AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0802560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802560 MtrunA17_Chr5g0410341 68.849 443 113 5 3 422 101 541 0.0 611
Msa0802560 MtrunA17_Chr5g0410341 91.176 102 9 0 422 523 645 746 2.21e-50 184
Msa0802560 MtrunA17_Chr5g0410171 70.698 430 112 4 3 422 104 529 0.0 598
Msa0802560 MtrunA17_Chr5g0410171 88.119 101 12 0 422 522 633 733 5.24e-49 180
Msa0802560 MtrunA17_Chr5g0410291 87.245 196 21 1 41 236 1 192 3.57e-123 359
Msa0802560 MtrunA17_Chr5g0410211 85.787 197 27 1 41 236 1 197 3.31e-118 346
Msa0802560 MtrunA17_Chr6g0456101 41.687 415 210 12 25 424 141 538 1.35e-83 275
Msa0802560 MtrunA17_Chr6g0456101 57.831 83 35 0 434 516 652 734 1.18e-22 102
Msa0802560 MtrunA17_Chr6g0457101 39.904 416 189 12 25 424 115 485 1.38e-80 265
Msa0802560 MtrunA17_Chr6g0457101 53.922 102 47 0 422 523 587 688 8.61e-22 99.4
Msa0802560 MtrunA17_Chr5g0410201 95.122 123 6 0 300 422 1 123 1.18e-79 252
Msa0802560 MtrunA17_Chr5g0410201 95.146 103 5 0 422 524 227 329 2.58e-56 191
Msa0802560 MtrunA17_Chr5g0410271 92.562 121 9 0 302 422 2 122 1.74e-75 241
Msa0802560 MtrunA17_Chr5g0410271 95.146 103 5 0 422 524 226 328 3.34e-57 193
Msa0802560 MtrunA17_Chr5g0410581 37.585 439 214 16 22 416 159 581 3.89e-61 214
Msa0802560 MtrunA17_Chr5g0410581 45.714 105 52 1 422 521 691 795 1.96e-17 85.9
Msa0802560 MtrunA17_Chr5g0410181 88.350 103 12 0 422 524 33 135 3.27e-55 181
Msa0802560 MtrunA17_Chr5g0410381 43.678 261 113 6 11 249 1 249 4.00e-55 185
Msa0802560 MtrunA17_Chr5g0410191 86.275 102 14 0 422 523 92 193 1.28e-50 172
Msa0802560 MtrunA17_Chr5g0410461 40.304 263 96 6 217 424 1 257 1.33e-46 169
Msa0802560 MtrunA17_Chr5g0410461 59.615 104 37 2 422 520 359 462 1.80e-23 103
Msa0802560 MtrunA17_Chr6g0456141 54.839 155 63 4 274 424 30 181 8.30e-45 162
Msa0802560 MtrunA17_Chr6g0456141 54.902 102 46 0 422 523 283 384 1.88e-27 114
Msa0802560 MtrunA17_Chr5g0410411 52.113 142 65 2 45 185 171 310 9.29e-34 130
Msa0802560 MtrunA17_Chr6g0456151 43.548 186 90 5 1 181 112 287 1.04e-33 129
Msa0802560 MtrunA17_Chr5g0410501 37.175 269 138 8 204 444 39 304 1.85e-33 129
Msa0802560 MtrunA17_Chr5g0410371 65.217 92 30 1 333 424 1 90 5.04e-30 119
Msa0802560 MtrunA17_Chr5g0410371 66.019 103 31 1 422 520 192 294 5.50e-28 114
Msa0802560 MtrunA17_Chr5g0410471 53.636 110 49 1 45 154 205 312 6.44e-28 114
Msa0802560 MtrunA17_Chr2g0297701 27.723 404 205 14 25 424 48 368 4.59e-26 112
Msa0802560 MtrunA17_Chr2g0297701 42.453 106 52 3 422 522 470 571 4.28e-16 81.3
Msa0802560 MtrunA17_Chr5g0410561 48.092 131 63 3 51 181 89 214 8.30e-23 96.7
Msa0802560 MtrunA17_Chr5g0410451 40.650 123 61 2 411 521 113 235 2.71e-21 93.2
Msa0802560 MtrunA17_Chr5g0410541 48.571 105 49 2 422 521 112 216 6.00e-21 91.7
Msa0802560 MtrunA17_Chr3g0096941 24.433 397 249 13 21 410 32 384 7.61e-21 96.3
Msa0802560 MtrunA17_Chr5g0443001 24.250 400 258 12 21 413 30 391 3.16e-19 91.3
Msa0802560 MtrunA17_Chr5g0443001 45.192 104 56 1 422 524 502 605 5.42e-17 84.0
Msa0802560 MtrunA17_Chr5g0410551 54.118 85 36 2 333 416 1 83 7.30e-19 82.8
Msa0802560 MtrunA17_Chr3g0100741 23.678 397 251 12 21 410 32 383 2.30e-18 88.6
Msa0802560 MtrunA17_Chr2g0297491 44.000 100 55 1 422 520 278 377 7.53e-17 82.8
Msa0802560 MtrunA17_Chr2g0297491 30.370 135 87 2 295 424 45 177 5.75e-11 64.3
Msa0802560 MtrunA17_Chr3g0102001 29.386 228 137 7 25 238 22 239 1.43e-16 83.2
Msa0802560 MtrunA17_Chr2g0297481 41.228 114 62 3 414 524 364 475 1.02e-15 79.7
Msa0802560 MtrunA17_Chr2g0286551 24.703 421 233 13 57 410 42 445 2.02e-15 79.3
Msa0802560 MtrunA17_Chr2g0297681 40.404 99 58 1 422 519 590 688 2.80e-14 75.9
Msa0802560 MtrunA17_Chr2g0297691 40.385 104 53 3 422 520 592 691 7.79e-14 74.3
Msa0802560 MtrunA17_Chr3g0098541 29.381 194 115 6 57 238 9 192 1.09e-13 72.8
Msa0802560 MtrunA17_Chr5g0410441 48.718 78 37 2 348 424 1 76 4.67e-13 65.9
Msa0802560 MtrunA17_Chr2g0297651 39.000 100 60 1 422 520 591 690 7.20e-13 71.2
Msa0802560 MtrunA17_Chr2g0297711 30.921 152 93 5 32 182 58 198 2.16e-12 69.3
Msa0802560 MtrunA17_Chr3g0100301 37.895 95 52 1 422 516 310 397 2.96e-12 68.6
Msa0802560 MtrunA17_Chr2g0286571 25.893 224 143 8 20 235 4 212 3.02e-12 67.8
Msa0802560 MtrunA17_Chr2g0286601 25.893 224 143 8 20 235 4 212 3.59e-12 68.9
Msa0802560 MtrunA17_Chr2g0286601 39.326 89 47 1 414 502 572 653 1.05e-11 67.4
Msa0802560 MtrunA17_Chr5g0410511 35.455 110 66 1 417 521 87 196 1.02e-11 64.3
Msa0802560 MtrunA17_Chr3g0098291 31.217 189 112 7 55 236 56 233 1.08e-11 65.1
Msa0802560 MtrunA17_Chr1g0211541 29.474 190 113 8 32 216 6 179 1.85e-11 66.6
Msa0802560 MtrunA17_Chr1g0211531 27.895 190 121 7 31 218 29 204 3.73e-11 65.5
Msa0802560 MtrunA17_Chr2g0284541 23.342 407 237 13 57 407 37 424 7.74e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0802560 AT3G18670.2 30.221 407 251 10 22 419 50 432 2.42e-56 199
Msa0802560 AT3G18670.2 47.525 101 50 2 422 520 539 638 2.61e-17 85.5
Msa0802560 AT5G04690.2 26.877 413 255 9 13 418 67 439 4.88e-31 127
Msa0802560 AT5G04690.2 42.424 99 56 1 422 520 548 645 1.49e-13 73.9
Msa0802560 AT3G18670.1 34.667 225 122 9 22 237 50 258 6.30e-28 118
Msa0802560 AT3G18670.1 24.688 320 200 7 123 419 76 377 5.67e-18 87.8
Msa0802560 AT3G18670.1 47.525 101 50 2 422 520 484 583 2.69e-17 85.5
Msa0802560 AT5G04690.3 26.329 414 242 11 13 418 67 425 3.40e-27 116
Msa0802560 AT5G04690.3 42.424 99 56 1 422 520 534 631 1.42e-13 73.9
Msa0802560 AT5G04700.2 26.551 403 256 8 21 418 80 447 5.41e-27 114
Msa0802560 AT5G04700.1 26.683 401 258 8 21 418 80 447 5.48e-27 115
Msa0802560 AT5G04700.1 43.000 100 56 1 422 520 556 655 1.78e-14 76.6
Msa0802560 AT5G04680.1 25.792 442 277 13 6 418 44 463 7.58e-25 109
Msa0802560 AT5G04680.1 37.374 99 62 0 422 520 581 679 2.36e-12 70.1
Msa0802560 AT5G04680.4 26.353 425 267 12 6 418 44 434 3.33e-24 107
Msa0802560 AT5G04680.4 37.374 99 62 0 422 520 552 650 2.05e-12 70.1
Msa0802560 AT5G04690.1 25.245 408 234 8 13 418 67 405 4.55e-24 106
Msa0802560 AT5G04690.1 42.424 99 56 1 422 520 514 611 1.58e-13 73.6
Msa0802560 AT5G04680.2 27.326 344 204 10 82 418 7 311 1.86e-21 98.2
Msa0802560 AT5G04680.2 37.374 99 62 0 422 520 429 527 3.12e-12 69.3
Msa0802560 AT5G04730.1 25.135 370 224 12 69 424 58 388 2.92e-18 88.6
Msa0802560 AT5G04730.1 36.697 109 65 1 416 520 480 588 3.41e-13 72.8
Msa0802560 AT3G54070.1 29.143 175 108 6 21 189 49 213 4.53e-14 72.8
Msa0802560 AT5G35810.1 36.538 104 65 1 422 524 232 335 1.31e-12 69.7
Msa0802560 AT5G04680.3 37.374 99 62 0 422 520 538 636 1.88e-12 70.5
Msa0802560 AT3G54065.1 44.776 67 37 0 417 483 113 179 5.85e-12 66.2

Find 100 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATCTGGCTGGAAATTT+AGG 0.125517 5_3:-17011029 Msa0802560:CDS
AAGCTAACCCTGACCTATTA+TGG 0.190354 5_3:-17011196 Msa0802560:CDS
TACCAAACACTTTGCTATAT+TGG 0.211568 5_3:+17013537 None:intergenic
ATACATGATAAAACTGTAAA+TGG 0.215912 5_3:-17011101 Msa0802560:CDS
TTCACTTGCTATGCTCTTAA+AGG 0.220345 5_3:-17007449 Msa0802560:CDS
ACATATTCACATGTCATTTC+AGG 0.226779 5_3:-17012077 Msa0802560:CDS
ATTTCTTCCAACCGAGTTCT+AGG 0.242650 5_3:+17013394 None:intergenic
CATGCGTGCCAATGCATATA+AGG 0.246329 5_3:+17013131 None:intergenic
ATAAAAGTGCAAAACTTATA+TGG 0.270625 5_3:-17012874 Msa0802560:CDS
TGTATCAATGCAGAAATATT+TGG 0.271929 5_3:-17013328 Msa0802560:intron
TGCATCTGGCTGGAAATTTA+GGG 0.279473 5_3:-17011028 Msa0802560:CDS
GGTTTATTGAGAGCGGTAAT+TGG 0.301812 5_3:-17013768 Msa0802560:CDS
ATGCAAAAGCATTCATGAAT+AGG 0.306685 5_3:-17013741 Msa0802560:CDS
ACTTAAGCGGCAGAGACTTT+AGG 0.331258 5_3:+17007533 None:intergenic
ACTTCAGTCCTGCTATTCAT+TGG 0.354216 5_3:-17007589 Msa0802560:CDS
CTTCTCTGTGGTGTCCATGA+TGG 0.354652 5_3:-17007485 Msa0802560:CDS
ACTAATCAGTAAGTTTCATT+TGG 0.359252 5_3:+17007315 None:intergenic
TGTATCAATTGTTGTTCTAA+AGG 0.363281 5_3:-17012839 Msa0802560:CDS
CAGAGAAGAAAAGCATAATC+AGG 0.369758 5_3:+17007500 None:intergenic
AACAGGAATTTCACCATCAT+TGG 0.371227 5_3:+17013465 None:intergenic
TGATAATACCCTCTTGCATC+TGG 0.372207 5_3:-17011042 Msa0802560:CDS
TATGTCATTTGCCAGTATTC+CGG 0.372475 5_3:-17007401 Msa0802560:CDS
TGTGGGCAAGTGGCAATTGC+GGG 0.384511 5_3:+17013190 None:intergenic
CTTCATGTTGCAGTGATTGC+TGG 0.392823 5_3:-17013673 Msa0802560:CDS
TCAATAGCCCATAATAGGTC+AGG 0.405110 5_3:+17011188 None:intergenic
AAAGTGTTTGGTAGAGAAGA+AGG 0.405299 5_3:-17013527 Msa0802560:CDS
AAGAACAATCACCGGAATAC+TGG 0.406609 5_3:+17007390 None:intergenic
ATCTGATTCAGTTTCAGATT+CGG 0.409441 5_3:+17013164 None:intergenic
TTCCCAAGTGGCAATAGATA+TGG 0.413602 5_3:-17013099 Msa0802560:CDS
TTAGCAATATTAAAATTGTC+TGG 0.415689 5_3:-17012052 Msa0802560:intron
CATTTCTTTGTGTCCCTTAG+CGG 0.426364 5_3:+17013432 None:intergenic
TCACTTGCTATGCTCTTAAA+GGG 0.427681 5_3:-17007448 Msa0802560:CDS
CAGTTTCAGATTCGGATTTG+TGG 0.429263 5_3:+17013172 None:intergenic
GCTCTTGTTGCTGAGTTGAC+TGG 0.432007 5_3:-17013565 Msa0802560:CDS
TGGTGAAGGAAGGGAAAGAT+AGG 0.434543 5_3:-17013627 Msa0802560:CDS
TACCAATATAGCAAAGTGTT+TGG 0.435024 5_3:-17013539 Msa0802560:CDS
AAGAAGGGAGGGCAGGTAGT+TGG 0.435320 5_3:-17013511 Msa0802560:CDS
TGTTCTTCTTGCAGCCGCTA+AGG 0.442297 5_3:-17013446 Msa0802560:CDS
TCTGATCTTCACCGAAGATC+TGG 0.442488 5_3:-17010999 Msa0802560:intron
AGTTTCAGATTCGGATTTGT+GGG 0.445354 5_3:+17013173 None:intergenic
TAAAAGTGCAAAACTTATAT+GGG 0.449997 5_3:-17012873 Msa0802560:CDS
TGCAAAAGCATTCATGAATA+GGG 0.450302 5_3:-17013740 Msa0802560:CDS
TTAGCGGCTGCAAGAAGAAC+AGG 0.452684 5_3:+17013448 None:intergenic
AGCTAACCCTGACCTATTAT+GGG 0.458098 5_3:-17011195 Msa0802560:CDS
TATTTCTGCATTGATACATC+GGG 0.460797 5_3:+17013333 None:intergenic
GGTAGAGAAGAAGGGAGGGC+AGG 0.472180 5_3:-17013518 Msa0802560:CDS
GGAGAGCAGGACCAGATCTT+CGG 0.475928 5_3:+17010988 None:intergenic
GTTCTTCTTGCAGCCGCTAA+GGG 0.477882 5_3:-17013445 Msa0802560:CDS
TCAACTCAGCAACAAGAGCT+AGG 0.480624 5_3:+17013569 None:intergenic
GTGGCAATTGCGGGAATCGT+TGG 0.487167 5_3:+17013199 None:intergenic
GTGAAGAAATTGGTGAAGGA+AGG 0.488215 5_3:-17013637 Msa0802560:CDS
AATACCCTCTTGCATCTGGC+TGG 0.489835 5_3:-17011038 Msa0802560:CDS
TACCGCTCTCAATAAACCTA+TGG 0.496198 5_3:+17013773 None:intergenic
AACGGCGCGTTATGCAGAAA+AGG 0.500771 5_3:-17007560 Msa0802560:CDS
ATATTTCTGCATTGATACAT+CGG 0.510537 5_3:+17013332 None:intergenic
ATCCATATCTATTGCCACTT+GGG 0.515490 5_3:+17013097 None:intergenic
ATGCGTGCCAATGCATATAA+GGG 0.517366 5_3:+17013132 None:intergenic
TTAGAATTCCAATGAATAGC+AGG 0.532264 5_3:+17007581 None:intergenic
CGTGCAACCCTTATATGCAT+TGG 0.533202 5_3:-17013139 Msa0802560:CDS
GTTTGGTAGAGAAGAAGGGA+GGG 0.534499 5_3:-17013522 Msa0802560:CDS
TTGTGGGCAAGTGGCAATTG+CGG 0.539731 5_3:+17013189 None:intergenic
AAGTGTTTGGTAGAGAAGAA+GGG 0.539988 5_3:-17013526 Msa0802560:CDS
TGTTTGGTAGAGAAGAAGGG+AGG 0.542467 5_3:-17013523 Msa0802560:CDS
AATCCATATCTATTGCCACT+TGG 0.556724 5_3:+17013096 None:intergenic
GCAATAGATATGGATTCATA+CGG 0.560821 5_3:-17013089 Msa0802560:CDS
GCTATTCATTGGAATTCTAA+CGG 0.563684 5_3:-17007578 Msa0802560:CDS
CCAGAAAATGAGATTATGAC+GGG 0.568037 5_3:-17014685 Msa0802560:intron
TAAGGAATCTGAACTGAGAG+AGG 0.568722 5_3:-17011288 Msa0802560:CDS
CTCCATAGGTTTATTGAGAG+CGG 0.570313 5_3:-17013775 Msa0802560:CDS
GATTCGGATTTGTGGGCAAG+TGG 0.570721 5_3:+17013180 None:intergenic
TGAAGAAATTGGTGAAGGAA+GGG 0.574748 5_3:-17013636 Msa0802560:CDS
TTTCCACGTCTTCTTCGGGA+AGG 0.575968 5_3:-17013702 Msa0802560:CDS
CAACTCAAAACATCTTTCAC+AGG 0.580981 5_3:-17012811 Msa0802560:intron
ATGCTCTTAAAGGGACATCA+AGG 0.582246 5_3:-17007439 Msa0802560:CDS
TTATCTATGAAGACCAATGA+TGG 0.582929 5_3:-17013478 Msa0802560:CDS
AGCACAGAAAGCAACCATCA+TGG 0.585868 5_3:+17007471 None:intergenic
ATGTTGCAAGCAGCTAAGCA+TGG 0.587732 5_3:-17011248 Msa0802560:CDS
TTGCCACTTGGGAACACAGA+AGG 0.594143 5_3:+17013108 None:intergenic
CAACTCAGCAACAAGAGCTA+GGG 0.594380 5_3:+17013570 None:intergenic
GAATCTGAAACTGAATCAGA+TGG 0.598732 5_3:-17013162 Msa0802560:CDS
ATGATAAAACTGTAAATGGA+CGG 0.602518 5_3:-17011097 Msa0802560:CDS
AATTGTGAAGAAATTGGTGA+AGG 0.605805 5_3:-17013641 Msa0802560:CDS
AGTCCTTCCCGAAGAAGACG+TGG 0.609112 5_3:+17013699 None:intergenic
CAATAGCCCATAATAGGTCA+GGG 0.609144 5_3:+17011189 None:intergenic
AGAGAAGAAAAGCATAATCA+GGG 0.609965 5_3:+17007501 None:intergenic
TAAAACTGTAAATGGACGGA+AGG 0.611261 5_3:-17011093 Msa0802560:CDS
TCAATATTTCAAGCACTAGA+CGG 0.613649 5_3:+17011339 None:intergenic
ATGAAGAGTCGCAACTGTGA+AGG 0.615755 5_3:+17007364 None:intergenic
TTCACTATAGATCACTCCAT+AGG 0.620086 5_3:-17013789 Msa0802560:CDS
GCCAGAAAATGAGATTATGA+CGG 0.621282 5_3:-17014686 Msa0802560:CDS
AGATCTTCGGTGAAGATCAG+AGG 0.623561 5_3:+17011001 None:intergenic
GAAGGTACAAGAACAATCAC+CGG 0.632232 5_3:+17007382 None:intergenic
ATGCCTTCTGTGTTCCCAAG+TGG 0.637179 5_3:-17013111 Msa0802560:CDS
TATGGAGTGATCTATAGTGA+AGG 0.637838 5_3:+17013791 None:intergenic
AATTTCCAGCCAGATGCAAG+AGG 0.644750 5_3:+17011033 None:intergenic
ATTTCCAGCCAGATGCAAGA+GGG 0.653848 5_3:+17011034 None:intergenic
CTTCGGTGAAGATCAGAGGA+AGG 0.655276 5_3:+17011005 None:intergenic
TTGAGTTCATAGATGCAATG+AGG 0.660248 5_3:-17011220 Msa0802560:CDS
GTGAAAATGAAAGACAATCG+TGG 0.663038 5_3:-17013601 Msa0802560:CDS
TTAGAAGCAAAACACCATTG+TGG 0.726643 5_3:+17013356 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGTTTAATTAATGTTAA+TGG - chr5_3:17008752-17008771 Msa0802560:intron 10.0%
!! TAAATGAAAGTTATTAAAAA+TGG + chr5_3:17009917-17009936 None:intergenic 10.0%
!!! TTTTCTTTCTTTTTAAAGTT+TGG + chr5_3:17007405-17007424 None:intergenic 15.0%
!!! TAAAATATATGTTAATTTGC+AGG - chr5_3:17008198-17008217 Msa0802560:intron 15.0%
!!! GTCTATATCTTTTTTATTAT+CGG - chr5_3:17008984-17009003 Msa0802560:intron 15.0%
!!! ATATTTTTACTTTGCATTTA+TGG + chr5_3:17009027-17009046 None:intergenic 15.0%
!! TTTAATACAAGTATGATTTA+AGG - chr5_3:17009078-17009097 Msa0802560:intron 15.0%
!!! ATAAATTGTTTAATTTGCTA+TGG + chr5_3:17009597-17009616 None:intergenic 15.0%
!!! TTTTAATAACTTTCATTTAC+AGG - chr5_3:17009918-17009937 Msa0802560:intron 15.0%
!! AACAAAAATTGAAACAAAAA+GGG + chr5_3:17012014-17012033 None:intergenic 15.0%
!! CATAACTCTTTATAAAAGAT+GGG + chr5_3:17008036-17008055 None:intergenic 20.0%
!!! ATATAGACTTACTTTTGTAA+AGG + chr5_3:17008972-17008991 None:intergenic 20.0%
!!! ATAAAAGTGCAAAACTTATA+TGG - chr5_3:17009156-17009175 Msa0802560:intron 20.0%
!!! TAAAAGTGCAAAACTTATAT+GGG - chr5_3:17009157-17009176 Msa0802560:intron 20.0%
!! TTAGCAATATTAAAATTGTC+TGG - chr5_3:17009978-17009997 Msa0802560:intron 20.0%
!! AAGTAGTTATAACTTAGTAT+AGG - chr5_3:17010087-17010106 Msa0802560:intron 20.0%
!!! CTTTTCTACAACTTATTATA+TGG + chr5_3:17010512-17010531 None:intergenic 20.0%
!! ATAATAAGTTGTAGAAAAGT+AGG - chr5_3:17010513-17010532 Msa0802560:intron 20.0%
!! TAATAAGTTGTAGAAAAGTA+GGG - chr5_3:17010514-17010533 Msa0802560:intron 20.0%
!!! CCTTAAATTCTTGAATTTTT+TGG + chr5_3:17010727-17010746 None:intergenic 20.0%
!! CCAAAAAATTCAAGAATTTA+AGG - chr5_3:17010724-17010743 Msa0802560:intron 20.0%
!! ATACATGATAAAACTGTAAA+TGG - chr5_3:17010929-17010948 Msa0802560:intron 20.0%
!! ATAAAATTTCTCTTTGCATT+TGG + chr5_3:17011066-17011085 None:intergenic 20.0%
!!! AAATGCAAAGAGAAATTTTA+TGG - chr5_3:17011065-17011084 Msa0802560:CDS 20.0%
!! TAACATAAGGTTTATCAAAT+AGG + chr5_3:17011160-17011179 None:intergenic 20.0%
!! AATCAAGATCTTATAACATA+AGG + chr5_3:17011173-17011192 None:intergenic 20.0%
!! TATGATAAAGTTTATATGCT+TGG + chr5_3:17011207-17011226 None:intergenic 20.0%
!! TAAACTTTATCATAGCATAA+TGG - chr5_3:17011213-17011232 Msa0802560:CDS 20.0%
!! AAACTTTATCATAGCATAAT+GGG - chr5_3:17011214-17011233 Msa0802560:CDS 20.0%
!! GAACAAAAATTGAAACAAAA+AGG + chr5_3:17012015-17012034 None:intergenic 20.0%
!! TGAAAATTGCAATTGTAAAT+GGG + chr5_3:17012616-17012635 None:intergenic 20.0%
!! ATGAAAATTGCAATTGTAAA+TGG + chr5_3:17012617-17012636 None:intergenic 20.0%
!!! TAATTTTTTTTCTGGTACAA+AGG - chr5_3:17012781-17012800 Msa0802560:intron 20.0%
!!! ATACATTTGAAGTATTATTG+AGG - chr5_3:17013874-17013893 Msa0802560:intron 20.0%
!!! TTTTAGAGGATGTATCTTTA+TGG + chr5_3:17007691-17007710 None:intergenic 25.0%
! ATATTGTTAGACATCATAGA+AGG + chr5_3:17007885-17007904 None:intergenic 25.0%
!!! ATCCTTTTTTTTCTTCTTTC+CGG + chr5_3:17007976-17007995 None:intergenic 25.0%
! CCATAACTCTTTATAAAAGA+TGG + chr5_3:17008037-17008056 None:intergenic 25.0%
!! CCATCTTTTATAAAGAGTTA+TGG - chr5_3:17008034-17008053 Msa0802560:intron 25.0%
! CGAAAAAATTGTGAAGAAAT+TGG - chr5_3:17008383-17008402 Msa0802560:intron 25.0%
! ACAGATAAAAATTTCCACAA+TGG - chr5_3:17008660-17008679 Msa0802560:intron 25.0%
!! ATATTTCTGCATTGATACAT+CGG + chr5_3:17008701-17008720 None:intergenic 25.0%
! TGTATCAATGCAGAAATATT+TGG - chr5_3:17008702-17008721 Msa0802560:intron 25.0%
! ACTGAATCAAATATATGTCA+CGG + chr5_3:17008732-17008751 None:intergenic 25.0%
! TTACTTTGCATTTATGGTAA+TGG + chr5_3:17009021-17009040 None:intergenic 25.0%
! AAATATACTAGTGTTTCCTA+TGG - chr5_3:17009041-17009060 Msa0802560:intron 25.0%
!! TGTATCAATTGTTGTTCTAA+AGG - chr5_3:17009191-17009210 Msa0802560:intron 25.0%
! CCTAAAAAAAACTTGATGAA+AGG + chr5_3:17009403-17009422 None:intergenic 25.0%
!!! CCTTTCATCAAGTTTTTTTT+AGG - chr5_3:17009400-17009419 Msa0802560:intron 25.0%
!! AGATTTAGAACATTTCATTC+AGG + chr5_3:17009638-17009657 None:intergenic 25.0%
! AATAACTTTCATTTACAGGT+CGG - chr5_3:17009922-17009941 Msa0802560:intron 25.0%
!! GTAATGTGTTTTCATAATGA+TGG - chr5_3:17010119-17010138 Msa0802560:intron 25.0%
! TAAAATGCCAAACTTGAATT+TGG + chr5_3:17010339-17010358 None:intergenic 25.0%
!! TTTTATCAATAGCCCATAAT+AGG + chr5_3:17010850-17010869 None:intergenic 25.0%
! GCTATTGATAAAAATAAGAG+AGG - chr5_3:17010857-17010876 Msa0802560:intron 25.0%
! ATGATAAAACTGTAAATGGA+CGG - chr5_3:17010933-17010952 Msa0802560:intron 25.0%
!! AAGAGAAATTTTATGGTTTC+AGG - chr5_3:17011072-17011091 Msa0802560:CDS 25.0%
!! CTTCTTATCTTCTACATTTT+TGG + chr5_3:17011287-17011306 None:intergenic 25.0%
!! TACAATAAAAGAGTACATCA+AGG + chr5_3:17011534-17011553 None:intergenic 25.0%
! AAATAGATCGATATGAATCA+AGG + chr5_3:17012115-17012134 None:intergenic 25.0%
! AATCAAAAATGAATACGAGA+AGG + chr5_3:17012194-17012213 None:intergenic 25.0%
! ATTGTATTTCACACTCAAAT+TGG - chr5_3:17012635-17012654 Msa0802560:intron 25.0%
!!! ACGTAGGTTAATTTTTTTTC+TGG - chr5_3:17012773-17012792 Msa0802560:intron 25.0%
! TTGAAGATCATTAAGAACTT+TGG - chr5_3:17012828-17012847 Msa0802560:CDS 25.0%
! TTGAAGACAAATTTGTGTTT+AGG - chr5_3:17012931-17012950 Msa0802560:intron 25.0%
! ATTCATTACCTCTTTCTATT+TGG - chr5_3:17013051-17013070 Msa0802560:intron 25.0%
! ATTCATTACCTCTTTCTATT+TGG - chr5_3:17013051-17013070 Msa0802560:intron 25.0%
!! TACAATAAAAGAGTACATCA+AGG + chr5_3:17011534-17011553 None:intergenic 25.0%
!!! ATTGTTTCTGTTAGTAAACA+TGG + chr5_3:17014334-17014353 None:intergenic 25.0%
AGAAAATGGTGTTTCTTATG+TGG + chr5_3:17007431-17007450 None:intergenic 30.0%
! CCTTTTATTCTAATGTGTTG+CGG + chr5_3:17007462-17007481 None:intergenic 30.0%
TGATTCTTTCGGTAGTTATA+TGG + chr5_3:17007491-17007510 None:intergenic 30.0%
CTCTAAGTTCATCAATCTAA+GGG - chr5_3:17007739-17007758 Msa0802560:intron 30.0%
! CTTCATAAGCATTTTTCCAT+GGG + chr5_3:17007851-17007870 None:intergenic 30.0%
! ACTTCATAAGCATTTTTCCA+TGG + chr5_3:17007852-17007871 None:intergenic 30.0%
CTCTTTATAAAAGATGGGTA+CGG + chr5_3:17008031-17008050 None:intergenic 30.0%
ATTATTACGTGTTAGTACGT+TGG - chr5_3:17008066-17008085 Msa0802560:intron 30.0%
TTATTACGTGTTAGTACGTT+GGG - chr5_3:17008067-17008086 Msa0802560:intron 30.0%
! ATAGTATCACTAGTGTGTTT+TGG + chr5_3:17008101-17008120 None:intergenic 30.0%
!! TATATGTTAATTTGCAGGTG+TGG - chr5_3:17008203-17008222 Msa0802560:intron 30.0%
!! ATGCAAAAGCATTCATGAAT+AGG - chr5_3:17008289-17008308 Msa0802560:intron 30.0%
!! TGCAAAAGCATTCATGAATA+GGG - chr5_3:17008290-17008309 Msa0802560:intron 30.0%
AATTGTGAAGAAATTGGTGA+AGG - chr5_3:17008389-17008408 Msa0802560:intron 30.0%
! TACCAATATAGCAAAGTGTT+TGG - chr5_3:17008491-17008510 Msa0802560:intron 30.0%
! TACCAAACACTTTGCTATAT+TGG + chr5_3:17008496-17008515 None:intergenic 30.0%
TTATCTATGAAGACCAATGA+TGG - chr5_3:17008552-17008571 Msa0802560:intron 30.0%
! GTTATCTTTTTCCTAGAACT+CGG - chr5_3:17008625-17008644 Msa0802560:intron 30.0%
! TATTTCTGCATTGATACATC+GGG + chr5_3:17008700-17008719 None:intergenic 30.0%
ATGCTGATATGTTGTCAATT+AGG - chr5_3:17008790-17008809 Msa0802560:intron 30.0%
ATCTGATTCAGTTTCAGATT+CGG + chr5_3:17008869-17008888 None:intergenic 30.0%
GCAATAGATATGGATTCATA+CGG - chr5_3:17008941-17008960 Msa0802560:intron 30.0%
! TTTAAGGTTAATGCAGAATC+AGG - chr5_3:17009094-17009113 Msa0802560:intron 30.0%
! AAGTTTTGCACTTTTATGTC+TGG + chr5_3:17009153-17009172 None:intergenic 30.0%
TAGAACATTTCATTCAGGTA+TGG + chr5_3:17009633-17009652 None:intergenic 30.0%
TCTTACTCTCTTTCTTCTTT+AGG - chr5_3:17009655-17009674 Msa0802560:intron 30.0%
TATATATATATGACGGCAGA+AGG + chr5_3:17009820-17009839 None:intergenic 30.0%
! ACATATTCACATGTCATTTC+AGG - chr5_3:17009953-17009972 Msa0802560:intron 30.0%
!!! TTTTTTCCTTATGTATCAGC+TGG - chr5_3:17010038-17010057 Msa0802560:intron 30.0%
! TGTTTTCATAATGATGGCTA+TGG - chr5_3:17010125-17010144 Msa0802560:intron 30.0%
TTGGCTTATAACAAACACAT+TGG + chr5_3:17010227-17010246 None:intergenic 30.0%
!! ATGTGTTTGTTATAAGCCAA+TGG - chr5_3:17010227-17010246 Msa0802560:intron 30.0%
!! TGTGTTTGTTATAAGCCAAT+GGG - chr5_3:17010228-17010247 Msa0802560:intron 30.0%
ATATGGTAGCACTTTACTTT+GGG + chr5_3:17010495-17010514 None:intergenic 30.0%
TATATGGTAGCACTTTACTT+TGG + chr5_3:17010496-17010515 None:intergenic 30.0%
AAACACATACTACTTTGTTC+CGG + chr5_3:17010558-17010577 None:intergenic 30.0%
! ATTGCTGTTCATCATAGAAT+TGG + chr5_3:17010641-17010660 None:intergenic 30.0%
TCAATATTTCAAGCACTAGA+CGG + chr5_3:17010694-17010713 None:intergenic 30.0%
!! CAGTTTTATCATGTATGAGT+TGG + chr5_3:17010925-17010944 None:intergenic 30.0%
! AGGTTCTGATGAATAAACTA+TGG + chr5_3:17011140-17011159 None:intergenic 30.0%
ATTCTTAATAGTTTCCACCA+GGG + chr5_3:17011444-17011463 None:intergenic 30.0%
TATTCTTAATAGTTTCCACC+AGG + chr5_3:17011445-17011464 None:intergenic 30.0%
GTTAGTTAGAGCTAGTAATA+AGG - chr5_3:17011471-17011490 Msa0802560:intron 30.0%
GAGTATTAGTTACTAGTTAG+TGG - chr5_3:17011493-17011512 Msa0802560:intron 30.0%
TGATACCATGTTAGTAAACA+TGG + chr5_3:17011635-17011654 None:intergenic 30.0%
AAATTGCAATTGTAAATGGG+AGG + chr5_3:17012613-17012632 None:intergenic 30.0%
!! TTTTCCACTTTGAGTTTGAA+GGG - chr5_3:17012663-17012682 Msa0802560:intron 30.0%
!!! TTTTTTTCTGGTACAAAGGA+TGG - chr5_3:17012785-17012804 Msa0802560:intron 30.0%
! CTGTCAATTTGAAACATCAA+TGG - chr5_3:17012877-17012896 Msa0802560:CDS 30.0%
CAAATTTGTCTTCAATCTTG+TGG + chr5_3:17012926-17012945 None:intergenic 30.0%
!!! CTACTCTATTCTGTTTTGAT+GGG - chr5_3:17013171-17013190 Msa0802560:CDS 30.0%
TACTGCTTGAGATCAAATAT+TGG - chr5_3:17013683-17013702 Msa0802560:CDS 30.0%
! GATCAAATATTGGTTGGATT+TGG - chr5_3:17013693-17013712 Msa0802560:CDS 30.0%
! AATATTGGTTGGATTTGGTT+TGG - chr5_3:17013698-17013717 Msa0802560:CDS 30.0%
TGCTTACATATCTACTTTGT+TGG - chr5_3:17013734-17013753 Msa0802560:CDS 30.0%
!! ATTTTGCAAGATGTTTCTGT+TGG - chr5_3:17013943-17013962 Msa0802560:intron 30.0%
! CACATCAACTACTATCTTTT+TGG - chr5_3:17014032-17014051 Msa0802560:intron 30.0%
!!! GCATTTTAATTTCCTCTGTT+TGG - chr5_3:17014070-17014089 Msa0802560:intron 30.0%
GTTAGTTAGAGCTAGTAATA+AGG - chr5_3:17011471-17011490 Msa0802560:intron 30.0%
GAGTATTAGTTACTAGTTAG+TGG - chr5_3:17011493-17011512 Msa0802560:intron 30.0%
TTAGAATTCCAATGAATAGC+AGG + chr5_3:17014452-17014471 None:intergenic 30.0%
GCTATTCATTGGAATTCTAA+CGG - chr5_3:17014452-17014471 Msa0802560:intron 30.0%
! AGAGAAGAAAAGCATAATCA+GGG + chr5_3:17014532-17014551 None:intergenic 30.0%
GCCAGAAAATGAGATTATGA+CGG - chr5_3:17007344-17007363 Msa0802560:CDS 35.0%
CCAGAAAATGAGATTATGAC+GGG - chr5_3:17007345-17007364 Msa0802560:CDS 35.0%
!! AAAATGAGATTATGACGGGT+AGG - chr5_3:17007349-17007368 Msa0802560:CDS 35.0%
! TAGGCATCCTATCTTTGAAA+GGG - chr5_3:17007368-17007387 Msa0802560:CDS 35.0%
TTGCGGAATTCTCAAGAAAA+TGG + chr5_3:17007445-17007464 None:intergenic 35.0%
CCGCAACACATTAGAATAAA+AGG - chr5_3:17007459-17007478 Msa0802560:CDS 35.0%
AGATCTTTAGCGTTAGCTAA+AGG + chr5_3:17007568-17007587 None:intergenic 35.0%
TTATGATGTAGGATCTTGGT+TGG + chr5_3:17007617-17007636 None:intergenic 35.0%
TCAGTTATGATGTAGGATCT+TGG + chr5_3:17007621-17007640 None:intergenic 35.0%
CTAAAGAGGCAAAGTTGTTA+AGG + chr5_3:17007652-17007671 None:intergenic 35.0%
TGATATTCTCCTAGCTAAAG+AGG + chr5_3:17007666-17007685 None:intergenic 35.0%
TTGATGAACTTAGAGGTCTT+GGG + chr5_3:17007734-17007753 None:intergenic 35.0%
ATTGATGAACTTAGAGGTCT+TGG + chr5_3:17007735-17007754 None:intergenic 35.0%
CCTTAGATTGATGAACTTAG+AGG + chr5_3:17007741-17007760 None:intergenic 35.0%
CCTCTAAGTTCATCAATCTA+AGG - chr5_3:17007738-17007757 Msa0802560:intron 35.0%
AGTCTAGTGTTTGTAAGACT+CGG + chr5_3:17007788-17007807 None:intergenic 35.0%
AATCTCAGTAGGTGTCTTAA+AGG + chr5_3:17007908-17007927 None:intergenic 35.0%
!! TCTTTTCTGAGAATCTCAGT+AGG + chr5_3:17007919-17007938 None:intergenic 35.0%
GAGTTAAAAACTCTACTCAC+CGG - chr5_3:17007954-17007973 Msa0802560:intron 35.0%
CACCGGAAAGAAGAAAAAAA+AGG - chr5_3:17007971-17007990 Msa0802560:intron 35.0%
TATGGAGTGATCTATAGTGA+AGG + chr5_3:17008242-17008261 None:intergenic 35.0%
TTCACTATAGATCACTCCAT+AGG - chr5_3:17008241-17008260 Msa0802560:intron 35.0%
! TATGTTTTCCACGTCTTCTT+CGG - chr5_3:17008323-17008342 Msa0802560:intron 35.0%
TGAAGAAATTGGTGAAGGAA+GGG - chr5_3:17008394-17008413 Msa0802560:intron 35.0%
GTGAAAATGAAAGACAATCG+TGG - chr5_3:17008429-17008448 Msa0802560:intron 35.0%
! AAAGTGTTTGGTAGAGAAGA+AGG - chr5_3:17008503-17008522 Msa0802560:intron 35.0%
AAGTGTTTGGTAGAGAAGAA+GGG - chr5_3:17008504-17008523 Msa0802560:intron 35.0%
AACAGGAATTTCACCATCAT+TGG + chr5_3:17008568-17008587 None:intergenic 35.0%
TTAGAAGCAAAACACCATTG+TGG + chr5_3:17008677-17008696 None:intergenic 35.0%
GATATGTTGTCAATTAGGTG+TGG - chr5_3:17008795-17008814 Msa0802560:intron 35.0%
AGTTTCAGATTCGGATTTGT+GGG + chr5_3:17008860-17008879 None:intergenic 35.0%
! GAATCTGAAACTGAATCAGA+TGG - chr5_3:17008868-17008887 Msa0802560:intron 35.0%
! ATCCATATCTATTGCCACTT+GGG + chr5_3:17008936-17008955 None:intergenic 35.0%
AATCCATATCTATTGCCACT+TGG + chr5_3:17008937-17008956 None:intergenic 35.0%
AATATACCCAATCTGTCCAT+AGG + chr5_3:17009060-17009079 None:intergenic 35.0%
CAACTCAAAACATCTTTCAC+AGG - chr5_3:17009219-17009238 Msa0802560:intron 35.0%
CAAAACATCTTTCACAGGTA+CGG - chr5_3:17009224-17009243 Msa0802560:intron 35.0%
AAGACAAGACATTGTCTTTG+TGG - chr5_3:17009426-17009445 Msa0802560:intron 35.0%
GAAGACAAATGTTTCTTGCA+GGG + chr5_3:17009452-17009471 None:intergenic 35.0%
AGAAGACAAATGTTTCTTGC+AGG + chr5_3:17009453-17009472 None:intergenic 35.0%
CTTTGCATGTTATGCTAATC+TGG - chr5_3:17009529-17009548 Msa0802560:intron 35.0%
CATGTTATGCTAATCTGGAA+CGG - chr5_3:17009534-17009553 Msa0802560:intron 35.0%
! ACTCTCTTTCTTCTTTAGGA+AGG - chr5_3:17009659-17009678 Msa0802560:intron 35.0%
! TCTTCTTTAGGAAGGATCTT+TGG - chr5_3:17009667-17009686 Msa0802560:intron 35.0%
AATTTCGCAAGTACATCTCT+TGG - chr5_3:17009711-17009730 Msa0802560:intron 35.0%
ATTTCGCAAGTACATCTCTT+GGG - chr5_3:17009712-17009731 Msa0802560:intron 35.0%
! TAGGTAGTTTTCGATTCTCA+TGG - chr5_3:17009735-17009754 Msa0802560:intron 35.0%
TGTTTCCACTCTCATATTTG+TGG + chr5_3:17009772-17009791 None:intergenic 35.0%
AGAGTGGAAACATACTATGT+TGG - chr5_3:17009780-17009799 Msa0802560:intron 35.0%
! GAAACATACTATGTTGGTCT+TGG - chr5_3:17009786-17009805 Msa0802560:intron 35.0%
TAACTTCCAGCTGATACATA+AGG + chr5_3:17010047-17010066 None:intergenic 35.0%
!! GTGTTTGTTATAAGCCAATG+GGG - chr5_3:17010229-17010248 Msa0802560:intron 35.0%
!! CAAATTGGATTTGCTGAAGT+CGG + chr5_3:17010459-17010478 None:intergenic 35.0%
TCATCATAGAATTGGAGAGA+CGG + chr5_3:17010633-17010652 None:intergenic 35.0%
TTGAGTTCATAGATGCAATG+AGG - chr5_3:17010810-17010829 Msa0802560:intron 35.0%
! GTTGGAAGACTTCTTTTCTA+CGG + chr5_3:17010907-17010926 None:intergenic 35.0%
TAAAACTGTAAATGGACGGA+AGG - chr5_3:17010937-17010956 Msa0802560:intron 35.0%
!!! TTTTTGGCTTCCTTACACTT+GGG + chr5_3:17011271-17011290 None:intergenic 35.0%
!!! ATTTTTGGCTTCCTTACACT+TGG + chr5_3:17011272-17011291 None:intergenic 35.0%
TAGTGAAAGTAGGGGAAAAA+TGG - chr5_3:17011341-17011360 Msa0802560:CDS 35.0%
AGTGAAAGTAGGGGAAAAAT+GGG - chr5_3:17011342-17011361 Msa0802560:CDS 35.0%
! GTTAGTGGATGCCTATAAAT+AGG - chr5_3:17011508-17011527 Msa0802560:intron 35.0%
GTACATCAAGGCCTATTTAT+AGG + chr5_3:17011522-17011541 None:intergenic 35.0%
! ATTTTCTCGAGAAAATGCAG+CGG + chr5_3:17011695-17011714 None:intergenic 35.0%
GTAACAGAGTCAAGAAAGAA+AGG + chr5_3:17011774-17011793 None:intergenic 35.0%
!! AAGTACTGGACAAAGATCAT+AGG + chr5_3:17011826-17011845 None:intergenic 35.0%
ATGACAAACTCAATCACGAA+AGG + chr5_3:17011966-17011985 None:intergenic 35.0%
!!! TGTCATTTTCCCCAAATCTT+AGG - chr5_3:17012046-17012065 Msa0802560:intron 35.0%
!! GTCATTTTCCCCAAATCTTA+GGG - chr5_3:17012047-17012066 Msa0802560:intron 35.0%
GGATTAAACGCAAAAACAAG+AGG + chr5_3:17012094-17012113 None:intergenic 35.0%
!! TAGTTCAGAAGCTGTTTTGT+TGG - chr5_3:17012455-17012474 Msa0802560:intron 35.0%
!! CTTTTCCACTTTGAGTTTGA+AGG - chr5_3:17012662-17012681 Msa0802560:intron 35.0%
! TTTCCACTTTGAGTTTGAAG+GGG - chr5_3:17012664-17012683 Msa0802560:intron 35.0%
AATGGCAAGCAATAAAGTCT+TGG - chr5_3:17012895-17012914 Msa0802560:intron 35.0%
TCTTTGTTACCAATTAGAGC+TGG - chr5_3:17012956-17012975 Msa0802560:intron 35.0%
GTAATGAATCATAACGATCC+AGG + chr5_3:17013078-17013097 None:intergenic 35.0%
TCTCATAGTACCATAAGCAA+AGG + chr5_3:17013147-17013166 None:intergenic 35.0%
CCATCAAAACAGAATAGAGT+AGG + chr5_3:17013173-17013192 None:intergenic 35.0%
!! CCTACTCTATTCTGTTTTGA+TGG - chr5_3:17013170-17013189 Msa0802560:CDS 35.0%
!!! GTTTTGTTATTAGCCTATGC+TGG - chr5_3:17013213-17013232 Msa0802560:CDS 35.0%
TGATAAGCTTCTGTCATGAA+TGG - chr5_3:17013281-17013300 Msa0802560:intron 35.0%
CTTCTTGTAGCTTCTGTTAA+TGG - chr5_3:17013350-17013369 Msa0802560:CDS 35.0%
TATCAACGCTTAACCATCAA+TGG + chr5_3:17013397-17013416 None:intergenic 35.0%
CTTTGAGTATAGTTTCTGCT+TGG - chr5_3:17013492-17013511 Msa0802560:CDS 35.0%
! GTAGTTAAGCTTTTGCCTTA+TGG - chr5_3:17013514-17013533 Msa0802560:CDS 35.0%
AGTAACTAACCAAAGCCATA+AGG + chr5_3:17013667-17013686 None:intergenic 35.0%
GCTTGAGATCAAATATTGGT+TGG - chr5_3:17013687-17013706 Msa0802560:CDS 35.0%
ATGAATAACCAATCCAGAAC+CGG + chr5_3:17013828-17013847 None:intergenic 35.0%
! GATTGGTTATTCATACTTGC+TGG - chr5_3:17013834-17013853 Msa0802560:intron 35.0%
TGATTGGAAGTCTTCTCTTA+TGG - chr5_3:17013981-17014000 Msa0802560:intron 35.0%
ACAAAGTTAACACCAAACAG+AGG + chr5_3:17014085-17014104 None:intergenic 35.0%
TTCTCTTACCTTGAGTTTGA+GGG - chr5_3:17014126-17014145 Msa0802560:intron 35.0%
! GTTAGTGGATGCCTATAAAT+AGG - chr5_3:17011508-17011527 Msa0802560:intron 35.0%
GTACATCAAGGCCTATTTAT+AGG + chr5_3:17011522-17011541 None:intergenic 35.0%
AACAGAAACAATCAAGACAG+TGG - chr5_3:17014342-17014361 Msa0802560:intron 35.0%
! TGTTTTGTCCTTCAAGAAGA+GGG + chr5_3:17014373-17014392 None:intergenic 35.0%
! ATGTTTTGTCCTTCAAGAAG+AGG + chr5_3:17014374-17014393 None:intergenic 35.0%
AGGGCAAAAAGTAACTTAAG+CGG + chr5_3:17014513-17014532 None:intergenic 35.0%
! CAGAGAAGAAAAGCATAATC+AGG + chr5_3:17014533-17014552 None:intergenic 35.0%
! GATTATGCTTTTCTTCTCTG+TGG - chr5_3:17014533-17014552 Msa0802560:intron 35.0%
!! TTCACTTGCTATGCTCTTAA+AGG - chr5_3:17014581-17014600 Msa0802560:intron 35.0%
!! TCACTTGCTATGCTCTTAAA+GGG - chr5_3:17014582-17014601 Msa0802560:intron 35.0%
! TATGTCATTTGCCAGTATTC+CGG - chr5_3:17014629-17014648 Msa0802560:intron 35.0%
! CCCGTCATAATCTCATTTTC+TGG + chr5_3:17007348-17007367 None:intergenic 40.0%
GTAGGCATCCTATCTTTGAA+AGG - chr5_3:17007367-17007386 Msa0802560:CDS 40.0%
! AGGCATCCTATCTTTGAAAG+GGG - chr5_3:17007369-17007388 Msa0802560:CDS 40.0%
GTGTGGGACTATGATTCTTT+CGG + chr5_3:17007502-17007521 None:intergenic 40.0%
!! TCTGGTTTGGTCTTCTTGTA+GGG + chr5_3:17007537-17007556 None:intergenic 40.0%
! AAAGGAGTGTATCTCTGGTT+TGG + chr5_3:17007550-17007569 None:intergenic 40.0%
! TAGCTAAAGGAGTGTATCTC+TGG + chr5_3:17007555-17007574 None:intergenic 40.0%
AAGAGGCAAAGTTGTTAAGG+TGG + chr5_3:17007649-17007668 None:intergenic 40.0%
ACAACTTTGCCTCTTTAGCT+AGG - chr5_3:17007654-17007673 Msa0802560:intron 40.0%
TGTTTGTAAGACTCGGAAGA+TGG + chr5_3:17007781-17007800 None:intergenic 40.0%
TTGAACCCAAGTGATCTTCT+AGG - chr5_3:17007809-17007828 Msa0802560:intron 40.0%
ATGTGCCTAGAAGATCACTT+GGG + chr5_3:17007817-17007836 None:intergenic 40.0%
AATGTGCCTAGAAGATCACT+TGG + chr5_3:17007818-17007837 None:intergenic 40.0%
AGTGATCTTCTAGGCACATT+TGG - chr5_3:17007818-17007837 Msa0802560:intron 40.0%
! AAGCATTTTTCCATGGGTGA+GGG + chr5_3:17007845-17007864 None:intergenic 40.0%
! TAAGCATTTTTCCATGGGTG+AGG + chr5_3:17007846-17007865 None:intergenic 40.0%
TATAAAAGATGGGTACGGTG+TGG + chr5_3:17008026-17008045 None:intergenic 40.0%
CTCCATAGGTTTATTGAGAG+CGG - chr5_3:17008255-17008274 Msa0802560:intron 40.0%
TACCGCTCTCAATAAACCTA+TGG + chr5_3:17008260-17008279 None:intergenic 40.0%
GGTTTATTGAGAGCGGTAAT+TGG - chr5_3:17008262-17008281 Msa0802560:intron 40.0%
! ATGTTTTCCACGTCTTCTTC+GGG - chr5_3:17008324-17008343 Msa0802560:intron 40.0%
GTGAAGAAATTGGTGAAGGA+AGG - chr5_3:17008393-17008412 Msa0802560:intron 40.0%
CATTTCTTTGTGTCCCTTAG+CGG + chr5_3:17008601-17008620 None:intergenic 40.0%
! TCTTTTTCCTAGAACTCGGT+TGG - chr5_3:17008629-17008648 Msa0802560:intron 40.0%
ATTTCTTCCAACCGAGTTCT+AGG + chr5_3:17008639-17008658 None:intergenic 40.0%
CAGTTTCAGATTCGGATTTG+TGG + chr5_3:17008861-17008880 None:intergenic 40.0%
ATGCGTGCCAATGCATATAA+GGG + chr5_3:17008901-17008920 None:intergenic 40.0%
TTCCCAAGTGGCAATAGATA+TGG - chr5_3:17008931-17008950 Msa0802560:intron 40.0%
AGTGTTTCCTATGGACAGAT+TGG - chr5_3:17009050-17009069 Msa0802560:intron 40.0%
GTGTTTCCTATGGACAGATT+GGG - chr5_3:17009051-17009070 Msa0802560:intron 40.0%
! CTTTAGGAAGGATCTTTGGA+TGG - chr5_3:17009671-17009690 Msa0802560:intron 40.0%
CACTCTCATATTTGTGGATG+TGG + chr5_3:17009766-17009785 None:intergenic 40.0%
CACATCCACAAATATGAGAG+TGG - chr5_3:17009764-17009783 Msa0802560:intron 40.0%
GTAAAGACGCGTGATATGAT+AGG + chr5_3:17010158-17010177 None:intergenic 40.0%
AGTGGCCATCTAATCATGAT+CGG - chr5_3:17010308-17010327 Msa0802560:intron 40.0%
AGTGTCCAATCAAGATCAGA+TGG - chr5_3:17010393-17010412 Msa0802560:intron 40.0%
GGTAACCATCTGATCTTGAT+TGG + chr5_3:17010401-17010420 None:intergenic 40.0%
CGACTTCAGCAAATCCAATT+TGG - chr5_3:17010457-17010476 Msa0802560:intron 40.0%
GGTAATGACAAGCACCAAAT+TGG + chr5_3:17010474-17010493 None:intergenic 40.0%
GACTCATAAGTTGCACTAAC+CGG - chr5_3:17010536-17010555 Msa0802560:intron 40.0%
TAAGGAATCTGAACTGAGAG+AGG - chr5_3:17010742-17010761 Msa0802560:intron 40.0%
AAGCTAACCCTGACCTATTA+TGG - chr5_3:17010834-17010853 Msa0802560:intron 40.0%
AGCTAACCCTGACCTATTAT+GGG - chr5_3:17010835-17010854 Msa0802560:intron 40.0%
CAATAGCCCATAATAGGTCA+GGG + chr5_3:17010844-17010863 None:intergenic 40.0%
TCAATAGCCCATAATAGGTC+AGG + chr5_3:17010845-17010864 None:intergenic 40.0%
TGATAATACCCTCTTGCATC+TGG - chr5_3:17010988-17011007 Msa0802560:intron 40.0%
TTGCATCTGGCTGGAAATTT+AGG - chr5_3:17011001-17011020 Msa0802560:CDS 40.0%
TGCATCTGGCTGGAAATTTA+GGG - chr5_3:17011002-17011021 Msa0802560:CDS 40.0%
! TAGCATAATGGGATGAATGC+AGG - chr5_3:17011225-17011244 Msa0802560:CDS 40.0%
AATTGTTCACCCCAAGTGTA+AGG - chr5_3:17011258-17011277 Msa0802560:CDS 40.0%
!!! TTTTGGCTTCCTTACACTTG+GGG + chr5_3:17011270-17011289 None:intergenic 40.0%
CTTTCGGTAAATATCTCACG+AGG + chr5_3:17011310-17011329 None:intergenic 40.0%
GATATTTACCGAAAGCCACA+AGG - chr5_3:17011315-17011334 Msa0802560:CDS 40.0%
ACAAGGAGCTAGTGAAAGTA+GGG - chr5_3:17011332-17011351 Msa0802560:CDS 40.0%
AAATGGGCAAAAGATACAGC+TGG - chr5_3:17011358-17011377 Msa0802560:CDS 40.0%
! CTTTTCTCTCCTTTCATCCA+TGG - chr5_3:17011606-17011625 Msa0802560:intron 40.0%
GTTAGTAAACATGGCATCCA+TGG + chr5_3:17011626-17011645 None:intergenic 40.0%
GGATGCCATGTTTACTAACA+TGG - chr5_3:17011627-17011646 Msa0802560:intron 40.0%
! TGGTATCAGAGCATCAAATC+TGG - chr5_3:17011647-17011666 Msa0802560:intron 40.0%
AAATCTGGTATCCACCTTGA+AGG - chr5_3:17011662-17011681 Msa0802560:intron 40.0%
!! CACAAACTGATTCGAAGTAC+TGG + chr5_3:17011840-17011859 None:intergenic 40.0%
TCACGAAAGGATTCAGAAAC+TGG + chr5_3:17011953-17011972 None:intergenic 40.0%
TCTCGAAACCCTAAGATTTG+GGG + chr5_3:17012058-17012077 None:intergenic 40.0%
CTCTCGAAACCCTAAGATTT+GGG + chr5_3:17012059-17012078 None:intergenic 40.0%
ACTCTCGAAACCCTAAGATT+TGG + chr5_3:17012060-17012079 None:intergenic 40.0%
CTTGTTCATCGCATCTGATT+CGG - chr5_3:17012247-17012266 Msa0802560:intron 40.0%
! CATGAAGCTTCAATTGACTC+AGG - chr5_3:17012303-17012322 Msa0802560:intron 40.0%
!! CGTTTCAGAAGCTGTTTTGT+TGG - chr5_3:17012395-17012414 Msa0802560:intron 40.0%
!! TGGTTCAGAAGCTGTTTTGT+TGG - chr5_3:17012415-17012434 Msa0802560:intron 40.0%
!! TGGTTCAGAAGCTGTTTTGT+TGG - chr5_3:17012415-17012434 Msa0802560:intron 40.0%
! TTCCACTTTGAGTTTGAAGG+GGG - chr5_3:17012665-17012684 Msa0802560:intron 40.0%
ACCTTTACTGAACCACAACT+TGG + chr5_3:17012721-17012740 None:intergenic 40.0%
!! GTTTCTACAGAAGCGTGTTT+TGG - chr5_3:17012739-17012758 Msa0802560:intron 40.0%
!!! TACAGAAGCGTGTTTTGGTT+TGG - chr5_3:17012744-17012763 Msa0802560:intron 40.0%
! AGGATGGACTTTGTGAAGAT+TGG - chr5_3:17012801-17012820 Msa0802560:intron 40.0%
! CACTTGTAACCAGCTCTAAT+TGG + chr5_3:17012968-17012987 None:intergenic 40.0%
!! CAAGTTTAGCTCTCATGCTT+TGG - chr5_3:17013003-17013022 Msa0802560:intron 40.0%
!! TTTAGCTCTCATGCTTTGGT+TGG - chr5_3:17013007-17013026 Msa0802560:intron 40.0%
GCTTTGGTTGGATTCTTTAC+TGG - chr5_3:17013019-17013038 Msa0802560:intron 40.0%
TACCTCTTTCTATTTGGTCC+TGG - chr5_3:17013057-17013076 Msa0802560:intron 40.0%
ATCCAGGACCAAATAGAAAG+AGG + chr5_3:17013062-17013081 None:intergenic 40.0%
TACCTCTTTCTATTTGGTCC+TGG - chr5_3:17013057-17013076 Msa0802560:intron 40.0%
ATCCAGGACCAAATAGAAAG+AGG + chr5_3:17013062-17013081 None:intergenic 40.0%
AAAAGCAGCTATAACGATCC+AGG + chr5_3:17013116-17013135 None:intergenic 40.0%
!! TGGATCGTTATAGCTGCTTT+TGG - chr5_3:17013115-17013134 Msa0802560:CDS 40.0%
!!! ATTCTGTTTTGATGGGATGC+AGG - chr5_3:17013178-17013197 Msa0802560:CDS 40.0%
!!! TTCTGTTTTGATGGGATGCA+GGG - chr5_3:17013179-17013198 Msa0802560:CDS 40.0%
ACAAGAATCAAAGCCAGCAT+AGG + chr5_3:17013229-17013248 None:intergenic 40.0%
GTTTGTGCTTCTGTTCATGA+TGG - chr5_3:17013247-17013266 Msa0802560:intron 40.0%
TGATTGCTTCTGCCTTTGAT+AGG - chr5_3:17013430-17013449 Msa0802560:CDS 40.0%
CAAGCTTAACCACCTATCAA+AGG + chr5_3:17013445-17013464 None:intergenic 40.0%
GCTATGATCATCAAGCCATA+AGG + chr5_3:17013532-17013551 None:intergenic 40.0%
CAACATGCTTAACCACCATA+GGG + chr5_3:17013560-17013579 None:intergenic 40.0%
TTAAGCATGTTGCCCTTTGT+TGG - chr5_3:17013568-17013587 Msa0802560:CDS 40.0%
CCATCAACAAAGCCAACAAA+GGG + chr5_3:17013583-17013602 None:intergenic 40.0%
ACCATCAACAAAGCCAACAA+AGG + chr5_3:17013584-17013603 None:intergenic 40.0%
TGATGGTAGCTTCTGTTAAG+TGG - chr5_3:17013597-17013616 Msa0802560:CDS 40.0%
AGTGGTTAAGCCTAGAGTTA+TGG - chr5_3:17013615-17013634 Msa0802560:CDS 40.0%
! TGGTTAAGCGTTTTGCCTTA+TGG - chr5_3:17013649-17013668 Msa0802560:CDS 40.0%
!! TGGTTGGATTTGGTTTGGTT+TGG - chr5_3:17013703-17013722 Msa0802560:CDS 40.0%
TGAATAACCAATCCAGAACC+GGG + chr5_3:17013827-17013846 None:intergenic 40.0%
!!! GAGCTGTTTTGGTTAGTAGT+TGG - chr5_3:17013913-17013932 Msa0802560:intron 40.0%
! TTGCAAGATGTTTCTGTTGG+AGG - chr5_3:17013946-17013965 Msa0802560:intron 40.0%
TTTCTGTTGGAGGAAACAAG+TGG - chr5_3:17013956-17013975 Msa0802560:intron 40.0%
GAGGAAACAAGTGGTTTGAT+TGG - chr5_3:17013965-17013984 Msa0802560:intron 40.0%
! GAGAACTCTTAGCTTGAGTT+TGG + chr5_3:17014111-17014130 None:intergenic 40.0%
GTTCTCTTACCTTGAGTTTG+AGG - chr5_3:17014125-17014144 Msa0802560:intron 40.0%
! CTTTTCTCTCCTTTCATCCA+TGG - chr5_3:17011606-17011625 Msa0802560:intron 40.0%
GTTAGTAAACATGGCATCCA+TGG + chr5_3:17011626-17011645 None:intergenic 40.0%
! GTTTTGTCCTTCAAGAAGAG+GGG + chr5_3:17014372-17014391 None:intergenic 40.0%
ACTTCAGTCCTGCTATTCAT+TGG - chr5_3:17014441-17014460 Msa0802560:intron 40.0%
ATGCTCTTAAAGGGACATCA+AGG - chr5_3:17014591-17014610 Msa0802560:intron 40.0%
AAGAACAATCACCGGAATAC+TGG + chr5_3:17014643-17014662 None:intergenic 40.0%
! GAAGGTACAAGAACAATCAC+CGG + chr5_3:17014651-17014670 None:intergenic 40.0%
CTTCGTCCCCTTTCAAAGAT+AGG + chr5_3:17007378-17007397 None:intergenic 45.0%
TCTTGTAGGGGTGGATCATT+GGG + chr5_3:17007524-17007543 None:intergenic 45.0%
TTCTTGTAGGGGTGGATCAT+TGG + chr5_3:17007525-17007544 None:intergenic 45.0%
!! CTGGTTTGGTCTTCTTGTAG+GGG + chr5_3:17007536-17007555 None:intergenic 45.0%
!! CTCTGGTTTGGTCTTCTTGT+AGG + chr5_3:17007538-17007557 None:intergenic 45.0%
AAGACGGGTCTCTTCGTTTA+GGG + chr5_3:17007594-17007613 None:intergenic 45.0%
TAGGATCTTGGTTGGAAGAC+GGG + chr5_3:17007609-17007628 None:intergenic 45.0%
GTAGGATCTTGGTTGGAAGA+CGG + chr5_3:17007610-17007629 None:intergenic 45.0%
GGTGGGATCAGTTATGATGT+AGG + chr5_3:17007628-17007647 None:intergenic 45.0%
GGCAAAGTTGTTAAGGTGGT+GGG + chr5_3:17007645-17007664 None:intergenic 45.0%
AGGCAAAGTTGTTAAGGTGG+TGG + chr5_3:17007646-17007665 None:intergenic 45.0%
ACTTAGAGGTCTTGGGTAAG+TGG + chr5_3:17007727-17007746 None:intergenic 45.0%
CTTCATGTTGCAGTGATTGC+TGG - chr5_3:17008357-17008376 Msa0802560:intron 45.0%
TGGTGAAGGAAGGGAAAGAT+AGG - chr5_3:17008403-17008422 Msa0802560:intron 45.0%
CAACTCAGCAACAAGAGCTA+GGG + chr5_3:17008463-17008482 None:intergenic 45.0%
TCAACTCAGCAACAAGAGCT+AGG + chr5_3:17008464-17008483 None:intergenic 45.0%
TGTTTGGTAGAGAAGAAGGG+AGG - chr5_3:17008507-17008526 Msa0802560:intron 45.0%
GTTTGGTAGAGAAGAAGGGA+GGG - chr5_3:17008508-17008527 Msa0802560:intron 45.0%
CGTGCAACCCTTATATGCAT+TGG - chr5_3:17008891-17008910 Msa0802560:intron 45.0%
CATGCGTGCCAATGCATATA+AGG + chr5_3:17008902-17008921 None:intergenic 45.0%
AAACCTTCTCATGCACAGTG+CGG - chr5_3:17010179-17010198 Msa0802560:intron 45.0%
TGTTATAAGCCAATGGGGTG+TGG - chr5_3:17010234-17010253 Msa0802560:intron 45.0%
TCTCTACTGTCACACGTTAG+TGG - chr5_3:17010290-17010309 Msa0802560:intron 45.0%
GCCATCTAATCATGATCGGA+CGG - chr5_3:17010312-17010331 Msa0802560:intron 45.0%
ACCGTCCGATCATGATTAGA+TGG + chr5_3:17010316-17010335 None:intergenic 45.0%
! GGACGGTCCAAATTCAAGTT+TGG - chr5_3:17010329-17010348 Msa0802560:intron 45.0%
ACAATCACTCAGTCTGACGA+AGG + chr5_3:17010422-17010441 None:intergenic 45.0%
ATGTTGCAAGCAGCTAAGCA+TGG - chr5_3:17010782-17010801 Msa0802560:intron 45.0%
ATTTCCAGCCAGATGCAAGA+GGG + chr5_3:17010999-17011018 None:intergenic 45.0%
AATTTCCAGCCAGATGCAAG+AGG + chr5_3:17011000-17011019 None:intergenic 45.0%
AGATCTTCGGTGAAGATCAG+AGG + chr5_3:17011032-17011051 None:intergenic 45.0%
TCTGATCTTCACCGAAGATC+TGG - chr5_3:17011031-17011050 Msa0802560:CDS 45.0%
TCTCTTTGCATTTGGAGAGC+AGG + chr5_3:17011058-17011077 None:intergenic 45.0%
CTACTTTCACTAGCTCCTTG+TGG + chr5_3:17011333-17011352 None:intergenic 45.0%
CACAAGGAGCTAGTGAAAGT+AGG - chr5_3:17011331-17011350 Msa0802560:CDS 45.0%
CAAGGAGCTAGTGAAAGTAG+GGG - chr5_3:17011333-17011352 Msa0802560:CDS 45.0%
ACATGGCATCCATGGATGAA+AGG + chr5_3:17011618-17011637 None:intergenic 45.0%
GCGGAAAATATCCTTCAAGG+TGG + chr5_3:17011676-17011695 None:intergenic 45.0%
GCAGCGGAAAATATCCTTCA+AGG + chr5_3:17011679-17011698 None:intergenic 45.0%
!! CGCATCTGATTCGGTTCATA+TGG - chr5_3:17012256-17012275 Msa0802560:intron 45.0%
ACTCTGTATGTGCCAAGTTG+TGG - chr5_3:17012706-17012725 Msa0802560:intron 45.0%
GCCAAGTTGTGGTTCAGTAA+AGG - chr5_3:17012717-17012736 Msa0802560:intron 45.0%
!! TTTGGTTTGGTGCAACACGT+AGG - chr5_3:17012757-17012776 Msa0802560:intron 45.0%
!! AAGAACTTTGGTTCTGCGTG+TGG - chr5_3:17012840-17012859 Msa0802560:CDS 45.0%
TTCTGCGTGTGGAGATATGT+TGG - chr5_3:17012851-17012870 Msa0802560:CDS 45.0%
AGTACCATAAGCAAAGGCTG+AGG + chr5_3:17013141-17013160 None:intergenic 45.0%
AAACGACGCTTAACCATCCT+CGG + chr5_3:17013326-17013345 None:intergenic 45.0%
CGTGACACTTCTTCCATTGA+TGG - chr5_3:17013381-17013400 Msa0802560:CDS 45.0%
TTGCTTCTGCCTTTGATAGG+TGG - chr5_3:17013433-17013452 Msa0802560:CDS 45.0%
GTTGTTGTGCTTCTGTCAAG+TGG - chr5_3:17013464-17013483 Msa0802560:CDS 45.0%
TGATCATAGCTTCTGCCCTA+TGG - chr5_3:17013542-17013561 Msa0802560:CDS 45.0%
GCAACATGCTTAACCACCAT+AGG + chr5_3:17013561-17013580 None:intergenic 45.0%
!! CCCTTTGTTGGCTTTGTTGA+TGG - chr5_3:17013580-17013599 Msa0802560:CDS 45.0%
TGAGCAGAAGCCATAACTCT+AGG + chr5_3:17013628-17013647 None:intergenic 45.0%
GAGTTATGGCTTCTGCTCAA+TGG - chr5_3:17013629-17013648 Msa0802560:CDS 45.0%
! AGCGTTTTGCCTTATGGCTT+TGG - chr5_3:17013655-17013674 Msa0802560:CDS 45.0%
!! GTTGGTTCTGCTAGTGATGT+TGG - chr5_3:17013752-17013771 Msa0802560:CDS 45.0%
! GTTTTCCTTGCCTACACCTT+TGG - chr5_3:17013796-17013815 Msa0802560:CDS 45.0%
! CATCTGCTAGAGAGCTGTTT+TGG - chr5_3:17013902-17013921 Msa0802560:intron 45.0%
TCTTACCTTGAGTTTGAGGG+AGG - chr5_3:17014129-17014148 Msa0802560:intron 45.0%
AATAGCCTCCCTCAAACTCA+AGG + chr5_3:17014137-17014156 None:intergenic 45.0%
ACATGGCATCCATGGATGAA+AGG + chr5_3:17011618-17011637 None:intergenic 45.0%
TGGAATTCCCCTCTTCTTGA+AGG - chr5_3:17014362-17014381 Msa0802560:intron 45.0%
ACTTAAGCGGCAGAGACTTT+AGG + chr5_3:17014500-17014519 None:intergenic 45.0%
AGCACAGAAAGCAACCATCA+TGG + chr5_3:17014562-17014581 None:intergenic 45.0%
ATGAAGAGTCGCAACTGTGA+AGG + chr5_3:17014669-17014688 None:intergenic 45.0%
!!! ATTAAATGAAAAATATATTT+TGG + chr5_3:17008148-17008167 None:intergenic 5.0%
!! TCAATTATATAAATTTAATA+AGG + chr5_3:17009258-17009277 None:intergenic 5.0%
!! ATATATATATATATATATGA+CGG + chr5_3:17009827-17009846 None:intergenic 5.0%
! GTTTGGTCTTCTTGTAGGGG+TGG + chr5_3:17007533-17007552 None:intergenic 50.0%
GAAGACGGGTCTCTTCGTTT+AGG + chr5_3:17007595-17007614 None:intergenic 50.0%
GAAGATGGAGTCTAGGAGTG+AGG + chr5_3:17007766-17007785 None:intergenic 50.0%
AGACTCGGAAGATGGAGTCT+AGG + chr5_3:17007773-17007792 None:intergenic 50.0%
TTTCCACGTCTTCTTCGGGA+AGG - chr5_3:17008328-17008347 Msa0802560:intron 50.0%
! GCTCTTGTTGCTGAGTTGAC+TGG - chr5_3:17008465-17008484 Msa0802560:intron 50.0%
TTAGCGGCTGCAAGAAGAAC+AGG + chr5_3:17008585-17008604 None:intergenic 50.0%
TGTTCTTCTTGCAGCCGCTA+AGG - chr5_3:17008584-17008603 Msa0802560:intron 50.0%
GTTCTTCTTGCAGCCGCTAA+GGG - chr5_3:17008585-17008604 Msa0802560:intron 50.0%
TTGTGGGCAAGTGGCAATTG+CGG + chr5_3:17008844-17008863 None:intergenic 50.0%
GATTCGGATTTGTGGGCAAG+TGG + chr5_3:17008853-17008872 None:intergenic 50.0%
ATGCCTTCTGTGTTCCCAAG+TGG - chr5_3:17008919-17008938 Msa0802560:intron 50.0%
! TTGCCACTTGGGAACACAGA+AGG + chr5_3:17008925-17008944 None:intergenic 50.0%
CGCAAGTACATCTCTTGGGT+AGG - chr5_3:17009716-17009735 Msa0802560:intron 50.0%
ATTCCGCACTGTGCATGAGA+AGG + chr5_3:17010185-17010204 None:intergenic 50.0%
AATACCCTCTTGCATCTGGC+TGG - chr5_3:17010992-17011011 Msa0802560:intron 50.0%
CTTCGGTGAAGATCAGAGGA+AGG + chr5_3:17011028-17011047 None:intergenic 50.0%
AATGGGATGAATGCAGGCTG+TGG - chr5_3:17011231-17011250 Msa0802560:CDS 50.0%
CACTAGCTCCTTGTGGCTTT+CGG + chr5_3:17011326-17011345 None:intergenic 50.0%
GAAAGCTGCAGCGAACATGA+TGG + chr5_3:17011416-17011435 None:intergenic 50.0%
GTCCCCCTTCAAACTCAAAG+TGG + chr5_3:17012670-17012689 None:intergenic 50.0%
TTGGCCTCAGCCTTTGCTTA+TGG - chr5_3:17013134-17013153 Msa0802560:CDS 50.0%
TCATAGCTTCTGCCCTATGG+TGG - chr5_3:17013545-17013564 Msa0802560:CDS 50.0%
! AGGTACCAAAGGTGTAGGCA+AGG + chr5_3:17013804-17013823 None:intergenic 50.0%
ATAACCAATCCAGAACCGGG+AGG + chr5_3:17013824-17013843 None:intergenic 50.0%
AACGGCGCGTTATGCAGAAA+AGG - chr5_3:17014470-17014489 Msa0802560:intron 50.0%
CTTCTCTGTGGTGTCCATGA+TGG - chr5_3:17014545-17014564 Msa0802560:intron 50.0%
AGGGGTGGATCATTGGGTGT+GGG + chr5_3:17007518-17007537 None:intergenic 55.0%
TAGGGGTGGATCATTGGGTG+TGG + chr5_3:17007519-17007538 None:intergenic 55.0%
!!! GCGTTGGAGGCTGGTTTTAG+AGG + chr5_3:17007705-17007724 None:intergenic 55.0%
! TCTTGGGTAAGTGGCGTTGG+AGG + chr5_3:17007718-17007737 None:intergenic 55.0%
AGGTCTTGGGTAAGTGGCGT+TGG + chr5_3:17007721-17007740 None:intergenic 55.0%
CACATTTGGACCCTCACCCA+TGG - chr5_3:17007832-17007851 Msa0802560:intron 55.0%
AGTCCTTCCCGAAGAAGACG+TGG + chr5_3:17008334-17008353 None:intergenic 55.0%
AAGAAGGGAGGGCAGGTAGT+TGG - chr5_3:17008519-17008538 Msa0802560:intron 55.0%
GTGGCAATTGCGGGAATCGT+TGG + chr5_3:17008834-17008853 None:intergenic 55.0%
TGTGGGCAAGTGGCAATTGC+GGG + chr5_3:17008843-17008862 None:intergenic 55.0%
TCCTGACAACCACACCCCAT+TGG + chr5_3:17010246-17010265 None:intergenic 55.0%
GGGGTGTGGTTGTCAGGAAT+CGG - chr5_3:17010248-17010267 Msa0802560:intron 55.0%
GGAGAGCAGGACCAGATCTT+CGG + chr5_3:17011045-17011064 None:intergenic 55.0%
! AAGCGTTGTGCTTCTGTCCG+AGG - chr5_3:17013306-17013325 Msa0802560:intron 55.0%
GTTGTGCTTCTGTCCGAGGA+TGG - chr5_3:17013310-17013329 Msa0802560:intron 55.0%
CCTACACCTTTGGTACCTCC+CGG - chr5_3:17013806-17013825 Msa0802560:CDS 55.0%
GGTAGAGAAGAAGGGAGGGC+AGG - chr5_3:17008512-17008531 Msa0802560:intron 60.0%
GCCAATGGGGTGTGGTTGTC+AGG - chr5_3:17010242-17010261 Msa0802560:intron 60.0%
GCTGCAGCTTTCACAGTCCC+TGG - chr5_3:17011424-17011443 Msa0802560:intron 60.0%
GCAGCTTTCACAGTCCCTGG+TGG - chr5_3:17011427-17011446 Msa0802560:intron 60.0%
!! CCGGGAGGTACCAAAGGTGT+AGG + chr5_3:17013809-17013828 None:intergenic 60.0%
!! CCAGAACCGGGAGGTACCAA+AGG + chr5_3:17013815-17013834 None:intergenic 60.0%
CCTTTGGTACCTCCCGGTTC+TGG - chr5_3:17013812-17013831 Msa0802560:CDS 60.0%
!! GGTACCTCCCGGTTCTGGAT+TGG - chr5_3:17013817-17013836 Msa0802560:intron 60.0%
! GGGTAAGTGGCGTTGGAGGC+TGG + chr5_3:17007714-17007733 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 17007330 17014722 17007330 ID=Msa0802560;Name=Msa0802560
chr5_3 mRNA 17007330 17014722 17007330 ID=Msa0802560-mRNA-1;Parent=Msa0802560;Name=Msa0802560-mRNA-1;_AED=0.16;_eAED=0.17;_QI=0|0.5|0.42|0.85|1|1|7|0|524
chr5_3 exon 17014686 17014722 17014686 ID=Msa0802560-mRNA-1:exon:7130;Parent=Msa0802560-mRNA-1
chr5_3 exon 17013329 17013832 17013329 ID=Msa0802560-mRNA-1:exon:7129;Parent=Msa0802560-mRNA-1
chr5_3 exon 17013073 17013240 17013073 ID=Msa0802560-mRNA-1:exon:7128;Parent=Msa0802560-mRNA-1
chr5_3 exon 17012812 17012913 17012812 ID=Msa0802560-mRNA-1:exon:7127;Parent=Msa0802560-mRNA-1
chr5_3 exon 17012053 17012112 17012053 ID=Msa0802560-mRNA-1:exon:7126;Parent=Msa0802560-mRNA-1
chr5_3 exon 17011000 17011395 17011000 ID=Msa0802560-mRNA-1:exon:7125;Parent=Msa0802560-mRNA-1
chr5_3 exon 17007330 17007637 17007330 ID=Msa0802560-mRNA-1:exon:7124;Parent=Msa0802560-mRNA-1
chr5_3 CDS 17014686 17014722 17014686 ID=Msa0802560-mRNA-1:cds;Parent=Msa0802560-mRNA-1
chr5_3 CDS 17013329 17013832 17013329 ID=Msa0802560-mRNA-1:cds;Parent=Msa0802560-mRNA-1
chr5_3 CDS 17013073 17013240 17013073 ID=Msa0802560-mRNA-1:cds;Parent=Msa0802560-mRNA-1
chr5_3 CDS 17012812 17012913 17012812 ID=Msa0802560-mRNA-1:cds;Parent=Msa0802560-mRNA-1
chr5_3 CDS 17012053 17012112 17012053 ID=Msa0802560-mRNA-1:cds;Parent=Msa0802560-mRNA-1
chr5_3 CDS 17011000 17011395 17011000 ID=Msa0802560-mRNA-1:cds;Parent=Msa0802560-mRNA-1
chr5_3 CDS 17007330 17007637 17007330 ID=Msa0802560-mRNA-1:cds;Parent=Msa0802560-mRNA-1
Gene Sequence

>Msa0802560

ATGCGGGATAATACGCCAGAAAATGAGATTATGACGGGTGTGGTAGACGATAGTCTCCTTCACTATAGATCACTCCATAGGTTTATTGAGAGCGGTAATTGGAATGATGCAAAAGCATTCATGAATAGGGATGAAACATCTATGTTTTCCACGTCTTCTTCGGGAAGGACTATTCTTCATGTTGCAGTGATTGCTGGTCACGAAAAAATTGTGAAGAAATTGGTGAAGGAAGGGAAAGATAGGTTAGTGAAAATGAAAGACAATCGTGGTTACACAGCCCTAGCTCTTGTTGCTGAGTTGACTGGAAATACCAATATAGCAAAGTGTTTGGTAGAGAAGAAGGGAGGGCAGGTAGTTGGACAAGACTTGTTATCTATGAAGACCAATGATGGTGAAATTCCTGTTCTTCTTGCAGCCGCTAAGGGACACAAAGAAATGACTAGTTATCTTTTTCCTAGAACTCGGTTGGAAGAAATGACAGATAAAAATTTCCACAATGGTGTTTTGCTTCTAACCCGATGTATCAATGCAGAAATATTTGGTGTGGCTTTGAGTTTACTCCAACGATTCCCGCAATTGCCACTTGCCCACAAATCCGAATCTGAAACTGAATCAGATGGCGTGCAACCCTTATATGCATTGGCACGCATGCCTTCTGTGTTCCCAAGTGGCAATAGATATGGATTCATACGGAGATTCCTTTACAAAATTTTGAGATTACCAGACATAAAAGTGCAAAACTTATATGGGATAACTGTGATTGTATCAATTGTTGTTCTAAAGGAAAAACAACTCAAAACATCTTTCACAGGTCGGATACTTGTACATATTCACATGTCATTTCAGGATTTAGCAATATTAAAATTGTCTGCAATAAGAGAGATATACAATCAGAAAATGACGCACCGTCTAGTGCTTGAAATATTGAATTGCTTGTACCAAAAAATTCAAGAATTTAAGGAATCTGAACTGAGAGAGGCTTCAGCGTACGATGCAATGTTGCAAGCAGCTAAGCATGGAAATATTGAGTTCATAGATGCAATGAGGAAAGCTAACCCTGACCTATTATGGGCTATTGATAAAAATAAGAGAGGTATATTTTCACACGCAATTTTGAACCGTAGAAAAGAAGTCTTCCAACTCATACATGATAAAACTGTAAATGGACGGAAGGAGATTGTTAGATGTCGTGTAGATGCATTTGATAATACCCTCTTGCATCTGGCTGGAAATTTAGGGCCTTCCTCTGATCTTCACCGAAGATCTGATGCAATATCTCTTTTCACTTCTTCAACTTCAGTCCTGCTATTCATTGGAATTCTAACGGCGCGTTATGCAGAAAAGGATTTCCTAAAGTCTCTGCCGCTTAAGTTACTTTTTGCCCTGATTATGCTTTTCTTCTCTGTGGTGTCCATGATGGTTGCTTTCTGTGCTTCACTTGCTATGCTCTTAAAGGGACATCAAGGAGTCATAATAACAGCTATGTCATTTGCCAGTATTCCGGTGATTGTTCTTGTACCTTCACAGTTGCGACTCTTCATTGAGATTTTCAAGTCTACAGTATTGTCCAAATGA

Protein sequence

>Msa0802560

MRDNTPENEIMTGVVDDSLLHYRSLHRFIESGNWNDAKAFMNRDETSMFSTSSSGRTILHVAVIAGHEKIVKKLVKEGKDRLVKMKDNRGYTALALVAELTGNTNIAKCLVEKKGGQVVGQDLLSMKTNDGEIPVLLAAAKGHKEMTSYLFPRTRLEEMTDKNFHNGVLLLTRCINAEIFGVALSLLQRFPQLPLAHKSESETESDGVQPLYALARMPSVFPSGNRYGFIRRFLYKILRLPDIKVQNLYGITVIVSIVVLKEKQLKTSFTGRILVHIHMSFQDLAILKLSAIREIYNQKMTHRLVLEILNCLYQKIQEFKESELREASAYDAMLQAAKHGNIEFIDAMRKANPDLLWAIDKNKRGIFSHAILNRRKEVFQLIHDKTVNGRKEIVRCRVDAFDNTLLHLAGNLGPSSDLHRRSDAISLFTSSTSVLLFIGILTARYAEKDFLKSLPLKLLFALIMLFFSVVSMMVAFCASLAMLLKGHQGVIITAMSFASIPVIVLVPSQLRLFIEIFKSTVLSK*