATGCCTTCTGTGTTCCCAAG+TGG 0.637179 5_4:-16851173 Msa0840960:CDS
GCAGCTTTCACAGTCCCTGG+TGG 0.637210 5_4:-16848638 Msa0840960:CDS
TGGTTAGAAACTATCTTGCG+GGG 0.637243 5_4:-16857975 Msa0840960:CDS
TATGGAGTGATCTATAGTGA+AGG 0.637838 5_4:+16851853 None:intergenic
AATTTCCAGCCAGATGCAAG+AGG 0.644750 5_4:+16849068 None:intergenic
GATATTTACCGAAAGCCACA+AGG 0.651211 5_4:-16848750 Msa0840960:CDS
CTTTCGGTAAATATCTCACG+AGG 0.651762 5_4:+16848758 None:intergenic
ATTTCCAGCCAGATGCAAGA+GGG 0.653848 5_4:+16849069 None:intergenic
CTTCGGTGAAGATCAGAGGA+AGG 0.655276 5_4:+16849040 None:intergenic
GAAAGCTGCAGCGAACATGA+TGG 0.660041 5_4:+16848652 None:intergenic
TTGAGTTCATAGATGCAATG+AGG 0.660248 5_4:-16849255 Msa0840960:CDS
CTTGCGGGGCATGATCTGTG+GGG 0.662424 5_4:-16857961 Msa0840960:CDS
GTGAAAATGAAAGACAATCG+TGG 0.663038 5_4:-16851663 Msa0840960:CDS
GGTGGAAACAATCAAGACAG+TGG 0.670462 5_4:-16848620 Msa0840960:CDS
TATATGATAGCATGCAACTG+AGG 0.676557 5_4:-16848192 Msa0840960:three_prime_UTR
GCCGAATCAGACATTGAACA+AGG 0.692799 5_4:-16857745 Msa0840960:intron
CAAGGAGCTAGTGAAAGTAG+GGG 0.713895 5_4:-16848732 Msa0840960:CDS
TTAGAAGCAAAACACCATTG+TGG 0.726643 5_4:+16851418 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTACAAAATATTAATACA+AGG - chr5_4:16848759-16848778 Msa0840960:CDS 10.0%
!! AGAATATGAAAATAAATAAA+GGG + chr5_4:16849015-16849034 None:intergenic 10.0%
!! TAGAATATGAAAATAAATAA+AGG + chr5_4:16849016-16849035 None:intergenic 10.0%
!!! TAAACATTTTTTTAGTTTTT+AGG - chr5_4:16849950-16849969 Msa0840960:intron 10.0%
!!! AAACATTTTTTTAGTTTTTA+GGG - chr5_4:16849951-16849970 Msa0840960:intron 10.0%
!! TAAAGTTTAATTAATGTTAA+TGG - chr5_4:16854908-16854927 Msa0840960:intron 10.0%
!!! AACTGTTAATTTAAAATTCA+AGG + chr5_4:16849155-16849174 None:intergenic 15.0%
!!! AACATTTTTTTAGTTTTTAG+GGG - chr5_4:16849952-16849971 Msa0840960:intron 15.0%
!!! CTATTAATTCAATTCTTTTA+GGG + chr5_4:16850411-16850430 None:intergenic 15.0%
!!! TCTATTAATTCAATTCTTTT+AGG + chr5_4:16850412-16850431 None:intergenic 15.0%
!! GAATTGAATTAATAGAAAAA+TGG - chr5_4:16850416-16850435 Msa0840960:CDS 15.0%
!! ATATAATACAGTAGAAAAAA+AGG - chr5_4:16852481-16852500 Msa0840960:intron 15.0%
!!! TTTTCTTTCTTTTTAAAGTT+TGG + chr5_4:16853560-16853579 None:intergenic 15.0%
!!! TAAAATATATGTTAATTTGC+AGG - chr5_4:16854354-16854373 Msa0840960:intron 15.0%
!!! GTCTATATCTTTTTTATTAT+CGG - chr5_4:16855140-16855159 Msa0840960:intron 15.0%
!!! ATATTTTTACTTTGCATTTA+TGG + chr5_4:16855183-16855202 None:intergenic 15.0%
!! TTTAATACAAGTATGATTTA+AGG - chr5_4:16855234-16855253 Msa0840960:intron 15.0%
!!! ATAAATTGTTTAATTTGCTA+TGG + chr5_4:16855746-16855765 None:intergenic 15.0%
!!! TTTTAATAACTTTCATTTAC+AGG - chr5_4:16856103-16856122 Msa0840960:intron 15.0%
!!! AACAACAAGTTAGTATATTT+TGG + chr5_4:16848139-16848158 None:intergenic 20.0%
!! ATGAAAATGAAAGACAAAAA+TGG + chr5_4:16848162-16848181 None:intergenic 20.0%
!! AAATTGAGAGATTAAATTGA+CGG + chr5_4:16848546-16848565 None:intergenic 20.0%
!!! GAAAAGTGATTGATAATTTA+TGG - chr5_4:16848685-16848704 Msa0840960:CDS 20.0%
!! AAGAAGTAAAGTGATAAAAA+TGG - chr5_4:16848820-16848839 Msa0840960:CDS 20.0%
!!! TAAAATATTTCTACAGTCTA+TGG - chr5_4:16848900-16848919 Msa0840960:intron 20.0%
!!! TAAATAAAGGGTGTTTAAAA+TGG + chr5_4:16849003-16849022 None:intergenic 20.0%
!!! TGATCTTTTATTTTTGTCTT+CGG + chr5_4:16849069-16849088 None:intergenic 20.0%
!!! CATTGAATTTTTTATATGCA+TGG + chr5_4:16849128-16849147 None:intergenic 20.0%
!! AGAGAGAAATATATGAAATA+AGG - chr5_4:16849316-16849335 Msa0840960:CDS 20.0%
!!! AATAAGGTATTAAATGACTA+AGG - chr5_4:16849332-16849351 Msa0840960:CDS 20.0%
!! TTAAAAAGTGACACTTAAAA+AGG - chr5_4:16849429-16849448 Msa0840960:intron 20.0%
!! AGTAACAGTCATAAAAATTA+AGG + chr5_4:16849669-16849688 None:intergenic 20.0%
!!! TTGATTTTTCATCTTGTTTT+AGG - chr5_4:16849859-16849878 Msa0840960:intron 20.0%
!! TTAAGAAAAAGTAAGAAAAG+TGG + chr5_4:16849933-16849952 None:intergenic 20.0%
!! TGGATTATATAATTCAAATC+AGG - chr5_4:16850149-16850168 Msa0840960:intron 20.0%
!! GGATTATATAATTCAAATCA+GGG - chr5_4:16850150-16850169 Msa0840960:intron 20.0%
!! GATTATATAATTCAAATCAG+GGG - chr5_4:16850151-16850170 Msa0840960:intron 20.0%
!! TTGAATTAATAGAAAAATGG+TGG - chr5_4:16850419-16850438 Msa0840960:CDS 20.0%
!!! TTGATAAAAAAAAGTATTGG+TGG + chr5_4:16850508-16850527 None:intergenic 20.0%
!!! GCTTTGATAAAAAAAAGTAT+TGG + chr5_4:16850511-16850530 None:intergenic 20.0%
!! AGCAATAAAATATAAAAGAC+AGG - chr5_4:16850528-16850547 Msa0840960:intron 20.0%
!! TTTATGTATCTCTATTGTAT+TGG + chr5_4:16850565-16850584 None:intergenic 20.0%
!! TGAAAGATATGAAAAAGTTT+GGG + chr5_4:16852144-16852163 None:intergenic 20.0%
!! ATGAAAGATATGAAAAAGTT+TGG + chr5_4:16852145-16852164 None:intergenic 20.0%
!!! TCTTTCTGTATTTTTTGTAT+TGG + chr5_4:16853040-16853059 None:intergenic 20.0%
!!! AAAATGTTATCATTTTTGTG+GGG + chr5_4:16853253-16853272 None:intergenic 20.0%
!!! CAAAATGTTATCATTTTTGT+GGG + chr5_4:16853254-16853273 None:intergenic 20.0%
!!! TCAAAATGTTATCATTTTTG+TGG + chr5_4:16853255-16853274 None:intergenic 20.0%
!!! AGTAGAAAACTTTTTAGATT+AGG + chr5_4:16853323-16853342 None:intergenic 20.0%
!!! TTATTAGGTACAATTTTCTT+GGG + chr5_4:16853439-16853458 None:intergenic 20.0%
!!! TTTATTAGGTACAATTTTCT+TGG + chr5_4:16853440-16853459 None:intergenic 20.0%
!! AATTGTACCTAATAAAATGA+TGG - chr5_4:16853444-16853463 Msa0840960:intron 20.0%
!! CATAACTCTTTATAAAAGAT+GGG + chr5_4:16854192-16854211 None:intergenic 20.0%
!!! ATATAGACTTACTTTTGTAA+AGG + chr5_4:16855128-16855147 None:intergenic 20.0%
!!! ATAAAAGTGCAAAACTTATA+TGG - chr5_4:16855304-16855323 Msa0840960:intron 20.0%
!!! TAAAAGTGCAAAACTTATAT+GGG - chr5_4:16855305-16855324 Msa0840960:intron 20.0%
!! TATATATATATATATGACGG+CGG + chr5_4:16855973-16855992 None:intergenic 20.0%
!! TTAGCAATATTAAAATTGTC+TGG - chr5_4:16856163-16856182 Msa0840960:intron 20.0%
!! AAGTAGTTATAACTTAGTAT+AGG - chr5_4:16856272-16856291 Msa0840960:intron 20.0%
!!! CTTTTCTACAACTTATTATA+TGG + chr5_4:16856695-16856714 None:intergenic 20.0%
!! ATAATAAGTTGTAGAAAAGT+AGG - chr5_4:16856696-16856715 Msa0840960:intron 20.0%
!! TAATAAGTTGTAGAAAAGTA+GGG - chr5_4:16856697-16856716 Msa0840960:intron 20.0%
!!! CCTTAAATTCTTGAATTTTT+TGG + chr5_4:16856910-16856929 None:intergenic 20.0%
!! CCAAAAAATTCAAGAATTTA+AGG - chr5_4:16856907-16856926 Msa0840960:intron 20.0%
!! ATACATGATAAAACTGTAAA+TGG - chr5_4:16857112-16857131 Msa0840960:intron 20.0%
!! ATAAAATTTCTCTTTGCATT+TGG + chr5_4:16857249-16857268 None:intergenic 20.0%
!!! AAATGCAAAGAGAAATTTTA+TGG - chr5_4:16857248-16857267 Msa0840960:intron 20.0%
!! TAACATAAGGTTTATCAAAT+AGG + chr5_4:16857343-16857362 None:intergenic 20.0%
!! AATCAAGATCTTATAACATA+AGG + chr5_4:16857356-16857375 None:intergenic 20.0%
!! TATGATAAAGTTTATATGCT+TGG + chr5_4:16857390-16857409 None:intergenic 20.0%
!! TAAACTTTATCATAGCATAA+TGG - chr5_4:16857396-16857415 Msa0840960:intron 20.0%
!! AAACTTTATCATAGCATAAT+GGG - chr5_4:16857397-16857416 Msa0840960:intron 20.0%
! AATCTCTCAATTTAATCCTT+TGG - chr5_4:16848553-16848572 Msa0840960:CDS 25.0%
! GATATCAGAGATTAAATTGA+CGG + chr5_4:16848581-16848600 None:intergenic 25.0%
! ATGGAAATGTGTTATAAACA+TGG + chr5_4:16848984-16849003 None:intergenic 25.0%
! TTCAAAAGTGACACTTAAAA+AGG + chr5_4:16849203-16849222 None:intergenic 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG + chr5_4:16849239-16849258 None:intergenic 25.0%
! TAAATAACTAAGGGTAATGT+TGG + chr5_4:16849290-16849309 None:intergenic 25.0%
! TTACCCTTAGTTATTTATTG+TGG - chr5_4:16849293-16849312 Msa0840960:CDS 25.0%
! TCTCCACAATAAATAACTAA+GGG + chr5_4:16849299-16849318 None:intergenic 25.0%
!!! TCTTGTTTTAGGCTATAAAT+AGG - chr5_4:16849870-16849889 Msa0840960:intron 25.0%
!!! AGATTTCAGATTTTAGAATC+CGG - chr5_4:16850106-16850125 Msa0840960:CDS 25.0%
! AAAATGCTAACAATCTAGTT+TGG - chr5_4:16850129-16850148 Msa0840960:intron 25.0%
!!! GTTTTGATTTGGTTTGATTT+GGG - chr5_4:16850253-16850272 Msa0840960:intron 25.0%
!!! TTTGATTTGGGTATGAATTT+GGG - chr5_4:16850265-16850284 Msa0840960:intron 25.0%
!!! AATTTGGGTTTTCTTTGATT+TGG - chr5_4:16850280-16850299 Msa0840960:intron 25.0%
! TATTCACACGATTAAATGTT+TGG + chr5_4:16850337-16850356 None:intergenic 25.0%
!!! ATTCAATTCTTTTAGGGTAT+AGG + chr5_4:16850405-16850424 None:intergenic 25.0%
!! AAATGGTGGAAATTAATTTC+TGG - chr5_4:16850433-16850452 Msa0840960:intron 25.0%
!! TATGGTTTGTGTTATAAGTT+TGG - chr5_4:16850464-16850483 Msa0840960:intron 25.0%
!! ATGGTTTGTGTTATAAGTTT+GGG - chr5_4:16850465-16850484 Msa0840960:intron 25.0%
! TAAAATATAAAAGACAGGAG+AGG - chr5_4:16850533-16850552 Msa0840960:intron 25.0%
! AAACTTATGAAAAGAGAAAC+CGG - chr5_4:16850588-16850607 Msa0840960:intron 25.0%
!!! TTGACTAGTTTTTTGTACAA+TGG + chr5_4:16850663-16850682 None:intergenic 25.0%
! CTAATTGCATTTGAATATCT+GGG + chr5_4:16850707-16850726 None:intergenic 25.0%
! TCTAATTGCATTTGAATATC+TGG + chr5_4:16850708-16850727 None:intergenic 25.0%
! ATAGAAATTGTTTGCTCATT+GGG + chr5_4:16851306-16851325 None:intergenic 25.0%
! TATAGAAATTGTTTGCTCAT+TGG + chr5_4:16851307-16851326 None:intergenic 25.0%
! AATGAGCAAACAATTTCTAT+AGG - chr5_4:16851306-16851325 Msa0840960:intron 25.0%
! CATTGGAATCATTGATATTT+AGG - chr5_4:16851370-16851389 Msa0840960:intron 25.0%
! TGATATTTAGGTCTAGTAAA+AGG - chr5_4:16851382-16851401 Msa0840960:intron 25.0%
! TTAATCTGTTCACTTCTTTA+GGG + chr5_4:16851428-16851447 None:intergenic 25.0%
! TTTAATCTGTTCACTTCTTT+AGG + chr5_4:16851429-16851448 None:intergenic 25.0%
!!! AGCCTTATTTTTAGATTGAA+GGG - chr5_4:16851605-16851624 Msa0840960:CDS 25.0%
! TTAAGAAATTTCAAAGAGTG+TGG - chr5_4:16851978-16851997 Msa0840960:intron 25.0%
! AAATGTTGAAATTCTTCAGT+TGG + chr5_4:16852095-16852114 None:intergenic 25.0%
! TCAAAATACCCTTTACATAA+CGG - chr5_4:16852181-16852200 Msa0840960:intron 25.0%
!!! TGTATTTTTTGTATTGGTAG+AGG + chr5_4:16853034-16853053 None:intergenic 25.0%
!! TAGTTTGAAATACTATTGTG+TGG + chr5_4:16853292-16853311 None:intergenic 25.0%
! ACACAATAGTATTTCAAACT+AGG - chr5_4:16853291-16853310 Msa0840960:intron 25.0%
! ATGTGTGATATTATGTCTTT+AGG + chr5_4:16853415-16853434 None:intergenic 25.0%
!! TATGTGTCCATCATTTTATT+AGG + chr5_4:16853454-16853473 None:intergenic 25.0%
!!! TTTTAGAGGATGTATCTTTA+TGG + chr5_4:16853846-16853865 None:intergenic 25.0%
! ATATTGTTAGACATCATAGA+AGG + chr5_4:16854041-16854060 None:intergenic 25.0%
!!! ATCCTTTTTTTTCTTCTTTC+CGG + chr5_4:16854132-16854151 None:intergenic 25.0%
! CCATAACTCTTTATAAAAGA+TGG + chr5_4:16854193-16854212 None:intergenic 25.0%
!! CCATCTTTTATAAAGAGTTA+TGG - chr5_4:16854190-16854209 Msa0840960:intron 25.0%
! CGAAAAAATTGTGAAGAAAT+TGG - chr5_4:16854539-16854558 Msa0840960:intron 25.0%
! ACAGATAAAAATTTCCACAA+TGG - chr5_4:16854816-16854835 Msa0840960:intron 25.0%
!! ATATTTCTGCATTGATACAT+CGG + chr5_4:16854857-16854876 None:intergenic 25.0%
! TGTATCAATGCAGAAATATT+TGG - chr5_4:16854858-16854877 Msa0840960:intron 25.0%
! ACTGAATCAAATATATGTCA+CGG + chr5_4:16854888-16854907 None:intergenic 25.0%
! TTACTTTGCATTTATGGTAA+TGG + chr5_4:16855177-16855196 None:intergenic 25.0%
! AAATATACTAGTGTTTCCTA+TGG - chr5_4:16855197-16855216 Msa0840960:intron 25.0%
! TGTATCAAATGTTGTTCTAA+AGG - chr5_4:16855339-16855358 Msa0840960:intron 25.0%
! CCTAAAAAAAACTTGATGAA+AGG + chr5_4:16855552-16855571 None:intergenic 25.0%
!!! CCTTTCATCAAGTTTTTTTT+AGG - chr5_4:16855549-16855568 Msa0840960:intron 25.0%
!! AGATTTAGAACATTTCATTC+AGG + chr5_4:16855787-16855806 None:intergenic 25.0%
! AATAACTTTCATTTACAGGT+CGG - chr5_4:16856107-16856126 Msa0840960:intron 25.0%
!! GTAATGTGTTTTCATAATGA+TGG - chr5_4:16856304-16856323 Msa0840960:intron 25.0%
! TAAAATGCCAAACTTGAATT+TGG + chr5_4:16856524-16856543 None:intergenic 25.0%
!! TTTTATCAATAGCCCATAAT+AGG + chr5_4:16857033-16857052 None:intergenic 25.0%
! GCTATTGATAAAAATAAGAG+AGG - chr5_4:16857040-16857059 Msa0840960:intron 25.0%
! ATGATAAAACTGTAAATGGA+CGG - chr5_4:16857116-16857135 Msa0840960:intron 25.0%
!! AAGAGAAATTTTATGGTTTC+AGG - chr5_4:16857255-16857274 Msa0840960:intron 25.0%
!! CTTCTTATCTTCTACATTTT+TGG + chr5_4:16857470-16857489 None:intergenic 25.0%
! ACTAATCAGTAAGTTTCATT+TGG + chr5_4:16858004-16858023 None:intergenic 25.0%
!!! GAATTCTAAAGCACATTAAT+TGG + chr5_4:16858120-16858139 None:intergenic 25.0%
!!! TAACTAGTTGATAGTACATT+TGG + chr5_4:16858142-16858161 None:intergenic 25.0%
!!! ATATTTTGGTCCCTTTCAAT+TGG + chr5_4:16848125-16848144 None:intergenic 30.0%
TCATCCAGAATCAGAAAAAA+TGG - chr5_4:16848181-16848200 Msa0840960:three_prime_UTR 30.0%
! TCGTAGTTATCTTTTGTTAG+TGG + chr5_4:16848239-16848258 None:intergenic 30.0%
CAAAAGATAACTACGATAAC+TGG - chr5_4:16848243-16848262 Msa0840960:exon 30.0%
TTTGGTTAGAAACTATCTTG+CGG - chr5_4:16848271-16848290 Msa0840960:CDS 30.0%
CATATTATTCAACTAGCATG+CGG - chr5_4:16848392-16848411 Msa0840960:CDS 30.0%
ATATGTCAATTCGTAAGTAC+AGG + chr5_4:16848611-16848630 None:intergenic 30.0%
! GATATAAGAAGTGAGACTTT+TGG - chr5_4:16848781-16848800 Msa0840960:CDS 30.0%
TAGAATATGCTATTAGCTCA+TGG - chr5_4:16848926-16848945 Msa0840960:intron 30.0%
AGAATATGCTATTAGCTCAT+GGG - chr5_4:16848927-16848946 Msa0840960:intron 30.0%
ATGTGTTATAAACATGGACA+TGG + chr5_4:16848978-16848997 None:intergenic 30.0%
AAGTGACACTTAAAAAGGAA+CGG + chr5_4:16849434-16849453 None:intergenic 30.0%
CTCTCCACAATAAATAACTA+AGG + chr5_4:16849300-16849319 None:intergenic 30.0%
GTAACATTTATTGAGTGTCT+TGG - chr5_4:16849393-16849412 Msa0840960:CDS 30.0%
AAGTGACACTTAAAAAGGAA+CGG - chr5_4:16849434-16849453 Msa0840960:intron 30.0%
AACGGAGGTAATTATTCTTT+GGG - chr5_4:16849452-16849471 Msa0840960:intron 30.0%
TTACATTCATTCCACATCTT+TGG - chr5_4:16849536-16849555 Msa0840960:intron 30.0%
!! ATGAAGGAATTTGTTGAAGA+TGG + chr5_4:16849899-16849918 None:intergenic 30.0%
!!! TTAGTTTTTAGGGGTGTTTA+TGG - chr5_4:16849961-16849980 Msa0840960:intron 30.0%
AGTGTTGTATTTGATGTCAA+AGG + chr5_4:16850070-16850089 None:intergenic 30.0%
! ACTAGATTGTTAGCATTTTC+CGG + chr5_4:16850128-16850147 None:intergenic 30.0%
!!! CAGGTTTTTACGTTTTGATT+TGG - chr5_4:16850242-16850261 Msa0840960:intron 30.0%
!!! CGTTTTGATTTGGTTTGATT+TGG - chr5_4:16850252-16850271 Msa0840960:intron 30.0%
!! GTTTGATTTGGGTATGAATT+TGG - chr5_4:16850264-16850283 Msa0840960:intron 30.0%
!! TATCTCAAAAGTATTCAGCT+GGG + chr5_4:16850311-16850330 None:intergenic 30.0%
!! ATATCTCAAAAGTATTCAGC+TGG + chr5_4:16850312-16850331 None:intergenic 30.0%
!! GGAAATTAATTTCTGGTAGA+AGG - chr5_4:16850440-16850459 Msa0840960:intron 30.0%
!! TAATTTCTGGTAGAAGGTTA+TGG - chr5_4:16850446-16850465 Msa0840960:intron 30.0%
CTTGGTAGATATACAATAGT+TGG + chr5_4:16850731-16850750 None:intergenic 30.0%
CAACTATTGTATATCTACCA+AGG - chr5_4:16850729-16850748 Msa0840960:intron 30.0%
! AGATTCTTTCGAAATTTTGG+GGG + chr5_4:16850957-16850976 None:intergenic 30.0%
! CAGATTCTTTCGAAATTTTG+GGG + chr5_4:16850958-16850977 None:intergenic 30.0%
! GCAGATTCTTTCGAAATTTT+GGG + chr5_4:16850959-16850978 None:intergenic 30.0%
! TGCAGATTCTTTCGAAATTT+TGG + chr5_4:16850960-16850979 None:intergenic 30.0%
AGTTATCAAATTAGCATAGC+TGG - chr5_4:16851056-16851075 Msa0840960:intron 30.0%
ATATCAATGATTCCAATGCA+GGG + chr5_4:16851368-16851387 None:intergenic 30.0%
AATATCAATGATTCCAATGC+AGG + chr5_4:16851369-16851388 None:intergenic 30.0%
TAATCTGTTCACTTCTTTAG+GGG + chr5_4:16851427-16851446 None:intergenic 30.0%
!!! CAGCCTTATTTTTAGATTGA+AGG - chr5_4:16851604-16851623 Msa0840960:CDS 30.0%
CTCCCTTCAATCTAAAAATA+AGG + chr5_4:16851610-16851629 None:intergenic 30.0%
!!! TATCTTTTTTGTCACATGCT+TGG - chr5_4:16851632-16851651 Msa0840960:CDS 30.0%
ACAAAATCTCAATTCAACCT+TGG + chr5_4:16851726-16851745 None:intergenic 30.0%
CTCTAATATTCAACAACAAC+CGG - chr5_4:16851816-16851835 Msa0840960:CDS 30.0%
TCTAATATTCAACAACAACC+GGG - chr5_4:16851817-16851836 Msa0840960:CDS 30.0%
TATGAAAAAGTTTGGGCATT+GGG + chr5_4:16852137-16852156 None:intergenic 30.0%
ATATGAAAAAGTTTGGGCAT+TGG + chr5_4:16852138-16852157 None:intergenic 30.0%
!!! AGACGTGTTGTTTTACATAA+AGG + chr5_4:16852286-16852305 None:intergenic 30.0%
TATGTAAAACAACACGTCTA+TGG - chr5_4:16852287-16852306 Msa0840960:intron 30.0%
!! ATTATATCCTTTTGCTGGTT+CGG + chr5_4:16852468-16852487 None:intergenic 30.0%
! ACTGTATTATATCCTTTTGC+TGG + chr5_4:16852473-16852492 None:intergenic 30.0%
! CATCCTCAAACACATATTTT+CGG + chr5_4:16852962-16852981 None:intergenic 30.0%
ATTTGATCTTATCCACCAAA+TGG - chr5_4:16853210-16853229 Msa0840960:intron 30.0%
!!! AAGTTTTTTCGTCTTACGTT+AGG + chr5_4:16853353-16853372 None:intergenic 30.0%
ATTATGTCTTTAGGTGGTTA+GGG + chr5_4:16853406-16853425 None:intergenic 30.0%
TATTATGTCTTTAGGTGGTT+AGG + chr5_4:16853407-16853426 None:intergenic 30.0%
TGTGATATTATGTCTTTAGG+TGG + chr5_4:16853412-16853431 None:intergenic 30.0%
AGAAAATGGTGTTTCTTATG+TGG + chr5_4:16853586-16853605 None:intergenic 30.0%
TTGCGAAATTCTCAAGAAAA+TGG + chr5_4:16853600-16853619 None:intergenic 30.0%
TCGCAACACATTAGAATAAA+AGG - chr5_4:16853614-16853633 Msa0840960:intron 30.0%
TGATTCTTTCGGTAGTTATA+TGG + chr5_4:16853646-16853665 None:intergenic 30.0%
CTCTAAGTTCATCAATCTAA+GGG - chr5_4:16853894-16853913 Msa0840960:intron 30.0%
! CTTCATAAGCATTTTTCCAT+GGG + chr5_4:16854007-16854026 None:intergenic 30.0%
! ACTTCATAAGCATTTTTCCA+TGG + chr5_4:16854008-16854027 None:intergenic 30.0%
GAGTTAAAAACTCTATTCAC+CGG - chr5_4:16854110-16854129 Msa0840960:intron 30.0%
CTCTTTATAAAAGATGGGTA+CGG + chr5_4:16854187-16854206 None:intergenic 30.0%
ATTATTACGTGTTAGTACGT+TGG - chr5_4:16854222-16854241 Msa0840960:intron 30.0%
TTATTACGTGTTAGTACGTT+GGG - chr5_4:16854223-16854242 Msa0840960:intron 30.0%
! ATAGTATCACTAGTGTGTTT+TGG + chr5_4:16854257-16854276 None:intergenic 30.0%
!! TATATGTTAATTTGCAGGTG+TGG - chr5_4:16854359-16854378 Msa0840960:intron 30.0%
!! ATGCAAAAGCATTCATGAAT+AGG - chr5_4:16854445-16854464 Msa0840960:intron 30.0%
!! TGCAAAAGCATTCATGAATA+GGG - chr5_4:16854446-16854465 Msa0840960:intron 30.0%
! TATGTTTTCCACATCTTCTT+CGG - chr5_4:16854479-16854498 Msa0840960:intron 30.0%
AATTGTGAAGAAATTGGTGA+AGG - chr5_4:16854545-16854564 Msa0840960:intron 30.0%
! TACCAATATAGCAAAGTGTT+TGG - chr5_4:16854647-16854666 Msa0840960:intron 30.0%
! TACCAAACACTTTGCTATAT+TGG + chr5_4:16854652-16854671 None:intergenic 30.0%
TTATCTATGAAGACCAATGA+TGG - chr5_4:16854708-16854727 Msa0840960:intron 30.0%
! GTTATCTTTTTCCTAGAACT+CGG - chr5_4:16854781-16854800 Msa0840960:intron 30.0%
! TATTTCTGCATTGATACATC+GGG + chr5_4:16854856-16854875 None:intergenic 30.0%
ATGCTGATATGTTGTCAATT+AGG - chr5_4:16854946-16854965 Msa0840960:intron 30.0%
ATCTGATTCAGTTTCAGATT+CGG + chr5_4:16855025-16855044 None:intergenic 30.0%
GCAATAGATATGGATTCATA+CGG - chr5_4:16855097-16855116 Msa0840960:intron 30.0%
! AAGTTTTGCACTTTTATGTC+TGG + chr5_4:16855301-16855320 None:intergenic 30.0%
TAGAACATTTCATTCAGGTA+TGG + chr5_4:16855782-16855801 None:intergenic 30.0%
TCTTACTCTCTTTCTTCTTT+AGG - chr5_4:16855804-16855823 Msa0840960:intron 30.0%
! ACATATTCACATGTCATTTC+AGG - chr5_4:16856138-16856157 Msa0840960:intron 30.0%
!!! TTTTTTCCTTATGTATCAGC+TGG - chr5_4:16856223-16856242 Msa0840960:intron 30.0%
! TGTTTTCATAATGATGGCTA+TGG - chr5_4:16856310-16856329 Msa0840960:intron 30.0%
TTGGCTTATAACAAACACAT+TGG + chr5_4:16856412-16856431 None:intergenic 30.0%
!! ATGTGTTTGTTATAAGCCAA+TGG - chr5_4:16856412-16856431 Msa0840960:intron 30.0%
!! TGTGTTTGTTATAAGCCAAT+GGG - chr5_4:16856413-16856432 Msa0840960:intron 30.0%
ATATGGTAGCACTTTACTTT+GGG + chr5_4:16856678-16856697 None:intergenic 30.0%
TATATGGTAGCACTTTACTT+TGG + chr5_4:16856679-16856698 None:intergenic 30.0%
AAACACATACTACTTTGTTC+CGG + chr5_4:16856741-16856760 None:intergenic 30.0%
! ATTGCTGTTCATCATAGAAT+TGG + chr5_4:16856824-16856843 None:intergenic 30.0%
TCAATATTTCAAGCACTAGA+CGG + chr5_4:16856877-16856896 None:intergenic 30.0%
!! CAGTTTTATCATGTATGAGT+TGG + chr5_4:16857108-16857127 None:intergenic 30.0%
! AGGTTCTGATGAATAAACTA+TGG + chr5_4:16857323-16857342 None:intergenic 30.0%
TTAGAATTCCAATGAATAGC+AGG + chr5_4:16857738-16857757 None:intergenic 30.0%
GCTATTCATTGGAATTCTAA+CGG - chr5_4:16857738-16857757 Msa0840960:intron 30.0%
! AGAGAAGAAAAGCATAATCA+GGG + chr5_4:16857818-16857837 None:intergenic 30.0%
TACTATCAACTAGTTACATG+TGG - chr5_4:16858146-16858165 Msa0840960:five_prime_UTR 30.0%
!! TTTCAATTGGTGGACTCAAT+TGG + chr5_4:16848112-16848131 None:intergenic 35.0%
AATTGAGTCCACCAATTGAA+AGG - chr5_4:16848111-16848130 Msa0840960:three_prime_UTR 35.0%
ATTGAGTCCACCAATTGAAA+GGG - chr5_4:16848112-16848131 Msa0840960:three_prime_UTR 35.0%
!!! CTTGCCATTTTTTCTGATTC+TGG + chr5_4:16848188-16848207 None:intergenic 35.0%
TTGGTTAGAAACTATCTTGC+GGG - chr5_4:16848272-16848291 Msa0840960:CDS 35.0%
!! TGTGACTTCTGTTTCTAGAA+TGG - chr5_4:16848313-16848332 Msa0840960:CDS 35.0%
!! GTGACTTCTGTTTCTAGAAT+GGG - chr5_4:16848314-16848333 Msa0840960:CDS 35.0%
ATGGAACAAGGATAATGCTA+AGG - chr5_4:16848364-16848383 Msa0840960:CDS 35.0%
ATCATACTGCTAAAGAAGCT+TGG - chr5_4:16848444-16848463 Msa0840960:CDS 35.0%
ACCTTGTTCAATGTCTGATT+CGG + chr5_4:16848507-16848526 None:intergenic 35.0%
! GATTAAATTGACGGATCCAA+AGG + chr5_4:16848572-16848591 None:intergenic 35.0%
ATTTCCACCTACGGTAAATA+AGG - chr5_4:16848854-16848873 Msa0840960:intron 35.0%
GAACGGAGGTAATTATTCTT+TGG - chr5_4:16849451-16849470 Msa0840960:intron 35.0%
AATACTTCGTACCAAAGATG+TGG + chr5_4:16849550-16849569 None:intergenic 35.0%
!! AGTTGACTTTTGAAAGTGCA+AGG - chr5_4:16849578-16849597 Msa0840960:intron 35.0%
!! GTTGACTTTTGAAAGTGCAA+GGG - chr5_4:16849579-16849598 Msa0840960:intron 35.0%
!! AGCAACTCTGGTTTCTTTTA+GGG - chr5_4:16849623-16849642 Msa0840960:intron 35.0%
!! GGGTTTGGTCATTAACTTTT+TGG - chr5_4:16849643-16849662 Msa0840960:intron 35.0%
!!! ACTGTTACTTTTTCCACCAT+GGG - chr5_4:16849680-16849699 Msa0840960:intron 35.0%
!!! TATCTTTTTTGAAGAGCGTG+TGG - chr5_4:16850180-16850199 Msa0840960:intron 35.0%
!!! ATCTTTTTTGAAGAGCGTGT+GGG - chr5_4:16850181-16850200 Msa0840960:intron 35.0%
AAAACCTGTCAAATTGTGGT+GGG + chr5_4:16850230-16850249 None:intergenic 35.0%
AAAAACCTGTCAAATTGTGG+TGG + chr5_4:16850231-16850250 None:intergenic 35.0%
CGTAAAAACCTGTCAAATTG+TGG + chr5_4:16850234-16850253 None:intergenic 35.0%
ACTGAGAAATACTATGATGC+TGG - chr5_4:16850372-16850391 Msa0840960:intron 35.0%
CTGAGAAATACTATGATGCT+GGG - chr5_4:16850373-16850392 Msa0840960:intron 35.0%
TTCCTTTCTTAGGATAGATC+CGG + chr5_4:16850610-16850629 None:intergenic 35.0%
ATCAGGTCATTTCCTTTCTT+AGG + chr5_4:16850620-16850639 None:intergenic 35.0%
TCTTTGACATCTGTTTCATC+AGG + chr5_4:16850637-16850656 None:intergenic 35.0%
ATATCTGGGAATGTCAAGAA+TGG + chr5_4:16850693-16850712 None:intergenic 35.0%
CTATTGTATATCTACCAAGG+CGG - chr5_4:16850732-16850751 Msa0840960:intron 35.0%
!! ACATTATTAGCCTTGACAAG+AGG + chr5_4:16850900-16850919 None:intergenic 35.0%
! GATTCTTTCGAAATTTTGGG+GGG + chr5_4:16850956-16850975 None:intergenic 35.0%
AAGAATCTGCACACTCTTTA+AGG - chr5_4:16850969-16850988 Msa0840960:intron 35.0%
!! TCTTTAAGGTTGCAACAGAA+TGG - chr5_4:16850983-16851002 Msa0840960:intron 35.0%
!! CTTTAAGGTTGCAACAGAAT+GGG - chr5_4:16850984-16851003 Msa0840960:intron 35.0%
! TTTAAGGTTGCAACAGAATG+GGG - chr5_4:16850985-16851004 Msa0840960:intron 35.0%
TTAGCATAGCTGGTAGTTAT+AGG - chr5_4:16851066-16851085 Msa0840960:intron 35.0%
! TAGCATTGTTGTTAGAGTTG+TGG + chr5_4:16851148-16851167 None:intergenic 35.0%
! CAAAGTTACATTTGCTGGTT+TGG + chr5_4:16851661-16851680 None:intergenic 35.0%
AACCAGCAAATGTAACTTTG+TGG - chr5_4:16851661-16851680 Msa0840960:CDS 35.0%
TGTTGTGAAGATTGATGTGT+GGG - chr5_4:16851684-16851703 Msa0840960:CDS 35.0%
AATGTCCTATCATCTTGCAA+TGG - chr5_4:16851775-16851794 Msa0840960:CDS 35.0%
ATGTCCTATCATCTTGCAAT+GGG - chr5_4:16851776-16851795 Msa0840960:CDS 35.0%
! CGGTTGTTGTTGAATATTAG+AGG + chr5_4:16851818-16851837 None:intergenic 35.0%
!!! TCTTTTTGAGTCTATGATCG+TGG + chr5_4:16851862-16851881 None:intergenic 35.0%
CCATAACTCCGTTATGTAAA+GGG + chr5_4:16852192-16852211 None:intergenic 35.0%
TCCATAACTCCGTTATGTAA+AGG + chr5_4:16852193-16852212 None:intergenic 35.0%
AGCAGAAGCTTGATGAATTA+TGG + chr5_4:16852234-16852253 None:intergenic 35.0%
! CTTTGGTTATTTGGCTTCAT+CGG + chr5_4:16852540-16852559 None:intergenic 35.0%
!!! CTTCTGGGTGGTTTTTTTTT+TGG + chr5_4:16852831-16852850 None:intergenic 35.0%
!! TTATTTCTAACACTTCTGGG+TGG + chr5_4:16852843-16852862 None:intergenic 35.0%
!! GCGTTATTTCTAACACTTCT+GGG + chr5_4:16852846-16852865 None:intergenic 35.0%
CTCTCTGTGATATACTCTTA+TGG + chr5_4:16852868-16852887 None:intergenic 35.0%
! TAAGAGTATATCACAGAGAG+AGG - chr5_4:16852868-16852887 Msa0840960:intron 35.0%
AAGAAGATCACTTGAATCGA+GGG - chr5_4:16852894-16852913 Msa0840960:intron 35.0%
CGAAAATATGTGTTTGAGGA+TGG - chr5_4:16852960-16852979 Msa0840960:intron 35.0%
ATGTGCATCTCACTTATAGA+TGG - chr5_4:16853139-16853158 Msa0840960:intron 35.0%
!! AACATTTTGAGTCTTCCAGA+TGG - chr5_4:16853265-16853284 Msa0840960:intron 35.0%
! TAGGCATCCTATCTTTGAAA+GGG - chr5_4:16853523-16853542 Msa0840960:intron 35.0%
AGATCTTTAGCGTTAGCTAA+AGG + chr5_4:16853723-16853742 None:intergenic 35.0%
TTATGATGTAGGATCTTGGT+TGG + chr5_4:16853772-16853791 None:intergenic 35.0%
TCAGTTATGATGTAGGATCT+TGG + chr5_4:16853776-16853795 None:intergenic 35.0%
CTAAAGAGGCAAAGTTGTTA+AGG + chr5_4:16853807-16853826 None:intergenic 35.0%
TGATATTCTCCTAGCTAAAG+AGG + chr5_4:16853821-16853840 None:intergenic 35.0%
TTGATGAACTTAGAGGTCTT+GGG + chr5_4:16853889-16853908 None:intergenic 35.0%
ATTGATGAACTTAGAGGTCT+TGG + chr5_4:16853890-16853909 None:intergenic 35.0%
CCTTAGATTGATGAACTTAG+AGG + chr5_4:16853896-16853915 None:intergenic 35.0%
CCTCTAAGTTCATCAATCTA+AGG - chr5_4:16853893-16853912 Msa0840960:intron 35.0%
AGTCTAGTGTTTGTAAGACT+CGG + chr5_4:16853944-16853963 None:intergenic 35.0%
TAGACATCATAGAAGGAGAT+CGG + chr5_4:16854034-16854053 None:intergenic 35.0%
AATCTCAGTAGGTGTCTTAA+AGG + chr5_4:16854064-16854083 None:intergenic 35.0%
!! TCTTTTCTGAGAATCTCAGT+AGG + chr5_4:16854075-16854094 None:intergenic 35.0%
CACCGGAAAGAAGAAAAAAA+AGG - chr5_4:16854127-16854146 Msa0840960:intron 35.0%
TATGGAGTGATCTATAGTGA+AGG + chr5_4:16854398-16854417 None:intergenic 35.0%
TTCACTATAGATCACTCCAT+AGG - chr5_4:16854397-16854416 Msa0840960:intron 35.0%
! ATGTTTTCCACATCTTCTTC+GGG - chr5_4:16854480-16854499 Msa0840960:intron 35.0%
TGAAGAAATTGGTGAAGGAA+GGG - chr5_4:16854550-16854569 Msa0840960:intron 35.0%
GTGAAAATGAAAGACAATCG+TGG - chr5_4:16854585-16854604 Msa0840960:intron 35.0%
! AAAGTGTTTGGTAGAGAAGA+AGG - chr5_4:16854659-16854678 Msa0840960:intron 35.0%
AAGTGTTTGGTAGAGAAGAA+GGG - chr5_4:16854660-16854679 Msa0840960:intron 35.0%
AACAGGAATTTCACCATCAT+TGG + chr5_4:16854724-16854743 None:intergenic 35.0%
TTAGAAGCAAAACACCATTG+TGG + chr5_4:16854833-16854852 None:intergenic 35.0%
GATATGTTGTCAATTAGGTG+TGG - chr5_4:16854951-16854970 Msa0840960:intron 35.0%
AGTTTCAGATTCGGATTTGT+GGG + chr5_4:16855016-16855035 None:intergenic 35.0%
! GAATCTGAAACTGAATCAGA+TGG - chr5_4:16855024-16855043 Msa0840960:intron 35.0%
! ATCCATATCTATTGCCACTT+GGG + chr5_4:16855092-16855111 None:intergenic 35.0%
AATCCATATCTATTGCCACT+TGG + chr5_4:16855093-16855112 None:intergenic 35.0%
AATATACCCAATCTGTCCAT+AGG + chr5_4:16855216-16855235 None:intergenic 35.0%
CAACTCAAAACATCTTTCAC+AGG - chr5_4:16855367-16855386 Msa0840960:intron 35.0%
CAAAACATCTTTCACAGGTA+TGG - chr5_4:16855372-16855391 Msa0840960:intron 35.0%
AAGACAAGACATTGTCTTTG+TGG - chr5_4:16855575-16855594 Msa0840960:intron 35.0%
GAAGACAAATGTTTCTTGCA+GGG + chr5_4:16855601-16855620 None:intergenic 35.0%
AGAAGACAAATGTTTCTTGC+AGG + chr5_4:16855602-16855621 None:intergenic 35.0%
CTTTGCATGTTATGCTAATC+TGG - chr5_4:16855678-16855697 Msa0840960:intron 35.0%
CATGTTATGCTAATCTGGAA+CGG - chr5_4:16855683-16855702 Msa0840960:intron 35.0%
! ACTCTCTTTCTTCTTTAGGA+AGG - chr5_4:16855808-16855827 Msa0840960:intron 35.0%
! TCTTCTTTAGGAAGGATCTT+TGG - chr5_4:16855816-16855835 Msa0840960:intron 35.0%
AATTTCGCAAGTACATCTCT+TGG - chr5_4:16855860-16855879 Msa0840960:intron 35.0%
ATTTCGCAAGTACATCTCTT+GGG - chr5_4:16855861-16855880 Msa0840960:intron 35.0%
! TAGGTAGTTTTCGATTCTCA+TGG - chr5_4:16855884-16855903 Msa0840960:intron 35.0%
TGTTTCCACTCTCATATTTG+TGG + chr5_4:16855921-16855940 None:intergenic 35.0%
AGAGTGGAAACATACTATGT+TGG - chr5_4:16855929-16855948 Msa0840960:intron 35.0%
! GAAACATACTATGTTGGTCT+TGG - chr5_4:16855935-16855954 Msa0840960:intron 35.0%
TATATATATATGACGGCGGA+AGG + chr5_4:16855969-16855988 None:intergenic 35.0%
TAACTTCCAGCTGATACATA+AGG + chr5_4:16856232-16856251 None:intergenic 35.0%
!! GTGTTTGTTATAAGCCAATG+GGG - chr5_4:16856414-16856433 Msa0840960:intron 35.0%
!! CAAATTGGATTTGCTGAAGT+CGG + chr5_4:16856642-16856661 None:intergenic 35.0%
TCATCATAGAATTGGAGAGA+CGG + chr5_4:16856816-16856835 None:intergenic 35.0%
TTGAGTTCATAGATGCAATG+AGG - chr5_4:16856993-16857012 Msa0840960:intron 35.0%
! GTTGGAAGACTTCTTTTCTA+CGG + chr5_4:16857090-16857109 None:intergenic 35.0%
TAAAACTGTAAATGGACGGA+AGG - chr5_4:16857120-16857139 Msa0840960:intron 35.0%
!!! TTTTTGGCTTCCTTACACTT+GGG + chr5_4:16857454-16857473 None:intergenic 35.0%
!!! ATTTTTGGCTTCCTTACACT+TGG + chr5_4:16857455-16857474 None:intergenic 35.0%
TAGTGAAAGTAGGGGAAAAA+TGG - chr5_4:16857524-16857543 Msa0840960:intron 35.0%
AGTGAAAGTAGGGGAAAAAT+GGG - chr5_4:16857525-16857544 Msa0840960:intron 35.0%
! TGTTTTGTCCTTCAAGAAGA+GGG + chr5_4:16857659-16857678 None:intergenic 35.0%
! ATGTTTTGTCCTTCAAGAAG+AGG + chr5_4:16857660-16857679 None:intergenic 35.0%
AGGGCAAAAAGTAACTTAAG+CGG + chr5_4:16857799-16857818 None:intergenic 35.0%
! CAGAGAAGAAAAGCATAATC+AGG + chr5_4:16857819-16857838 None:intergenic 35.0%
! GATTATGCTTTTCTTCTCTG+TGG - chr5_4:16857819-16857838 Msa0840960:CDS 35.0%
!! TTCACTTGCTATGCTCTTAA+AGG - chr5_4:16857867-16857886 Msa0840960:CDS 35.0%
!! TCACTTGCTATGCTCTTAAA+GGG - chr5_4:16857868-16857887 Msa0840960:CDS 35.0%
! TATGTCATTTGCCAGTATTC+CGG - chr5_4:16857915-16857934 Msa0840960:CDS 35.0%
TATATGATAGCATGCAACTG+AGG - chr5_4:16858056-16858075 Msa0840960:exon 35.0%
!! ATTCTCTAGAGCATTGTTCT+TGG - chr5_4:16858088-16858107 Msa0840960:five_prime_UTR 35.0%
! TTTTGGTCCCTTTCAATTGG+TGG + chr5_4:16848122-16848141 None:intergenic 40.0%
TGGTTAGAAACTATCTTGCG+GGG - chr5_4:16848273-16848292 Msa0840960:CDS 40.0%
!! TTCTGTTTCTAGAATGGGTG+TGG - chr5_4:16848319-16848338 Msa0840960:CDS 40.0%
!! TCTGTTTCTAGAATGGGTGT+GGG - chr5_4:16848320-16848339 Msa0840960:CDS 40.0%
CTAAAGAAGAGGTTGAAGCA+TGG - chr5_4:16848345-16848364 Msa0840960:CDS 40.0%
TGATGTTCGATTTCCACCTA+CGG - chr5_4:16848845-16848864 Msa0840960:intron 40.0%
! TCAGAGACCTTATTTACCGT+AGG + chr5_4:16848864-16848883 None:intergenic 40.0%
!!! ACGGAGGGAGTAGTTTTTTT+TGG + chr5_4:16849179-16849198 None:intergenic 40.0%
GACACTTAAAAAGGAACGGA+GGG + chr5_4:16849438-16849457 None:intergenic 40.0%
TGACACTTAAAAAGGAACGG+AGG + chr5_4:16849437-16849456 None:intergenic 40.0%
TGACACTTAAAAAGGAACGG+AGG - chr5_4:16849437-16849456 Msa0840960:intron 40.0%
TCACTAAGCAGTATGCTTCA+AGG - chr5_4:16849476-16849495 Msa0840960:intron 40.0%
AAGCAGTATGCTTCAAGGAA+AGG - chr5_4:16849481-16849500 Msa0840960:intron 40.0%
!! CAGCAACTCTGGTTTCTTTT+AGG - chr5_4:16849622-16849641 Msa0840960:intron 40.0%
!!! CTCTGGTTTCTTTTAGGGTT+TGG - chr5_4:16849628-16849647 Msa0840960:intron 40.0%
!!! GACTGTTACTTTTTCCACCA+TGG - chr5_4:16849679-16849698 Msa0840960:intron 40.0%
!!! CTGTTACTTTTTCCACCATG+GGG - chr5_4:16849681-16849700 Msa0840960:intron 40.0%
AGTGGTGAAGTGAAGAATGA+AGG + chr5_4:16849915-16849934 None:intergenic 40.0%
AACCGGATCTATCCTAAGAA+AGG - chr5_4:16850605-16850624 Msa0840960:intron 40.0%
GAGAAAGAAGAAGAAGAAGC+AGG + chr5_4:16850830-16850849 None:intergenic 40.0%
TTAGTGCTCTCAGATAGACT+TGG - chr5_4:16850856-16850875 Msa0840960:intron 40.0%
TTAAGGTTGCAACAGAATGG+GGG - chr5_4:16850986-16851005 Msa0840960:intron 40.0%
!! GAACCAAGGTTTGACTTGAA+GGG - chr5_4:16851025-16851044 Msa0840960:intron 40.0%
TAGCTGGTAGTTATAGGTTG+CGG - chr5_4:16851072-16851091 Msa0840960:intron 40.0%
! TCTAGACAGGTTAAAGGCAT+GGG + chr5_4:16851124-16851143 None:intergenic 40.0%
ATCTAGACAGGTTAAAGGCA+TGG + chr5_4:16851125-16851144 None:intergenic 40.0%
TGTGGATCTAGACAGGTTAA+AGG + chr5_4:16851130-16851149 None:intergenic 40.0%
TTAGAGTTGTGGATCTAGAC+AGG + chr5_4:16851137-16851156 None:intergenic 40.0%
! TTTAGGGGTTGTCCATTTTG+GGG + chr5_4:16851412-16851431 None:intergenic 40.0%
!! CTTTAGGGGTTGTCCATTTT+GGG + chr5_4:16851413-16851432 None:intergenic 40.0%
!! TCTTTAGGGGTTGTCCATTT+TGG + chr5_4:16851414-16851433 None:intergenic 40.0%
!!! CTTTTTTGTCACATGCTTGG+AGG - chr5_4:16851635-16851654 Msa0840960:CDS 40.0%
CACCACAAAGTTACATTTGC+TGG + chr5_4:16851666-16851685 None:intergenic 40.0%
GTGTTGTGAAGATTGATGTG+TGG - chr5_4:16851683-16851702 Msa0840960:CDS 40.0%
AGATTGATGTGTGGGATTCT+TGG - chr5_4:16851692-16851711 Msa0840960:CDS 40.0%
TCTATGATCGTGGAAAGGAA+GGG + chr5_4:16851852-16851871 None:intergenic 40.0%
TTGAGTCTATGATCGTGGAA+AGG + chr5_4:16851857-16851876 None:intergenic 40.0%
CAACCAAAATGTGAGCATAG+TGG - chr5_4:16851902-16851921 Msa0840960:intron 40.0%
TGTAGCCCTATCAATAGAGA+GGG - chr5_4:16851942-16851961 Msa0840960:intron 40.0%
! GTTTTCCTCCAATATTCCTG+CGG - chr5_4:16852000-16852019 Msa0840960:intron 40.0%
CTTAGACGCATGCTCAATTA+TGG + chr5_4:16852044-16852063 None:intergenic 40.0%
ATTGAGCATGCGTCTAAGTT+TGG - chr5_4:16852046-16852065 Msa0840960:intron 40.0%
! CCCTTTACATAACGGAGTTA+TGG - chr5_4:16852189-16852208 Msa0840960:intron 40.0%
GTAAAACAACACGTCTATGG+AGG - chr5_4:16852290-16852309 Msa0840960:intron 40.0%
AAAGGCAAGGGATAAATCGA+TGG - chr5_4:16852430-16852449 Msa0840960:intron 40.0%
!! GTTTTTCGGTGAAGGTTGAT+GGG + chr5_4:16852508-16852527 None:intergenic 40.0%
!!! ATCGGAGACTGTTGGTTTTT+CGG + chr5_4:16852522-16852541 None:intergenic 40.0%
GCGTGTTTGCTTTGGTTATT+TGG + chr5_4:16852549-16852568 None:intergenic 40.0%
! TGATTTTCATGCTCCTCTTC+TGG + chr5_4:16852587-16852606 None:intergenic 40.0%
!! ATCTGTTCTGGTTACGGTTT+TGG + chr5_4:16852633-16852652 None:intergenic 40.0%
! ACTGAGATCTGTTCTGGTTA+CGG + chr5_4:16852639-16852658 None:intergenic 40.0%
!! GTTTTCTAGTGACTGAGTTC+TGG + chr5_4:16852791-16852810 None:intergenic 40.0%
CACTAGAAAACTTCAATCGC+TGG - chr5_4:16852800-16852819 Msa0840960:intron 40.0%
!! GGCGTTATTTCTAACACTTC+TGG + chr5_4:16852847-16852866 None:intergenic 40.0%
CAAGAAGATCACTTGAATCG+AGG - chr5_4:16852893-16852912 Msa0840960:intron 40.0%
TCGCCGAAAATATGTGTTTG+AGG - chr5_4:16852956-16852975 Msa0840960:intron 40.0%
GTAGAGGAGAAGTTTCTGTA+GGG + chr5_4:16853018-16853037 None:intergenic 40.0%
!!! ACTTGGTGTAGTTTTTCCTC+GGG + chr5_4:16853100-16853119 None:intergenic 40.0%
!!! GACTTGGTGTAGTTTTTCCT+CGG + chr5_4:16853101-16853120 None:intergenic 40.0%
AGTGAGATGCACATCCTATT+GGG + chr5_4:16853133-16853152 None:intergenic 40.0%
AAGTGAGATGCACATCCTAT+TGG + chr5_4:16853134-16853153 None:intergenic 40.0%
TCTCACTTATAGATGGAGCA+AGG - chr5_4:16853146-16853165 Msa0840960:intron 40.0%
CTCACTTATAGATGGAGCAA+GGG - chr5_4:16853147-16853166 Msa0840960:intron 40.0%
! CCTCGTGAAAGTAGCTTTTA+GGG + chr5_4:16853187-16853206 None:intergenic 40.0%
!! TATCATTTTTGTGGGGCAAC+AGG + chr5_4:16853246-16853265 None:intergenic 40.0%
ATACTATTGTGTGGACCATC+TGG + chr5_4:16853283-16853302 None:intergenic 40.0%
TTCGTCTTACGTTAGGTCTA+GGG + chr5_4:16853346-16853365 None:intergenic 40.0%
TTTCGTCTTACGTTAGGTCT+AGG + chr5_4:16853347-16853366 None:intergenic 40.0%
GCGAGATAATATGCCAGAAA+AGG - chr5_4:16853487-16853506 Msa0840960:intron 40.0%
GCCAGAAAAGGAGATTATGA+CGG - chr5_4:16853499-16853518 Msa0840960:intron 40.0%
CCAGAAAAGGAGATTATGAC+GGG - chr5_4:16853500-16853519 Msa0840960:intron 40.0%
!! AAAAGGAGATTATGACGGGT+AGG - chr5_4:16853504-16853523 Msa0840960:intron 40.0%
GTAGGCATCCTATCTTTGAA+AGG - chr5_4:16853522-16853541 Msa0840960:intron 40.0%
! AGGCATCCTATCTTTGAAAG+GGG - chr5_4:16853524-16853543 Msa0840960:intron 40.0%
GTGTGGGACTATGATTCTTT+CGG + chr5_4:16853657-16853676 None:intergenic 40.0%
!! TCTGGTTTGGTCTTCTTGTA+GGG + chr5_4:16853692-16853711 None:intergenic 40.0%
! AAAGGAGTGTATCTCTGGTT+TGG + chr5_4:16853705-16853724 None:intergenic 40.0%
! TAGCTAAAGGAGTGTATCTC+TGG + chr5_4:16853710-16853729 None:intergenic 40.0%
AAGAGGCAAAGTTGTTAAGG+TGG + chr5_4:16853804-16853823 None:intergenic 40.0%
ACAACTTTGCCTCTTTAGCT+AGG - chr5_4:16853809-16853828 Msa0840960:intron 40.0%
TGTTTGTAAGACTCGGAAGA+TGG + chr5_4:16853937-16853956 None:intergenic 40.0%
TTGAACCCAAGTGATCTTCT+AGG - chr5_4:16853965-16853984 Msa0840960:intron 40.0%
ATGTGCCTAGAAGATCACTT+GGG + chr5_4:16853973-16853992 None:intergenic 40.0%
AATGTGCCTAGAAGATCACT+TGG + chr5_4:16853974-16853993 None:intergenic 40.0%
AGTGATCTTCTAGGCACATT+TGG - chr5_4:16853974-16853993 Msa0840960:intron 40.0%
! AAGCATTTTTCCATGGGTGA+GGG + chr5_4:16854001-16854020 None:intergenic 40.0%
! TAAGCATTTTTCCATGGGTG+AGG + chr5_4:16854002-16854021 None:intergenic 40.0%
TATAAAAGATGGGTACGGAG+TGG + chr5_4:16854182-16854201 None:intergenic 40.0%
CTCCATAGGTTTATTGAGAG+CGG - chr5_4:16854411-16854430 Msa0840960:intron 40.0%
TACCGCTCTCAATAAACCTA+TGG + chr5_4:16854416-16854435 None:intergenic 40.0%
GGTTTATTGAGAGCGGTAAT+TGG - chr5_4:16854418-16854437 Msa0840960:intron 40.0%
GTGAAGAAATTGGTGAAGGA+AGG - chr5_4:16854549-16854568 Msa0840960:intron 40.0%
CATTTCTTTGTGTCCCTTAG+CGG + chr5_4:16854757-16854776 None:intergenic 40.0%
! TCTTTTTCCTAGAACTCGGT+TGG - chr5_4:16854785-16854804 Msa0840960:intron 40.0%
ATTTCTTCCAACCGAGTTCT+AGG + chr5_4:16854795-16854814 None:intergenic 40.0%
CAGTTTCAGATTCGGATTTG+TGG + chr5_4:16855017-16855036 None:intergenic 40.0%
ATGCGTGCCAATGCATATAA+GGG + chr5_4:16855057-16855076 None:intergenic 40.0%
TTCCCAAGTGGCAATAGATA+TGG - chr5_4:16855087-16855106 Msa0840960:intron 40.0%
AGTGTTTCCTATGGACAGAT+TGG - chr5_4:16855206-16855225 Msa0840960:intron 40.0%
GTGTTTCCTATGGACAGATT+GGG - chr5_4:16855207-16855226 Msa0840960:intron 40.0%
! CTTTAGGAAGGATCTTTGGA+TGG - chr5_4:16855820-16855839 Msa0840960:intron 40.0%
CACTCTCATATTTGTGGATG+TGG + chr5_4:16855915-16855934 None:intergenic 40.0%
CACATCCACAAATATGAGAG+TGG - chr5_4:16855913-16855932 Msa0840960:intron 40.0%
GTAAAGACGCGTGATATGAT+AGG + chr5_4:16856343-16856362 None:intergenic 40.0%
AGTGGCCATCTAATCATGAT+CGG - chr5_4:16856493-16856512 Msa0840960:intron 40.0%
AGTGTCCAATCAAGATCAGA+TGG - chr5_4:16856578-16856597 Msa0840960:intron 40.0%
GGTAACCATCTGATCTTGAT+TGG + chr5_4:16856586-16856605 None:intergenic 40.0%
CGACTTCAGCAAATCCAATT+TGG - chr5_4:16856640-16856659 Msa0840960:intron 40.0%
GGTAATGACAAGCACCAAAT+TGG + chr5_4:16856657-16856676 None:intergenic 40.0%
GACTCATAAGTTGCACTAAC+CGG - chr5_4:16856719-16856738 Msa0840960:intron 40.0%
TAAGGAATCTGAACTGAGAG+AGG - chr5_4:16856925-16856944 Msa0840960:intron 40.0%
AAGCTAACCCTGACCTATTA+TGG - chr5_4:16857017-16857036 Msa0840960:intron 40.0%
AGCTAACCCTGACCTATTAT+GGG - chr5_4:16857018-16857037 Msa0840960:intron 40.0%
CAATAGCCCATAATAGGTCA+GGG + chr5_4:16857027-16857046 None:intergenic 40.0%
TCAATAGCCCATAATAGGTC+AGG + chr5_4:16857028-16857047 None:intergenic 40.0%
TGATAATACCCTCTTGCATC+TGG - chr5_4:16857171-16857190 Msa0840960:intron 40.0%
TTGCATCTGGCTGGAAATTT+AGG - chr5_4:16857184-16857203 Msa0840960:intron 40.0%
TGCATCTGGCTGGAAATTTA+GGG - chr5_4:16857185-16857204 Msa0840960:intron 40.0%
! TAGCATAATGGGATGAATGC+AGG - chr5_4:16857408-16857427 Msa0840960:intron 40.0%
AATTGTTCACCCCAAGTGTA+AGG - chr5_4:16857441-16857460 Msa0840960:intron 40.0%
!!! TTTTGGCTTCCTTACACTTG+GGG + chr5_4:16857453-16857472 None:intergenic 40.0%
CTTTCGGTAAATATCTCACG+AGG + chr5_4:16857493-16857512 None:intergenic 40.0%
GATATTTACCGAAAGCCACA+AGG - chr5_4:16857498-16857517 Msa0840960:intron 40.0%
ACAAGGAGCTAGTGAAAGTA+GGG - chr5_4:16857515-16857534 Msa0840960:intron 40.0%
AAATGGGCAAAAGATACAGC+TGG - chr5_4:16857541-16857560 Msa0840960:intron 40.0%
TGTCTTGATTGTTTCCACCA+GGG + chr5_4:16857627-16857646 None:intergenic 40.0%
! GTTTTGTCCTTCAAGAAGAG+GGG + chr5_4:16857658-16857677 None:intergenic 40.0%
ACTTCAGTCCTGCTATTCAT+TGG - chr5_4:16857727-16857746 Msa0840960:intron 40.0%
ATGCTCTTAAAGGGACATCA+AGG - chr5_4:16857877-16857896 Msa0840960:CDS 40.0%
AAGAACAATCACCGGAATAC+TGG + chr5_4:16857929-16857948 None:intergenic 40.0%
! GAAGGTACAAGAACAATCAC+CGG + chr5_4:16857937-16857956 None:intergenic 40.0%
!! CAATTGGTGGACTCAATTGG+TGG + chr5_4:16848109-16848128 None:intergenic 45.0%
CTACGATAACTGGAGCTGTT+TGG - chr5_4:16848253-16848272 Msa0840960:exon 45.0%
AGAGGTTGAAGCATGGAACA+AGG - chr5_4:16848352-16848371 Msa0840960:CDS 45.0%
GCCGAATCAGACATTGAACA+AGG - chr5_4:16848503-16848522 Msa0840960:CDS 45.0%
! GAGACCTTATTTACCGTAGG+TGG + chr5_4:16848861-16848880 None:intergenic 45.0%
AAGCTAAACCAGTGGTGCAA+TGG - chr5_4:16849705-16849724 Msa0840960:intron 45.0%
TGGTGCAATGGAGAGGAAAT+GGG - chr5_4:16849717-16849736 Msa0840960:intron 45.0%
GGAAGGGGAAAATAGATGGA+CGG - chr5_4:16849743-16849762 Msa0840960:intron 45.0%
GAAGGGGAAAATAGATGGAC+GGG - chr5_4:16849744-16849763 Msa0840960:intron 45.0%
!! TAGGGGTGTTTATGGTGTCA+TGG - chr5_4:16849969-16849988 Msa0840960:intron 45.0%
GATTGCAGGGATTCTATGCA+CGG + chr5_4:16850005-16850024 None:intergenic 45.0%
TAAGCTGCAAAGCGATTGCA+GGG + chr5_4:16850018-16850037 None:intergenic 45.0%
ATAAGCTGCAAAGCGATTGC+AGG + chr5_4:16850019-16850038 None:intergenic 45.0%
GTGTGGGAACAGTAAAAGGT+GGG - chr5_4:16850197-16850216 Msa0840960:intron 45.0%
AGAACCCACCACAATTTGAC+AGG - chr5_4:16850223-16850242 Msa0840960:intron 45.0%
TATATCTACCAAGGCGGCTT+TGG - chr5_4:16850738-16850757 Msa0840960:intron 45.0%
GCTTTAACTCAGCCAGAATG+AGG + chr5_4:16850786-16850805 None:intergenic 45.0%
CTGGCTGAGTTAAAGCTAGA+AGG - chr5_4:16850790-16850809 Msa0840960:intron 45.0%
TGAAGTAGAAGCAGTGGTAG+AGG + chr5_4:16850923-16850942 None:intergenic 45.0%
GGTAGATGAAGTAGAAGCAG+TGG + chr5_4:16850929-16850948 None:intergenic 45.0%
!! TTCGAAATTTTGGGGGGATG+AGG + chr5_4:16850950-16850969 None:intergenic 45.0%
TAAGGTTGCAACAGAATGGG+GGG - chr5_4:16850987-16851006 Msa0840960:intron 45.0%
!! GGAACCAAGGTTTGACTTGA+AGG - chr5_4:16851024-16851043 Msa0840960:intron 45.0%
GTAGTTATAGGTTGCGGCAT+AGG - chr5_4:16851078-16851097 Msa0840960:intron 45.0%
TGCGGCATAGGATTAAACAC+TGG - chr5_4:16851090-16851109 Msa0840960:intron 45.0%
TGCTACCCTGCTCAATAGAA+AGG - chr5_4:16851163-16851182 Msa0840960:CDS 45.0%
GCTACCCTGCTCAATAGAAA+GGG - chr5_4:16851164-16851183 Msa0840960:CDS 45.0%
TCGTCCCTTTCTATTGAGCA+GGG + chr5_4:16851171-16851190 None:intergenic 45.0%
TTCGTCCCTTTCTATTGAGC+AGG + chr5_4:16851172-16851191 None:intergenic 45.0%
TGCTCAATAGAAAGGGACGA+AGG - chr5_4:16851171-16851190 Msa0840960:CDS 45.0%
GCTCAATAGAAAGGGACGAA+GGG - chr5_4:16851172-16851191 Msa0840960:CDS 45.0%
AATAGAAAGGGACGAAGGGT+TGG - chr5_4:16851176-16851195 Msa0840960:CDS 45.0%
ATAGAAAGGGACGAAGGGTT+GGG - chr5_4:16851177-16851196 Msa0840960:CDS 45.0%
!! TCAGAAGCACCTCTTCCTAA+GGG + chr5_4:16851273-16851292 None:intergenic 45.0%
TGATTCCAATGCAGGGTAGT+TGG + chr5_4:16851361-16851380 None:intergenic 45.0%
GTAAAAGGACCTCCCCAAAA+TGG - chr5_4:16851397-16851416 Msa0840960:CDS 45.0%
AAACTCCTTGCATGCTGAAC+TGG + chr5_4:16851490-16851509 None:intergenic 45.0%
AGTTCAGCATGCAAGGAGTT+TGG - chr5_4:16851489-16851508 Msa0840960:CDS 45.0%
TAAGACAACCTTGTTGCACC+AGG + chr5_4:16851538-16851557 None:intergenic 45.0%
GTGCAACAAGGTTGTCTTAG+AGG - chr5_4:16851539-16851558 Msa0840960:CDS 45.0%
GTTGTCTTAGAGGTCCTAAC+TGG - chr5_4:16851549-16851568 Msa0840960:CDS 45.0%
GTCCTAACTGGTACCTTTGA+TGG - chr5_4:16851561-16851580 Msa0840960:CDS 45.0%
!! CACCATCAAAGGTACCAGTT+AGG + chr5_4:16851566-16851585 None:intergenic 45.0%
!! ACCTTTGATGGTGTGCCTAA+AGG - chr5_4:16851573-16851592 Msa0840960:CDS 45.0%
TCCTTTAGGCACACCATCAA+AGG + chr5_4:16851577-16851596 None:intergenic 45.0%
!! TTTGATGGTGTGCCTAAAGG+AGG - chr5_4:16851576-16851595 Msa0840960:CDS 45.0%
GATTCTTGGTCTGGTTACCA+AGG - chr5_4:16851706-16851725 Msa0840960:CDS 45.0%
TGCTCCCATTGCAAGATGAT+AGG + chr5_4:16851783-16851802 None:intergenic 45.0%
CTTGCAATGGGAGCAAAAGT+CGG - chr5_4:16851788-16851807 Msa0840960:CDS 45.0%
TTGCAATGGGAGCAAAAGTC+GGG - chr5_4:16851789-16851808 Msa0840960:CDS 45.0%
AAGGAAGGGATATGTGTTCC+CGG + chr5_4:16851838-16851857 None:intergenic 45.0%
GTCTATGATCGTGGAAAGGA+AGG + chr5_4:16851853-16851872 None:intergenic 45.0%
! TGGCCACTATGCTCACATTT+TGG + chr5_4:16851908-16851927 None:intergenic 45.0%
GTGTAGCCCTATCAATAGAG+AGG - chr5_4:16851941-16851960 Msa0840960:intron 45.0%
GTAGCCCTATCAATAGAGAG+GGG - chr5_4:16851943-16851962 Msa0840960:intron 45.0%
CACTCCCCTCTCTATTGATA+GGG + chr5_4:16851950-16851969 None:intergenic 45.0%
! TGCGTCTAAGTTTGGTTCCA+AGG - chr5_4:16852054-16852073 Msa0840960:intron 45.0%
! GCGTCTAAGTTTGGTTCCAA+GGG - chr5_4:16852055-16852074 Msa0840960:intron 45.0%
GTTCCAAGGGTCGAAATCTT+TGG - chr5_4:16852068-16852087 Msa0840960:intron 45.0%
TCGCATAAGAATCACGCAGT+GGG + chr5_4:16852350-16852369 None:intergenic 45.0%
TTCGCATAAGAATCACGCAG+TGG + chr5_4:16852351-16852370 None:intergenic 45.0%
TCACCAATGCGAACTTTCAG+AGG - chr5_4:16852376-16852395 Msa0840960:intron 45.0%
CACCAATGCGAACTTTCAGA+GGG - chr5_4:16852377-16852396 Msa0840960:intron 45.0%
ACCAATGCGAACTTTCAGAG+GGG - chr5_4:16852378-16852397 Msa0840960:intron 45.0%
! ACAACAAGGTGTCAGATCAG+AGG - chr5_4:16852402-16852421 Msa0840960:intron 45.0%
GTCAGATCAGAGGAGAGAAA+AGG - chr5_4:16852412-16852431 Msa0840960:intron 45.0%
ATCAGAGGAGAGAAAAGGCA+AGG - chr5_4:16852417-16852436 Msa0840960:intron 45.0%
TCAGAGGAGAGAAAAGGCAA+GGG - chr5_4:16852418-16852437 Msa0840960:intron 45.0%
!! TTTGCTGGTTCGGTTCTGTA+TGG + chr5_4:16852458-16852477 None:intergenic 45.0%
TACAGAACCGAACCAGCAAA+AGG - chr5_4:16852458-16852477 Msa0840960:intron 45.0%
!! GGTTTTTCGGTGAAGGTTGA+TGG + chr5_4:16852509-16852528 None:intergenic 45.0%
!!! GACTGTTGGTTTTTCGGTGA+AGG + chr5_4:16852516-16852535 None:intergenic 45.0%
ATAACCAAAGCAAACACGCG+AGG - chr5_4:16852550-16852569 Msa0840960:intron 45.0%
AAGATCACTTGAATCGAGGG+AGG - chr5_4:16852897-16852916 Msa0840960:intron 45.0%
GACATAGATCATCTCCGATG+AGG + chr5_4:16852938-16852957 None:intergenic 45.0%
GGATGGAGAAGAGAGAAAAG+CGG - chr5_4:16852977-16852996 Msa0840960:intron 45.0%
AGAAAAGCGGCCACTCATTA+GGG - chr5_4:16852990-16853009 Msa0840960:intron 45.0%
GGTAGAGGAGAAGTTTCTGT+AGG + chr5_4:16853019-16853038 None:intergenic 45.0%
TATTGGGCGAGTTAGTGACT+TGG + chr5_4:16853117-16853136 None:intergenic 45.0%
AAGTCACTAACTCGCCCAAT+AGG - chr5_4:16853116-16853135 Msa0840960:intron 45.0%
! CCCTAAAAGCTACTTTCACG+AGG - chr5_4:16853184-16853203 Msa0840960:intron 45.0%
! GCCTCGTGAAAGTAGCTTTT+AGG + chr5_4:16853188-16853207 None:intergenic 45.0%
ACAGGCTTATGTGCACCATT+TGG + chr5_4:16853228-16853247 None:intergenic 45.0%
TGTCTTTAGGTGGTTAGGGT+GGG + chr5_4:16853402-16853421 None:intergenic 45.0%
ATGTCTTTAGGTGGTTAGGG+TGG + chr5_4:16853403-16853422 None:intergenic 45.0%
! CCCGTCATAATCTCCTTTTC+TGG + chr5_4:16853503-16853522 None:intergenic 45.0%
CTTCGTCCCCTTTCAAAGAT+AGG + chr5_4:16853533-16853552 None:intergenic 45.0%
TCTTGTAGGGGTGGATCATT+GGG + chr5_4:16853679-16853698 None:intergenic 45.0%
TTCTTGTAGGGGTGGATCAT+TGG + chr5_4:16853680-16853699 None:intergenic 45.0%
!! CTGGTTTGGTCTTCTTGTAG+GGG + chr5_4:16853691-16853710 None:intergenic 45.0%
!! CTCTGGTTTGGTCTTCTTGT+AGG + chr5_4:16853693-16853712 None:intergenic 45.0%
GAAGACGGGTCTCTTCATTT+AGG + chr5_4:16853750-16853769 None:intergenic 45.0%
TAGGATCTTGGTTGGAAGAC+GGG + chr5_4:16853764-16853783 None:intergenic 45.0%
GTAGGATCTTGGTTGGAAGA+CGG + chr5_4:16853765-16853784 None:intergenic 45.0%
GGTGGGATCAGTTATGATGT+AGG + chr5_4:16853783-16853802 None:intergenic 45.0%
GGCAAAGTTGTTAAGGTGGT+GGG + chr5_4:16853800-16853819 None:intergenic 45.0%
AGGCAAAGTTGTTAAGGTGG+TGG + chr5_4:16853801-16853820 None:intergenic 45.0%
ACTTAGAGGTCTTGGGTAAG+TGG + chr5_4:16853882-16853901 None:intergenic 45.0%
TTGTAAGACTCGGAAGATGG+AGG + chr5_4:16853934-16853953 None:intergenic 45.0%
TTTCCACATCTTCTTCGGGA+AGG - chr5_4:16854484-16854503 Msa0840960:intron 45.0%
CTTCATGTTGCAGTGATTGC+TGG - chr5_4:16854513-16854532 Msa0840960:intron 45.0%
TGGTGAAGGAAGGGAAAGAT+AGG - chr5_4:16854559-16854578 Msa0840960:intron 45.0%
CAACTCAGCAACAAGAGCTA+GGG + chr5_4:16854619-16854638 None:intergenic 45.0%
TCAACTCAGCAACAAGAGCT+AGG + chr5_4:16854620-16854639 None:intergenic 45.0%
! AGCTCTTGTTGCTGAGTTGA+CGG - chr5_4:16854620-16854639 Msa0840960:intron 45.0%
TGTTTGGTAGAGAAGAAGGG+AGG - chr5_4:16854663-16854682 Msa0840960:intron 45.0%
GTTTGGTAGAGAAGAAGGGA+GGG - chr5_4:16854664-16854683 Msa0840960:intron 45.0%
CGTGCAACCCTTATATGCAT+TGG - chr5_4:16855047-16855066 Msa0840960:intron 45.0%
CATGCGTGCCAATGCATATA+AGG + chr5_4:16855058-16855077 None:intergenic 45.0%
AAACCTTCTCATGCACAGTG+CGG - chr5_4:16856364-16856383 Msa0840960:intron 45.0%
TGTTATAAGCCAATGGGGTG+TGG - chr5_4:16856419-16856438 Msa0840960:intron 45.0%
TCTCTACTGTCACACGTTAG+TGG - chr5_4:16856475-16856494 Msa0840960:intron 45.0%
GCCATCTAATCATGATCGGA+CGG - chr5_4:16856497-16856516 Msa0840960:intron 45.0%
ACCGTCCGATCATGATTAGA+TGG + chr5_4:16856501-16856520 None:intergenic 45.0%
! GGACGGTCCAAATTCAAGTT+TGG - chr5_4:16856514-16856533 Msa0840960:intron 45.0%
ACAATCACTCAGTCTGACGA+AGG + chr5_4:16856607-16856626 None:intergenic 45.0%
ATGTTGCAAGCAGCTAAGCA+TGG - chr5_4:16856965-16856984 Msa0840960:intron 45.0%
ATTTCCAGCCAGATGCAAGA+GGG + chr5_4:16857182-16857201 None:intergenic 45.0%
AATTTCCAGCCAGATGCAAG+AGG + chr5_4:16857183-16857202 None:intergenic 45.0%
AGATCTTCGGTGAAGATCAG+AGG + chr5_4:16857215-16857234 None:intergenic 45.0%
TCTGATCTTCACCGAAGATC+TGG - chr5_4:16857214-16857233 Msa0840960:intron 45.0%
TCTCTTTGCATTTGGAGAGC+AGG + chr5_4:16857241-16857260 None:intergenic 45.0%
CTACTTTCACTAGCTCCTTG+TGG + chr5_4:16857516-16857535 None:intergenic 45.0%
CACAAGGAGCTAGTGAAAGT+AGG - chr5_4:16857514-16857533 Msa0840960:intron 45.0%
CAAGGAGCTAGTGAAAGTAG+GGG - chr5_4:16857516-16857535 Msa0840960:intron 45.0%
CTGTCTTGATTGTTTCCACC+AGG + chr5_4:16857628-16857647 None:intergenic 45.0%
GGTGGAAACAATCAAGACAG+TGG - chr5_4:16857628-16857647 Msa0840960:intron 45.0%
TGGAATTCCCCTCTTCTTGA+AGG - chr5_4:16857648-16857667 Msa0840960:intron 45.0%
ACTTAAGCGGCAGAGACTTT+AGG + chr5_4:16857786-16857805 None:intergenic 45.0%
AGCACAGAAAGCAACCATCA+TGG + chr5_4:16857848-16857867 None:intergenic 45.0%
ATGAAGAGTCGCAACTGTGA+AGG + chr5_4:16857955-16857974 None:intergenic 45.0%
!!! ATTAAATGAAAAATATATTT+TGG + chr5_4:16854304-16854323 None:intergenic 5.0%
!! TCAATTATATAAATTTAATA+AGG + chr5_4:16855406-16855425 None:intergenic 5.0%
!! ATATATATATATATATATGA+CGG + chr5_4:16855976-16855995 None:intergenic 5.0%
! ATGGCAAGCATTGCAGCAAG+TGG - chr5_4:16848200-16848219 Msa0840960:three_prime_UTR 50.0%
GGGTGTGGGATCTAAAGAAG+AGG - chr5_4:16848334-16848353 Msa0840960:CDS 50.0%
AGAAACCAGAGTTGCTGCGA+CGG + chr5_4:16849619-16849638 None:intergenic 50.0%
! TGGTTTAGCTTACCCCATGG+TGG + chr5_4:16849696-16849715 None:intergenic 50.0%
!! CACTGGTTTAGCTTACCCCA+TGG + chr5_4:16849699-16849718 None:intergenic 50.0%
CATGGGGTAAGCTAAACCAG+TGG - chr5_4:16849697-16849716 Msa0840960:intron 50.0%
AAACCAGTGGTGCAATGGAG+AGG - chr5_4:16849710-16849729 Msa0840960:intron 50.0%
TTTCCTCTCCATTGCACCAC+TGG + chr5_4:16849716-16849735 None:intergenic 50.0%
GTGGTGCAATGGAGAGGAAA+TGG - chr5_4:16849716-16849735 Msa0840960:intron 50.0%
GGTGCAATGGAGAGGAAATG+GGG - chr5_4:16849718-16849737 Msa0840960:intron 50.0%
CAATGGAGAGGAAATGGGGA+GGG - chr5_4:16849722-16849741 Msa0840960:intron 50.0%
GGAGGGAAGGGGAAAATAGA+TGG - chr5_4:16849739-16849758 Msa0840960:intron 50.0%
GGGAAAATAGATGGACGGGT+GGG - chr5_4:16849748-16849767 Msa0840960:intron 50.0%
GGAAAATAGATGGACGGGTG+GGG - chr5_4:16849749-16849768 Msa0840960:intron 50.0%
GAAAATAGATGGACGGGTGG+GGG - chr5_4:16849750-16849769 Msa0840960:intron 50.0%
GAGCGTGTGGGAACAGTAAA+AGG - chr5_4:16850193-16850212 Msa0840960:intron 50.0%
CGTGTGGGAACAGTAAAAGG+TGG - chr5_4:16850196-16850215 Msa0840960:intron 50.0%
!!! GGCTTTGGAGGTACCCTTTT+GGG - chr5_4:16850753-16850772 Msa0840960:intron 50.0%
CCTTGACAAGAGGCTTGAGA+TGG + chr5_4:16850890-16850909 None:intergenic 50.0%
CCATCTCAAGCCTCTTGTCA+AGG - chr5_4:16850887-16850906 Msa0840960:CDS 50.0%
AACAGAATGGGGGGAGGATT+TGG - chr5_4:16850996-16851015 Msa0840960:intron 50.0%
GGATTTGGAAGCAGGAACCA+AGG - chr5_4:16851011-16851030 Msa0840960:intron 50.0%
GCTCCCTTCAAGTCAAACCT+TGG + chr5_4:16851031-16851050 None:intergenic 50.0%
! AGACAGGTTAAAGGCATGGG+TGG + chr5_4:16851121-16851140 None:intergenic 50.0%
TAGAAAGGGACGAAGGGTTG+GGG - chr5_4:16851178-16851197 Msa0840960:CDS 50.0%
TGCTGACCACTGACAAGTAG+GGG + chr5_4:16851230-16851249 None:intergenic 50.0%
! GTGCTGACCACTGACAAGTA+GGG + chr5_4:16851231-16851250 None:intergenic 50.0%
!! AGTGCTGACCACTGACAAGT+AGG + chr5_4:16851232-16851251 None:intergenic 50.0%
CACCTCTTCCTAAGGGAACA+AGG + chr5_4:16851266-16851285 None:intergenic 50.0%
!! CTCAGAAGCACCTCTTCCTA+AGG + chr5_4:16851274-16851293 None:intergenic 50.0%
!! AAGAGGTGCTTCTGAGCTAG+TGG - chr5_4:16851278-16851297 Msa0840960:CDS 50.0%
TTCCAATGCAGGGTAGTTGG+CGG + chr5_4:16851358-16851377 None:intergenic 50.0%
TTGCAGTATCGCCTTGATCC+TGG - chr5_4:16851517-16851536 Msa0840960:CDS 50.0%
ACCTTGTTGCACCAGGATCA+AGG + chr5_4:16851531-16851550 None:intergenic 50.0%
AAGGCTGTTGCTCCTCCTTT+AGG + chr5_4:16851591-16851610 None:intergenic 50.0%
GATGTGTGGGATTCTTGGTC+TGG - chr5_4:16851697-16851716 Msa0840960:CDS 50.0%
GCACTCCCCTCTCTATTGAT+AGG + chr5_4:16851951-16851970 None:intergenic 50.0%
GTCTTCCGCAGGAATATTGG+AGG + chr5_4:16852008-16852027 None:intergenic 50.0%
TGCGTCTTCCGCAGGAATAT+TGG + chr5_4:16852011-16852030 None:intergenic 50.0%
GGTCCAAAGATTTCGACCCT+TGG + chr5_4:16852074-16852093 None:intergenic 50.0%
TTCAGAGTCTTCGCAGTGAG+AGG - chr5_4:16852253-16852272 Msa0840960:intron 50.0%
TCAGAGTCTTCGCAGTGAGA+GGG - chr5_4:16852254-16852273 Msa0840960:intron 50.0%
CCAATGCGAACTTTCAGAGG+GGG - chr5_4:16852379-16852398 Msa0840960:intron 50.0%
ACTTTCAGAGGGGGACAACA+AGG - chr5_4:16852388-16852407 Msa0840960:intron 50.0%
TTGGCTTCATCGGAGACTGT+TGG + chr5_4:16852530-16852549 None:intergenic 50.0%
GGAGAGAAGCTTACCAGAAG+AGG - chr5_4:16852571-16852590 Msa0840960:intron 50.0%
! TCGGAGACTCGTGACTTTTC+TGG + chr5_4:16852664-16852683 None:intergenic 50.0%
GAGTCTCCGATGAAGCTGAA+CGG - chr5_4:16852674-16852693 Msa0840960:intron 50.0%
TCTGGTCCGTTCAGCTTCAT+CGG + chr5_4:16852683-16852702 None:intergenic 50.0%
TACTCTACTTGCGTGGTGTC+TGG + chr5_4:16852701-16852720 None:intergenic 50.0%
ACCCGTGAAGAAACAATCGC+CGG - chr5_4:16852753-16852772 Msa0840960:intron 50.0%
! TCCCGGCGATTGTTTCTTCA+CGG + chr5_4:16852758-16852777 None:intergenic 50.0%
!! GACTGAGTTCTGGTTTGCTG+CGG + chr5_4:16852781-16852800 None:intergenic 50.0%
GATCATCTCCGATGAGGATC+CGG + chr5_4:16852932-16852951 None:intergenic 50.0%
GAGAAAAGCGGCCACTCATT+AGG - chr5_4:16852989-16853008 Msa0840960:intron 50.0%
TCCTCGGGAACTCTCTGTTT+GGG + chr5_4:16853085-16853104 None:intergenic 50.0%
TTCCTCGGGAACTCTCTGTT+TGG + chr5_4:16853086-16853105 None:intergenic 50.0%
GGCTTATGTGCACCATTTGG+TGG + chr5_4:16853225-16853244 None:intergenic 50.0%
! GTTTGGTCTTCTTGTAGGGG+TGG + chr5_4:16853688-16853707 None:intergenic 50.0%
AAGATGGAGGTCTAGGAGTG+AGG + chr5_4:16853921-16853940 None:intergenic 50.0%
AGTCCTTCCCGAAGAAGATG+TGG + chr5_4:16854490-16854509 None:intergenic 50.0%
! GCTCTTGTTGCTGAGTTGAC+GGG - chr5_4:16854621-16854640 Msa0840960:intron 50.0%
TTAGCGGCTGCAAGAAGAAC+AGG + chr5_4:16854741-16854760 None:intergenic 50.0%
TGTTCTTCTTGCAGCCGCTA+AGG - chr5_4:16854740-16854759 Msa0840960:intron 50.0%
GTTCTTCTTGCAGCCGCTAA+GGG - chr5_4:16854741-16854760 Msa0840960:intron 50.0%
TTGTGGGCAAGTGGCAATTG+CGG + chr5_4:16855000-16855019 None:intergenic 50.0%
GATTCGGATTTGTGGGCAAG+TGG + chr5_4:16855009-16855028 None:intergenic 50.0%
ATGCCTTCTGTGTTCCCAAG+TGG - chr5_4:16855075-16855094 Msa0840960:intron 50.0%
! TTGCCACTTGGGAACACAGA+AGG + chr5_4:16855081-16855100 None:intergenic 50.0%
CGCAAGTACATCTCTTGGGT+AGG - chr5_4:16855865-16855884 Msa0840960:intron 50.0%
ATTCCGCACTGTGCATGAGA+AGG + chr5_4:16856370-16856389 None:intergenic 50.0%
AATACCCTCTTGCATCTGGC+TGG - chr5_4:16857175-16857194 Msa0840960:intron 50.0%
CTTCGGTGAAGATCAGAGGA+AGG + chr5_4:16857211-16857230 None:intergenic 50.0%
AATGGGATGAATGCAGGCTG+TGG - chr5_4:16857414-16857433 Msa0840960:intron 50.0%
CACTAGCTCCTTGTGGCTTT+CGG + chr5_4:16857509-16857528 None:intergenic 50.0%
GAAAGCTGCAGCGAACATGA+TGG + chr5_4:16857599-16857618 None:intergenic 50.0%
AACGGCGCGTTATGCAGAAA+AGG - chr5_4:16857756-16857775 Msa0840960:CDS 50.0%
CTTCTCTGTGGTGTCCATGA+TGG - chr5_4:16857831-16857850 Msa0840960:CDS 50.0%
ATCTTGCGGGGCATGATCTG+TGG - chr5_4:16848285-16848304 Msa0840960:CDS 55.0%
TCTTGCGGGGCATGATCTGT+GGG - chr5_4:16848286-16848305 Msa0840960:CDS 55.0%
!! AGTGCAAGGGCTAGTCCGTA+TGG - chr5_4:16849592-16849611 Msa0840960:intron 55.0%
!! GTGCAAGGGCTAGTCCGTAT+GGG - chr5_4:16849593-16849612 Msa0840960:intron 55.0%
GCAATGGAGAGGAAATGGGG+AGG - chr5_4:16849721-16849740 Msa0840960:intron 55.0%
GAGAGGAAATGGGGAGGGAA+GGG - chr5_4:16849727-16849746 Msa0840960:intron 55.0%
AGAGGAAATGGGGAGGGAAG+GGG - chr5_4:16849728-16849747 Msa0840960:intron 55.0%
GGGGAAAATAGATGGACGGG+TGG - chr5_4:16849747-16849766 Msa0840960:intron 55.0%
! ATCTACCAAGGCGGCTTTGG+AGG - chr5_4:16850741-16850760 Msa0840960:intron 55.0%
!!! CGGCTTTGGAGGTACCCTTT+TGG - chr5_4:16850752-16850771 Msa0840960:intron 55.0%
!!! TGGAGGTACCCTTTTGGGCA+CGG - chr5_4:16850758-16850777 Msa0840960:intron 55.0%
ATGAGGACCCGTGCCCAAAA+GGG + chr5_4:16850769-16850788 None:intergenic 55.0%
AATGAGGACCCGTGCCCAAA+AGG + chr5_4:16850770-16850789 None:intergenic 55.0%
ACCACTGACAAGTAGGGGTC+GGG + chr5_4:16851225-16851244 None:intergenic 55.0%
GACCACTGACAAGTAGGGGT+CGG + chr5_4:16851226-16851245 None:intergenic 55.0%
GTCAGTGGTCAGCACTGTGT+TGG - chr5_4:16851236-16851255 Msa0840960:CDS 55.0%
AGTGGTCAGCACTGTGTTGG+AGG - chr5_4:16851239-16851258 Msa0840960:CDS 55.0%
GTGGTCAGCACTGTGTTGGA+GGG - chr5_4:16851240-16851259 Msa0840960:CDS 55.0%
!! TTGGAGGGCCTTGTTCCCTT+AGG - chr5_4:16851255-16851274 Msa0840960:CDS 55.0%
!! GGCCTTGTTCCCTTAGGAAG+AGG - chr5_4:16851261-16851280 Msa0840960:CDS 55.0%
!! AGGGGTTGTCCATTTTGGGG+AGG + chr5_4:16851409-16851428 None:intergenic 55.0%
CTTGCATGCTGAACTGGCTG+GGG + chr5_4:16851484-16851503 None:intergenic 55.0%
CCTTGCATGCTGAACTGGCT+GGG + chr5_4:16851485-16851504 None:intergenic 55.0%
TCCTTGCATGCTGAACTGGC+TGG + chr5_4:16851486-16851505 None:intergenic 55.0%
GCCTTGATCCTGGTGCAACA+AGG - chr5_4:16851527-16851546 Msa0840960:CDS 55.0%
GCATAGTGGCCAAAGAGACG+CGG - chr5_4:16851916-16851935 Msa0840960:intron 55.0%
TCGCTTAATGCGTCTTCCGC+AGG + chr5_4:16852019-16852038 None:intergenic 55.0%
ATGGACCAGCTCTGCAGATG+CGG - chr5_4:16852208-16852227 Msa0840960:intron 55.0%
CAGAGTCTTCGCAGTGAGAG+GGG - chr5_4:16852255-16852274 Msa0840960:intron 55.0%
! CCCCCTCTGAAAGTTCGCAT+TGG + chr5_4:16852382-16852401 None:intergenic 55.0%
CTCTCCTCGCGTGTTTGCTT+TGG + chr5_4:16852557-16852576 None:intergenic 55.0%
CTGGCGACTGAGATCTGTTC+TGG + chr5_4:16852645-16852664 None:intergenic 55.0%
CGCAAGCTACTCTACTTGCG+TGG + chr5_4:16852708-16852727 None:intergenic 55.0%
! CGCAAGTAGAGTAGCTTGCG+AGG - chr5_4:16852708-16852727 Msa0840960:intron 55.0%
! CCCGGCGATTGTTTCTTCAC+GGG + chr5_4:16852757-16852776 None:intergenic 55.0%
CCCGTGAAGAAACAATCGCC+GGG - chr5_4:16852754-16852773 Msa0840960:intron 55.0%
CATCCTCACCGGATCCTCAT+CGG - chr5_4:16852921-16852940 Msa0840960:intron 55.0%
! CTGTAGGGTGCCCTAATGAG+TGG + chr5_4:16853003-16853022 None:intergenic 55.0%
ACCCAAACAGAGAGTTCCCG+AGG - chr5_4:16853081-16853100 Msa0840960:intron 55.0%
AGGGGTGGATCATTGGGTGT+GGG + chr5_4:16853673-16853692 None:intergenic 55.0%
TAGGGGTGGATCATTGGGTG+TGG + chr5_4:16853674-16853693 None:intergenic 55.0%
!!! GCGTTGGAGGCTGGTTTTAG+AGG + chr5_4:16853860-16853879 None:intergenic 55.0%
! TCTTGGGTAAGTGGCGTTGG+AGG + chr5_4:16853873-16853892 None:intergenic 55.0%
AGGTCTTGGGTAAGTGGCGT+TGG + chr5_4:16853876-16853895 None:intergenic 55.0%
GACTCGGAAGATGGAGGTCT+AGG + chr5_4:16853928-16853947 None:intergenic 55.0%
CACATTTGGACCCTCACCCA+TGG - chr5_4:16853988-16854007 Msa0840960:intron 55.0%
AAGAAGGGAGGGCAGGTAGT+TGG - chr5_4:16854675-16854694 Msa0840960:intron 55.0%
GTGGCAATTGCGGGAATCGT+TGG + chr5_4:16854990-16855009 None:intergenic 55.0%
TGTGGGCAAGTGGCAATTGC+GGG + chr5_4:16854999-16855018 None:intergenic 55.0%
TCCTGACAACCACACCCCAT+TGG + chr5_4:16856431-16856450 None:intergenic 55.0%
GGGGTGTGGTTGTCAGGAAT+CGG - chr5_4:16856433-16856452 Msa0840960:intron 55.0%
GGAGAGCAGGACCAGATCTT+CGG + chr5_4:16857228-16857247 None:intergenic 55.0%
CTTGCGGGGCATGATCTGTG+GGG - chr5_4:16848287-16848306 Msa0840960:CDS 60.0%
AGTTGCTGCGACGGCCCATA+CGG + chr5_4:16849610-16849629 None:intergenic 60.0%
GGAGAGGAAATGGGGAGGGA+AGG - chr5_4:16849726-16849745 Msa0840960:intron 60.0%
AATAGATGGACGGGTGGGGG+TGG - chr5_4:16849753-16849772 Msa0840960:intron 60.0%
ATAGATGGACGGGTGGGGGT+GGG - chr5_4:16849754-16849773 Msa0840960:intron 60.0%
!!! GGAGGTACCCTTTTGGGCAC+GGG - chr5_4:16850759-16850778 Msa0840960:intron 60.0%
TTGGGCACGGGTCCTCATTC+TGG - chr5_4:16850771-16850790 Msa0840960:intron 60.0%
GGTTGCAACAGAATGGGGGG+AGG - chr5_4:16850990-16851009 Msa0840960:intron 60.0%
TGGGGGGAGGATTTGGAAGC+AGG - chr5_4:16851003-16851022 Msa0840960:intron 60.0%
AGTAGGGGTCGGGTGGTGTT+GGG + chr5_4:16851215-16851234 None:intergenic 60.0%
AAGTAGGGGTCGGGTGGTGT+TGG + chr5_4:16851216-16851235 None:intergenic 60.0%
ACTGACAAGTAGGGGTCGGG+TGG + chr5_4:16851222-16851241 None:intergenic 60.0%
ACCCGACCCCTACTTGTCAG+TGG - chr5_4:16851221-16851240 Msa0840960:CDS 60.0%
AGCCGCCAACTACCCTGCAT+TGG - chr5_4:16851353-16851372 Msa0840960:intron 60.0%
CCCAGCCAGTTCAGCATGCA+AGG - chr5_4:16851482-16851501 Msa0840960:CDS 60.0%
GCTACACAGCCGCGTCTCTT+TGG + chr5_4:16851928-16851947 None:intergenic 60.0%
TATGGCCGCATCTGCAGAGC+TGG + chr5_4:16852216-16852235 None:intergenic 60.0%
!! GTTCTGGTTTGCTGCGGTCC+CGG + chr5_4:16852775-16852794 None:intergenic 60.0%
TCGAGGGAGGACATCCTCAC+CGG - chr5_4:16852910-16852929 Msa0840960:intron 60.0%
TCTCCGATGAGGATCCGGTG+AGG + chr5_4:16852927-16852946 None:intergenic 60.0%
GGTAGAGAAGAAGGGAGGGC+AGG - chr5_4:16854668-16854687 Msa0840960:intron 60.0%
GCCAATGGGGTGTGGTTGTC+AGG - chr5_4:16856427-16856446 Msa0840960:intron 60.0%
GCTGCAGCTTTCACAGTCCC+TGG - chr5_4:16857607-16857626 Msa0840960:intron 60.0%
GCAGCTTTCACAGTCCCTGG+TGG - chr5_4:16857610-16857629 Msa0840960:intron 60.0%
ATGGGCCGTCGCAGCAACTC+TGG - chr5_4:16849611-16849630 Msa0840960:intron 65.0%
GGGTACCTCCAAAGCCGCCT+TGG + chr5_4:16850749-16850768 None:intergenic 65.0%
GCATGCTGAACTGGCTGGGG+AGG + chr5_4:16851481-16851500 None:intergenic 65.0%
! GGGTAAGTGGCGTTGGAGGC+TGG + chr5_4:16853869-16853888 None:intergenic 65.0%
ATGGACGGGTGGGGGTGGGA+GGG - chr5_4:16849758-16849777 Msa0840960:intron 70.0%
! AGGGGTCGGGTGGTGTTGGG+AGG + chr5_4:16851212-16851231 None:intergenic 70.0%
GATGGACGGGTGGGGGTGGG+AGG - chr5_4:16849757-16849776 Msa0840960:intron 75.0%
TGGACGGGTGGGGGTGGGAG+GGG - chr5_4:16849759-16849778 Msa0840960:intron 75.0%
GGTGGGGGTGGGAGGGGGAT+GGG - chr5_4:16849765-16849784 Msa0840960:intron 75.0%
GTGGGGGTGGGAGGGGGATG+GGG - chr5_4:16849766-16849785 Msa0840960:intron 75.0%
! GGACGGGTGGGGGTGGGAGG+GGG - chr5_4:16849760-16849779 Msa0840960:intron 80.0%
! GGGTGGGGGTGGGAGGGGGA+TGG - chr5_4:16849764-16849783 Msa0840960:intron 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 16848086 16858184 16848086 ID=Msa0840960;Name=Msa0840960
chr5_4 mRNA 16848086 16858184 16848086 ID=Msa0840960-mRNA-1;Parent=Msa0840960;Name=Msa0840960-mRNA-1;_AED=0.02;_eAED=0.02;_QI=114|1|1|1|0.5|0.55|9|176|734
chr5_4 exon 16848086 16848840 16848086 ID=Msa0840960-mRNA-1:exon:7259;Parent=Msa0840960-mRNA-1
chr5_4 exon 16848994 16849430 16848994 ID=Msa0840960-mRNA-1:exon:7258;Parent=Msa0840960-mRNA-1
chr5_4 exon 16850086 16850145 16850086 ID=Msa0840960-mRNA-1:exon:7257;Parent=Msa0840960-mRNA-1
chr5_4 exon 16850388 16850444 16850388 ID=Msa0840960-mRNA-1:exon:7256;Parent=Msa0840960-mRNA-1
chr5_4 exon 16850882 16850933 16850882 ID=Msa0840960-mRNA-1:exon:7255;Parent=Msa0840960-mRNA-1
chr5_4 exon 16850961 16850983 16850961 ID=Msa0840960-mRNA-1:exon:7254;Parent=Msa0840960-mRNA-1
chr5_4 exon 16851135 16851302 16851135 ID=Msa0840960-mRNA-1:exon:7253;Parent=Msa0840960-mRNA-1
chr5_4 exon 16851391 16851894 16851391 ID=Msa0840960-mRNA-1:exon:7252;Parent=Msa0840960-mRNA-1
chr5_4 exon 16857746 16858184 16857746 ID=Msa0840960-mRNA-1:exon:7251;Parent=Msa0840960-mRNA-1
chr5_4 five_prime_UTR 16858071 16858184 16858071 ID=Msa0840960-mRNA-1:five_prime_utr;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16857746 16858070 16857746 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16851391 16851894 16851391 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16851135 16851302 16851135 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16850961 16850983 16850961 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16850882 16850933 16850882 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16850388 16850444 16850388 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16850086 16850145 16850086 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16848994 16849430 16848994 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 CDS 16848262 16848840 16848262 ID=Msa0840960-mRNA-1:cds;Parent=Msa0840960-mRNA-1
chr5_4 three_prime_UTR 16848086 16848261 16848086 ID=Msa0840960-mRNA-1:three_prime_utr;Parent=Msa0840960-mRNA-1
Gene Sequence

>Msa0840960

ATGGCAAGCATTGCAGCAAGTGGAATAGTTCTTGAACCACTAACAAAAGATAACTACGATAACTGGAGCTGTTTGGTTAGAAACTATCTTGCGGGGCATGATCTGTGGGGCGTTGTGACTTCTGTTTCTAGAATGGGTGTGGGATCTAAAGAAGAGGTTGAAGCATGGAACAAGGATAATGCTAAGGCTTTGCATATTATTCAACTAGCATGCGGATCAGAAAATCTTACTCACATTAGAGATTATCATACTGCTAAAGAAGCTTGGAATTATTTTAGTGCATCATACAGCTCAGAATTGAAAGCCGAATCAGACATTGAACAAGGTGTGGTAGACGATAGTCTCCTTCACTATAGATCACTCCATAGGTTTATTGAGAGCGGTAATTGGAATGATGCAAAAGCATTCATGAATAGGGATGAAACATCTATGTTTTCCACATCTTCTTCGGGAAGGACTATTCTTCATGTTGCAGTGATTGCTGGTCACGAAAAAATTGTGAAGAAATTGGTGAAGGAAGGGAAAGATAGGTTAGTGAAAATGAAAGACAATCGTGGTTACACAGCCCTAGCTCTTGTTGCTGAGTTGACGGGAAATACCAATATAGCAAAGTGTTTGGTAGAGAAGAAGGGAGGGCAGGTAGTTGGACAAGACTTGTTATCTATGAAGACCAATGATGGTGAAATTCCTGTTCTTCTTGCAGCCGCTAAGGGACACAAAGAAATGACTAGTTATCTTTTTCCTAGAACTCGGTTGGAAGAAATGACAGATAAAAATTTCCACAATGGTGTTTTGCTTCTAACCCGATGTATCAATGCAGAAATATTTGGTGTGGCTTTGAGTTTACTCCAACGATTCCCGCAATTGCCACTTGCCCACAAATCCGAATCTGAAACTGAATCAGATGGCGTGCAACCCTTATATGCATTGGCACGCATGCCTTCTGTGTTCCCAAGTGGCAATAGATATGGATTCATACGGAGATTCCTTTACAAAATTTTGAGATTACCAGACATAAAAATTGTATCAAATGTTGTTCTAAAGGAAAAACAACTCAAAACATCTTTCACAGGAAGGATCTTTGGATGGATGTTCAATATTTTGAAAATTTCGCAAGTACATCTCTTGGGTCGGATACTTGTACATATTCACATGTCATTTCAGGATTTAGCAATATTAAAATTGTCTGCAATAAGAGAAATATACAATCAGAAAATGACGCACCGTCTAGTGCTTGAAATATTGAATTGCTTGTACCAAAAAATTCAAGAATTTAAGGAATCTGAACTGAGAGAGGCTTCAGCGTACGATGCAATGTTGCAAGCAGCTAAGCATGGAAATATTGAGTTCATAGATGCAATGAGGAAAGCTAACCCTGACCTATTATGGGCTATTGATAAAAATAAGAGAGGTATATTTTCACACGCAATTTTGAACCGTAGAAAAGAAGTCTTCCAACTCATACATGATAAAACTGTAAATGGACGGAAGGAGATTGTTAGATGTCGTGTAGATGCATTTGATAATACCCTCTTGCATCTGGCTGGAAATTTAGGGCCTTCCTCTGATCTTCACCGAAGATCTGGTCCTGCTCTCCAAATGCAAAGAGAAATTTTATGGTTTCAGGCTGTGGAGAAAATTGTTCACCCCAAGTGTAAGGAAGCCAAAAATGTAGAAGATAAGAAGCCTCGTGAGATATTTACCGAAAGCCACAAGGAGCTAGTGAAAGTAGGGGAAAAATGGGCAAAAGATACAGCTGGTTCATTTACACTTGTTGCTACACTCATCACAACCATCATGTTCGCTGCAGCTTTCACAGTCCCTGGTGGAAACAATCAAGACAGTGGAATTCCCCTCTTCTTGAAGGACAAAACATTTAATGTGTTTATAATAGCAGATGCAATATCTCTTTTCACTTCTTCAACTTCAGTCCTGCTATTCATTGGAATTCTAACGGCGCGTTATGCAGAAAAGGATTTCCTAAAGTCTCTGCCGCTTAAGTTACTTTTTGCCCTGATTATGCTTTTCTTCTCTGTGGTGTCCATGATGGTTGCTTTCTGTGCTTCACTTGCTATGCTCTTAAAGGGACATCAAGGAGTCATAATAACAGCTATGTCATTTGCCAGTATTCCGGTGATTGTTCTTGTACCTTCACAGTTGCGACTCTTCATTGAGATTTTCAAGTCTACAGTATTGTCCAAATGA
Protein sequence

>Msa0840960

MASIAASGIVLEPLTKDNYDNWSCLVRNYLAGHDLWGVVTSVSRMGVGSKEEVEAWNKDNAKALHIIQLACGSENLTHIRDYHTAKEAWNYFSASYSSELKAESDIEQGVVDDSLLHYRSLHRFIESGNWNDAKAFMNRDETSMFSTSSSGRTILHVAVIAGHEKIVKKLVKEGKDRLVKMKDNRGYTALALVAELTGNTNIAKCLVEKKGGQVVGQDLLSMKTNDGEIPVLLAAAKGHKEMTSYLFPRTRLEEMTDKNFHNGVLLLTRCINAEIFGVALSLLQRFPQLPLAHKSESETESDGVQPLYALARMPSVFPSGNRYGFIRRFLYKILRLPDIKIVSNVVLKEKQLKTSFTGRIFGWMFNILKISQVHLLGRILVHIHMSFQDLAILKLSAIREIYNQKMTHRLVLEILNCLYQKIQEFKESELREASAYDAMLQAAKHGNIEFIDAMRKANPDLLWAIDKNKRGIFSHAILNRRKEVFQLIHDKTVNGRKEIVRCRVDAFDNTLLHLAGNLGPSSDLHRRSGPALQMQREILWFQAVEKIVHPKCKEAKNVEDKKPREIFTESHKELVKVGEKWAKDTAGSFTLVATLITTIMFAAAFTVPGGNNQDSGIPLFLKDKTFNVFIIADAISLFTSSTSVLLFIGILTARYAEKDFLKSLPLKLLFALIMLFFSVVSMMVAFCASLAMLLKGHQGVIITAMSFASIPVIVLVPSQLRLFIEIFKSTVLSK*