Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719980 | XP_003612801.2 | 83.302 | 539 | 27 | 5 | 1 | 534 | 1 | 481 | 0.0 | 841 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719980 | sp|P30706|PLSB_PEA | 72.846 | 534 | 68 | 6 | 1 | 534 | 1 | 457 | 0.0 | 738 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719980 | A0A396HVR0 | 83.302 | 539 | 27 | 5 | 1 | 534 | 1 | 481 | 0.0 | 841 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0719980 | Msa0802770 | 0.977376 | 1.172759e-143 | -8.615850e-47 |
Msa0719980 | Msa1423250 | 0.980838 | 3.756976e-151 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719980 | MtrunA17_Chr5g0410661 | 83.302 | 539 | 27 | 5 | 1 | 534 | 1 | 481 | 0.0 | 841 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0719980 | AT1G32200.1 | 57.113 | 471 | 137 | 5 | 64 | 533 | 52 | 458 | 0.0 | 538 |
Msa0719980 | AT1G32200.2 | 57.113 | 471 | 137 | 5 | 64 | 533 | 52 | 458 | 0.0 | 538 |
Find 139 sgRNAs with CRISPR-Local
Find 525 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGATACCTTGTTCATTTC+TGG | 0.097282 | 5_1:+15697939 | None:intergenic |
AAGGCTCTCTCTTTGCTTTA+TGG | 0.111318 | 5_1:+15696304 | None:intergenic |
TTGTTTGCAGATGTTCTTTC+TGG | 0.133137 | 5_1:-15697113 | Msa0719980:intron |
TAAAGAAATTTCTGCTAATA+TGG | 0.208936 | 5_1:-15697995 | Msa0719980:CDS |
CTAAGGGACGAATATAATTT+TGG | 0.210411 | 5_1:+15696262 | None:intergenic |
AAAATTGGTAAAATTATATT+TGG | 0.216776 | 5_1:+15690416 | None:intergenic |
TTACTATCTTCGCTCTTTCT+AGG | 0.218085 | 5_1:+15694288 | None:intergenic |
TCTTCTTCTGTAACAACTTC+TGG | 0.218853 | 5_1:-15698078 | Msa0719980:CDS |
CAGATACCAACCTTAGAATT+TGG | 0.237376 | 5_1:+15694225 | None:intergenic |
GGAGTGGATCACAAATAATT+TGG | 0.242672 | 5_1:-15692883 | Msa0719980:CDS |
GTGTCGGAAAAGCTTATTTC+TGG | 0.251355 | 5_1:+15691759 | None:intergenic |
TGGTAATGGTACATATAATA+AGG | 0.262871 | 5_1:+15694245 | None:intergenic |
TGTACCATTACCAAATTCTA+AGG | 0.312534 | 5_1:-15694235 | Msa0719980:intron |
CTGAAACAGATTACTGATAA+TGG | 0.323405 | 5_1:+15690512 | None:intergenic |
GTCGATCCCTACCACCGCTT+GGG | 0.326320 | 5_1:+15692855 | None:intergenic |
ATATTAGCAGAAATTTCTTT+AGG | 0.327144 | 5_1:+15697997 | None:intergenic |
CAATACAATCTCATCTGCTT+TGG | 0.332538 | 5_1:+15696563 | None:intergenic |
CGAAGGCTTGTCGATCATTC+AGG | 0.340682 | 5_1:-15691986 | Msa0719980:CDS |
CTCTTCCATTTGAATGAAAA+GGG | 0.362801 | 5_1:+15694432 | None:intergenic |
GCTCTTCCATTTGAATGAAA+AGG | 0.376426 | 5_1:+15694431 | None:intergenic |
TTCCATCCCTTCAGCAATAG+TGG | 0.377040 | 5_1:+15697055 | None:intergenic |
TACTATCTTCGCTCTTTCTA+GGG | 0.377332 | 5_1:+15694289 | None:intergenic |
CATAATGCCTCCTCCACTTA+AGG | 0.402090 | 5_1:-15691921 | Msa0719980:intron |
AACTGGTTATGCTTAAATAG+AGG | 0.403160 | 5_1:+15692551 | None:intergenic |
CTGGATCAGCTTCACTTTGG+TGG | 0.409775 | 5_1:+15693590 | None:intergenic |
AATACAATCTCATCTGCTTT+GGG | 0.414398 | 5_1:+15696564 | None:intergenic |
ATTTAACTCAAAATTACAAA+TGG | 0.415465 | 5_1:+15690336 | None:intergenic |
AGCAGAGGTCAAAATGCAAT+TGG | 0.416702 | 5_1:-15690237 | Msa0719980:three_prime_UTR |
ATAAAGTACATATGTTAGAT+AGG | 0.417117 | 5_1:-15692592 | Msa0719980:CDS |
TCCACATATTGCTGAGAACT+TGG | 0.418931 | 5_1:-15693536 | Msa0719980:intron |
GGAAATTTCCATCGAGCCCT+TGG | 0.422026 | 5_1:+15690572 | None:intergenic |
AAGCAACCTTTGCAAACAAC+TGG | 0.424495 | 5_1:+15692534 | None:intergenic |
TAAGAATTGTACCTGAAAAT+CGG | 0.431216 | 5_1:+15690899 | None:intergenic |
TGAATAATTTGATGATGAAA+AGG | 0.432945 | 5_1:+15690276 | None:intergenic |
TTTGGTCTCTTATCAGTCAA+TGG | 0.435531 | 5_1:+15690434 | None:intergenic |
AACTCACTTGAAATCAACTA+AGG | 0.446753 | 5_1:+15696245 | None:intergenic |
AAAAGAATTATATCATATCA+TGG | 0.448408 | 5_1:-15691801 | Msa0719980:CDS |
GGTCGATCCCTACCACCGCT+TGG | 0.456868 | 5_1:+15692854 | None:intergenic |
CTATGCAAGCCCTTCAGTAT+TGG | 0.458759 | 5_1:-15693387 | Msa0719980:CDS |
ATCGACCAGTTGCCAACTCT+GGG | 0.459369 | 5_1:-15692838 | Msa0719980:CDS |
ATGTTTCAGGTTATTAAAAG+TGG | 0.465113 | 5_1:-15696591 | Msa0719980:intron |
CAGTTGCCAACTCTGGGGTA+TGG | 0.466803 | 5_1:-15692832 | Msa0719980:CDS |
AGCAGCAATGCAATAATAGC+TGG | 0.469163 | 5_1:+15693571 | None:intergenic |
TGGTATGCTTCAAAGACAAA+AGG | 0.469699 | 5_1:+15696324 | None:intergenic |
CAACTCTGGGGTATGGGCAC+CGG | 0.473989 | 5_1:-15692825 | Msa0719980:intron |
TCGCAGCCATGGAAGTAGTT+CGG | 0.476275 | 5_1:-15690950 | Msa0719980:exon |
AAGAAGAATATGAGGCTCTA+GGG | 0.478399 | 5_1:+15698181 | None:intergenic |
GCGGTTGAAGGAGAAGAAAA+TGG | 0.480178 | 5_1:+15698216 | None:intergenic |
GGTAATGGTACATATAATAA+GGG | 0.480317 | 5_1:+15694246 | None:intergenic |
TTGAAAAGAAAATATTTGAC+AGG | 0.480447 | 5_1:+15690551 | None:intergenic |
GACTAATCAATATGATGTGC+TGG | 0.480585 | 5_1:-15691029 | Msa0719980:CDS |
GAAGAAGAATATGAGGCTCT+AGG | 0.482679 | 5_1:+15698180 | None:intergenic |
TACACGAAGTCTGAAGGAAA+TGG | 0.484728 | 5_1:-15693185 | Msa0719980:CDS |
GATCGACCAGTTGCCAACTC+TGG | 0.486441 | 5_1:-15692839 | Msa0719980:CDS |
CCAAACATGTAGTAGTCAAA+AGG | 0.489757 | 5_1:+15696285 | None:intergenic |
TGTTCTTTCTGGAATAAAGA+AGG | 0.494479 | 5_1:-15697102 | Msa0719980:CDS |
GTACATATGTTAGATAGGAT+TGG | 0.500169 | 5_1:-15692587 | Msa0719980:CDS |
ACCAGGTCATATCTATCCTA+TGG | 0.501822 | 5_1:-15691960 | Msa0719980:CDS |
TTTGACCTCTGCTTATACTG+TGG | 0.503827 | 5_1:+15690247 | None:intergenic |
AGTTGCCAACTCTGGGGTAT+GGG | 0.506428 | 5_1:-15692831 | Msa0719980:CDS |
CAGTTTCCTTGTCGCAGCCA+TGG | 0.507421 | 5_1:-15690961 | Msa0719980:CDS |
GTTCTACAGATTTATGTGGC+AGG | 0.508344 | 5_1:-15693432 | Msa0719980:intron |
CCAACCTTAGAATTTGGTAA+TGG | 0.514063 | 5_1:+15694231 | None:intergenic |
TTCTTGTGAAAATCCTGAAA+AGG | 0.514517 | 5_1:-15691730 | Msa0719980:intron |
AAGGAACACCATACCTTAAG+TGG | 0.516572 | 5_1:+15691908 | None:intergenic |
GATTGCCCCAAGCGGTGGTA+GGG | 0.516655 | 5_1:-15692861 | Msa0719980:CDS |
GCAAGCCCTTCAGTATTGGC+AGG | 0.519641 | 5_1:-15693383 | Msa0719980:intron |
ATCAGTCAATGGACTGGATG+TGG | 0.519841 | 5_1:+15690445 | None:intergenic |
CATACCCCAGAGTTGGCAAC+TGG | 0.523117 | 5_1:+15692833 | None:intergenic |
GTCCACTGAAGAAGAATCAA+AGG | 0.524090 | 5_1:+15692015 | None:intergenic |
ACCAAGTTCTCAGCAATATG+TGG | 0.525585 | 5_1:+15693535 | None:intergenic |
ATTATATCATATCATGGGAC+TGG | 0.526296 | 5_1:-15691795 | Msa0719980:CDS |
ACCCTTTGATTCTTCTTCAG+TGG | 0.526415 | 5_1:-15692017 | Msa0719980:CDS |
CTTGTTCATTTCTGGCATTG+AGG | 0.527774 | 5_1:+15697947 | None:intergenic |
GCATAACCAGTTGTTTGCAA+AGG | 0.529073 | 5_1:-15692540 | Msa0719980:intron |
TACTGCATCCAAGGGCTCGA+TGG | 0.529105 | 5_1:-15690580 | Msa0719980:three_prime_UTR |
GGATTGCCCCAAGCGGTGGT+AGG | 0.529108 | 5_1:-15692862 | Msa0719980:CDS |
TTATTAGTATAGAAAGCAAG+AGG | 0.529389 | 5_1:+15698027 | None:intergenic |
TCCCACTATTGCTGAAGGGA+TGG | 0.530075 | 5_1:-15697057 | Msa0719980:CDS |
TATCAGTAATCTGTTTCAGA+AGG | 0.532309 | 5_1:-15690508 | Msa0719980:three_prime_UTR |
TAGCTGGATCAGCTTCACTT+TGG | 0.539217 | 5_1:+15693587 | None:intergenic |
TTCACAAGAAGCAGTGGTGT+CGG | 0.540293 | 5_1:+15691743 | None:intergenic |
AATAGTGGGAGGCAAAGTTC+CGG | 0.541595 | 5_1:+15697070 | None:intergenic |
ACTGGTTATGCTTAAATAGA+GGG | 0.544103 | 5_1:+15692552 | None:intergenic |
AGCAAATACACGAAGTCTGA+AGG | 0.545413 | 5_1:-15693191 | Msa0719980:CDS |
TTGCCTCCCACTATTGCTGA+AGG | 0.547179 | 5_1:-15697062 | Msa0719980:CDS |
CACCATACCTTAAGTGGAGG+AGG | 0.547777 | 5_1:+15691914 | None:intergenic |
ACTGGATGTGGTAAGGAACT+AGG | 0.548773 | 5_1:+15690457 | None:intergenic |
AATGGAAGAGCAGCTTAAGC+AGG | 0.550921 | 5_1:-15694419 | Msa0719980:intron |
AATCTCTGATGTGAATCAGT+TGG | 0.554900 | 5_1:+15690612 | None:intergenic |
GGCTGCGACAAGGAAACTGC+GGG | 0.561455 | 5_1:+15690965 | None:intergenic |
TCATGGCACAATATTGCCAT+AGG | 0.563505 | 5_1:+15691944 | None:intergenic |
AAAGAATTATATCATATCAT+GGG | 0.565588 | 5_1:-15691800 | Msa0719980:CDS |
TCTCTTATCAGTCAATGGAC+TGG | 0.565956 | 5_1:+15690439 | None:intergenic |
TCCATCCCTTCAGCAATAGT+GGG | 0.571387 | 5_1:+15697056 | None:intergenic |
TCAATGGACTGGATGTGGTA+AGG | 0.573722 | 5_1:+15690450 | None:intergenic |
ACTATCTTCGCTCTTTCTAG+GGG | 0.574261 | 5_1:+15694290 | None:intergenic |
ATAAAGAAGGAAGTAGAAGC+CGG | 0.579063 | 5_1:-15697089 | Msa0719980:CDS |
GTCGATCATTCAGGTCCACC+AGG | 0.579509 | 5_1:-15691977 | Msa0719980:CDS |
AGAAGAATATGAGGCTCTAG+GGG | 0.580479 | 5_1:+15698182 | None:intergenic |
TATCTTCGCTCTTTCTAGGG+GGG | 0.582786 | 5_1:+15694292 | None:intergenic |
AATGAACCTGCCAATACTGA+AGG | 0.584236 | 5_1:+15693377 | None:intergenic |
TCCACTGAAGAAGAATCAAA+GGG | 0.586505 | 5_1:+15692016 | None:intergenic |
ATTTGGATTGCCCCAAGCGG+TGG | 0.587858 | 5_1:-15692866 | Msa0719980:CDS |
CTCAATGCCAGAAATGAACA+AGG | 0.592909 | 5_1:-15697946 | Msa0719980:intron |
ATGAACCTGCCAATACTGAA+GGG | 0.595857 | 5_1:+15693378 | None:intergenic |
TCAAATCCGAACTACTTCCA+TGG | 0.597509 | 5_1:+15690944 | None:intergenic |
ACTCACTTGAAATCAACTAA+GGG | 0.600267 | 5_1:+15696246 | None:intergenic |
TGCCTCCCACTATTGCTGAA+GGG | 0.600537 | 5_1:-15697061 | Msa0719980:CDS |
AATGGTACATATAATAAGGG+AGG | 0.603023 | 5_1:+15694249 | None:intergenic |
CTACTTCCATGGCTGCGACA+AGG | 0.604817 | 5_1:+15690955 | None:intergenic |
ATGATTTAGAATTCAAGACT+AGG | 0.608001 | 5_1:+15698346 | None:intergenic |
CGGTGCCCATACCCCAGAGT+TGG | 0.608757 | 5_1:+15692826 | None:intergenic |
TCGATCCCTACCACCGCTTG+GGG | 0.610629 | 5_1:+15692856 | None:intergenic |
GTGGAGGAGGCATTATGTCA+TGG | 0.612943 | 5_1:+15691927 | None:intergenic |
TTGTGCAGCACTTCTTACGT+TGG | 0.613885 | 5_1:-15694463 | Msa0719980:intron |
ATTAGTCACAGAATCATACA+AGG | 0.614049 | 5_1:+15691045 | None:intergenic |
ATACTGAAGGGCTTGCATAG+AGG | 0.616766 | 5_1:+15693390 | None:intergenic |
GAAGGGCTTGCATAGAGGAT+CGG | 0.619436 | 5_1:+15693395 | None:intergenic |
CTATCTTCGCTCTTTCTAGG+GGG | 0.620555 | 5_1:+15694291 | None:intergenic |
TCTTCCATTTGAATGAAAAG+GGG | 0.627956 | 5_1:+15694433 | None:intergenic |
GCCATAGGATAGATATGACC+TGG | 0.629103 | 5_1:+15691959 | None:intergenic |
GTAGTTGCATTAGATCGAAG+AGG | 0.630367 | 5_1:+15698111 | None:intergenic |
CTTCAGTGGACAATATGCGA+AGG | 0.630655 | 5_1:-15692003 | Msa0719980:CDS |
TGGCTGCGACAAGGAAACTG+CGG | 0.638817 | 5_1:+15690964 | None:intergenic |
CTTAAATAGAGGGTTAGACA+TGG | 0.643216 | 5_1:+15692562 | None:intergenic |
GGATGTGGTAAGGAACTAGG+AGG | 0.656917 | 5_1:+15690460 | None:intergenic |
GAAGAAGAAGAACTACGAAG+AGG | 0.658333 | 5_1:+15698144 | None:intergenic |
ATCCCTTCAGCAATAGTGGG+AGG | 0.659784 | 5_1:+15697059 | None:intergenic |
GAACACCATACCTTAAGTGG+AGG | 0.667740 | 5_1:+15691911 | None:intergenic |
GTGCTGGAGTCTGCCATACA+CGG | 0.674923 | 5_1:-15691013 | Msa0719980:CDS |
AATTGGATGATGATTCACAT+TGG | 0.685531 | 5_1:-15690220 | Msa0719980:three_prime_UTR |
ATGCACATACCTTAAAAGCG+TGG | 0.687163 | 5_1:+15693162 | None:intergenic |
ACGTGCCACAGTATAAGCAG+AGG | 0.702190 | 5_1:-15690252 | Msa0719980:three_prime_UTR |
GATGTGGTAAGGAACTAGGA+GGG | 0.704901 | 5_1:+15690461 | None:intergenic |
GAAGAATATGAGGCTCTAGG+GGG | 0.707099 | 5_1:+15698183 | None:intergenic |
ATAGGATAGATATGACCTGG+TGG | 0.707955 | 5_1:+15691962 | None:intergenic |
TCGACCAGTTGCCAACTCTG+GGG | 0.718939 | 5_1:-15692837 | Msa0719980:CDS |
ATAATTTGGATTGCCCCAAG+CGG | 0.725991 | 5_1:-15692869 | Msa0719980:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAAAGTAAAATTGTTTT+CGG | + | chr5_1:15690997-15691016 | None:intergenic | 10.0% |
!! | ATGGAAAATAAAATAATAAA+TGG | - | chr5_1:15692976-15692995 | Msa0719980:intron | 10.0% |
!! | TGGAAAATAAAATAATAAAT+GGG | - | chr5_1:15692977-15692996 | Msa0719980:intron | 10.0% |
!! | TTTCAAAAAAAAAAAAAAAC+GGG | + | chr5_1:15693830-15693849 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTGAAAGAA+AGG | + | chr5_1:15696104-15696123 | None:intergenic | 10.0% |
!! | ATTGTAAATTTGTAATATAA+TGG | - | chr5_1:15697243-15697262 | Msa0719980:intron | 10.0% |
!! | AAAATTGGTAAAATTATATT+TGG | + | chr5_1:15698130-15698149 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTTTGTATC+AGG | - | chr5_1:15698146-15698165 | Msa0719980:CDS | 10.0% |
!!! | TATTTGAGTTGTTTATTTAT+TGG | - | chr5_1:15690862-15690881 | Msa0719980:intron | 15.0% |
!! | AATTAAAAGGTTATAAACAT+AGG | + | chr5_1:15691568-15691587 | None:intergenic | 15.0% |
!! | AACAGTTAACTTTAATTAAA+AGG | + | chr5_1:15691581-15691600 | None:intergenic | 15.0% |
!!! | CAATGTAATTTTGATTTTAA+CGG | - | chr5_1:15692590-15692609 | Msa0719980:CDS | 15.0% |
!! | CATTCAATAAATATTGAATT+TGG | + | chr5_1:15693223-15693242 | None:intergenic | 15.0% |
!! | TTCAAAAAAAAAAAAAAACG+GGG | + | chr5_1:15693829-15693848 | None:intergenic | 15.0% |
!! | TTTATGAATATGTTAACATA+GGG | + | chr5_1:15694867-15694886 | None:intergenic | 15.0% |
!! | ATTTATGAATATGTTAACAT+AGG | + | chr5_1:15694868-15694887 | None:intergenic | 15.0% |
!!! | TTTTAATTTGATATTTATGC+TGG | - | chr5_1:15695202-15695221 | Msa0719980:intron | 15.0% |
!! | AAGCATATACAAAATAATAA+AGG | + | chr5_1:15695923-15695942 | None:intergenic | 15.0% |
!! | AAACCAACTAAATTAAAAAA+TGG | + | chr5_1:15696251-15696270 | None:intergenic | 15.0% |
!! | AATAAGAGAAAAATATATCA+GGG | + | chr5_1:15696675-15696694 | None:intergenic | 15.0% |
!! | AAATAAGAGAAAAATATATC+AGG | + | chr5_1:15696676-15696695 | None:intergenic | 15.0% |
!! | AAAAGAATTATATCATATCA+TGG | - | chr5_1:15696742-15696761 | Msa0719980:intron | 15.0% |
!! | AAAGAATTATATCATATCAT+GGG | - | chr5_1:15696743-15696762 | Msa0719980:intron | 15.0% |
!!! | GACTTTTTTAATTTGATTAT+TGG | - | chr5_1:15697430-15697449 | Msa0719980:intron | 15.0% |
!! | ATTTAACTCAAAATTACAAA+TGG | + | chr5_1:15698210-15698229 | None:intergenic | 15.0% |
!! | ATATTAGCAGAAATTTCTTT+AGG | + | chr5_1:15690549-15690568 | None:intergenic | 20.0% |
!! | TAAAGAAATTTCTGCTAATA+TGG | - | chr5_1:15690548-15690567 | Msa0719980:three_prime_UTR | 20.0% |
!! | TGATTATACTCTTTCTTTAA+AGG | + | chr5_1:15690840-15690859 | None:intergenic | 20.0% |
!! | TTTATTTATTGGCATAAGTT+TGG | - | chr5_1:15690873-15690892 | Msa0719980:intron | 20.0% |
!!! | ATTTTTTCTTTTGTGTTTGT+AGG | - | chr5_1:15691177-15691196 | Msa0719980:intron | 20.0% |
!! | TGACTATTGTTAACTAAAAT+TGG | - | chr5_1:15691310-15691329 | Msa0719980:intron | 20.0% |
!! | GACTATTGTTAACTAAAATT+GGG | - | chr5_1:15691311-15691330 | Msa0719980:intron | 20.0% |
!!! | TTTATTAGATCGCATATTTT+TGG | - | chr5_1:15692017-15692036 | Msa0719980:CDS | 20.0% |
!!! | TTATTTTATTTTCCATCTGT+GGG | + | chr5_1:15692972-15692991 | None:intergenic | 20.0% |
!!! | ATTATTTTATTTTCCATCTG+TGG | + | chr5_1:15692973-15692992 | None:intergenic | 20.0% |
!! | AACAGATAAATTCATAACTA+GGG | + | chr5_1:15693779-15693798 | None:intergenic | 20.0% |
!! | TCAAAAAAAAAAAAAAACGG+GGG | + | chr5_1:15693828-15693847 | None:intergenic | 20.0% |
!! | ACATGCTTAATTTAAAGATT+TGG | - | chr5_1:15693919-15693938 | Msa0719980:intron | 20.0% |
!! | TACATTTAAGAATAGATATG+AGG | + | chr5_1:15694053-15694072 | None:intergenic | 20.0% |
!! | GCATATTAAAATAAATAGCA+AGG | + | chr5_1:15694445-15694464 | None:intergenic | 20.0% |
!!! | GATTGTTTTCAATATTTCAT+TGG | - | chr5_1:15694553-15694572 | Msa0719980:intron | 20.0% |
!! | TGTTAACATATTCATAAATG+TGG | - | chr5_1:15694869-15694888 | Msa0719980:intron | 20.0% |
!! | GTTAACATATTCATAAATGT+GGG | - | chr5_1:15694870-15694889 | Msa0719980:intron | 20.0% |
!! | TTAACATATTCATAAATGTG+GGG | - | chr5_1:15694871-15694890 | Msa0719980:intron | 20.0% |
!!! | ATTACGTTTTTCATTTATGT+AGG | - | chr5_1:15695261-15695280 | Msa0719980:intron | 20.0% |
!! | TTGAATCCAAATCTTAAAAA+AGG | - | chr5_1:15695507-15695526 | Msa0719980:intron | 20.0% |
!! | TGAATCCAAATCTTAAAAAA+GGG | - | chr5_1:15695508-15695527 | Msa0719980:intron | 20.0% |
!!! | AATGTACTTTTTTTTGTTAC+AGG | - | chr5_1:15695639-15695658 | Msa0719980:intron | 20.0% |
!! | GAAACAAAATATCATTAACT+GGG | - | chr5_1:15695842-15695861 | Msa0719980:intron | 20.0% |
!! | ATAAAGTACATATGTTAGAT+AGG | - | chr5_1:15695951-15695970 | Msa0719980:intron | 20.0% |
!!! | TATGTTGGTTTTATAACAAA+CGG | + | chr5_1:15696080-15696099 | None:intergenic | 20.0% |
!!! | AGGTAATAAAAGTATATACT+CGG | + | chr5_1:15696285-15696304 | None:intergenic | 20.0% |
!! | AAAACACTATTAAATACAGA+CGG | - | chr5_1:15697006-15697025 | Msa0719980:intron | 20.0% |
!! | TAAATTCCATATAAGCTATT+AGG | - | chr5_1:15697063-15697082 | Msa0719980:CDS | 20.0% |
!! | TAAATGTTAATACTCAGTTT+CGG | + | chr5_1:15697187-15697206 | None:intergenic | 20.0% |
!!! | TTAATTTGATTATTGGAACA+TGG | - | chr5_1:15697437-15697456 | Msa0719980:intron | 20.0% |
!! | TAATTTGATTATTGGAACAT+GGG | - | chr5_1:15697438-15697457 | Msa0719980:intron | 20.0% |
!! | AACAAATCTTGATTATTAGA+TGG | - | chr5_1:15697750-15697769 | Msa0719980:intron | 20.0% |
!! | ACAAATCTTGATTATTAGAT+GGG | - | chr5_1:15697751-15697770 | Msa0719980:intron | 20.0% |
!! | AAAATGCTAAAATTGAAGAT+TGG | + | chr5_1:15697820-15697839 | None:intergenic | 20.0% |
!!! | TTCAATTTTAGCATTTTCTA+CGG | - | chr5_1:15697823-15697842 | Msa0719980:intron | 20.0% |
!! | TTGAAAAGAAAATATTTGAC+AGG | + | chr5_1:15697995-15698014 | None:intergenic | 20.0% |
!!! | TGAATAATTTGATGATGAAA+AGG | + | chr5_1:15698270-15698289 | None:intergenic | 20.0% |
!! | ATGATTTAGAATTCAAGACT+AGG | + | chr5_1:15690200-15690219 | None:intergenic | 25.0% |
!! | AAGATTTCTTCTTTTTGTGA+CGG | + | chr5_1:15690290-15690309 | None:intergenic | 25.0% |
! | TTATTAGTATAGAAAGCAAG+AGG | + | chr5_1:15690519-15690538 | None:intergenic | 25.0% |
! | ATAAGTTGTTTATCCAAACA+TGG | - | chr5_1:15691075-15691094 | Msa0719980:intron | 25.0% |
! | ATCAAACCACAAACTAAAAA+TGG | + | chr5_1:15691346-15691365 | None:intergenic | 25.0% |
!! | TTACTGCACTTTTATAGTTA+AGG | + | chr5_1:15691522-15691541 | None:intergenic | 25.0% |
!!! | AAACAATTTCTAGTATCTTG+TGG | - | chr5_1:15691622-15691641 | Msa0719980:intron | 25.0% |
!!! | AACAATTTCTAGTATCTTGT+GGG | - | chr5_1:15691623-15691642 | Msa0719980:intron | 25.0% |
!!! | CAGTTAAAGAAAGCTATTTT+TGG | + | chr5_1:15691691-15691710 | None:intergenic | 25.0% |
! | TGATATAGTTCGTTAATTTC+CGG | - | chr5_1:15691742-15691761 | Msa0719980:CDS | 25.0% |
! | CTTTATGATGATAAAAACAG+TGG | - | chr5_1:15691793-15691812 | Msa0719980:CDS | 25.0% |
!! | ACTTTTAATAACCTGAAACA+TGG | + | chr5_1:15691953-15691972 | None:intergenic | 25.0% |
!!! | ATGTTTCAGGTTATTAAAAG+TGG | - | chr5_1:15691952-15691971 | Msa0719980:CDS | 25.0% |
!!! | AAATCAGACTGATTTTTAAC+AGG | - | chr5_1:15692194-15692213 | Msa0719980:intron | 25.0% |
! | TTGAATTGCTTAATAAACTC+TGG | + | chr5_1:15692705-15692724 | None:intergenic | 25.0% |
! | AAAAAAAAGGAAGAAAGAAG+TGG | - | chr5_1:15693076-15693095 | Msa0719980:intron | 25.0% |
! | TTATCGTCATTTATATCCTA+TGG | + | chr5_1:15693599-15693618 | None:intergenic | 25.0% |
!! | AATGAGATCATAGATTTTGT+CGG | + | chr5_1:15693624-15693643 | None:intergenic | 25.0% |
! | CAACAGATAAATTCATAACT+AGG | + | chr5_1:15693780-15693799 | None:intergenic | 25.0% |
! | CAAAAAAAAAAAAAAACGGG+GGG | + | chr5_1:15693827-15693846 | None:intergenic | 25.0% |
! | AAAAATAACTTGATCCTTCT+TGG | - | chr5_1:15693847-15693866 | Msa0719980:intron | 25.0% |
!! | GGTAATGGTACATATAATAA+GGG | + | chr5_1:15694300-15694319 | None:intergenic | 25.0% |
!!! | TGGTAATGGTACATATAATA+AGG | + | chr5_1:15694301-15694320 | None:intergenic | 25.0% |
!! | AAATGTTGACATAATTTGCA+TGG | + | chr5_1:15694470-15694489 | None:intergenic | 25.0% |
! | TGATAACTGTAGTACTTAAT+GGG | + | chr5_1:15694752-15694771 | None:intergenic | 25.0% |
! | AAGATTGAAAAAATTACTGC+AGG | - | chr5_1:15694905-15694924 | Msa0719980:intron | 25.0% |
! | AGATTGAAAAAATTACTGCA+GGG | - | chr5_1:15694906-15694925 | Msa0719980:intron | 25.0% |
! | ACATAAATCTGTAGAACAAA+AGG | + | chr5_1:15695108-15695127 | None:intergenic | 25.0% |
!! | TTTTGTTCTACAGATTTATG+TGG | - | chr5_1:15695107-15695126 | Msa0719980:intron | 25.0% |
! | CTTCAAATTTGTAGAAAACA+TGG | + | chr5_1:15695477-15695496 | None:intergenic | 25.0% |
! | ACATCGACATATCAATATAA+GGG | + | chr5_1:15695611-15695630 | None:intergenic | 25.0% |
! | AACATCGACATATCAATATA+AGG | + | chr5_1:15695612-15695631 | None:intergenic | 25.0% |
! | TCGATCATATGATTCATATT+CGG | - | chr5_1:15695820-15695839 | Msa0719980:intron | 25.0% |
! | GGAAACAAAATATCATTAAC+TGG | - | chr5_1:15695841-15695860 | Msa0719980:intron | 25.0% |
!!! | ATGTTGGTTTTATAACAAAC+GGG | + | chr5_1:15696079-15696098 | None:intergenic | 25.0% |
!!! | GCACCATTTTTTAATTTAGT+TGG | - | chr5_1:15696245-15696264 | Msa0719980:intron | 25.0% |
! | TTCATGATAAGCAAATCATA+AGG | + | chr5_1:15696305-15696324 | None:intergenic | 25.0% |
! | AGACTTATGCATATTTCATA+TGG | - | chr5_1:15696400-15696419 | Msa0719980:intron | 25.0% |
! | ATAATAAATGTAGAGATCTG+AGG | + | chr5_1:15696871-15696890 | None:intergenic | 25.0% |
! | AATAGTCCTAATAGCTTATA+TGG | + | chr5_1:15697072-15697091 | None:intergenic | 25.0% |
! | ATAAGCTATTAGGACTATTA+AGG | - | chr5_1:15697073-15697092 | Msa0719980:CDS | 25.0% |
! | TATCCAAATTTCTCATTCAA+AGG | + | chr5_1:15697118-15697137 | None:intergenic | 25.0% |
! | TAACATTTACAAACATTTGC+TGG | - | chr5_1:15697198-15697217 | Msa0719980:intron | 25.0% |
! | CAAAGAATCTATGTATCTAA+CGG | + | chr5_1:15697411-15697430 | None:intergenic | 25.0% |
! | TAAGAATTGTACCTGAAAAT+CGG | + | chr5_1:15697647-15697666 | None:intergenic | 25.0% |
!! | GTTATTTGCTTGAATTTTCA+TGG | - | chr5_1:15697845-15697864 | Msa0719980:intron | 25.0% |
AGAAGAAGAAGAAGAATATG+AGG | + | chr5_1:15690373-15690392 | None:intergenic | 30.0% | |
AAAGATACCTTGTTCATTTC+TGG | + | chr5_1:15690607-15690626 | None:intergenic | 30.0% | |
ATAAGTTTGGTTAGACTGTT+TGG | - | chr5_1:15690886-15690905 | Msa0719980:intron | 30.0% | |
TAAGTTTGGTTAGACTGTTT+GGG | - | chr5_1:15690887-15690906 | Msa0719980:intron | 30.0% | |
ACAAACTAAAAATGGCTTCT+TGG | + | chr5_1:15691338-15691357 | None:intergenic | 30.0% | |
!!! | AAGAAGCCATTTTTAGTTTG+TGG | - | chr5_1:15691337-15691356 | Msa0719980:intron | 30.0% |
!! | TGTTCTTTCTGGAATAAAGA+AGG | - | chr5_1:15691441-15691460 | Msa0719980:intron | 30.0% |
GATATAGTTCGTTAATTTCC+GGG | - | chr5_1:15691743-15691762 | Msa0719980:CDS | 30.0% | |
AATACAATCTCATCTGCTTT+GGG | + | chr5_1:15691982-15692001 | None:intergenic | 30.0% | |
!!! | ATCAGTCTGATTTTTTAGCA+TGG | + | chr5_1:15692187-15692206 | None:intergenic | 30.0% |
! | CTAAGGGACGAATATAATTT+TGG | + | chr5_1:15692284-15692303 | None:intergenic | 30.0% |
ACTCACTTGAAATCAACTAA+GGG | + | chr5_1:15692300-15692319 | None:intergenic | 30.0% | |
AACTCACTTGAAATCAACTA+AGG | + | chr5_1:15692301-15692320 | None:intergenic | 30.0% | |
! | GATTAGTCAAATTTCATGCA+TGG | - | chr5_1:15692409-15692428 | Msa0719980:intron | 30.0% |
CAATAAGCTAAGATTGTGAT+GGG | - | chr5_1:15692465-15692484 | Msa0719980:intron | 30.0% | |
AAGTATAAGATATGCATGCT+TGG | - | chr5_1:15692488-15692507 | Msa0719980:intron | 30.0% | |
AGTATAAGATATGCATGCTT+GGG | - | chr5_1:15692489-15692508 | Msa0719980:intron | 30.0% | |
GCTTAACATGATAATCCTAT+GGG | + | chr5_1:15692532-15692551 | None:intergenic | 30.0% | |
TGCTTAACATGATAATCCTA+TGG | + | chr5_1:15692533-15692552 | None:intergenic | 30.0% | |
ATTGCTTAATAAACTCTGGA+AGG | + | chr5_1:15692701-15692720 | None:intergenic | 30.0% | |
ATTAAGCAATTCAATCGTTC+TGG | - | chr5_1:15692711-15692730 | Msa0719980:intron | 30.0% | |
ATACATTAGTGTATGACACA+TGG | - | chr5_1:15692872-15692891 | Msa0719980:CDS | 30.0% | |
!!! | ATAGTAGATTTTGGTGTTCA+AGG | - | chr5_1:15692895-15692914 | Msa0719980:intron | 30.0% |
!!! | TAGTAGATTTTGGTGTTCAA+GGG | - | chr5_1:15692896-15692915 | Msa0719980:intron | 30.0% |
GGATATTGTAGAAGCAATTA+TGG | - | chr5_1:15692917-15692936 | Msa0719980:intron | 30.0% | |
GAACTACAAAATTGTATTGG+AGG | - | chr5_1:15693178-15693197 | Msa0719980:CDS | 30.0% | |
TACAAAATTGTATTGGAGGA+GGG | - | chr5_1:15693182-15693201 | Msa0719980:CDS | 30.0% | |
!!! | TTAGGCTTTGTTTAGGATTT+TGG | + | chr5_1:15693374-15693393 | None:intergenic | 30.0% |
!!! | AGATTTTGACTACATCTTAC+AGG | - | chr5_1:15693660-15693679 | Msa0719980:intron | 30.0% |
!!! | GATTTTGACTACATCTTACA+GGG | - | chr5_1:15693661-15693680 | Msa0719980:intron | 30.0% |
TTCTATACATACAACCAAGA+AGG | + | chr5_1:15693864-15693883 | None:intergenic | 30.0% | |
TCTTCCATTTGAATGAAAAG+GGG | + | chr5_1:15694113-15694132 | None:intergenic | 30.0% | |
CTCTTCCATTTGAATGAAAA+GGG | + | chr5_1:15694114-15694133 | None:intergenic | 30.0% | |
AGCAAGCATTTGAATGAAAA+GGG | + | chr5_1:15694177-15694196 | None:intergenic | 30.0% | |
AAGCAAGCATTTGAATGAAA+AGG | + | chr5_1:15694178-15694197 | None:intergenic | 30.0% | |
AATGGTACATATAATAAGGG+AGG | + | chr5_1:15694297-15694316 | None:intergenic | 30.0% | |
TGTACCATTACCAAATTCTA+AGG | - | chr5_1:15694308-15694327 | Msa0719980:intron | 30.0% | |
ATGCATAAGCTTGACATATA+TGG | - | chr5_1:15694349-15694368 | Msa0719980:intron | 30.0% | |
!! | TGTAAAAGTTAGTCTTCTTC+AGG | - | chr5_1:15694397-15694416 | Msa0719980:intron | 30.0% |
TCAATCATAAATCTAGACTG+TGG | - | chr5_1:15694504-15694523 | Msa0719980:intron | 30.0% | |
TTGAAAACAATCAAACGAGA+CGG | + | chr5_1:15694545-15694564 | None:intergenic | 30.0% | |
AAACCAAATTTACCAGTGTA+AGG | - | chr5_1:15694647-15694666 | Msa0719980:intron | 30.0% | |
GATAACTGTAGTACTTAATG+GGG | + | chr5_1:15694751-15694770 | None:intergenic | 30.0% | |
GTGATAACTGTAGTACTTAA+TGG | + | chr5_1:15694753-15694772 | None:intergenic | 30.0% | |
ATACACAAGAACCCATAAAT+CGG | + | chr5_1:15694839-15694858 | None:intergenic | 30.0% | |
!!! | CTCTTCCCTTTTTTAAGATT+TGG | + | chr5_1:15695516-15695535 | None:intergenic | 30.0% |
CACACAAGATACTATACAAA+GGG | + | chr5_1:15695563-15695582 | None:intergenic | 30.0% | |
ACACACAAGATACTATACAA+AGG | + | chr5_1:15695564-15695583 | None:intergenic | 30.0% | |
TGTGTGTAATAGTTGTTGAT+TGG | - | chr5_1:15695577-15695596 | Msa0719980:intron | 30.0% | |
!!! | ACTTTTTTTTGTTACAGGAG+TGG | - | chr5_1:15695644-15695663 | Msa0719980:intron | 30.0% |
TTACAAGAAAGTGAACTTAC+CGG | + | chr5_1:15695740-15695759 | None:intergenic | 30.0% | |
GTACATATGTTAGATAGGAT+TGG | - | chr5_1:15695956-15695975 | Msa0719980:intron | 30.0% | |
ACTGGTTATGCTTAAATAGA+GGG | + | chr5_1:15695994-15696013 | None:intergenic | 30.0% | |
AACTGGTTATGCTTAAATAG+AGG | + | chr5_1:15695995-15696014 | None:intergenic | 30.0% | |
!! | TGACCTTTTTCACTGAAAAT+AGG | - | chr5_1:15696034-15696053 | Msa0719980:intron | 30.0% |
!! | TTTTGAAAGAAAGGCTATGT+TGG | + | chr5_1:15696095-15696114 | None:intergenic | 30.0% |
AGTACATGGATAATTCATCA+CGG | - | chr5_1:15696156-15696175 | Msa0719980:intron | 30.0% | |
!! | TGATTTGCTTATCATGAAAG+CGG | - | chr5_1:15696307-15696326 | Msa0719980:CDS | 30.0% |
ATGGAAATTCATAATCAGCA+TGG | + | chr5_1:15696485-15696504 | None:intergenic | 30.0% | |
TTTCAACCTGCAAAATTACA+CGG | + | chr5_1:15696708-15696727 | None:intergenic | 30.0% | |
! | TTGCAGGTTGAAAAAGAAAT+TGG | - | chr5_1:15696715-15696734 | Msa0719980:intron | 30.0% |
! | TGCAGGTTGAAAAAGAAATT+GGG | - | chr5_1:15696716-15696735 | Msa0719980:intron | 30.0% |
ATTATATCATATCATGGGAC+TGG | - | chr5_1:15696748-15696767 | Msa0719980:intron | 30.0% | |
TTCTTGTGAAAATCCTGAAA+AGG | - | chr5_1:15696813-15696832 | Msa0719980:intron | 30.0% | |
TATCCTTGTAGTAAGAAGTA+TGG | - | chr5_1:15696947-15696966 | Msa0719980:intron | 30.0% | |
!!! | TTTGGTACTGTTCTTTTTTG+TGG | + | chr5_1:15697143-15697162 | None:intergenic | 30.0% |
ACATAGATCATTAACTACAG+AGG | + | chr5_1:15697274-15697293 | None:intergenic | 30.0% | |
!!! | TTTTAAGTTCAGAACGATGA+GGG | + | chr5_1:15697354-15697373 | None:intergenic | 30.0% |
!!! | TTTTTAAGTTCAGAACGATG+AGG | + | chr5_1:15697355-15697374 | None:intergenic | 30.0% |
AACGGATAATAAATCATGTG+TGG | + | chr5_1:15697393-15697412 | None:intergenic | 30.0% | |
ATTAGTCACAGAATCATACA+AGG | + | chr5_1:15697501-15697520 | None:intergenic | 30.0% | |
TTCAGGTACAATTCTTACTT+TGG | - | chr5_1:15697650-15697669 | Msa0719980:intron | 30.0% | |
TTGAAAACGTTTCTCATTGA+TGG | - | chr5_1:15697723-15697742 | Msa0719980:intron | 30.0% | |
! | TTTTGTAGATGCAAGTTACA+AGG | - | chr5_1:15697893-15697912 | Msa0719980:intron | 30.0% |
CTGAAACAGATTACTGATAA+TGG | + | chr5_1:15698034-15698053 | None:intergenic | 30.0% | |
TATCAGTAATCTGTTTCAGA+AGG | - | chr5_1:15698035-15698054 | Msa0719980:CDS | 30.0% | |
AATTGGATGATGATTCACAT+TGG | - | chr5_1:15698323-15698342 | Msa0719980:five_prime_UTR | 30.0% | |
AAGAAGAATATGAGGCTCTA+GGG | + | chr5_1:15690365-15690384 | None:intergenic | 35.0% | |
AGATCGAAGAGGAAAAAAAG+TGG | + | chr5_1:15690424-15690443 | None:intergenic | 35.0% | |
TCTTCTTCTGTAACAACTTC+TGG | - | chr5_1:15690465-15690484 | Msa0719980:three_prime_UTR | 35.0% | |
AGCAAGAGGAGAAAAATAAG+AGG | + | chr5_1:15690505-15690524 | None:intergenic | 35.0% | |
!!! | GTTGCTGCTTTTTCTTTTTG+TGG | - | chr5_1:15691285-15691304 | Msa0719980:intron | 35.0% |
TTGTTTGCAGATGTTCTTTC+TGG | - | chr5_1:15691430-15691449 | Msa0719980:intron | 35.0% | |
ATAAAGAAGGAAGTAGAAGC+CGG | - | chr5_1:15691454-15691473 | Msa0719980:intron | 35.0% | |
AGTTTACTCATGATTCACTG+TGG | - | chr5_1:15691656-15691675 | Msa0719980:intron | 35.0% | |
GAAACATGGTTGCAAACAAA+AGG | + | chr5_1:15691939-15691958 | None:intergenic | 35.0% | |
TTTGTTTGCAACCATGTTTC+AGG | - | chr5_1:15691939-15691958 | Msa0719980:CDS | 35.0% | |
CAATACAATCTCATCTGCTT+TGG | + | chr5_1:15691983-15692002 | None:intergenic | 35.0% | |
!!! | TCGCATATTTTTGGATGTGA+AGG | - | chr5_1:15692026-15692045 | Msa0719980:intron | 35.0% |
AATCAAAGAGTCTGTATGCA+AGG | + | chr5_1:15692094-15692113 | None:intergenic | 35.0% | |
TGGTATGCTTCAAAGACAAA+AGG | + | chr5_1:15692222-15692241 | None:intergenic | 35.0% | |
CCAAACATGTAGTAGTCAAA+AGG | + | chr5_1:15692261-15692280 | None:intergenic | 35.0% | |
!! | CCTTTTGACTACTACATGTT+TGG | - | chr5_1:15692258-15692277 | Msa0719980:intron | 35.0% |
CAATGCAAAAGAGAAGAAAG+AGG | + | chr5_1:15692340-15692359 | None:intergenic | 35.0% | |
GCAATAAGCTAAGATTGTGA+TGG | - | chr5_1:15692464-15692483 | Msa0719980:intron | 35.0% | |
! | CATGATAATCCTATGGGTTA+TGG | + | chr5_1:15692526-15692545 | None:intergenic | 35.0% |
GATTATCATGTTAAGCACGT+TGG | - | chr5_1:15692536-15692555 | Msa0719980:intron | 35.0% | |
GGTTGAAGCTAATGGTTTAT+CGG | - | chr5_1:15692557-15692576 | Msa0719980:CDS | 35.0% | |
GTTGAAGCTAATGGTTTATC+GGG | - | chr5_1:15692558-15692577 | Msa0719980:CDS | 35.0% | |
ACAACTCACATTTACGCTTA+AGG | - | chr5_1:15692795-15692814 | Msa0719980:intron | 35.0% | |
! | GACACATGGATAGTAGATTT+TGG | - | chr5_1:15692886-15692905 | Msa0719980:intron | 35.0% |
GAAGAAAGAAGTGGAAAGAA+TGG | - | chr5_1:15693085-15693104 | Msa0719980:intron | 35.0% | |
AATACGAAATCCCCCTAATT+TGG | - | chr5_1:15693153-15693172 | Msa0719980:intron | 35.0% | |
ATACGAAATCCCCCTAATTT+GGG | - | chr5_1:15693154-15693173 | Msa0719980:intron | 35.0% | |
TTTGTAGTTCCCCCAAATTA+GGG | + | chr5_1:15693168-15693187 | None:intergenic | 35.0% | |
! | TTTTGTAGTTCCCCCAAATT+AGG | + | chr5_1:15693169-15693188 | None:intergenic | 35.0% |
GGGGAACTACAAAATTGTAT+TGG | - | chr5_1:15693175-15693194 | Msa0719980:CDS | 35.0% | |
CTACAAAATTGTATTGGAGG+AGG | - | chr5_1:15693181-15693200 | Msa0719980:CDS | 35.0% | |
!! | CTTTGTTTAGGATTTTGGAG+GGG | + | chr5_1:15693369-15693388 | None:intergenic | 35.0% |
!!! | GCTTTGTTTAGGATTTTGGA+GGG | + | chr5_1:15693370-15693389 | None:intergenic | 35.0% |
TAAACAAAGCCTAAGACTCT+CGG | - | chr5_1:15693380-15693399 | Msa0719980:intron | 35.0% | |
AAAGAAAATCCGAGAGTCTT+AGG | + | chr5_1:15693392-15693411 | None:intergenic | 35.0% | |
AGTTTGACAAAACAGGAGTA+TGG | + | chr5_1:15693422-15693441 | None:intergenic | 35.0% | |
ATGAATAAACACGTGGTCAT+AGG | + | chr5_1:15693497-15693516 | None:intergenic | 35.0% | |
TATTCATTAGACCCTGCAAT+AGG | - | chr5_1:15693510-15693529 | Msa0719980:intron | 35.0% | |
ATTCATTAGACCCTGCAATA+GGG | - | chr5_1:15693511-15693530 | Msa0719980:intron | 35.0% | |
GATGTAGTCAAAATCTGCAA+AGG | + | chr5_1:15693656-15693675 | None:intergenic | 35.0% | |
CATAAGAGATCTCCATTTGA+GGG | + | chr5_1:15693710-15693729 | None:intergenic | 35.0% | |
TCATAAGAGATCTCCATTTG+AGG | + | chr5_1:15693711-15693730 | None:intergenic | 35.0% | |
AAAAAAAAAAAACGGGGGGA+GGG | + | chr5_1:15693823-15693842 | None:intergenic | 35.0% | |
AAAAAAAAAAAAACGGGGGG+AGG | + | chr5_1:15693824-15693843 | None:intergenic | 35.0% | |
! | AAAGCCTACTTCTAAAGGTA+TGG | + | chr5_1:15693947-15693966 | None:intergenic | 35.0% |
GCTCTTCCATTTGAATGAAA+AGG | + | chr5_1:15694115-15694134 | None:intergenic | 35.0% | |
ATGTTGCCAACGTTAGAAAT+TGG | + | chr5_1:15694152-15694171 | None:intergenic | 35.0% | |
GCAAGCATTTGAATGAAAAG+GGG | + | chr5_1:15694176-15694195 | None:intergenic | 35.0% | |
!! | AATGCTTGCTTTTACGTTGT+AGG | - | chr5_1:15694187-15694206 | Msa0719980:intron | 35.0% |
TACTATCTTCGCTCTTTCTA+GGG | + | chr5_1:15694257-15694276 | None:intergenic | 35.0% | |
TTACTATCTTCGCTCTTTCT+AGG | + | chr5_1:15694258-15694277 | None:intergenic | 35.0% | |
CCAACCTTAGAATTTGGTAA+TGG | + | chr5_1:15694315-15694334 | None:intergenic | 35.0% | |
!! | CCATTACCAAATTCTAAGGT+TGG | - | chr5_1:15694312-15694331 | Msa0719980:intron | 35.0% |
CAGATACCAACCTTAGAATT+TGG | + | chr5_1:15694321-15694340 | None:intergenic | 35.0% | |
!! | AAAAGTTAGTCTTCTTCAGG+TGG | - | chr5_1:15694400-15694419 | Msa0719980:intron | 35.0% |
TGAAAACAATCAAACGAGAC+GGG | + | chr5_1:15694544-15694563 | None:intergenic | 35.0% | |
GTCTTCAGATCAGTTTCATT+AGG | - | chr5_1:15694575-15694594 | Msa0719980:intron | 35.0% | |
CGCAGAATTGCAATTAAGTT+CGG | + | chr5_1:15694611-15694630 | None:intergenic | 35.0% | |
GAACCTTACACTGGTAAATT+TGG | + | chr5_1:15694653-15694672 | None:intergenic | 35.0% | |
AATTCCAGGCAAATTTGTGA+CGG | + | chr5_1:15694679-15694698 | None:intergenic | 35.0% | |
!! | ATCTAGCATTGACAAATTCC+AGG | + | chr5_1:15694693-15694712 | None:intergenic | 35.0% |
CAAGGTTGACATTTCATGAA+AGG | + | chr5_1:15694813-15694832 | None:intergenic | 35.0% | |
TCAACCTTGATTCCGATTTA+TGG | - | chr5_1:15694824-15694843 | Msa0719980:intron | 35.0% | |
CAACCTTGATTCCGATTTAT+GGG | - | chr5_1:15694825-15694844 | Msa0719980:intron | 35.0% | |
GATTCAAAGTCAACCTCATT+AGG | + | chr5_1:15695235-15695254 | None:intergenic | 35.0% | |
CGATGCATTGAAGTCTTAAT+TGG | + | chr5_1:15695446-15695465 | None:intergenic | 35.0% | |
GGAGTGGATCACAAATAATT+TGG | - | chr5_1:15695660-15695679 | Msa0719980:intron | 35.0% | |
! | CATATGATCGATCTAAGATG+TGG | + | chr5_1:15695811-15695830 | None:intergenic | 35.0% |
CTTAAATAGAGGGTTAGACA+TGG | + | chr5_1:15695984-15696003 | None:intergenic | 35.0% | |
! | CCACCTATTTTCAGTGAAAA+AGG | + | chr5_1:15696040-15696059 | None:intergenic | 35.0% |
!! | CCTTTTTCACTGAAAATAGG+TGG | - | chr5_1:15696037-15696056 | Msa0719980:intron | 35.0% |
TCTACTGTATGTATGAGACA+AGG | + | chr5_1:15696132-15696151 | None:intergenic | 35.0% | |
ATACAGTAGAGTCAAGTACA+TGG | - | chr5_1:15696142-15696161 | Msa0719980:intron | 35.0% | |
ATGGATAATTCATCACGGAT+GGG | - | chr5_1:15696161-15696180 | Msa0719980:intron | 35.0% | |
GCATGGAAATATCACAGAAT+TGG | + | chr5_1:15696468-15696487 | None:intergenic | 35.0% | |
TGAATTTCCATGCTTATACG+AGG | - | chr5_1:15696494-15696513 | Msa0719980:intron | 35.0% | |
TCCACTGAAGAAGAATCAAA+GGG | + | chr5_1:15696530-15696549 | None:intergenic | 35.0% | |
! | GCAGGTTGAAAAAGAAATTG+GGG | - | chr5_1:15696717-15696736 | Msa0719980:intron | 35.0% |
GTGAAAATCCTGAAAAGGTA+AGG | - | chr5_1:15696818-15696837 | Msa0719980:intron | 35.0% | |
! | CATATTCTCCTTACCTTTTC+AGG | + | chr5_1:15696829-15696848 | None:intergenic | 35.0% |
TAAGTCACCTATTGTCATTC+TGG | - | chr5_1:15696924-15696943 | Msa0719980:intron | 35.0% | |
AAGGATACCAGAATGACAAT+AGG | + | chr5_1:15696934-15696953 | None:intergenic | 35.0% | |
AGCTATTAGGACTATTAAGG+AGG | - | chr5_1:15697076-15697095 | Msa0719980:CDS | 35.0% | |
GCTATTAGGACTATTAAGGA+GGG | - | chr5_1:15697077-15697096 | Msa0719980:CDS | 35.0% | |
GTGCCTTTGAATGAGAAATT+TGG | - | chr5_1:15697112-15697131 | Msa0719980:intron | 35.0% | |
TAATACTCAGTTTCGGTAGA+GGG | + | chr5_1:15697180-15697199 | None:intergenic | 35.0% | |
TTAATACTCAGTTTCGGTAG+AGG | + | chr5_1:15697181-15697200 | None:intergenic | 35.0% | |
AGATCATTAACTACAGAGGT+GGG | + | chr5_1:15697270-15697289 | None:intergenic | 35.0% | |
TAGATCATTAACTACAGAGG+TGG | + | chr5_1:15697271-15697290 | None:intergenic | 35.0% | |
GACTAATCAATATGATGTGC+TGG | - | chr5_1:15697514-15697533 | Msa0719980:intron | 35.0% | |
!!! | TACACTTTTCACCGATTTTC+AGG | - | chr5_1:15697633-15697652 | Msa0719980:intron | 35.0% |
AATCTCTGATGTGAATCAGT+TGG | + | chr5_1:15697934-15697953 | None:intergenic | 35.0% | |
TTTGGTCTCTTATCAGTCAA+TGG | + | chr5_1:15698112-15698131 | None:intergenic | 35.0% | |
! | AGAAGAATATGAGGCTCTAG+GGG | + | chr5_1:15690364-15690383 | None:intergenic | 40.0% |
GAAGAAGAATATGAGGCTCT+AGG | + | chr5_1:15690366-15690385 | None:intergenic | 40.0% | |
GAAGAAGAAGAACTACGAAG+AGG | + | chr5_1:15690402-15690421 | None:intergenic | 40.0% | |
GTAGTTGCATTAGATCGAAG+AGG | + | chr5_1:15690435-15690454 | None:intergenic | 40.0% | |
!! | CTTGTTCATTTCTGGCATTG+AGG | + | chr5_1:15690599-15690618 | None:intergenic | 40.0% |
CTCAATGCCAGAAATGAACA+AGG | - | chr5_1:15690597-15690616 | Msa0719980:three_prime_UTR | 40.0% | |
ATATGTGTGATGTCGCTGTT+TGG | - | chr5_1:15691104-15691123 | Msa0719980:intron | 40.0% | |
AAGGCTCTCTCTTTGCTTTA+TGG | + | chr5_1:15692242-15692261 | None:intergenic | 40.0% | |
! | ATCCTATGGGTTATGGAGAA+TGG | + | chr5_1:15692519-15692538 | None:intergenic | 40.0% |
! | ACAGGATACAGCATTTTCAC+AGG | + | chr5_1:15692659-15692678 | None:intergenic | 40.0% |
CTGTATCCTGTATGAATCCT+GGG | - | chr5_1:15692668-15692687 | Msa0719980:intron | 40.0% | |
AGATTCAATCTGATGCACTG+TGG | + | chr5_1:15692771-15692790 | None:intergenic | 40.0% | |
ACTCACATTTACGCTTAAGG+AGG | - | chr5_1:15692798-15692817 | Msa0719980:intron | 40.0% | |
AAGGGAGGGCTTGAAAAAAA+AGG | - | chr5_1:15693063-15693082 | Msa0719980:intron | 40.0% | |
! | AAAGAATGGAGAGCTTTGTG+AGG | - | chr5_1:15693099-15693118 | Msa0719980:intron | 40.0% |
! | AAGAATGGAGAGCTTTGTGA+GGG | - | chr5_1:15693100-15693119 | Msa0719980:intron | 40.0% |
TACGAAATCCCCCTAATTTG+GGG | - | chr5_1:15693155-15693174 | Msa0719980:intron | 40.0% | |
TTGTAGTTCCCCCAAATTAG+GGG | + | chr5_1:15693167-15693186 | None:intergenic | 40.0% | |
! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr5_1:15693188-15693207 | Msa0719980:CDS | 40.0% |
! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr5_1:15693189-15693208 | Msa0719980:CDS | 40.0% |
TTTCGAGGGATGAGATTAGA+GGG | + | chr5_1:15693341-15693360 | None:intergenic | 40.0% | |
!!! | GGCTTTGTTTAGGATTTTGG+AGG | + | chr5_1:15693371-15693390 | None:intergenic | 40.0% |
!! | GAGAGTCTTAGGCTTTGTTT+AGG | + | chr5_1:15693381-15693400 | None:intergenic | 40.0% |
TGTAGGGAGTTTGACAAAAC+AGG | + | chr5_1:15693429-15693448 | None:intergenic | 40.0% | |
AAGGCTGGCAATATGATGTA+GGG | + | chr5_1:15693445-15693464 | None:intergenic | 40.0% | |
TCATAGGACAATGGAGAAGA+GGG | + | chr5_1:15693481-15693500 | None:intergenic | 40.0% | |
GGGTCTAATGAATAAACACG+TGG | + | chr5_1:15693504-15693523 | None:intergenic | 40.0% | |
TTCATTAGACCCTGCAATAG+GGG | - | chr5_1:15693512-15693531 | Msa0719980:intron | 40.0% | |
GCTTAGTTGAAAGTTGCTCA+TGG | - | chr5_1:15693569-15693588 | Msa0719980:CDS | 40.0% | |
! | GTTTTCTTTGTGCCCTCAAA+TGG | - | chr5_1:15693695-15693714 | Msa0719980:intron | 40.0% |
AAAAAAAAAAACGGGGGGAG+GGG | + | chr5_1:15693822-15693841 | None:intergenic | 40.0% | |
! | GGAACCATACCTTTAGAAGT+AGG | - | chr5_1:15693940-15693959 | Msa0719980:intron | 40.0% |
AGCACAAAGCCTACTTCTAA+AGG | + | chr5_1:15693952-15693971 | None:intergenic | 40.0% | |
AACTGGCATGCATATGAAAG+GGG | + | chr5_1:15694017-15694036 | None:intergenic | 40.0% | |
GAACTGGCATGCATATGAAA+GGG | + | chr5_1:15694018-15694037 | None:intergenic | 40.0% | |
!! | AGATATGAGGTGCTGTAAGA+TGG | + | chr5_1:15694040-15694059 | None:intergenic | 40.0% |
! | CATGCCCCTTTTCATTCAAA+TGG | - | chr5_1:15694106-15694125 | Msa0719980:intron | 40.0% |
ACTATCTTCGCTCTTTCTAG+GGG | + | chr5_1:15694256-15694275 | None:intergenic | 40.0% | |
AATCAAACGAGACGGGATTT+CGG | + | chr5_1:15694537-15694556 | None:intergenic | 40.0% | |
ATTCCAGGCAAATTTGTGAC+GGG | + | chr5_1:15694678-15694697 | None:intergenic | 40.0% | |
GAACCCATAAATCGGAATCA+AGG | + | chr5_1:15694831-15694850 | None:intergenic | 40.0% | |
AGCAGCAATGCAATAATAGC+TGG | + | chr5_1:15694975-15694994 | None:intergenic | 40.0% | |
TCCACATATTGCTGAGAACT+TGG | - | chr5_1:15695007-15695026 | Msa0719980:intron | 40.0% | |
ACCAAGTTCTCAGCAATATG+TGG | + | chr5_1:15695011-15695030 | None:intergenic | 40.0% | |
GTTCTACAGATTTATGTGGC+AGG | - | chr5_1:15695111-15695130 | Msa0719980:intron | 40.0% | |
TGCTGGCATATTTCCTAATG+AGG | - | chr5_1:15695219-15695238 | Msa0719980:intron | 40.0% | |
! | CTTTTCATCTCTACAAGTGC+TGG | + | chr5_1:15695329-15695348 | None:intergenic | 40.0% |
AGCAAATACACGAAGTCTGA+AGG | - | chr5_1:15695352-15695371 | Msa0719980:intron | 40.0% | |
TACACGAAGTCTGAAGGAAA+TGG | - | chr5_1:15695358-15695377 | Msa0719980:intron | 40.0% | |
ATGCACATACCTTAAAAGCG+TGG | + | chr5_1:15695384-15695403 | None:intergenic | 40.0% | |
ATAATTTGGATTGCCCCAAG+CGG | - | chr5_1:15695674-15695693 | Msa0719980:intron | 40.0% | |
GCATAACCAGTTGTTTGCAA+AGG | - | chr5_1:15696003-15696022 | Msa0719980:intron | 40.0% | |
AAGCAACCTTTGCAAACAAC+TGG | + | chr5_1:15696012-15696031 | None:intergenic | 40.0% | |
CATGGATAATTCATCACGGA+TGG | - | chr5_1:15696160-15696179 | Msa0719980:intron | 40.0% | |
CTAAGTGCATAACATCCTCT+CGG | - | chr5_1:15696432-15696451 | Msa0719980:intron | 40.0% | |
ACCCTTTGATTCTTCTTCAG+TGG | - | chr5_1:15696526-15696545 | Msa0719980:CDS | 40.0% | |
GTCCACTGAAGAAGAATCAA+AGG | + | chr5_1:15696531-15696550 | None:intergenic | 40.0% | |
ATAGGATAGATATGACCTGG+TGG | + | chr5_1:15696584-15696603 | None:intergenic | 40.0% | |
ACCAGGTCATATCTATCCTA+TGG | - | chr5_1:15696583-15696602 | Msa0719980:CDS | 40.0% | |
TCATGGCACAATATTGCCAT+AGG | + | chr5_1:15696602-15696621 | None:intergenic | 40.0% | |
AAGGAACACCATACCTTAAG+TGG | + | chr5_1:15696638-15696657 | None:intergenic | 40.0% | |
! | TTGACACCGTGTAATTTTGC+AGG | - | chr5_1:15696699-15696718 | Msa0719980:intron | 40.0% |
GTGTCGGAAAAGCTTATTTC+TGG | + | chr5_1:15696787-15696806 | None:intergenic | 40.0% | |
! | AGGATTTTCACAAGAAGCAG+TGG | + | chr5_1:15696809-15696828 | None:intergenic | 40.0% |
CAGCCATACTTCTTACTACA+AGG | + | chr5_1:15696953-15696972 | None:intergenic | 40.0% | |
! | TTCTCATTCAAAGGCACACA+GGG | + | chr5_1:15697109-15697128 | None:intergenic | 40.0% |
! | TTTCTCATTCAAAGGCACAC+AGG | + | chr5_1:15697110-15697129 | None:intergenic | 40.0% |
CAGTACCAAATGTGAACCTT+TGG | - | chr5_1:15697153-15697172 | Msa0719980:intron | 40.0% | |
ACCCAAGGATACTGAATACT+GGG | + | chr5_1:15697304-15697323 | None:intergenic | 40.0% | |
AAGTTTGAGCATATGACCCA+AGG | + | chr5_1:15697319-15697338 | None:intergenic | 40.0% | |
ATTGGAACATGGGTTCTGTA+TGG | - | chr5_1:15697448-15697467 | Msa0719980:intron | 40.0% | |
!!! | CAATCCTTTTTTGCCGTGTA+TGG | + | chr5_1:15697546-15697565 | None:intergenic | 40.0% |
CATACACGGCAAAAAAGGAT+TGG | - | chr5_1:15697544-15697563 | Msa0719980:intron | 40.0% | |
TCAAATCCGAACTACTTCCA+TGG | + | chr5_1:15697602-15697621 | None:intergenic | 40.0% | |
! | GCTTGAATTTTCATGGCTGA+AGG | - | chr5_1:15697852-15697871 | Msa0719980:intron | 40.0% |
! | ACTGTCTTTTACTGCATCCA+AGG | - | chr5_1:15697954-15697973 | Msa0719980:CDS | 40.0% |
! | CTGTCTTTTACTGCATCCAA+GGG | - | chr5_1:15697955-15697974 | Msa0719980:CDS | 40.0% |
TCTCTTATCAGTCAATGGAC+TGG | + | chr5_1:15698107-15698126 | None:intergenic | 40.0% | |
TTTGACCTCTGCTTATACTG+TGG | + | chr5_1:15698299-15698318 | None:intergenic | 40.0% | |
AGCAGAGGTCAAAATGCAAT+TGG | - | chr5_1:15698306-15698325 | Msa0719980:exon | 40.0% | |
GCGGTTGAAGGAGAAGAAAA+TGG | + | chr5_1:15690330-15690349 | None:intergenic | 45.0% | |
GGAGAGAAAAATGCGGTTGA+AGG | + | chr5_1:15690342-15690361 | None:intergenic | 45.0% | |
TCTAGGGGGAGAGAAAAATG+CGG | + | chr5_1:15690349-15690368 | None:intergenic | 45.0% | |
!! | GAAGAATATGAGGCTCTAGG+GGG | + | chr5_1:15690363-15690382 | None:intergenic | 45.0% |
GTTTGGTTAGACTGTTTGGG+AGG | - | chr5_1:15690890-15690909 | Msa0719980:intron | 45.0% | |
CTGTTTGGGAGGATAACTTG+TGG | - | chr5_1:15690901-15690920 | Msa0719980:intron | 45.0% | |
CACATATAGCTGGCCATGTT+TGG | + | chr5_1:15691091-15691110 | None:intergenic | 45.0% | |
AGCGACATCACACATATAGC+TGG | + | chr5_1:15691101-15691120 | None:intergenic | 45.0% | |
! | AATAGTGGGAGGCAAAGTTC+CGG | + | chr5_1:15691476-15691495 | None:intergenic | 45.0% |
TCCATCCCTTCAGCAATAGT+GGG | + | chr5_1:15691490-15691509 | None:intergenic | 45.0% | |
TTCCATCCCTTCAGCAATAG+TGG | + | chr5_1:15691491-15691510 | None:intergenic | 45.0% | |
TAGTTCGTTAATTTCCGGGC+TGG | - | chr5_1:15691747-15691766 | Msa0719980:CDS | 45.0% | |
GTCCATTCTCCATAACCCAT+AGG | - | chr5_1:15692514-15692533 | Msa0719980:intron | 45.0% | |
! | AGCACGTTGGTTGAAGCTAA+TGG | - | chr5_1:15692549-15692568 | Msa0719980:CDS | 45.0% |
GTATTTGAGCGACACAAGAC+AGG | + | chr5_1:15692630-15692649 | None:intergenic | 45.0% | |
GCTGTATCCTGTATGAATCC+TGG | - | chr5_1:15692667-15692686 | Msa0719980:intron | 45.0% | |
AGAATGCCCAGGATTCATAC+AGG | + | chr5_1:15692677-15692696 | None:intergenic | 45.0% | |
AGTTTATACGCACCCACAGA+TGG | - | chr5_1:15692957-15692976 | Msa0719980:intron | 45.0% | |
AAACTCCCAAACAGAGCCTT+AGG | + | chr5_1:15693031-15693050 | None:intergenic | 45.0% | |
TAAGGCTCTGTTTGGGAGTT+TGG | - | chr5_1:15693030-15693049 | Msa0719980:intron | 45.0% | |
! | AGAATGGAGAGCTTTGTGAG+GGG | - | chr5_1:15693101-15693120 | Msa0719980:intron | 45.0% |
ACGAAATCCCCCTAATTTGG+GGG | - | chr5_1:15693156-15693175 | Msa0719980:intron | 45.0% | |
TGTAGTTCCCCCAAATTAGG+GGG | + | chr5_1:15693166-15693185 | None:intergenic | 45.0% | |
CTTTCGAGGGATGAGATTAG+AGG | + | chr5_1:15693342-15693361 | None:intergenic | 45.0% | |
!! | GTTTAGGATTTTGGAGGGGA+GGG | + | chr5_1:15693365-15693384 | None:intergenic | 45.0% |
!! | TGTTTAGGATTTTGGAGGGG+AGG | + | chr5_1:15693366-15693385 | None:intergenic | 45.0% |
GAAGGCTGGCAATATGATGT+AGG | + | chr5_1:15693446-15693465 | None:intergenic | 45.0% | |
GTCATAGGACAATGGAGAAG+AGG | + | chr5_1:15693482-15693501 | None:intergenic | 45.0% | |
AACACGTGGTCATAGGACAA+TGG | + | chr5_1:15693490-15693509 | None:intergenic | 45.0% | |
AGTTGCTCATGGCAAACCAT+AGG | - | chr5_1:15693580-15693599 | Msa0719980:CDS | 45.0% | |
! | TGAGGGCACAAAGAAAACTG+AGG | + | chr5_1:15693693-15693712 | None:intergenic | 45.0% |
GGAACTGGCATGCATATGAA+AGG | + | chr5_1:15694019-15694038 | None:intergenic | 45.0% | |
TTGTGCAGCACTTCTTACGT+TGG | - | chr5_1:15694080-15694099 | Msa0719980:intron | 45.0% | |
AATGGAAGAGCAGCTTAAGC+AGG | - | chr5_1:15694124-15694143 | Msa0719980:intron | 45.0% | |
CAGGTGCCAATTTCTAACGT+TGG | - | chr5_1:15694143-15694162 | Msa0719980:intron | 45.0% | |
! | TATCTTCGCTCTTTCTAGGG+GGG | + | chr5_1:15694254-15694273 | None:intergenic | 45.0% |
CTATCTTCGCTCTTTCTAGG+GGG | + | chr5_1:15694255-15694274 | None:intergenic | 45.0% | |
!! | AGTTAGTCTTCTTCAGGTGG+TGG | - | chr5_1:15694403-15694422 | Msa0719980:intron | 45.0% |
TAGCTGGATCAGCTTCACTT+TGG | + | chr5_1:15694959-15694978 | None:intergenic | 45.0% | |
ATACTGAAGGGCTTGCATAG+AGG | + | chr5_1:15695156-15695175 | None:intergenic | 45.0% | |
CTATGCAAGCCCTTCAGTAT+TGG | - | chr5_1:15695156-15695175 | Msa0719980:intron | 45.0% | |
! | AGGAAATGGCCACGCTTTTA+AGG | - | chr5_1:15695372-15695391 | Msa0719980:intron | 45.0% |
ATAATTCATCACGGATGGGC+TGG | - | chr5_1:15696165-15696184 | Msa0719980:intron | 45.0% | |
CTACAAATGAAGTCCCGGTT+TGG | - | chr5_1:15696197-15696216 | Msa0719980:intron | 45.0% | |
ACTCCACATTTGAGCCAAAC+CGG | + | chr5_1:15696214-15696233 | None:intergenic | 45.0% | |
CGAGAGGATGTTATGCACTT+AGG | + | chr5_1:15696434-15696453 | None:intergenic | 45.0% | |
ATTGGTTGTATTGCACCGAG+AGG | + | chr5_1:15696450-15696469 | None:intergenic | 45.0% | |
CTGAATGCCTCGTATAAGCA+TGG | + | chr5_1:15696504-15696523 | None:intergenic | 45.0% | |
! | CATGCTTATACGAGGCATTC+AGG | - | chr5_1:15696502-15696521 | Msa0719980:intron | 45.0% |
CTTCAGTGGACAATATGCGA+AGG | - | chr5_1:15696540-15696559 | Msa0719980:CDS | 45.0% | |
GCCATAGGATAGATATGACC+TGG | + | chr5_1:15696587-15696606 | None:intergenic | 45.0% | |
CATAATGCCTCCTCCACTTA+AGG | - | chr5_1:15696622-15696641 | Msa0719980:intron | 45.0% | |
GAACACCATACCTTAAGTGG+AGG | + | chr5_1:15696635-15696654 | None:intergenic | 45.0% | |
! | GTGTTCCTTCCTTTGAGAGT+TGG | - | chr5_1:15696649-15696668 | Msa0719980:intron | 45.0% |
ATATCAGGGCCAACTCTCAA+AGG | + | chr5_1:15696661-15696680 | None:intergenic | 45.0% | |
TTCACAAGAAGCAGTGGTGT+CGG | + | chr5_1:15696803-15696822 | None:intergenic | 45.0% | |
TCGAGCTACGTAGCATTCTT+AGG | + | chr5_1:15696976-15696995 | None:intergenic | 45.0% | |
! | TCTCATTCAAAGGCACACAG+GGG | + | chr5_1:15697108-15697127 | None:intergenic | 45.0% |
AGGGTCCAAAGGTTCACATT+TGG | + | chr5_1:15697161-15697180 | None:intergenic | 45.0% | |
AGCCCAGTATTCAGTATCCT+TGG | - | chr5_1:15697299-15697318 | Msa0719980:intron | 45.0% | |
GCCCAGTATTCAGTATCCTT+GGG | - | chr5_1:15697300-15697319 | Msa0719980:intron | 45.0% | |
GACCCAAGGATACTGAATAC+TGG | + | chr5_1:15697305-15697324 | None:intergenic | 45.0% | |
TCTGCCATACACGGCAAAAA+AGG | - | chr5_1:15697539-15697558 | Msa0719980:intron | 45.0% | |
ACAGACGCGTCTTGTAGATT+AGG | - | chr5_1:15697699-15697718 | Msa0719980:intron | 45.0% | |
GATGTGGTAAGGAACTAGGA+GGG | + | chr5_1:15698085-15698104 | None:intergenic | 45.0% | |
ACTGGATGTGGTAAGGAACT+AGG | + | chr5_1:15698089-15698108 | None:intergenic | 45.0% | |
!! | TCAATGGACTGGATGTGGTA+AGG | + | chr5_1:15698096-15698115 | None:intergenic | 45.0% |
!! | ATCAGTCAATGGACTGGATG+TGG | + | chr5_1:15698101-15698120 | None:intergenic | 45.0% |
!! | AATAAATAATAACATTTAAT+TGG | - | chr5_1:15691252-15691271 | Msa0719980:intron | 5.0% |
!!! | TTTTCAAAAAAAAAAAAAAA+CGG | + | chr5_1:15693831-15693850 | None:intergenic | 5.0% |
!! | ATACAAAAAAAAAAAAAAAT+TGG | + | chr5_1:15698145-15698164 | None:intergenic | 5.0% |
! | TCGCGTGTCGATAATTCGCT+CGG | - | chr5_1:15690657-15690676 | Msa0719980:intron | 50.0% |
TTGCCTCCCACTATTGCTGA+AGG | - | chr5_1:15691481-15691500 | Msa0719980:intron | 50.0% | |
TGCCTCCCACTATTGCTGAA+GGG | - | chr5_1:15691482-15691501 | Msa0719980:intron | 50.0% | |
! | ATCCCTTCAGCAATAGTGGG+AGG | + | chr5_1:15691487-15691506 | None:intergenic | 50.0% |
TCCCACTATTGCTGAAGGGA+TGG | - | chr5_1:15691486-15691505 | Msa0719980:intron | 50.0% | |
AAACAGAGCCTTAGGCTCTG+AGG | + | chr5_1:15693023-15693042 | None:intergenic | 50.0% | |
TCAGAGCCTAAGGCTCTGTT+TGG | - | chr5_1:15693022-15693041 | Msa0719980:intron | 50.0% | |
CAGAGCCTAAGGCTCTGTTT+GGG | - | chr5_1:15693023-15693042 | Msa0719980:intron | 50.0% | |
GCTCTGTTTGGGAGTTTGGA+GGG | - | chr5_1:15693034-15693053 | Msa0719980:intron | 50.0% | |
CTCTGTTTGGGAGTTTGGAG+GGG | - | chr5_1:15693035-15693054 | Msa0719980:intron | 50.0% | |
GACAATGGAGAAGAGGGTGA+TGG | + | chr5_1:15693475-15693494 | None:intergenic | 50.0% | |
TGATGAGCACCCCTATTGCA+GGG | + | chr5_1:15693524-15693543 | None:intergenic | 50.0% | |
!! | GAGGTGCTGTAAGATGGAAC+TGG | + | chr5_1:15694034-15694053 | None:intergenic | 50.0% |
TGACGGGAAGAACCTTACAC+TGG | + | chr5_1:15694662-15694681 | None:intergenic | 50.0% | |
CTTCCCGTCACAAATTTGCC+TGG | - | chr5_1:15694672-15694691 | Msa0719980:intron | 50.0% | |
CTGGATCAGCTTCACTTTGG+TGG | + | chr5_1:15694956-15694975 | None:intergenic | 50.0% | |
GAAGGGCTTGCATAGAGGAT+CGG | + | chr5_1:15695151-15695170 | None:intergenic | 50.0% | |
ATCGACCAGTTGCCAACTCT+GGG | - | chr5_1:15695705-15695724 | Msa0719980:intron | 50.0% | |
!! | AGTTGCCAACTCTGGGGTAT+GGG | - | chr5_1:15695712-15695731 | Msa0719980:intron | 50.0% |
AACATCATGAGCTCGACTGC+TGG | + | chr5_1:15695890-15695909 | None:intergenic | 50.0% | |
CTCCACATTTGAGCCAAACC+GGG | + | chr5_1:15696213-15696232 | None:intergenic | 50.0% | |
CGAAGGCTTGTCGATCATTC+AGG | - | chr5_1:15696557-15696576 | Msa0719980:CDS | 50.0% | |
!! | GTGGAGGAGGCATTATGTCA+TGG | + | chr5_1:15696619-15696638 | None:intergenic | 50.0% |
TGCCTCCTCCACTTAAGGTA+TGG | - | chr5_1:15696627-15696646 | Msa0719980:intron | 50.0% | |
CACCATACCTTAAGTGGAGG+AGG | + | chr5_1:15696632-15696651 | None:intergenic | 50.0% | |
AGTTTCGGTAGAGGGTCCAA+AGG | + | chr5_1:15697172-15697191 | None:intergenic | 50.0% | |
ACATGGGTTCTGTATGGTGC+AGG | - | chr5_1:15697454-15697473 | Msa0719980:intron | 50.0% | |
TCGCAGCCATGGAAGTAGTT+CGG | - | chr5_1:15697593-15697612 | Msa0719980:intron | 50.0% | |
GGAAATTTCCATCGAGCCCT+TGG | + | chr5_1:15697974-15697993 | None:intergenic | 50.0% | |
GGATGTGGTAAGGAACTAGG+AGG | + | chr5_1:15698086-15698105 | None:intergenic | 50.0% | |
ACGTGCCACAGTATAAGCAG+AGG | - | chr5_1:15698291-15698310 | Msa0719980:CDS | 50.0% | |
!! | CGTTAATTTCCGGGCTGGCT+TGG | - | chr5_1:15691752-15691771 | Msa0719980:CDS | 55.0% |
! | CTCTGGAAGGTAGAATGCCC+AGG | + | chr5_1:15692688-15692707 | None:intergenic | 55.0% |
CTACCTTGCCTCAGAGCCTA+AGG | - | chr5_1:15693012-15693031 | Msa0719980:intron | 55.0% | |
GGCTCTGTTTGGGAGTTTGG+AGG | - | chr5_1:15693033-15693052 | Msa0719980:intron | 55.0% | |
TGTTTGGGAGTTTGGAGGGG+AGG | - | chr5_1:15693038-15693057 | Msa0719980:intron | 55.0% | |
GTTTGGGAGTTTGGAGGGGA+GGG | - | chr5_1:15693039-15693058 | Msa0719980:intron | 55.0% | |
TTTGGGAGTTTGGAGGGGAG+GGG | - | chr5_1:15693040-15693059 | Msa0719980:intron | 55.0% | |
! | ATGGAGAGCTTTGTGAGGGG+AGG | - | chr5_1:15693104-15693123 | Msa0719980:intron | 55.0% |
! | TGGAGAGCTTTGTGAGGGGA+GGG | - | chr5_1:15693105-15693124 | Msa0719980:intron | 55.0% |
TTTGTGAGGGGAGGGCTTTG+AGG | - | chr5_1:15693113-15693132 | Msa0719980:intron | 55.0% | |
! | TTGTGAGGGGAGGGCTTTGA+GGG | - | chr5_1:15693114-15693133 | Msa0719980:intron | 55.0% |
!! | GAGAAGAGGGTGATGGAAGC+GGG | + | chr5_1:15693468-15693487 | None:intergenic | 55.0% |
!! | GGAGAAGAGGGTGATGGAAG+CGG | + | chr5_1:15693469-15693488 | None:intergenic | 55.0% |
CTGATGAGCACCCCTATTGC+AGG | + | chr5_1:15693525-15693544 | None:intergenic | 55.0% | |
AAAAAAACGGGGGGAGGGGA+GGG | + | chr5_1:15693818-15693837 | None:intergenic | 55.0% | |
AAAAAAAACGGGGGGAGGGG+AGG | + | chr5_1:15693819-15693838 | None:intergenic | 55.0% | |
! | CGCTCTTTCTAGGGGGGAAA+AGG | + | chr5_1:15694248-15694267 | None:intergenic | 55.0% |
!! | GCAAGCCCTTCAGTATTGGC+AGG | - | chr5_1:15695160-15695179 | Msa0719980:intron | 55.0% |
ATTTGGATTGCCCCAAGCGG+TGG | - | chr5_1:15695677-15695696 | Msa0719980:intron | 55.0% | |
GATCGACCAGTTGCCAACTC+TGG | - | chr5_1:15695704-15695723 | Msa0719980:intron | 55.0% | |
TCGACCAGTTGCCAACTCTG+GGG | - | chr5_1:15695706-15695725 | Msa0719980:intron | 55.0% | |
CATACCCCAGAGTTGGCAAC+TGG | + | chr5_1:15695713-15695732 | None:intergenic | 55.0% | |
!! | CAGTTGCCAACTCTGGGGTA+TGG | - | chr5_1:15695711-15695730 | Msa0719980:intron | 55.0% |
!! | TCATCACGGATGGGCTGGTT+AGG | - | chr5_1:15696170-15696189 | Msa0719980:intron | 55.0% |
!! | CATCACGGATGGGCTGGTTA+GGG | - | chr5_1:15696171-15696190 | Msa0719980:intron | 55.0% |
!! | ATCACGGATGGGCTGGTTAG+GGG | - | chr5_1:15696172-15696191 | Msa0719980:intron | 55.0% |
GGGGGCTACAAATGAAGTCC+CGG | - | chr5_1:15696192-15696211 | Msa0719980:intron | 55.0% | |
!! | GTCCCGGTTTGGCTCAAATG+TGG | - | chr5_1:15696208-15696227 | Msa0719980:intron | 55.0% |
GTCGATCATTCAGGTCCACC+AGG | - | chr5_1:15696566-15696585 | Msa0719980:CDS | 55.0% | |
CAGGGCCAACTCTCAAAGGA+AGG | + | chr5_1:15696657-15696676 | None:intergenic | 55.0% | |
! | CATTCAAAGGCACACAGGGG+AGG | + | chr5_1:15697105-15697124 | None:intergenic | 55.0% |
GTGCTGGAGTCTGCCATACA+CGG | - | chr5_1:15697530-15697549 | Msa0719980:intron | 55.0% | |
TGGCTGCGACAAGGAAACTG+CGG | + | chr5_1:15697582-15697601 | None:intergenic | 55.0% | |
CAGTTTCCTTGTCGCAGCCA+TGG | - | chr5_1:15697582-15697601 | Msa0719980:intron | 55.0% | |
CTACTTCCATGGCTGCGACA+AGG | + | chr5_1:15697591-15697610 | None:intergenic | 55.0% | |
TACTGCATCCAAGGGCTCGA+TGG | - | chr5_1:15697963-15697982 | Msa0719980:CDS | 55.0% | |
!! | TTTCCGGGCTGGCTTGGAGT+TGG | - | chr5_1:15691758-15691777 | Msa0719980:CDS | 60.0% |
ACACCAACTCCAAGCCAGCC+CGG | + | chr5_1:15691764-15691783 | None:intergenic | 60.0% | |
!! | GAGCCTTAGGCTCTGAGGCA+AGG | + | chr5_1:15693018-15693037 | None:intergenic | 60.0% |
GAGTTTGGAGGGGAGGGGAA+GGG | - | chr5_1:15693045-15693064 | Msa0719980:intron | 60.0% | |
!! | TGTGAGGGGAGGGCTTTGAG+GGG | - | chr5_1:15693115-15693134 | Msa0719980:intron | 60.0% |
TTGGAGGGGAGGGCTTTCGA+GGG | + | chr5_1:15693355-15693374 | None:intergenic | 60.0% | |
TTTGGAGGGGAGGGCTTTCG+AGG | + | chr5_1:15693356-15693375 | None:intergenic | 60.0% | |
!! | AGAGGGTGATGGAAGCGGGA+AGG | + | chr5_1:15693464-15693483 | None:intergenic | 60.0% |
AAAAAACGGGGGGAGGGGAG+GGG | + | chr5_1:15693817-15693836 | None:intergenic | 60.0% | |
GATTGCCCCAAGCGGTGGTA+GGG | - | chr5_1:15695682-15695701 | Msa0719980:intron | 60.0% | |
TCGATCCCTACCACCGCTTG+GGG | + | chr5_1:15695690-15695709 | None:intergenic | 60.0% | |
GTCGATCCCTACCACCGCTT+GGG | + | chr5_1:15695691-15695710 | None:intergenic | 60.0% | |
!! | CAACTCTGGGGTATGGGCAC+CGG | - | chr5_1:15695718-15695737 | Msa0719980:intron | 60.0% |
CGACTGCTGGAGTACGCTTC+TGG | + | chr5_1:15695877-15695896 | None:intergenic | 60.0% | |
!! | TCACGGATGGGCTGGTTAGG+GGG | - | chr5_1:15696173-15696192 | Msa0719980:intron | 60.0% |
GGCTGCGACAAGGAAACTGC+GGG | + | chr5_1:15697581-15697600 | None:intergenic | 60.0% | |
GGAGTTTGGAGGGGAGGGGA+AGG | - | chr5_1:15693044-15693063 | Msa0719980:intron | 65.0% | |
TTTGGAGGGGAGGGGAAGGG+AGG | - | chr5_1:15693048-15693067 | Msa0719980:intron | 65.0% | |
TTGGAGGGGAGGGGAAGGGA+GGG | - | chr5_1:15693049-15693068 | Msa0719980:intron | 65.0% | |
!! | GGTGATGGAAGCGGGAAGGC+TGG | + | chr5_1:15693460-15693479 | None:intergenic | 65.0% |
AAAAACGGGGGGAGGGGAGG+GGG | + | chr5_1:15693816-15693835 | None:intergenic | 65.0% | |
GGATTGCCCCAAGCGGTGGT+AGG | - | chr5_1:15695681-15695700 | Msa0719980:intron | 65.0% | |
GGTCGATCCCTACCACCGCT+TGG | + | chr5_1:15695692-15695711 | None:intergenic | 65.0% | |
CGGTGCCCATACCCCAGAGT+TGG | + | chr5_1:15695720-15695739 | None:intergenic | 65.0% | |
!! | CACGGATGGGCTGGTTAGGG+GGG | - | chr5_1:15696174-15696193 | Msa0719980:intron | 65.0% |
AAAACGGGGGGAGGGGAGGG+GGG | + | chr5_1:15693815-15693834 | None:intergenic | 70.0% | |
AAACGGGGGGAGGGGAGGGG+GGG | + | chr5_1:15693814-15693833 | None:intergenic | 75.0% | |
! | AACGGGGGGAGGGGAGGGGG+GGG | + | chr5_1:15693813-15693832 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 15690186 | 15698379 | 15690186 | ID=Msa0719980;Name=Msa0719980 |
chr5_1 | mRNA | 15690186 | 15698379 | 15690186 | ID=Msa0719980-mRNA-1;Parent=Msa0719980;Name=Msa0719980-mRNA-1;_AED=0.19;_eAED=0.19;_QI=57|0.71|0.86|0.93|0.92|0.93|15|523|534 |
chr5_1 | exon | 15690186 | 15690664 | 15690186 | ID=Msa0719980-mRNA-1:exon:6091;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15690911 | 15691089 | 15690911 | ID=Msa0719980-mRNA-1:exon:6090;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15691731 | 15691844 | 15691731 | ID=Msa0719980-mRNA-1:exon:6089;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15691922 | 15692041 | 15691922 | ID=Msa0719980-mRNA-1:exon:6088;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15692541 | 15692618 | 15692541 | ID=Msa0719980-mRNA-1:exon:6087;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15692826 | 15692904 | 15692826 | ID=Msa0719980-mRNA-1:exon:6086;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15693172 | 15693282 | 15693172 | ID=Msa0719980-mRNA-1:exon:6085;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15693384 | 15693445 | 15693384 | ID=Msa0719980-mRNA-1:exon:6084;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15693537 | 15693638 | 15693537 | ID=Msa0719980-mRNA-1:exon:6083;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15694236 | 15694322 | 15694236 | ID=Msa0719980-mRNA-1:exon:6082;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15694420 | 15694477 | 15694420 | ID=Msa0719980-mRNA-1:exon:6081;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15696252 | 15696349 | 15696252 | ID=Msa0719980-mRNA-1:exon:6080;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15696518 | 15696604 | 15696518 | ID=Msa0719980-mRNA-1:exon:6079;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15697028 | 15697125 | 15697028 | ID=Msa0719980-mRNA-1:exon:6078;Parent=Msa0719980-mRNA-1 |
chr5_1 | exon | 15697947 | 15698379 | 15697947 | ID=Msa0719980-mRNA-1:exon:6077;Parent=Msa0719980-mRNA-1 |
chr5_1 | five_prime_UTR | 15698323 | 15698379 | 15698323 | ID=Msa0719980-mRNA-1:five_prime_utr;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15697947 | 15698322 | 15697947 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15697028 | 15697125 | 15697028 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15696518 | 15696604 | 15696518 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15696252 | 15696349 | 15696252 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15694420 | 15694477 | 15694420 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15694236 | 15694322 | 15694236 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15693537 | 15693638 | 15693537 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15693384 | 15693445 | 15693384 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15693172 | 15693282 | 15693172 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15692826 | 15692904 | 15692826 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15692541 | 15692618 | 15692541 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15691922 | 15692041 | 15691922 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15691731 | 15691844 | 15691731 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | CDS | 15690955 | 15691089 | 15690955 | ID=Msa0719980-mRNA-1:cds;Parent=Msa0719980-mRNA-1 |
chr5_1 | three_prime_UTR | 15690911 | 15690954 | 15690911 | ID=Msa0719980-mRNA-1:three_prime_utr;Parent=Msa0719980-mRNA-1 |
chr5_1 | three_prime_UTR | 15690186 | 15690664 | 15690186 | ID=Msa0719980-mRNA-1:three_prime_utr;Parent=Msa0719980-mRNA-1 |
Gene Sequence |
Protein sequence |