Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423250 | sp|P30706|PLSB_PEA | 77.956 | 499 | 68 | 5 | 1 | 499 | 1 | 457 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423250 | A0A396HVR0 | 89.087 | 504 | 27 | 4 | 1 | 499 | 1 | 481 | 0.0 | 862 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0719980 | Msa1423250 | 0.980838 | 3.756976e-151 | -8.615850e-47 |
| Msa0802770 | Msa1423250 | 0.955251 | 4.656089e-113 | -8.615850e-47 |
| Msa1085570 | Msa1423250 | 0.810904 | 9.140640e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423250 | MtrunA17_Chr5g0410661 | 89.087 | 504 | 27 | 4 | 1 | 499 | 1 | 481 | 0.0 | 862 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1423250 | AT1G32200.1 | 61.697 | 436 | 137 | 4 | 64 | 498 | 52 | 458 | 0.0 | 556 |
| Msa1423250 | AT1G32200.2 | 61.697 | 436 | 137 | 4 | 64 | 498 | 52 | 458 | 0.0 | 556 |
Find 123 sgRNAs with CRISPR-Local
Find 525 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGATACCTTGTTCATTTC+TGG | 0.097282 | tig0025526:+17301 | None:intergenic |
| AAGGCTCTCTCTTTGCTTTA+TGG | 0.111318 | tig0025526:+15666 | None:intergenic |
| TTGTTTGCAGATGTTCTTTC+TGG | 0.133137 | tig0025526:-16475 | Msa1423250:intron |
| TAAAGAAATTTCTGCTAATA+TGG | 0.208936 | tig0025526:-17357 | Msa1423250:CDS |
| CTAAGGGACGAATATAATTT+TGG | 0.210411 | tig0025526:+15624 | None:intergenic |
| AAAATTGGTAAAATTATATT+TGG | 0.216776 | tig0025526:+9781 | None:intergenic |
| TCTTCTTCTGTAACAACTTC+TGG | 0.218853 | tig0025526:-17440 | Msa1423250:CDS |
| GGAGTGGATCACAAATAATT+TGG | 0.242672 | tig0025526:-12248 | Msa1423250:CDS |
| GTGTCGGAAAAGCTTATTTC+TGG | 0.251355 | tig0025526:+11124 | None:intergenic |
| CATGCTTATACGAGGCATTC+AGG | 0.297292 | tig0025526:-11406 | Msa1423250:intron |
| CTGAAACAGATTACTGATAA+TGG | 0.323405 | tig0025526:+9877 | None:intergenic |
| GTCGATCCCTACCACCGCTT+GGG | 0.326320 | tig0025526:+12220 | None:intergenic |
| ATATTAGCAGAAATTTCTTT+AGG | 0.327144 | tig0025526:+17359 | None:intergenic |
| CAATACAATCTCATCTGCTT+TGG | 0.332538 | tig0025526:+15925 | None:intergenic |
| CGAAGGCTTGTCGATCATTC+AGG | 0.340682 | tig0025526:-11351 | Msa1423250:CDS |
| CTCTTCCATTTGAATGAAAA+GGG | 0.362801 | tig0025526:+13795 | None:intergenic |
| GCTCTTCCATTTGAATGAAA+AGG | 0.376426 | tig0025526:+13794 | None:intergenic |
| TTCCATCCCTTCAGCAATAG+TGG | 0.377040 | tig0025526:+16417 | None:intergenic |
| CATAATGCCTCCTCCACTTA+AGG | 0.402090 | tig0025526:-11286 | Msa1423250:intron |
| TTACAAGAAAGTGAACTTAC+CGG | 0.405473 | tig0025526:+12171 | None:intergenic |
| CTGGATCAGCTTCACTTTGG+TGG | 0.409775 | tig0025526:+12954 | None:intergenic |
| AATACAATCTCATCTGCTTT+GGG | 0.414398 | tig0025526:+15926 | None:intergenic |
| ATTTAACTCAAAATTACAAA+TGG | 0.415465 | tig0025526:+9701 | None:intergenic |
| AGCAGAGGTCAAAATGCAAT+TGG | 0.416702 | tig0025526:-9602 | Msa1423250:three_prime_UTR |
| TCCACATATTGCTGAGAACT+TGG | 0.418931 | tig0025526:-12900 | Msa1423250:intron |
| GGAAATTTCCATCGAGCCCT+TGG | 0.422026 | tig0025526:+9937 | None:intergenic |
| TAAGAATTGTACCTGAAAAT+CGG | 0.431216 | tig0025526:+10264 | None:intergenic |
| TGAATAATTTGATGATGAAA+AGG | 0.432945 | tig0025526:+9641 | None:intergenic |
| TTTGGTCTCTTATCAGTCAA+TGG | 0.435531 | tig0025526:+9799 | None:intergenic |
| AACTCACTTGAAATCAACTA+AGG | 0.446753 | tig0025526:+15607 | None:intergenic |
| AAAAGAATTATATCATATCA+TGG | 0.448408 | tig0025526:-11166 | Msa1423250:CDS |
| GGTCGATCCCTACCACCGCT+TGG | 0.456868 | tig0025526:+12219 | None:intergenic |
| CTATGCAAGCCCTTCAGTAT+TGG | 0.458759 | tig0025526:-12751 | Msa1423250:CDS |
| ATCGACCAGTTGCCAACTCT+GGG | 0.459369 | tig0025526:-12203 | Msa1423250:CDS |
| ATGTTTCAGGTTATTAAAAG+TGG | 0.465113 | tig0025526:-15953 | Msa1423250:intron |
| CAGTTGCCAACTCTGGGGTA+TGG | 0.466803 | tig0025526:-12197 | Msa1423250:CDS |
| AGCAGCAATGCAATAATAGC+TGG | 0.469163 | tig0025526:+12935 | None:intergenic |
| TGGTATGCTTCAAAGACAAA+AGG | 0.469699 | tig0025526:+15686 | None:intergenic |
| CAACTCTGGGGTATGGGCAC+CGG | 0.473989 | tig0025526:-12190 | Msa1423250:CDS |
| TCGCAGCCATGGAAGTAGTT+CGG | 0.476275 | tig0025526:-10315 | Msa1423250:exon |
| AAGAAGAATATGAGGCTCTA+GGG | 0.478399 | tig0025526:+17543 | None:intergenic |
| GCGGTTGAAGGAGAAGAAAA+TGG | 0.480178 | tig0025526:+17578 | None:intergenic |
| TTGAAAAGAAAATATTTGAC+AGG | 0.480447 | tig0025526:+9916 | None:intergenic |
| GACTAATCAATATGATGTGC+TGG | 0.480585 | tig0025526:-10394 | Msa1423250:CDS |
| GAAGAAGAATATGAGGCTCT+AGG | 0.482679 | tig0025526:+17542 | None:intergenic |
| TACACGAAGTCTGAAGGAAA+TGG | 0.484728 | tig0025526:-12549 | Msa1423250:CDS |
| GATCGACCAGTTGCCAACTC+TGG | 0.486441 | tig0025526:-12204 | Msa1423250:CDS |
| CCAAACATGTAGTAGTCAAA+AGG | 0.489757 | tig0025526:+15647 | None:intergenic |
| TGTTCTTTCTGGAATAAAGA+AGG | 0.494479 | tig0025526:-16464 | Msa1423250:CDS |
| ACCAGGTCATATCTATCCTA+TGG | 0.501822 | tig0025526:-11325 | Msa1423250:CDS |
| TTTGACCTCTGCTTATACTG+TGG | 0.503827 | tig0025526:+9612 | None:intergenic |
| AGTTGCCAACTCTGGGGTAT+GGG | 0.506428 | tig0025526:-12196 | Msa1423250:CDS |
| CAGTTTCCTTGTCGCAGCCA+TGG | 0.507421 | tig0025526:-10326 | Msa1423250:CDS |
| GTTCTACAGATTTATGTGGC+AGG | 0.508344 | tig0025526:-12796 | Msa1423250:intron |
| TTCTTGTGAAAATCCTGAAA+AGG | 0.514517 | tig0025526:-11095 | Msa1423250:intron |
| AAGGAACACCATACCTTAAG+TGG | 0.516572 | tig0025526:+11273 | None:intergenic |
| GATTGCCCCAAGCGGTGGTA+GGG | 0.516655 | tig0025526:-12226 | Msa1423250:CDS |
| GCAAGCCCTTCAGTATTGGC+AGG | 0.519641 | tig0025526:-12747 | Msa1423250:intron |
| ATCAGTCAATGGACTGGATG+TGG | 0.519841 | tig0025526:+9810 | None:intergenic |
| CATACCCCAGAGTTGGCAAC+TGG | 0.523117 | tig0025526:+12198 | None:intergenic |
| GTCCACTGAAGAAGAATCAA+AGG | 0.524090 | tig0025526:+11380 | None:intergenic |
| ACCAAGTTCTCAGCAATATG+TGG | 0.525585 | tig0025526:+12899 | None:intergenic |
| ATTATATCATATCATGGGAC+TGG | 0.526296 | tig0025526:-11160 | Msa1423250:CDS |
| ACCCTTTGATTCTTCTTCAG+TGG | 0.526415 | tig0025526:-11382 | Msa1423250:CDS |
| CTTGTTCATTTCTGGCATTG+AGG | 0.527774 | tig0025526:+17309 | None:intergenic |
| TACTGCATCCAAGGGCTCGA+TGG | 0.529105 | tig0025526:-9945 | Msa1423250:three_prime_UTR |
| GGATTGCCCCAAGCGGTGGT+AGG | 0.529108 | tig0025526:-12227 | Msa1423250:CDS |
| TTATTAGTATAGAAAGCAAG+AGG | 0.529389 | tig0025526:+17389 | None:intergenic |
| TCCCACTATTGCTGAAGGGA+TGG | 0.530075 | tig0025526:-16419 | Msa1423250:CDS |
| TATCAGTAATCTGTTTCAGA+AGG | 0.532309 | tig0025526:-9873 | Msa1423250:three_prime_UTR |
| TAGCTGGATCAGCTTCACTT+TGG | 0.539217 | tig0025526:+12951 | None:intergenic |
| TTCACAAGAAGCAGTGGTGT+CGG | 0.540293 | tig0025526:+11108 | None:intergenic |
| AATAGTGGGAGGCAAAGTTC+CGG | 0.541595 | tig0025526:+16432 | None:intergenic |
| AGCAAATACACGAAGTCTGA+AGG | 0.545413 | tig0025526:-12555 | Msa1423250:CDS |
| TTGCCTCCCACTATTGCTGA+AGG | 0.547179 | tig0025526:-16424 | Msa1423250:CDS |
| CACCATACCTTAAGTGGAGG+AGG | 0.547777 | tig0025526:+11279 | None:intergenic |
| ACTGGATGTGGTAAGGAACT+AGG | 0.548773 | tig0025526:+9822 | None:intergenic |
| AATGGAAGAGCAGCTTAAGC+AGG | 0.550921 | tig0025526:-13782 | Msa1423250:intron |
| AATCTCTGATGTGAATCAGT+TGG | 0.554900 | tig0025526:+9977 | None:intergenic |
| GGCTGCGACAAGGAAACTGC+GGG | 0.561455 | tig0025526:+10330 | None:intergenic |
| TCATGGCACAATATTGCCAT+AGG | 0.563505 | tig0025526:+11309 | None:intergenic |
| AAAGAATTATATCATATCAT+GGG | 0.565588 | tig0025526:-11165 | Msa1423250:CDS |
| TCTCTTATCAGTCAATGGAC+TGG | 0.565956 | tig0025526:+9804 | None:intergenic |
| TCCATCCCTTCAGCAATAGT+GGG | 0.571387 | tig0025526:+16418 | None:intergenic |
| TCAATGGACTGGATGTGGTA+AGG | 0.573722 | tig0025526:+9815 | None:intergenic |
| ATAAAGAAGGAAGTAGAAGC+CGG | 0.579063 | tig0025526:-16451 | Msa1423250:CDS |
| GTCGATCATTCAGGTCCACC+AGG | 0.579509 | tig0025526:-11342 | Msa1423250:CDS |
| AGAAGAATATGAGGCTCTAG+GGG | 0.580479 | tig0025526:+17544 | None:intergenic |
| AATGAACCTGCCAATACTGA+AGG | 0.584236 | tig0025526:+12741 | None:intergenic |
| TCCACTGAAGAAGAATCAAA+GGG | 0.586505 | tig0025526:+11381 | None:intergenic |
| ATTTGGATTGCCCCAAGCGG+TGG | 0.587858 | tig0025526:-12231 | Msa1423250:CDS |
| CTCAATGCCAGAAATGAACA+AGG | 0.592909 | tig0025526:-17308 | Msa1423250:intron |
| ATGAACCTGCCAATACTGAA+GGG | 0.595857 | tig0025526:+12742 | None:intergenic |
| TCAAATCCGAACTACTTCCA+TGG | 0.597509 | tig0025526:+10309 | None:intergenic |
| ACTCACTTGAAATCAACTAA+GGG | 0.600267 | tig0025526:+15608 | None:intergenic |
| TGCCTCCCACTATTGCTGAA+GGG | 0.600537 | tig0025526:-16423 | Msa1423250:CDS |
| CTACTTCCATGGCTGCGACA+AGG | 0.604817 | tig0025526:+10320 | None:intergenic |
| ATGATTTAGAATTCAAGACT+AGG | 0.608001 | tig0025526:+17708 | None:intergenic |
| CGGTGCCCATACCCCAGAGT+TGG | 0.608757 | tig0025526:+12191 | None:intergenic |
| TCGATCCCTACCACCGCTTG+GGG | 0.610629 | tig0025526:+12221 | None:intergenic |
| GTGGAGGAGGCATTATGTCA+TGG | 0.612943 | tig0025526:+11292 | None:intergenic |
| TTGTGCAGCACTTCTTACGT+TGG | 0.613885 | tig0025526:-13826 | Msa1423250:intron |
| ATTAGTCACAGAATCATACA+AGG | 0.614049 | tig0025526:+10410 | None:intergenic |
| ATACTGAAGGGCTTGCATAG+AGG | 0.616766 | tig0025526:+12754 | None:intergenic |
| GAAGGGCTTGCATAGAGGAT+CGG | 0.619436 | tig0025526:+12759 | None:intergenic |
| TCTTCCATTTGAATGAAAAG+GGG | 0.627956 | tig0025526:+13796 | None:intergenic |
| GCCATAGGATAGATATGACC+TGG | 0.629103 | tig0025526:+11324 | None:intergenic |
| GTAGTTGCATTAGATCGAAG+AGG | 0.630367 | tig0025526:+17473 | None:intergenic |
| CTTCAGTGGACAATATGCGA+AGG | 0.630655 | tig0025526:-11368 | Msa1423250:CDS |
| TGGCTGCGACAAGGAAACTG+CGG | 0.638817 | tig0025526:+10329 | None:intergenic |
| GGATGTGGTAAGGAACTAGG+AGG | 0.656917 | tig0025526:+9825 | None:intergenic |
| GAAGAAGAAGAACTACGAAG+AGG | 0.658333 | tig0025526:+17506 | None:intergenic |
| ATCCCTTCAGCAATAGTGGG+AGG | 0.659784 | tig0025526:+16421 | None:intergenic |
| GAACACCATACCTTAAGTGG+AGG | 0.667740 | tig0025526:+11276 | None:intergenic |
| GTGCTGGAGTCTGCCATACA+CGG | 0.674923 | tig0025526:-10378 | Msa1423250:CDS |
| AATTGGATGATGATTCACAT+TGG | 0.685531 | tig0025526:-9585 | Msa1423250:three_prime_UTR |
| ATGCACATACCTTAAAAGCG+TGG | 0.687163 | tig0025526:+12526 | None:intergenic |
| ACGTGCCACAGTATAAGCAG+AGG | 0.702190 | tig0025526:-9617 | Msa1423250:three_prime_UTR |
| GATGTGGTAAGGAACTAGGA+GGG | 0.704901 | tig0025526:+9826 | None:intergenic |
| GAAGAATATGAGGCTCTAGG+GGG | 0.707099 | tig0025526:+17545 | None:intergenic |
| ATAGGATAGATATGACCTGG+TGG | 0.707955 | tig0025526:+11327 | None:intergenic |
| TCGACCAGTTGCCAACTCTG+GGG | 0.718939 | tig0025526:-12202 | Msa1423250:CDS |
| ATAATTTGGATTGCCCCAAG+CGG | 0.725991 | tig0025526:-12234 | Msa1423250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAAAGTAAAATTGTTTT+CGG | + | tig0025526:10362-10381 | None:intergenic | 10.0% |
| !! | ATGGAAAATAAAATAATAAA+TGG | - | tig0025526:12341-12360 | Msa1423250:intron | 10.0% |
| !! | TGGAAAATAAAATAATAAAT+GGG | - | tig0025526:12342-12361 | Msa1423250:intron | 10.0% |
| !! | TTTCAAAAAAAAAAAAAAAC+GGG | + | tig0025526:13194-13213 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTGAAAGAA+AGG | + | tig0025526:15466-15485 | None:intergenic | 10.0% |
| !! | ATTGTAAATTTGTAATATAA+TGG | - | tig0025526:16605-16624 | Msa1423250:intron | 10.0% |
| !! | AAAATTGGTAAAATTATATT+TGG | + | tig0025526:17492-17511 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTGTATC+AGG | - | tig0025526:17508-17527 | Msa1423250:CDS | 10.0% |
| !!! | TATTTGAGTTGTTTATTTAT+TGG | - | tig0025526:10227-10246 | Msa1423250:intron | 15.0% |
| !! | AATTAAAAGGTTATAAACAT+AGG | + | tig0025526:10933-10952 | None:intergenic | 15.0% |
| !! | AACAGTTAACTTTAATTAAA+AGG | + | tig0025526:10946-10965 | None:intergenic | 15.0% |
| !!! | CAATGTAATTTTGATTTTAA+CGG | - | tig0025526:11955-11974 | Msa1423250:intron | 15.0% |
| !! | CATTCAATAAATATTGAATT+TGG | + | tig0025526:12587-12606 | None:intergenic | 15.0% |
| !! | TTCAAAAAAAAAAAAAAACG+GGG | + | tig0025526:13193-13212 | None:intergenic | 15.0% |
| !! | TTTATGAATATGTTAACATA+GGG | + | tig0025526:14230-14249 | None:intergenic | 15.0% |
| !! | ATTTATGAATATGTTAACAT+AGG | + | tig0025526:14231-14250 | None:intergenic | 15.0% |
| !!! | TTTTAATTTGATATTTATGC+TGG | - | tig0025526:14565-14584 | Msa1423250:intron | 15.0% |
| !! | AAGCATATACAAAATAATAA+AGG | + | tig0025526:15285-15304 | None:intergenic | 15.0% |
| !! | AAACCAACTAAATTAAAAAA+TGG | + | tig0025526:15613-15632 | None:intergenic | 15.0% |
| !! | AATAAGAGAAAAATATATCA+GGG | + | tig0025526:16037-16056 | None:intergenic | 15.0% |
| !! | AAATAAGAGAAAAATATATC+AGG | + | tig0025526:16038-16057 | None:intergenic | 15.0% |
| !! | AAAAGAATTATATCATATCA+TGG | - | tig0025526:16104-16123 | Msa1423250:intron | 15.0% |
| !! | AAAGAATTATATCATATCAT+GGG | - | tig0025526:16105-16124 | Msa1423250:intron | 15.0% |
| !!! | GACTTTTTTAATTTGATTAT+TGG | - | tig0025526:16792-16811 | Msa1423250:intron | 15.0% |
| !! | ATTTAACTCAAAATTACAAA+TGG | + | tig0025526:17572-17591 | None:intergenic | 15.0% |
| !! | ATATTAGCAGAAATTTCTTT+AGG | + | tig0025526:9914-9933 | None:intergenic | 20.0% |
| !! | TAAAGAAATTTCTGCTAATA+TGG | - | tig0025526:9913-9932 | Msa1423250:three_prime_UTR | 20.0% |
| !! | TGATTATACTCTTTCTTTAA+AGG | + | tig0025526:10205-10224 | None:intergenic | 20.0% |
| !! | TTTATTTATTGGCATAAGTT+TGG | - | tig0025526:10238-10257 | Msa1423250:intron | 20.0% |
| !!! | ATTTTTTCTTTTGTGTTTGT+AGG | - | tig0025526:10542-10561 | Msa1423250:intron | 20.0% |
| !! | TGACTATTGTTAACTAAAAT+TGG | - | tig0025526:10675-10694 | Msa1423250:intron | 20.0% |
| !! | GACTATTGTTAACTAAAATT+GGG | - | tig0025526:10676-10695 | Msa1423250:intron | 20.0% |
| !!! | TTTATTAGATCGCATATTTT+TGG | - | tig0025526:11382-11401 | Msa1423250:CDS | 20.0% |
| !!! | TTATTTTATTTTCCATCTGT+GGG | + | tig0025526:12337-12356 | None:intergenic | 20.0% |
| !!! | ATTATTTTATTTTCCATCTG+TGG | + | tig0025526:12338-12357 | None:intergenic | 20.0% |
| !! | AACAGATAAATTCATAACTA+GGG | + | tig0025526:13143-13162 | None:intergenic | 20.0% |
| !! | TCAAAAAAAAAAAAAAACGG+GGG | + | tig0025526:13192-13211 | None:intergenic | 20.0% |
| !! | ACATGCTTAATTTAAAGATT+TGG | - | tig0025526:13283-13302 | Msa1423250:intron | 20.0% |
| !! | TACATTTAAGAATAGATATG+AGG | + | tig0025526:13417-13436 | None:intergenic | 20.0% |
| !! | GCATATTAAAATAAATAGCA+AGG | + | tig0025526:13808-13827 | None:intergenic | 20.0% |
| !!! | GATTGTTTTCAATATTTCAT+TGG | - | tig0025526:13916-13935 | Msa1423250:intron | 20.0% |
| !! | TGTTAACATATTCATAAATG+TGG | - | tig0025526:14232-14251 | Msa1423250:intron | 20.0% |
| !! | GTTAACATATTCATAAATGT+GGG | - | tig0025526:14233-14252 | Msa1423250:intron | 20.0% |
| !! | TTAACATATTCATAAATGTG+GGG | - | tig0025526:14234-14253 | Msa1423250:intron | 20.0% |
| !!! | ATTACGTTTTTCATTTATGT+AGG | - | tig0025526:14624-14643 | Msa1423250:intron | 20.0% |
| !! | TTGAATCCAAATCTTAAAAA+AGG | - | tig0025526:14869-14888 | Msa1423250:intron | 20.0% |
| !! | TGAATCCAAATCTTAAAAAA+GGG | - | tig0025526:14870-14889 | Msa1423250:intron | 20.0% |
| !!! | AATGTACTTTTTTTTGTTAC+AGG | - | tig0025526:15001-15020 | Msa1423250:intron | 20.0% |
| !! | GAAACAAAATATCATTAACT+GGG | - | tig0025526:15204-15223 | Msa1423250:intron | 20.0% |
| !! | ATAAAGTACATATGTTAGAT+AGG | - | tig0025526:15313-15332 | Msa1423250:intron | 20.0% |
| !!! | TATGTTGGTTTTATAACAAA+CGG | + | tig0025526:15442-15461 | None:intergenic | 20.0% |
| !!! | AGGTAATAAAAGTATATACT+CGG | + | tig0025526:15647-15666 | None:intergenic | 20.0% |
| !! | AAAACACTATTAAATACAGA+CGG | - | tig0025526:16368-16387 | Msa1423250:intron | 20.0% |
| !! | TAAATTCCATATAAGCTATT+AGG | - | tig0025526:16425-16444 | Msa1423250:CDS | 20.0% |
| !! | TAAATGTTAATACTCAGTTT+CGG | + | tig0025526:16549-16568 | None:intergenic | 20.0% |
| !!! | TTAATTTGATTATTGGAACA+TGG | - | tig0025526:16799-16818 | Msa1423250:intron | 20.0% |
| !! | TAATTTGATTATTGGAACAT+GGG | - | tig0025526:16800-16819 | Msa1423250:intron | 20.0% |
| !! | AACAAATCTTGATTATTAGA+TGG | - | tig0025526:17112-17131 | Msa1423250:intron | 20.0% |
| !! | ACAAATCTTGATTATTAGAT+GGG | - | tig0025526:17113-17132 | Msa1423250:intron | 20.0% |
| !! | AAAATGCTAAAATTGAAGAT+TGG | + | tig0025526:17182-17201 | None:intergenic | 20.0% |
| !!! | TTCAATTTTAGCATTTTCTA+CGG | - | tig0025526:17185-17204 | Msa1423250:intron | 20.0% |
| !! | TTGAAAAGAAAATATTTGAC+AGG | + | tig0025526:17357-17376 | None:intergenic | 20.0% |
| !!! | TGAATAATTTGATGATGAAA+AGG | + | tig0025526:17632-17651 | None:intergenic | 20.0% |
| !! | ATGATTTAGAATTCAAGACT+AGG | + | tig0025526:9565-9584 | None:intergenic | 25.0% |
| !! | AAGATTTCTTCTTTTTGTGA+CGG | + | tig0025526:9655-9674 | None:intergenic | 25.0% |
| ! | TTATTAGTATAGAAAGCAAG+AGG | + | tig0025526:9884-9903 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+TGG | - | tig0025526:10440-10459 | Msa1423250:intron | 25.0% |
| ! | ATCAAACCACAAACTAAAAA+TGG | + | tig0025526:10711-10730 | None:intergenic | 25.0% |
| !! | TTACTGCACTTTTATAGTTA+AGG | + | tig0025526:10887-10906 | None:intergenic | 25.0% |
| !!! | AAACAATTTCTAGTATCTTG+TGG | - | tig0025526:10987-11006 | Msa1423250:intron | 25.0% |
| !!! | AACAATTTCTAGTATCTTGT+GGG | - | tig0025526:10988-11007 | Msa1423250:intron | 25.0% |
| !!! | CAGTTAAAGAAAGCTATTTT+TGG | + | tig0025526:11056-11075 | None:intergenic | 25.0% |
| ! | TGATATAGTTCGTTAATTTC+CGG | - | tig0025526:11107-11126 | Msa1423250:CDS | 25.0% |
| ! | CTTTATGATGATAAAAACAG+TGG | - | tig0025526:11158-11177 | Msa1423250:CDS | 25.0% |
| !! | ACTTTTAATAACCTGAAACA+TGG | + | tig0025526:11318-11337 | None:intergenic | 25.0% |
| !!! | ATGTTTCAGGTTATTAAAAG+TGG | - | tig0025526:11317-11336 | Msa1423250:CDS | 25.0% |
| !!! | AAATCAGACTGATTTTTAAC+AGG | - | tig0025526:11559-11578 | Msa1423250:intron | 25.0% |
| ! | TTGAATTGCTTAATAAACTC+TGG | + | tig0025526:12070-12089 | None:intergenic | 25.0% |
| ! | TTATCGTCATTTATATCCTA+TGG | + | tig0025526:12963-12982 | None:intergenic | 25.0% |
| !! | AATGAGATCATAGATTTTGT+CGG | + | tig0025526:12988-13007 | None:intergenic | 25.0% |
| ! | CAACAGATAAATTCATAACT+AGG | + | tig0025526:13144-13163 | None:intergenic | 25.0% |
| ! | CAAAAAAAAAAAAAAACGGG+GGG | + | tig0025526:13191-13210 | None:intergenic | 25.0% |
| ! | AAAAATAACTTGATCCTTCT+TGG | - | tig0025526:13211-13230 | Msa1423250:intron | 25.0% |
| !! | GGTAATGGTACATATAATAA+GGG | + | tig0025526:13663-13682 | None:intergenic | 25.0% |
| !!! | TGGTAATGGTACATATAATA+AGG | + | tig0025526:13664-13683 | None:intergenic | 25.0% |
| !! | AAATGTTGACATAATTTGCA+TGG | + | tig0025526:13833-13852 | None:intergenic | 25.0% |
| ! | TGATAACTGTAGTACTTAAT+GGG | + | tig0025526:14115-14134 | None:intergenic | 25.0% |
| ! | AAGATTGAAAAAATTACTGC+AGG | - | tig0025526:14268-14287 | Msa1423250:intron | 25.0% |
| ! | AGATTGAAAAAATTACTGCA+GGG | - | tig0025526:14269-14288 | Msa1423250:intron | 25.0% |
| ! | ACATAAATCTGTAGAACAAA+AGG | + | tig0025526:14471-14490 | None:intergenic | 25.0% |
| !! | TTTTGTTCTACAGATTTATG+TGG | - | tig0025526:14470-14489 | Msa1423250:intron | 25.0% |
| ! | CTTCAAATTTGTAGAAAACA+TGG | + | tig0025526:14839-14858 | None:intergenic | 25.0% |
| ! | ACATCGACATATCAATATAA+GGG | + | tig0025526:14973-14992 | None:intergenic | 25.0% |
| ! | AACATCGACATATCAATATA+AGG | + | tig0025526:14974-14993 | None:intergenic | 25.0% |
| ! | TCGATCATATGATTCATATT+CGG | - | tig0025526:15182-15201 | Msa1423250:intron | 25.0% |
| ! | GGAAACAAAATATCATTAAC+TGG | - | tig0025526:15203-15222 | Msa1423250:intron | 25.0% |
| !!! | ATGTTGGTTTTATAACAAAC+GGG | + | tig0025526:15441-15460 | None:intergenic | 25.0% |
| !!! | GCACCATTTTTTAATTTAGT+TGG | - | tig0025526:15607-15626 | Msa1423250:intron | 25.0% |
| ! | TTCATGATAAGCAAATCATA+AGG | + | tig0025526:15667-15686 | None:intergenic | 25.0% |
| ! | AGACTTATGCATATTTCATA+TGG | - | tig0025526:15762-15781 | Msa1423250:intron | 25.0% |
| ! | ATAATAAATGTAGAGATCTG+AGG | + | tig0025526:16233-16252 | None:intergenic | 25.0% |
| ! | AATAGTCCTAATAGCTTATA+TGG | + | tig0025526:16434-16453 | None:intergenic | 25.0% |
| ! | ATAAGCTATTAGGACTATTA+AGG | - | tig0025526:16435-16454 | Msa1423250:CDS | 25.0% |
| ! | TATCCAAATTTCTCATTCAA+AGG | + | tig0025526:16480-16499 | None:intergenic | 25.0% |
| ! | TAACATTTACAAACATTTGC+TGG | - | tig0025526:16560-16579 | Msa1423250:intron | 25.0% |
| ! | CAAAGAATCTATGTATCTAA+CGG | + | tig0025526:16773-16792 | None:intergenic | 25.0% |
| ! | TAAGAATTGTACCTGAAAAT+CGG | + | tig0025526:17009-17028 | None:intergenic | 25.0% |
| !! | GTTATTTGCTTGAATTTTCA+TGG | - | tig0025526:17207-17226 | Msa1423250:intron | 25.0% |
| AGAAGAAGAAGAAGAATATG+AGG | + | tig0025526:9738-9757 | None:intergenic | 30.0% | |
| AAAGATACCTTGTTCATTTC+TGG | + | tig0025526:9972-9991 | None:intergenic | 30.0% | |
| ATAAGTTTGGTTAGACTGTT+TGG | - | tig0025526:10251-10270 | Msa1423250:intron | 30.0% | |
| TAAGTTTGGTTAGACTGTTT+GGG | - | tig0025526:10252-10271 | Msa1423250:intron | 30.0% | |
| ACAAACTAAAAATGGCTTCT+TGG | + | tig0025526:10703-10722 | None:intergenic | 30.0% | |
| !!! | AAGAAGCCATTTTTAGTTTG+TGG | - | tig0025526:10702-10721 | Msa1423250:intron | 30.0% |
| !! | TGTTCTTTCTGGAATAAAGA+AGG | - | tig0025526:10806-10825 | Msa1423250:intron | 30.0% |
| GATATAGTTCGTTAATTTCC+GGG | - | tig0025526:11108-11127 | Msa1423250:CDS | 30.0% | |
| AATACAATCTCATCTGCTTT+GGG | + | tig0025526:11347-11366 | None:intergenic | 30.0% | |
| !!! | ATCAGTCTGATTTTTTAGCA+TGG | + | tig0025526:11552-11571 | None:intergenic | 30.0% |
| ! | CTAAGGGACGAATATAATTT+TGG | + | tig0025526:11649-11668 | None:intergenic | 30.0% |
| ACTCACTTGAAATCAACTAA+GGG | + | tig0025526:11665-11684 | None:intergenic | 30.0% | |
| AACTCACTTGAAATCAACTA+AGG | + | tig0025526:11666-11685 | None:intergenic | 30.0% | |
| ! | GATTAGTCAAATTTCATGCA+TGG | - | tig0025526:11774-11793 | Msa1423250:intron | 30.0% |
| CAATAAGCTAAGATTGTGAT+GGG | - | tig0025526:11830-11849 | Msa1423250:intron | 30.0% | |
| AAGTATAAGATATGCATGCT+TGG | - | tig0025526:11853-11872 | Msa1423250:intron | 30.0% | |
| AGTATAAGATATGCATGCTT+GGG | - | tig0025526:11854-11873 | Msa1423250:intron | 30.0% | |
| GCTTAACATGATAATCCTAT+GGG | + | tig0025526:11897-11916 | None:intergenic | 30.0% | |
| TGCTTAACATGATAATCCTA+TGG | + | tig0025526:11898-11917 | None:intergenic | 30.0% | |
| ATTGCTTAATAAACTCTGGA+AGG | + | tig0025526:12066-12085 | None:intergenic | 30.0% | |
| ATTAAGCAATTCAATCGTTC+TGG | - | tig0025526:12076-12095 | Msa1423250:intron | 30.0% | |
| ATACATTAGTGTATGACACA+TGG | - | tig0025526:12237-12256 | Msa1423250:CDS | 30.0% | |
| !!! | ATAGTAGATTTTGGTGTTCA+AGG | - | tig0025526:12260-12279 | Msa1423250:intron | 30.0% |
| !!! | TAGTAGATTTTGGTGTTCAA+GGG | - | tig0025526:12261-12280 | Msa1423250:intron | 30.0% |
| GGATATTGTAGAAGCAATTA+TGG | - | tig0025526:12282-12301 | Msa1423250:intron | 30.0% | |
| GAAAAAAAGGAAGAAAGAAG+TGG | - | tig0025526:12440-12459 | Msa1423250:intron | 30.0% | |
| GAACTACAAAATTGTATTGG+AGG | - | tig0025526:12542-12561 | Msa1423250:CDS | 30.0% | |
| TACAAAATTGTATTGGAGGA+GGG | - | tig0025526:12546-12565 | Msa1423250:CDS | 30.0% | |
| !!! | TTAGGCTTTGTTTAGGATTT+TGG | + | tig0025526:12738-12757 | None:intergenic | 30.0% |
| !!! | AGATTTTGACTACATCTTAC+AGG | - | tig0025526:13024-13043 | Msa1423250:intron | 30.0% |
| !!! | GATTTTGACTACATCTTACA+GGG | - | tig0025526:13025-13044 | Msa1423250:intron | 30.0% |
| TTCTATACATACAACCAAGA+AGG | + | tig0025526:13228-13247 | None:intergenic | 30.0% | |
| TCTTCCATTTGAATGAAAAG+GGG | + | tig0025526:13477-13496 | None:intergenic | 30.0% | |
| CTCTTCCATTTGAATGAAAA+GGG | + | tig0025526:13478-13497 | None:intergenic | 30.0% | |
| AGCAAGCATTTGAATGAAAA+GGG | + | tig0025526:13541-13560 | None:intergenic | 30.0% | |
| AAGCAAGCATTTGAATGAAA+AGG | + | tig0025526:13542-13561 | None:intergenic | 30.0% | |
| AATGGTACATATAATAAGGG+AGG | + | tig0025526:13660-13679 | None:intergenic | 30.0% | |
| TGTACCATTACCAAATTCTA+AGG | - | tig0025526:13671-13690 | Msa1423250:intron | 30.0% | |
| ATGCATAAGCTTGACATATA+TGG | - | tig0025526:13712-13731 | Msa1423250:intron | 30.0% | |
| !! | TGTAAAAGTTAGTCTTCTTC+AGG | - | tig0025526:13760-13779 | Msa1423250:intron | 30.0% |
| TCAATCATAAATCTAGACTG+TGG | - | tig0025526:13867-13886 | Msa1423250:intron | 30.0% | |
| TTGAAAACAATCAAACGAGA+CGG | + | tig0025526:13908-13927 | None:intergenic | 30.0% | |
| AAACCAAATTTACCAGTGTA+AGG | - | tig0025526:14010-14029 | Msa1423250:intron | 30.0% | |
| GATAACTGTAGTACTTAATG+GGG | + | tig0025526:14114-14133 | None:intergenic | 30.0% | |
| GTGATAACTGTAGTACTTAA+TGG | + | tig0025526:14116-14135 | None:intergenic | 30.0% | |
| ATACACAAGAACCCATAAAT+CGG | + | tig0025526:14202-14221 | None:intergenic | 30.0% | |
| !!! | CTCTTCCCTTTTTTAAGATT+TGG | + | tig0025526:14878-14897 | None:intergenic | 30.0% |
| CACACAAGATACTATACAAA+GGG | + | tig0025526:14925-14944 | None:intergenic | 30.0% | |
| ACACACAAGATACTATACAA+AGG | + | tig0025526:14926-14945 | None:intergenic | 30.0% | |
| TGTGTGTAATAGTTGTTGAT+TGG | - | tig0025526:14939-14958 | Msa1423250:intron | 30.0% | |
| !!! | ACTTTTTTTTGTTACAGGAG+TGG | - | tig0025526:15006-15025 | Msa1423250:intron | 30.0% |
| TTACAAGAAAGTGAACTTAC+CGG | + | tig0025526:15102-15121 | None:intergenic | 30.0% | |
| GTACATATGTTAGATAGGAT+TGG | - | tig0025526:15318-15337 | Msa1423250:intron | 30.0% | |
| ACTGGTTATGCTTAAATAGA+GGG | + | tig0025526:15356-15375 | None:intergenic | 30.0% | |
| AACTGGTTATGCTTAAATAG+AGG | + | tig0025526:15357-15376 | None:intergenic | 30.0% | |
| !! | TGACCTTTTTCACTGAAAAT+AGG | - | tig0025526:15396-15415 | Msa1423250:intron | 30.0% |
| !! | TTTTGAAAGAAAGGCTATGT+TGG | + | tig0025526:15457-15476 | None:intergenic | 30.0% |
| AGTACATGGATAATTCATCA+CGG | - | tig0025526:15518-15537 | Msa1423250:intron | 30.0% | |
| !! | TGATTTGCTTATCATGAAAG+CGG | - | tig0025526:15669-15688 | Msa1423250:CDS | 30.0% |
| ATGGAAATTCATAATCAGCA+TGG | + | tig0025526:15847-15866 | None:intergenic | 30.0% | |
| TTTCAACCTGCAAAATTACA+CGG | + | tig0025526:16070-16089 | None:intergenic | 30.0% | |
| ! | TTGCAGGTTGAAAAAGAAAT+TGG | - | tig0025526:16077-16096 | Msa1423250:intron | 30.0% |
| ! | TGCAGGTTGAAAAAGAAATT+GGG | - | tig0025526:16078-16097 | Msa1423250:intron | 30.0% |
| ATTATATCATATCATGGGAC+TGG | - | tig0025526:16110-16129 | Msa1423250:intron | 30.0% | |
| TTCTTGTGAAAATCCTGAAA+AGG | - | tig0025526:16175-16194 | Msa1423250:intron | 30.0% | |
| TATCCTTGTAGTAAGAAGTA+TGG | - | tig0025526:16309-16328 | Msa1423250:intron | 30.0% | |
| !!! | TTTGGTACTGTTCTTTTTTG+TGG | + | tig0025526:16505-16524 | None:intergenic | 30.0% |
| ACATAGATCATTAACTACAG+AGG | + | tig0025526:16636-16655 | None:intergenic | 30.0% | |
| !!! | TTTTAAGTTCAGAACGATGA+GGG | + | tig0025526:16716-16735 | None:intergenic | 30.0% |
| !!! | TTTTTAAGTTCAGAACGATG+AGG | + | tig0025526:16717-16736 | None:intergenic | 30.0% |
| AACGGATAATAAATCATGTG+TGG | + | tig0025526:16755-16774 | None:intergenic | 30.0% | |
| ATTAGTCACAGAATCATACA+AGG | + | tig0025526:16863-16882 | None:intergenic | 30.0% | |
| TTCAGGTACAATTCTTACTT+TGG | - | tig0025526:17012-17031 | Msa1423250:intron | 30.0% | |
| TTGAAAACGTTTCTCATTGA+TGG | - | tig0025526:17085-17104 | Msa1423250:intron | 30.0% | |
| ! | TTTTGTAGATGCAAGTTACA+AGG | - | tig0025526:17255-17274 | Msa1423250:intron | 30.0% |
| CTGAAACAGATTACTGATAA+TGG | + | tig0025526:17396-17415 | None:intergenic | 30.0% | |
| TATCAGTAATCTGTTTCAGA+AGG | - | tig0025526:17397-17416 | Msa1423250:CDS | 30.0% | |
| AATTGGATGATGATTCACAT+TGG | - | tig0025526:17685-17704 | Msa1423250:five_prime_UTR | 30.0% | |
| AAGAAGAATATGAGGCTCTA+GGG | + | tig0025526:9730-9749 | None:intergenic | 35.0% | |
| AGATCGAAGAGGAAAAAAAG+TGG | + | tig0025526:9789-9808 | None:intergenic | 35.0% | |
| TCTTCTTCTGTAACAACTTC+TGG | - | tig0025526:9830-9849 | Msa1423250:three_prime_UTR | 35.0% | |
| AGCAAGAGGAGAAAAATAAG+AGG | + | tig0025526:9870-9889 | None:intergenic | 35.0% | |
| !!! | GTTGCTGCTTTTTCTTTTTG+TGG | - | tig0025526:10650-10669 | Msa1423250:intron | 35.0% |
| TTGTTTGCAGATGTTCTTTC+TGG | - | tig0025526:10795-10814 | Msa1423250:intron | 35.0% | |
| ATAAAGAAGGAAGTAGAAGC+CGG | - | tig0025526:10819-10838 | Msa1423250:intron | 35.0% | |
| AGTTTACTCATGATTCACTG+TGG | - | tig0025526:11021-11040 | Msa1423250:intron | 35.0% | |
| GAAACATGGTTGCAAACAAA+AGG | + | tig0025526:11304-11323 | None:intergenic | 35.0% | |
| TTTGTTTGCAACCATGTTTC+AGG | - | tig0025526:11304-11323 | Msa1423250:CDS | 35.0% | |
| CAATACAATCTCATCTGCTT+TGG | + | tig0025526:11348-11367 | None:intergenic | 35.0% | |
| !!! | TCGCATATTTTTGGATGTGA+AGG | - | tig0025526:11391-11410 | Msa1423250:CDS | 35.0% |
| AATCAAAGAGTCTGTATGCA+AGG | + | tig0025526:11459-11478 | None:intergenic | 35.0% | |
| TGGTATGCTTCAAAGACAAA+AGG | + | tig0025526:11587-11606 | None:intergenic | 35.0% | |
| CCAAACATGTAGTAGTCAAA+AGG | + | tig0025526:11626-11645 | None:intergenic | 35.0% | |
| !! | CCTTTTGACTACTACATGTT+TGG | - | tig0025526:11623-11642 | Msa1423250:intron | 35.0% |
| CAATGCAAAAGAGAAGAAAG+AGG | + | tig0025526:11705-11724 | None:intergenic | 35.0% | |
| GCAATAAGCTAAGATTGTGA+TGG | - | tig0025526:11829-11848 | Msa1423250:intron | 35.0% | |
| ! | CATGATAATCCTATGGGTTA+TGG | + | tig0025526:11891-11910 | None:intergenic | 35.0% |
| GATTATCATGTTAAGCACGT+TGG | - | tig0025526:11901-11920 | Msa1423250:intron | 35.0% | |
| GGTTGAAGCTAATGGTTTAT+CGG | - | tig0025526:11922-11941 | Msa1423250:intron | 35.0% | |
| GTTGAAGCTAATGGTTTATC+GGG | - | tig0025526:11923-11942 | Msa1423250:intron | 35.0% | |
| ACAACTCACATTTACGCTTA+AGG | - | tig0025526:12160-12179 | Msa1423250:CDS | 35.0% | |
| ! | GACACATGGATAGTAGATTT+TGG | - | tig0025526:12251-12270 | Msa1423250:intron | 35.0% |
| GAAGAAAGAAGTGGAAAGAA+TGG | - | tig0025526:12449-12468 | Msa1423250:intron | 35.0% | |
| AATACGAAATCCCCCTAATT+TGG | - | tig0025526:12517-12536 | Msa1423250:intron | 35.0% | |
| ATACGAAATCCCCCTAATTT+GGG | - | tig0025526:12518-12537 | Msa1423250:intron | 35.0% | |
| TTTGTAGTTCCCCCAAATTA+GGG | + | tig0025526:12532-12551 | None:intergenic | 35.0% | |
| ! | TTTTGTAGTTCCCCCAAATT+AGG | + | tig0025526:12533-12552 | None:intergenic | 35.0% |
| GGGGAACTACAAAATTGTAT+TGG | - | tig0025526:12539-12558 | Msa1423250:CDS | 35.0% | |
| CTACAAAATTGTATTGGAGG+AGG | - | tig0025526:12545-12564 | Msa1423250:CDS | 35.0% | |
| !! | CTTTGTTTAGGATTTTGGAG+GGG | + | tig0025526:12733-12752 | None:intergenic | 35.0% |
| !!! | GCTTTGTTTAGGATTTTGGA+GGG | + | tig0025526:12734-12753 | None:intergenic | 35.0% |
| TAAACAAAGCCTAAGACTCT+CGG | - | tig0025526:12744-12763 | Msa1423250:intron | 35.0% | |
| AAAGAAAATCCGAGAGTCTT+AGG | + | tig0025526:12756-12775 | None:intergenic | 35.0% | |
| AGTTTGACAAAACAGGAGTA+TGG | + | tig0025526:12786-12805 | None:intergenic | 35.0% | |
| ATGAATAAACACGTGGTCAT+AGG | + | tig0025526:12861-12880 | None:intergenic | 35.0% | |
| TATTCATTAGACCCTGCAAT+AGG | - | tig0025526:12874-12893 | Msa1423250:intron | 35.0% | |
| ATTCATTAGACCCTGCAATA+GGG | - | tig0025526:12875-12894 | Msa1423250:intron | 35.0% | |
| GATGTAGTCAAAATCTGCAA+AGG | + | tig0025526:13020-13039 | None:intergenic | 35.0% | |
| CATAAGAGATCTCCATTTGA+GGG | + | tig0025526:13074-13093 | None:intergenic | 35.0% | |
| TCATAAGAGATCTCCATTTG+AGG | + | tig0025526:13075-13094 | None:intergenic | 35.0% | |
| AAAAAAAAAAAACGGGGGGA+GGG | + | tig0025526:13187-13206 | None:intergenic | 35.0% | |
| AAAAAAAAAAAAACGGGGGG+AGG | + | tig0025526:13188-13207 | None:intergenic | 35.0% | |
| ! | AAAGCCTACTTCTAAAGGTA+TGG | + | tig0025526:13311-13330 | None:intergenic | 35.0% |
| GCTCTTCCATTTGAATGAAA+AGG | + | tig0025526:13479-13498 | None:intergenic | 35.0% | |
| ATGTTGCCAACGTTAGAAAT+TGG | + | tig0025526:13516-13535 | None:intergenic | 35.0% | |
| GCAAGCATTTGAATGAAAAG+GGG | + | tig0025526:13540-13559 | None:intergenic | 35.0% | |
| !! | AATGCTTGCTTTTACGTTGT+AGG | - | tig0025526:13551-13570 | Msa1423250:intron | 35.0% |
| TACTATCTTCGCTCTTTCTA+GGG | + | tig0025526:13620-13639 | None:intergenic | 35.0% | |
| TTACTATCTTCGCTCTTTCT+AGG | + | tig0025526:13621-13640 | None:intergenic | 35.0% | |
| CCAACCTTAGAATTTGGTAA+TGG | + | tig0025526:13678-13697 | None:intergenic | 35.0% | |
| !! | CCATTACCAAATTCTAAGGT+TGG | - | tig0025526:13675-13694 | Msa1423250:intron | 35.0% |
| CAGATACCAACCTTAGAATT+TGG | + | tig0025526:13684-13703 | None:intergenic | 35.0% | |
| !! | AAAAGTTAGTCTTCTTCAGG+TGG | - | tig0025526:13763-13782 | Msa1423250:intron | 35.0% |
| TGAAAACAATCAAACGAGAC+GGG | + | tig0025526:13907-13926 | None:intergenic | 35.0% | |
| GTCTTCAGATCAGTTTCATT+AGG | - | tig0025526:13938-13957 | Msa1423250:intron | 35.0% | |
| CGCAGAATTGCAATTAAGTT+CGG | + | tig0025526:13974-13993 | None:intergenic | 35.0% | |
| GAACCTTACACTGGTAAATT+TGG | + | tig0025526:14016-14035 | None:intergenic | 35.0% | |
| AATTCCAGGCAAATTTGTGA+CGG | + | tig0025526:14042-14061 | None:intergenic | 35.0% | |
| !! | ATCTAGCATTGACAAATTCC+AGG | + | tig0025526:14056-14075 | None:intergenic | 35.0% |
| CAAGGTTGACATTTCATGAA+AGG | + | tig0025526:14176-14195 | None:intergenic | 35.0% | |
| TCAACCTTGATTCCGATTTA+TGG | - | tig0025526:14187-14206 | Msa1423250:intron | 35.0% | |
| CAACCTTGATTCCGATTTAT+GGG | - | tig0025526:14188-14207 | Msa1423250:intron | 35.0% | |
| GATTCAAAGTCAACCTCATT+AGG | + | tig0025526:14598-14617 | None:intergenic | 35.0% | |
| CGATGCATTGAAGTCTTAAT+TGG | + | tig0025526:14808-14827 | None:intergenic | 35.0% | |
| GGAGTGGATCACAAATAATT+TGG | - | tig0025526:15022-15041 | Msa1423250:intron | 35.0% | |
| ! | CATATGATCGATCTAAGATG+TGG | + | tig0025526:15173-15192 | None:intergenic | 35.0% |
| CTTAAATAGAGGGTTAGACA+TGG | + | tig0025526:15346-15365 | None:intergenic | 35.0% | |
| ! | CCACCTATTTTCAGTGAAAA+AGG | + | tig0025526:15402-15421 | None:intergenic | 35.0% |
| !! | CCTTTTTCACTGAAAATAGG+TGG | - | tig0025526:15399-15418 | Msa1423250:intron | 35.0% |
| TCTACTGTATGTATGAGACA+AGG | + | tig0025526:15494-15513 | None:intergenic | 35.0% | |
| ATACAGTAGAGTCAAGTACA+TGG | - | tig0025526:15504-15523 | Msa1423250:intron | 35.0% | |
| ATGGATAATTCATCACGGAT+GGG | - | tig0025526:15523-15542 | Msa1423250:intron | 35.0% | |
| GCATGGAAATATCACAGAAT+TGG | + | tig0025526:15830-15849 | None:intergenic | 35.0% | |
| TGAATTTCCATGCTTATACG+AGG | - | tig0025526:15856-15875 | Msa1423250:intron | 35.0% | |
| TCCACTGAAGAAGAATCAAA+GGG | + | tig0025526:15892-15911 | None:intergenic | 35.0% | |
| ! | GCAGGTTGAAAAAGAAATTG+GGG | - | tig0025526:16079-16098 | Msa1423250:intron | 35.0% |
| GTGAAAATCCTGAAAAGGTA+AGG | - | tig0025526:16180-16199 | Msa1423250:intron | 35.0% | |
| ! | CATATTCTCCTTACCTTTTC+AGG | + | tig0025526:16191-16210 | None:intergenic | 35.0% |
| TAAGTCACCTATTGTCATTC+TGG | - | tig0025526:16286-16305 | Msa1423250:intron | 35.0% | |
| AAGGATACCAGAATGACAAT+AGG | + | tig0025526:16296-16315 | None:intergenic | 35.0% | |
| AGCTATTAGGACTATTAAGG+AGG | - | tig0025526:16438-16457 | Msa1423250:CDS | 35.0% | |
| GCTATTAGGACTATTAAGGA+GGG | - | tig0025526:16439-16458 | Msa1423250:CDS | 35.0% | |
| GTGCCTTTGAATGAGAAATT+TGG | - | tig0025526:16474-16493 | Msa1423250:intron | 35.0% | |
| TAATACTCAGTTTCGGTAGA+GGG | + | tig0025526:16542-16561 | None:intergenic | 35.0% | |
| TTAATACTCAGTTTCGGTAG+AGG | + | tig0025526:16543-16562 | None:intergenic | 35.0% | |
| AGATCATTAACTACAGAGGT+GGG | + | tig0025526:16632-16651 | None:intergenic | 35.0% | |
| TAGATCATTAACTACAGAGG+TGG | + | tig0025526:16633-16652 | None:intergenic | 35.0% | |
| GACTAATCAATATGATGTGC+TGG | - | tig0025526:16876-16895 | Msa1423250:intron | 35.0% | |
| !!! | TACACTTTTCACCGATTTTC+AGG | - | tig0025526:16995-17014 | Msa1423250:intron | 35.0% |
| AATCTCTGATGTGAATCAGT+TGG | + | tig0025526:17296-17315 | None:intergenic | 35.0% | |
| TTTGGTCTCTTATCAGTCAA+TGG | + | tig0025526:17474-17493 | None:intergenic | 35.0% | |
| ! | AGAAGAATATGAGGCTCTAG+GGG | + | tig0025526:9729-9748 | None:intergenic | 40.0% |
| GAAGAAGAATATGAGGCTCT+AGG | + | tig0025526:9731-9750 | None:intergenic | 40.0% | |
| GAAGAAGAAGAACTACGAAG+AGG | + | tig0025526:9767-9786 | None:intergenic | 40.0% | |
| GTAGTTGCATTAGATCGAAG+AGG | + | tig0025526:9800-9819 | None:intergenic | 40.0% | |
| !! | CTTGTTCATTTCTGGCATTG+AGG | + | tig0025526:9964-9983 | None:intergenic | 40.0% |
| CTCAATGCCAGAAATGAACA+AGG | - | tig0025526:9962-9981 | Msa1423250:three_prime_UTR | 40.0% | |
| ATATGTGTGATGTCGCTGTT+TGG | - | tig0025526:10469-10488 | Msa1423250:intron | 40.0% | |
| AAGGCTCTCTCTTTGCTTTA+TGG | + | tig0025526:11607-11626 | None:intergenic | 40.0% | |
| ! | ATCCTATGGGTTATGGAGAA+TGG | + | tig0025526:11884-11903 | None:intergenic | 40.0% |
| ! | ACAGGATACAGCATTTTCAC+AGG | + | tig0025526:12024-12043 | None:intergenic | 40.0% |
| CTGTATCCTGTATGAATCCT+GGG | - | tig0025526:12033-12052 | Msa1423250:intron | 40.0% | |
| AGATTCAATCTGATGCACTG+TGG | + | tig0025526:12136-12155 | None:intergenic | 40.0% | |
| ACTCACATTTACGCTTAAGG+AGG | - | tig0025526:12163-12182 | Msa1423250:CDS | 40.0% | |
| ! | AAAGAATGGAGAGCTTTGTG+AGG | - | tig0025526:12463-12482 | Msa1423250:intron | 40.0% |
| ! | AAGAATGGAGAGCTTTGTGA+GGG | - | tig0025526:12464-12483 | Msa1423250:intron | 40.0% |
| TACGAAATCCCCCTAATTTG+GGG | - | tig0025526:12519-12538 | Msa1423250:intron | 40.0% | |
| TTGTAGTTCCCCCAAATTAG+GGG | + | tig0025526:12531-12550 | None:intergenic | 40.0% | |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | tig0025526:12552-12571 | Msa1423250:CDS | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | - | tig0025526:12553-12572 | Msa1423250:CDS | 40.0% |
| TTTCGAGGGATGAGATTAGA+GGG | + | tig0025526:12705-12724 | None:intergenic | 40.0% | |
| !!! | GGCTTTGTTTAGGATTTTGG+AGG | + | tig0025526:12735-12754 | None:intergenic | 40.0% |
| !! | GAGAGTCTTAGGCTTTGTTT+AGG | + | tig0025526:12745-12764 | None:intergenic | 40.0% |
| TGTAGGGAGTTTGACAAAAC+AGG | + | tig0025526:12793-12812 | None:intergenic | 40.0% | |
| AAGGCTGGCAATATGATGTA+GGG | + | tig0025526:12809-12828 | None:intergenic | 40.0% | |
| TCATAGGACAATGGAGAAGA+GGG | + | tig0025526:12845-12864 | None:intergenic | 40.0% | |
| GGGTCTAATGAATAAACACG+TGG | + | tig0025526:12868-12887 | None:intergenic | 40.0% | |
| TTCATTAGACCCTGCAATAG+GGG | - | tig0025526:12876-12895 | Msa1423250:intron | 40.0% | |
| GCTTAGTTGAAAGTTGCTCA+TGG | - | tig0025526:12933-12952 | Msa1423250:CDS | 40.0% | |
| ! | GTTTTCTTTGTGCCCTCAAA+TGG | - | tig0025526:13059-13078 | Msa1423250:intron | 40.0% |
| AAAAAAAAAAACGGGGGGAG+GGG | + | tig0025526:13186-13205 | None:intergenic | 40.0% | |
| ! | GGAACCATACCTTTAGAAGT+AGG | - | tig0025526:13304-13323 | Msa1423250:intron | 40.0% |
| AGCACAAAGCCTACTTCTAA+AGG | + | tig0025526:13316-13335 | None:intergenic | 40.0% | |
| AACTGGCATGCATATGAAAG+GGG | + | tig0025526:13381-13400 | None:intergenic | 40.0% | |
| GAACTGGCATGCATATGAAA+GGG | + | tig0025526:13382-13401 | None:intergenic | 40.0% | |
| !! | AGATATGAGGTGCTGTAAGA+TGG | + | tig0025526:13404-13423 | None:intergenic | 40.0% |
| ! | CATGCCCCTTTTCATTCAAA+TGG | - | tig0025526:13470-13489 | Msa1423250:intron | 40.0% |
| ACTATCTTCGCTCTTTCTAG+GGG | + | tig0025526:13619-13638 | None:intergenic | 40.0% | |
| AATCAAACGAGACGGGATTT+CGG | + | tig0025526:13900-13919 | None:intergenic | 40.0% | |
| ATTCCAGGCAAATTTGTGAC+GGG | + | tig0025526:14041-14060 | None:intergenic | 40.0% | |
| GAACCCATAAATCGGAATCA+AGG | + | tig0025526:14194-14213 | None:intergenic | 40.0% | |
| AGCAGCAATGCAATAATAGC+TGG | + | tig0025526:14338-14357 | None:intergenic | 40.0% | |
| TCCACATATTGCTGAGAACT+TGG | - | tig0025526:14370-14389 | Msa1423250:intron | 40.0% | |
| ACCAAGTTCTCAGCAATATG+TGG | + | tig0025526:14374-14393 | None:intergenic | 40.0% | |
| GTTCTACAGATTTATGTGGC+AGG | - | tig0025526:14474-14493 | Msa1423250:intron | 40.0% | |
| ATGAACCTGCCAATACTGAA+GGG | + | tig0025526:14531-14550 | None:intergenic | 40.0% | |
| TGCTGGCATATTTCCTAATG+AGG | - | tig0025526:14582-14601 | Msa1423250:intron | 40.0% | |
| ! | CTTTTCATCTCTACAAGTGC+TGG | + | tig0025526:14692-14711 | None:intergenic | 40.0% |
| AGCAAATACACGAAGTCTGA+AGG | - | tig0025526:14715-14734 | Msa1423250:intron | 40.0% | |
| TACACGAAGTCTGAAGGAAA+TGG | - | tig0025526:14721-14740 | Msa1423250:intron | 40.0% | |
| ATGCACATACCTTAAAAGCG+TGG | + | tig0025526:14747-14766 | None:intergenic | 40.0% | |
| ATAATTTGGATTGCCCCAAG+CGG | - | tig0025526:15036-15055 | Msa1423250:intron | 40.0% | |
| GCATAACCAGTTGTTTGCAA+AGG | - | tig0025526:15365-15384 | Msa1423250:intron | 40.0% | |
| AAGCAACCTTTGCAAACAAC+TGG | + | tig0025526:15374-15393 | None:intergenic | 40.0% | |
| CATGGATAATTCATCACGGA+TGG | - | tig0025526:15522-15541 | Msa1423250:intron | 40.0% | |
| CTAAGTGCATAACATCCTCT+CGG | - | tig0025526:15794-15813 | Msa1423250:intron | 40.0% | |
| ACCCTTTGATTCTTCTTCAG+TGG | - | tig0025526:15888-15907 | Msa1423250:CDS | 40.0% | |
| GTCCACTGAAGAAGAATCAA+AGG | + | tig0025526:15893-15912 | None:intergenic | 40.0% | |
| ATAGGATAGATATGACCTGG+TGG | + | tig0025526:15946-15965 | None:intergenic | 40.0% | |
| ACCAGGTCATATCTATCCTA+TGG | - | tig0025526:15945-15964 | Msa1423250:CDS | 40.0% | |
| TCATGGCACAATATTGCCAT+AGG | + | tig0025526:15964-15983 | None:intergenic | 40.0% | |
| AAGGAACACCATACCTTAAG+TGG | + | tig0025526:16000-16019 | None:intergenic | 40.0% | |
| ! | TTGACACCGTGTAATTTTGC+AGG | - | tig0025526:16061-16080 | Msa1423250:intron | 40.0% |
| GTGTCGGAAAAGCTTATTTC+TGG | + | tig0025526:16149-16168 | None:intergenic | 40.0% | |
| ! | AGGATTTTCACAAGAAGCAG+TGG | + | tig0025526:16171-16190 | None:intergenic | 40.0% |
| CAGCCATACTTCTTACTACA+AGG | + | tig0025526:16315-16334 | None:intergenic | 40.0% | |
| ! | TTCTCATTCAAAGGCACACA+GGG | + | tig0025526:16471-16490 | None:intergenic | 40.0% |
| ! | TTTCTCATTCAAAGGCACAC+AGG | + | tig0025526:16472-16491 | None:intergenic | 40.0% |
| CAGTACCAAATGTGAACCTT+TGG | - | tig0025526:16515-16534 | Msa1423250:intron | 40.0% | |
| ACCCAAGGATACTGAATACT+GGG | + | tig0025526:16666-16685 | None:intergenic | 40.0% | |
| AAGTTTGAGCATATGACCCA+AGG | + | tig0025526:16681-16700 | None:intergenic | 40.0% | |
| ATTGGAACATGGGTTCTGTA+TGG | - | tig0025526:16810-16829 | Msa1423250:intron | 40.0% | |
| !!! | CAATCCTTTTTTGCCGTGTA+TGG | + | tig0025526:16908-16927 | None:intergenic | 40.0% |
| CATACACGGCAAAAAAGGAT+TGG | - | tig0025526:16906-16925 | Msa1423250:intron | 40.0% | |
| TCAAATCCGAACTACTTCCA+TGG | + | tig0025526:16964-16983 | None:intergenic | 40.0% | |
| ! | GCTTGAATTTTCATGGCTGA+AGG | - | tig0025526:17214-17233 | Msa1423250:intron | 40.0% |
| ! | ACTGTCTTTTACTGCATCCA+AGG | - | tig0025526:17316-17335 | Msa1423250:CDS | 40.0% |
| ! | CTGTCTTTTACTGCATCCAA+GGG | - | tig0025526:17317-17336 | Msa1423250:CDS | 40.0% |
| TCTCTTATCAGTCAATGGAC+TGG | + | tig0025526:17469-17488 | None:intergenic | 40.0% | |
| TTTGACCTCTGCTTATACTG+TGG | + | tig0025526:17661-17680 | None:intergenic | 40.0% | |
| AGCAGAGGTCAAAATGCAAT+TGG | - | tig0025526:17668-17687 | Msa1423250:exon | 40.0% | |
| GCGGTTGAAGGAGAAGAAAA+TGG | + | tig0025526:9695-9714 | None:intergenic | 45.0% | |
| GGAGAGAAAAATGCGGTTGA+AGG | + | tig0025526:9707-9726 | None:intergenic | 45.0% | |
| TCTAGGGGGAGAGAAAAATG+CGG | + | tig0025526:9714-9733 | None:intergenic | 45.0% | |
| !! | GAAGAATATGAGGCTCTAGG+GGG | + | tig0025526:9728-9747 | None:intergenic | 45.0% |
| GTTTGGTTAGACTGTTTGGG+AGG | - | tig0025526:10255-10274 | Msa1423250:intron | 45.0% | |
| CTGTTTGGGAGGATAACTTG+TGG | - | tig0025526:10266-10285 | Msa1423250:intron | 45.0% | |
| CACATATAGCTGGCCATGTT+TGG | + | tig0025526:10456-10475 | None:intergenic | 45.0% | |
| AGCGACATCACACATATAGC+TGG | + | tig0025526:10466-10485 | None:intergenic | 45.0% | |
| ! | AATAGTGGGAGGCAAAGTTC+CGG | + | tig0025526:10841-10860 | None:intergenic | 45.0% |
| TCCATCCCTTCAGCAATAGT+GGG | + | tig0025526:10855-10874 | None:intergenic | 45.0% | |
| TTCCATCCCTTCAGCAATAG+TGG | + | tig0025526:10856-10875 | None:intergenic | 45.0% | |
| TAGTTCGTTAATTTCCGGGC+TGG | - | tig0025526:11112-11131 | Msa1423250:CDS | 45.0% | |
| GTCCATTCTCCATAACCCAT+AGG | - | tig0025526:11879-11898 | Msa1423250:intron | 45.0% | |
| ! | AGCACGTTGGTTGAAGCTAA+TGG | - | tig0025526:11914-11933 | Msa1423250:intron | 45.0% |
| GTATTTGAGCGACACAAGAC+AGG | + | tig0025526:11995-12014 | None:intergenic | 45.0% | |
| GCTGTATCCTGTATGAATCC+TGG | - | tig0025526:12032-12051 | Msa1423250:intron | 45.0% | |
| AGAATGCCCAGGATTCATAC+AGG | + | tig0025526:12042-12061 | None:intergenic | 45.0% | |
| AGTTTATACGCACCCACAGA+TGG | - | tig0025526:12322-12341 | Msa1423250:intron | 45.0% | |
| AAACTCCCAAACAGAGCCTT+AGG | + | tig0025526:12396-12415 | None:intergenic | 45.0% | |
| TAAGGCTCTGTTTGGGAGTT+TGG | - | tig0025526:12395-12414 | Msa1423250:intron | 45.0% | |
| GAAGGGAGGGCTTGAAAAAA+AGG | - | tig0025526:12427-12446 | Msa1423250:intron | 45.0% | |
| ! | AGAATGGAGAGCTTTGTGAG+GGG | - | tig0025526:12465-12484 | Msa1423250:intron | 45.0% |
| ACGAAATCCCCCTAATTTGG+GGG | - | tig0025526:12520-12539 | Msa1423250:intron | 45.0% | |
| TGTAGTTCCCCCAAATTAGG+GGG | + | tig0025526:12530-12549 | None:intergenic | 45.0% | |
| CTTTCGAGGGATGAGATTAG+AGG | + | tig0025526:12706-12725 | None:intergenic | 45.0% | |
| !! | GTTTAGGATTTTGGAGGGGA+GGG | + | tig0025526:12729-12748 | None:intergenic | 45.0% |
| !! | TGTTTAGGATTTTGGAGGGG+AGG | + | tig0025526:12730-12749 | None:intergenic | 45.0% |
| GAAGGCTGGCAATATGATGT+AGG | + | tig0025526:12810-12829 | None:intergenic | 45.0% | |
| GTCATAGGACAATGGAGAAG+AGG | + | tig0025526:12846-12865 | None:intergenic | 45.0% | |
| AACACGTGGTCATAGGACAA+TGG | + | tig0025526:12854-12873 | None:intergenic | 45.0% | |
| AGTTGCTCATGGCAAACCAT+AGG | - | tig0025526:12944-12963 | Msa1423250:CDS | 45.0% | |
| ! | TGAGGGCACAAAGAAAACTG+AGG | + | tig0025526:13057-13076 | None:intergenic | 45.0% |
| GGAACTGGCATGCATATGAA+AGG | + | tig0025526:13383-13402 | None:intergenic | 45.0% | |
| TTGTGCAGCACTTCTTACGT+TGG | - | tig0025526:13444-13463 | Msa1423250:intron | 45.0% | |
| AATGGAAGAGCAGCTTAAGC+AGG | - | tig0025526:13488-13507 | Msa1423250:intron | 45.0% | |
| CAGGTGCCAATTTCTAACGT+TGG | - | tig0025526:13507-13526 | Msa1423250:intron | 45.0% | |
| CTATCTTCGCTCTTTCTAGG+GGG | + | tig0025526:13618-13637 | None:intergenic | 45.0% | |
| !! | AGTTAGTCTTCTTCAGGTGG+TGG | - | tig0025526:13766-13785 | Msa1423250:intron | 45.0% |
| TAGCTGGATCAGCTTCACTT+TGG | + | tig0025526:14322-14341 | None:intergenic | 45.0% | |
| ATACTGAAGGGCTTGCATAG+AGG | + | tig0025526:14519-14538 | None:intergenic | 45.0% | |
| CTATGCAAGCCCTTCAGTAT+TGG | - | tig0025526:14519-14538 | Msa1423250:intron | 45.0% | |
| ! | AGGAAATGGCCACGCTTTTA+AGG | - | tig0025526:14735-14754 | Msa1423250:intron | 45.0% |
| ATAATTCATCACGGATGGGC+TGG | - | tig0025526:15527-15546 | Msa1423250:intron | 45.0% | |
| CTACAAATGAAGTCCCGGTT+TGG | - | tig0025526:15559-15578 | Msa1423250:intron | 45.0% | |
| ACTCCACATTTGAGCCAAAC+CGG | + | tig0025526:15576-15595 | None:intergenic | 45.0% | |
| CGAGAGGATGTTATGCACTT+AGG | + | tig0025526:15796-15815 | None:intergenic | 45.0% | |
| ATTGGTTGTATTGCACCGAG+AGG | + | tig0025526:15812-15831 | None:intergenic | 45.0% | |
| CTGAATGCCTCGTATAAGCA+TGG | + | tig0025526:15866-15885 | None:intergenic | 45.0% | |
| ! | CATGCTTATACGAGGCATTC+AGG | - | tig0025526:15864-15883 | Msa1423250:intron | 45.0% |
| CTTCAGTGGACAATATGCGA+AGG | - | tig0025526:15902-15921 | Msa1423250:CDS | 45.0% | |
| GCCATAGGATAGATATGACC+TGG | + | tig0025526:15949-15968 | None:intergenic | 45.0% | |
| CATAATGCCTCCTCCACTTA+AGG | - | tig0025526:15984-16003 | Msa1423250:intron | 45.0% | |
| GAACACCATACCTTAAGTGG+AGG | + | tig0025526:15997-16016 | None:intergenic | 45.0% | |
| ! | GTGTTCCTTCCTTTGAGAGT+TGG | - | tig0025526:16011-16030 | Msa1423250:intron | 45.0% |
| ATATCAGGGCCAACTCTCAA+AGG | + | tig0025526:16023-16042 | None:intergenic | 45.0% | |
| TTCACAAGAAGCAGTGGTGT+CGG | + | tig0025526:16165-16184 | None:intergenic | 45.0% | |
| TCGAGCTACGTAGCATTCTT+AGG | + | tig0025526:16338-16357 | None:intergenic | 45.0% | |
| ! | TCTCATTCAAAGGCACACAG+GGG | + | tig0025526:16470-16489 | None:intergenic | 45.0% |
| AGGGTCCAAAGGTTCACATT+TGG | + | tig0025526:16523-16542 | None:intergenic | 45.0% | |
| AGCCCAGTATTCAGTATCCT+TGG | - | tig0025526:16661-16680 | Msa1423250:intron | 45.0% | |
| GCCCAGTATTCAGTATCCTT+GGG | - | tig0025526:16662-16681 | Msa1423250:intron | 45.0% | |
| GACCCAAGGATACTGAATAC+TGG | + | tig0025526:16667-16686 | None:intergenic | 45.0% | |
| TCTGCCATACACGGCAAAAA+AGG | - | tig0025526:16901-16920 | Msa1423250:intron | 45.0% | |
| ACAGACGCGTCTTGTAGATT+AGG | - | tig0025526:17061-17080 | Msa1423250:intron | 45.0% | |
| GATGTGGTAAGGAACTAGGA+GGG | + | tig0025526:17447-17466 | None:intergenic | 45.0% | |
| ACTGGATGTGGTAAGGAACT+AGG | + | tig0025526:17451-17470 | None:intergenic | 45.0% | |
| !! | TCAATGGACTGGATGTGGTA+AGG | + | tig0025526:17458-17477 | None:intergenic | 45.0% |
| !! | ATCAGTCAATGGACTGGATG+TGG | + | tig0025526:17463-17482 | None:intergenic | 45.0% |
| !! | AATAAATAATAACATTTAAT+TGG | - | tig0025526:10617-10636 | Msa1423250:intron | 5.0% |
| !!! | TTTTCAAAAAAAAAAAAAAA+CGG | + | tig0025526:13195-13214 | None:intergenic | 5.0% |
| !! | ATACAAAAAAAAAAAAAAAT+TGG | + | tig0025526:17507-17526 | None:intergenic | 5.0% |
| ! | TCGCGTGTCGATAATTCGCT+CGG | - | tig0025526:10022-10041 | Msa1423250:intron | 50.0% |
| TTGCCTCCCACTATTGCTGA+AGG | - | tig0025526:10846-10865 | Msa1423250:intron | 50.0% | |
| TGCCTCCCACTATTGCTGAA+GGG | - | tig0025526:10847-10866 | Msa1423250:intron | 50.0% | |
| ! | ATCCCTTCAGCAATAGTGGG+AGG | + | tig0025526:10852-10871 | None:intergenic | 50.0% |
| TCCCACTATTGCTGAAGGGA+TGG | - | tig0025526:10851-10870 | Msa1423250:intron | 50.0% | |
| AAACAGAGCCTTAGGCTCTG+AGG | + | tig0025526:12388-12407 | None:intergenic | 50.0% | |
| TCAGAGCCTAAGGCTCTGTT+TGG | - | tig0025526:12387-12406 | Msa1423250:intron | 50.0% | |
| CAGAGCCTAAGGCTCTGTTT+GGG | - | tig0025526:12388-12407 | Msa1423250:intron | 50.0% | |
| GCTCTGTTTGGGAGTTTGGA+GGG | - | tig0025526:12399-12418 | Msa1423250:intron | 50.0% | |
| CTCTGTTTGGGAGTTTGGAG+GGG | - | tig0025526:12400-12419 | Msa1423250:intron | 50.0% | |
| GACAATGGAGAAGAGGGTGA+TGG | + | tig0025526:12839-12858 | None:intergenic | 50.0% | |
| TGATGAGCACCCCTATTGCA+GGG | + | tig0025526:12888-12907 | None:intergenic | 50.0% | |
| !! | GAGGTGCTGTAAGATGGAAC+TGG | + | tig0025526:13398-13417 | None:intergenic | 50.0% |
| ! | TCGCTCTTTCTAGGGGGAAA+AGG | + | tig0025526:13612-13631 | None:intergenic | 50.0% |
| TGACGGGAAGAACCTTACAC+TGG | + | tig0025526:14025-14044 | None:intergenic | 50.0% | |
| CTTCCCGTCACAAATTTGCC+TGG | - | tig0025526:14035-14054 | Msa1423250:intron | 50.0% | |
| CTGGATCAGCTTCACTTTGG+TGG | + | tig0025526:14319-14338 | None:intergenic | 50.0% | |
| GAAGGGCTTGCATAGAGGAT+CGG | + | tig0025526:14514-14533 | None:intergenic | 50.0% | |
| ATCGACCAGTTGCCAACTCT+GGG | - | tig0025526:15067-15086 | Msa1423250:intron | 50.0% | |
| !! | AGTTGCCAACTCTGGGGTAT+GGG | - | tig0025526:15074-15093 | Msa1423250:intron | 50.0% |
| AACATCATGAGCTCGACTGC+TGG | + | tig0025526:15252-15271 | None:intergenic | 50.0% | |
| CTCCACATTTGAGCCAAACC+GGG | + | tig0025526:15575-15594 | None:intergenic | 50.0% | |
| CGAAGGCTTGTCGATCATTC+AGG | - | tig0025526:15919-15938 | Msa1423250:CDS | 50.0% | |
| !! | GTGGAGGAGGCATTATGTCA+TGG | + | tig0025526:15981-16000 | None:intergenic | 50.0% |
| TGCCTCCTCCACTTAAGGTA+TGG | - | tig0025526:15989-16008 | Msa1423250:intron | 50.0% | |
| CACCATACCTTAAGTGGAGG+AGG | + | tig0025526:15994-16013 | None:intergenic | 50.0% | |
| AGTTTCGGTAGAGGGTCCAA+AGG | + | tig0025526:16534-16553 | None:intergenic | 50.0% | |
| ACATGGGTTCTGTATGGTGC+AGG | - | tig0025526:16816-16835 | Msa1423250:intron | 50.0% | |
| TCGCAGCCATGGAAGTAGTT+CGG | - | tig0025526:16955-16974 | Msa1423250:intron | 50.0% | |
| GGAAATTTCCATCGAGCCCT+TGG | + | tig0025526:17336-17355 | None:intergenic | 50.0% | |
| GGATGTGGTAAGGAACTAGG+AGG | + | tig0025526:17448-17467 | None:intergenic | 50.0% | |
| ACGTGCCACAGTATAAGCAG+AGG | - | tig0025526:17653-17672 | Msa1423250:CDS | 50.0% | |
| !! | CGTTAATTTCCGGGCTGGCT+TGG | - | tig0025526:11117-11136 | Msa1423250:CDS | 55.0% |
| ! | CTCTGGAAGGTAGAATGCCC+AGG | + | tig0025526:12053-12072 | None:intergenic | 55.0% |
| CTACCTTGCCTCAGAGCCTA+AGG | - | tig0025526:12377-12396 | Msa1423250:intron | 55.0% | |
| GGCTCTGTTTGGGAGTTTGG+AGG | - | tig0025526:12398-12417 | Msa1423250:intron | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | tig0025526:12403-12422 | Msa1423250:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | tig0025526:12404-12423 | Msa1423250:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | tig0025526:12405-12424 | Msa1423250:intron | 55.0% | |
| ! | ATGGAGAGCTTTGTGAGGGG+AGG | - | tig0025526:12468-12487 | Msa1423250:intron | 55.0% |
| ! | TGGAGAGCTTTGTGAGGGGA+GGG | - | tig0025526:12469-12488 | Msa1423250:intron | 55.0% |
| TTTGTGAGGGGAGGGCTTTG+AGG | - | tig0025526:12477-12496 | Msa1423250:intron | 55.0% | |
| ! | TTGTGAGGGGAGGGCTTTGA+GGG | - | tig0025526:12478-12497 | Msa1423250:intron | 55.0% |
| !! | GAGAAGAGGGTGATGGAAGC+GGG | + | tig0025526:12832-12851 | None:intergenic | 55.0% |
| !! | GGAGAAGAGGGTGATGGAAG+CGG | + | tig0025526:12833-12852 | None:intergenic | 55.0% |
| CTGATGAGCACCCCTATTGC+AGG | + | tig0025526:12889-12908 | None:intergenic | 55.0% | |
| AAAAAAACGGGGGGAGGGGA+GGG | + | tig0025526:13182-13201 | None:intergenic | 55.0% | |
| AAAAAAAACGGGGGGAGGGG+AGG | + | tig0025526:13183-13202 | None:intergenic | 55.0% | |
| !! | GCAAGCCCTTCAGTATTGGC+AGG | - | tig0025526:14523-14542 | Msa1423250:intron | 55.0% |
| ATTTGGATTGCCCCAAGCGG+TGG | - | tig0025526:15039-15058 | Msa1423250:intron | 55.0% | |
| GATCGACCAGTTGCCAACTC+TGG | - | tig0025526:15066-15085 | Msa1423250:intron | 55.0% | |
| TCGACCAGTTGCCAACTCTG+GGG | - | tig0025526:15068-15087 | Msa1423250:intron | 55.0% | |
| CATACCCCAGAGTTGGCAAC+TGG | + | tig0025526:15075-15094 | None:intergenic | 55.0% | |
| !! | CAGTTGCCAACTCTGGGGTA+TGG | - | tig0025526:15073-15092 | Msa1423250:intron | 55.0% |
| !! | TCATCACGGATGGGCTGGTT+AGG | - | tig0025526:15532-15551 | Msa1423250:intron | 55.0% |
| !! | CATCACGGATGGGCTGGTTA+GGG | - | tig0025526:15533-15552 | Msa1423250:intron | 55.0% |
| !! | ATCACGGATGGGCTGGTTAG+GGG | - | tig0025526:15534-15553 | Msa1423250:intron | 55.0% |
| GGGGGCTACAAATGAAGTCC+CGG | - | tig0025526:15554-15573 | Msa1423250:intron | 55.0% | |
| !! | GTCCCGGTTTGGCTCAAATG+TGG | - | tig0025526:15570-15589 | Msa1423250:intron | 55.0% |
| GTCGATCATTCAGGTCCACC+AGG | - | tig0025526:15928-15947 | Msa1423250:CDS | 55.0% | |
| CAGGGCCAACTCTCAAAGGA+AGG | + | tig0025526:16019-16038 | None:intergenic | 55.0% | |
| ! | CATTCAAAGGCACACAGGGG+AGG | + | tig0025526:16467-16486 | None:intergenic | 55.0% |
| GTGCTGGAGTCTGCCATACA+CGG | - | tig0025526:16892-16911 | Msa1423250:intron | 55.0% | |
| TGGCTGCGACAAGGAAACTG+CGG | + | tig0025526:16944-16963 | None:intergenic | 55.0% | |
| CAGTTTCCTTGTCGCAGCCA+TGG | - | tig0025526:16944-16963 | Msa1423250:intron | 55.0% | |
| CTACTTCCATGGCTGCGACA+AGG | + | tig0025526:16953-16972 | None:intergenic | 55.0% | |
| TACTGCATCCAAGGGCTCGA+TGG | - | tig0025526:17325-17344 | Msa1423250:CDS | 55.0% | |
| !! | TTTCCGGGCTGGCTTGGAGT+TGG | - | tig0025526:11123-11142 | Msa1423250:CDS | 60.0% |
| ACACCAACTCCAAGCCAGCC+CGG | + | tig0025526:11129-11148 | None:intergenic | 60.0% | |
| !! | GAGCCTTAGGCTCTGAGGCA+AGG | + | tig0025526:12383-12402 | None:intergenic | 60.0% |
| GAGTTTGGAGGGGAGGGGAA+GGG | - | tig0025526:12410-12429 | Msa1423250:intron | 60.0% | |
| !! | TGTGAGGGGAGGGCTTTGAG+GGG | - | tig0025526:12479-12498 | Msa1423250:intron | 60.0% |
| TTGGAGGGGAGGGCTTTCGA+GGG | + | tig0025526:12719-12738 | None:intergenic | 60.0% | |
| TTTGGAGGGGAGGGCTTTCG+AGG | + | tig0025526:12720-12739 | None:intergenic | 60.0% | |
| !! | AGAGGGTGATGGAAGCGGGA+AGG | + | tig0025526:12828-12847 | None:intergenic | 60.0% |
| AAAAAACGGGGGGAGGGGAG+GGG | + | tig0025526:13181-13200 | None:intergenic | 60.0% | |
| GATTGCCCCAAGCGGTGGTA+GGG | - | tig0025526:15044-15063 | Msa1423250:intron | 60.0% | |
| TCGATCCCTACCACCGCTTG+GGG | + | tig0025526:15052-15071 | None:intergenic | 60.0% | |
| GTCGATCCCTACCACCGCTT+GGG | + | tig0025526:15053-15072 | None:intergenic | 60.0% | |
| !! | CAACTCTGGGGTATGGGCAC+CGG | - | tig0025526:15080-15099 | Msa1423250:intron | 60.0% |
| CGACTGCTGGAGTACGCTTC+TGG | + | tig0025526:15239-15258 | None:intergenic | 60.0% | |
| !! | TCACGGATGGGCTGGTTAGG+GGG | - | tig0025526:15535-15554 | Msa1423250:intron | 60.0% |
| GGCTGCGACAAGGAAACTGC+GGG | + | tig0025526:16943-16962 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAGGGGA+AGG | - | tig0025526:12409-12428 | Msa1423250:intron | 65.0% | |
| TTTGGAGGGGAGGGGAAGGG+AGG | - | tig0025526:12413-12432 | Msa1423250:intron | 65.0% | |
| TTGGAGGGGAGGGGAAGGGA+GGG | - | tig0025526:12414-12433 | Msa1423250:intron | 65.0% | |
| !! | GGTGATGGAAGCGGGAAGGC+TGG | + | tig0025526:12824-12843 | None:intergenic | 65.0% |
| AAAAACGGGGGGAGGGGAGG+GGG | + | tig0025526:13180-13199 | None:intergenic | 65.0% | |
| GGATTGCCCCAAGCGGTGGT+AGG | - | tig0025526:15043-15062 | Msa1423250:intron | 65.0% | |
| GGTCGATCCCTACCACCGCT+TGG | + | tig0025526:15054-15073 | None:intergenic | 65.0% | |
| CGGTGCCCATACCCCAGAGT+TGG | + | tig0025526:15082-15101 | None:intergenic | 65.0% | |
| !! | CACGGATGGGCTGGTTAGGG+GGG | - | tig0025526:15536-15555 | Msa1423250:intron | 65.0% |
| AAAACGGGGGGAGGGGAGGG+GGG | + | tig0025526:13179-13198 | None:intergenic | 70.0% | |
| AAACGGGGGGAGGGGAGGGG+GGG | + | tig0025526:13178-13197 | None:intergenic | 75.0% | |
| ! | AACGGGGGGAGGGGAGGGGG+GGG | + | tig0025526:13177-13196 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025526 | gene | 9551 | 17741 | 9551 | ID=Msa1423250;Name=Msa1423250 |
| tig0025526 | mRNA | 9551 | 17741 | 9551 | ID=Msa1423250-mRNA-1;Parent=Msa1423250;Name=Msa1423250-mRNA-1;_AED=0.17;_eAED=0.17;_QI=57|0.91|0.84|1|0.83|0.76|13|523|499 |
| tig0025526 | exon | 9551 | 10029 | 9551 | ID=Msa1423250-mRNA-1:exon:3139;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 10276 | 10454 | 10276 | ID=Msa1423250-mRNA-1:exon:3138;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 11096 | 11209 | 11096 | ID=Msa1423250-mRNA-1:exon:3137;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 11287 | 11414 | 11287 | ID=Msa1423250-mRNA-1:exon:3136;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 12139 | 12269 | 12139 | ID=Msa1423250-mRNA-1:exon:3135;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 12536 | 12646 | 12536 | ID=Msa1423250-mRNA-1:exon:3134;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 12748 | 12809 | 12748 | ID=Msa1423250-mRNA-1:exon:3133;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 12901 | 13002 | 12901 | ID=Msa1423250-mRNA-1:exon:3132;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 13783 | 13840 | 13783 | ID=Msa1423250-mRNA-1:exon:3131;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 15614 | 15711 | 15614 | ID=Msa1423250-mRNA-1:exon:3130;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 15880 | 15966 | 15880 | ID=Msa1423250-mRNA-1:exon:3129;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 16390 | 16487 | 16390 | ID=Msa1423250-mRNA-1:exon:3128;Parent=Msa1423250-mRNA-1 |
| tig0025526 | exon | 17309 | 17741 | 17309 | ID=Msa1423250-mRNA-1:exon:3127;Parent=Msa1423250-mRNA-1 |
| tig0025526 | five_prime_UTR | 17685 | 17741 | 17685 | ID=Msa1423250-mRNA-1:five_prime_utr;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 17309 | 17684 | 17309 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 16390 | 16487 | 16390 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 15880 | 15966 | 15880 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 15614 | 15711 | 15614 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 13783 | 13840 | 13783 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 12901 | 13002 | 12901 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 12748 | 12809 | 12748 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 12536 | 12646 | 12536 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 12139 | 12269 | 12139 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 11287 | 11414 | 11287 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 11096 | 11209 | 11096 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | CDS | 10320 | 10454 | 10320 | ID=Msa1423250-mRNA-1:cds;Parent=Msa1423250-mRNA-1 |
| tig0025526 | three_prime_UTR | 10276 | 10319 | 10276 | ID=Msa1423250-mRNA-1:three_prime_utr;Parent=Msa1423250-mRNA-1 |
| tig0025526 | three_prime_UTR | 9551 | 10029 | 9551 | ID=Msa1423250-mRNA-1:three_prime_utr;Parent=Msa1423250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
