Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724730 | XP_024639654.1 | 84.527 | 433 | 11 | 5 | 1 | 433 | 1 | 377 | 0.0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724730 | sp|O64511|TLOV1_ARATH | 48.309 | 414 | 156 | 9 | 7 | 412 | 19 | 382 | 1.28e-117 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724730 | G7K9S4 | 86.009 | 436 | 16 | 6 | 1 | 433 | 1 | 394 | 0.0 | 671 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0724730 | Msa0844760 | 0.924936 | 3.611456e-90 | -8.615850e-47 |
| Msa0724730 | Msa0844790 | 0.833419 | 5.390916e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724730 | MtrunA17_Chr5g0415981 | 86.009 | 436 | 16 | 6 | 1 | 433 | 1 | 394 | 0.0 | 671 |
| Msa0724730 | MtrunA17_Chr2g0327561 | 39.161 | 143 | 57 | 2 | 265 | 407 | 445 | 557 | 2.81e-26 | 112 |
| Msa0724730 | MtrunA17_Chr2g0327561 | 43.564 | 101 | 56 | 1 | 29 | 129 | 442 | 541 | 1.86e-19 | 91.3 |
| Msa0724730 | MtrunA17_Chr2g0327561 | 38.211 | 123 | 46 | 1 | 270 | 392 | 167 | 259 | 4.91e-19 | 90.1 |
| Msa0724730 | MtrunA17_Chr2g0327561 | 32.414 | 145 | 93 | 2 | 26 | 166 | 156 | 299 | 3.20e-16 | 81.3 |
| Msa0724730 | MtrunA17_Chr8g0369091 | 37.956 | 137 | 55 | 1 | 265 | 401 | 416 | 522 | 1.48e-25 | 109 |
| Msa0724730 | MtrunA17_Chr8g0369091 | 41.026 | 117 | 61 | 2 | 29 | 138 | 413 | 528 | 2.41e-20 | 94.0 |
| Msa0724730 | MtrunA17_Chr8g0369091 | 35.772 | 123 | 49 | 1 | 270 | 392 | 137 | 229 | 1.01e-18 | 89.0 |
| Msa0724730 | MtrunA17_Chr8g0369091 | 30.570 | 193 | 124 | 5 | 13 | 201 | 115 | 301 | 1.43e-18 | 88.6 |
| Msa0724730 | MtrunA17_Chr4g0030361 | 39.062 | 128 | 48 | 1 | 265 | 392 | 126 | 223 | 5.06e-25 | 107 |
| Msa0724730 | MtrunA17_Chr4g0030361 | 43.564 | 101 | 56 | 1 | 29 | 129 | 123 | 222 | 1.83e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0724730 | AT2G02710.1 | 48.309 | 414 | 156 | 9 | 7 | 412 | 19 | 382 | 1.30e-118 | 352 |
| Msa0724730 | AT2G02710.2 | 48.068 | 414 | 155 | 9 | 7 | 412 | 19 | 380 | 2.00e-117 | 348 |
| Msa0724730 | AT2G02710.3 | 48.571 | 385 | 141 | 8 | 7 | 383 | 19 | 354 | 1.28e-108 | 325 |
| Msa0724730 | AT2G02710.4 | 50.000 | 312 | 127 | 7 | 7 | 310 | 19 | 309 | 3.47e-90 | 276 |
| Msa0724730 | AT2G02710.4 | 35.156 | 128 | 52 | 2 | 265 | 391 | 42 | 139 | 2.55e-15 | 77.0 |
| Msa0724730 | AT5G58140.4 | 26.484 | 438 | 243 | 10 | 26 | 424 | 132 | 529 | 1.05e-44 | 165 |
| Msa0724730 | AT5G58140.3 | 26.484 | 438 | 243 | 10 | 26 | 424 | 132 | 529 | 3.17e-44 | 165 |
| Msa0724730 | AT5G58140.6 | 26.484 | 438 | 243 | 10 | 26 | 424 | 132 | 529 | 4.00e-44 | 165 |
| Msa0724730 | AT5G58140.7 | 26.484 | 438 | 243 | 10 | 26 | 424 | 132 | 529 | 4.00e-44 | 165 |
| Msa0724730 | AT5G58140.5 | 26.484 | 438 | 243 | 10 | 26 | 424 | 132 | 529 | 4.00e-44 | 165 |
| Msa0724730 | AT5G58140.2 | 26.484 | 438 | 243 | 10 | 26 | 424 | 132 | 529 | 4.00e-44 | 165 |
| Msa0724730 | AT5G58140.1 | 26.484 | 438 | 243 | 10 | 26 | 424 | 132 | 529 | 4.00e-44 | 165 |
| Msa0724730 | AT3G45780.2 | 37.226 | 137 | 56 | 1 | 265 | 401 | 480 | 586 | 2.61e-24 | 106 |
| Msa0724730 | AT3G45780.2 | 41.463 | 123 | 42 | 1 | 270 | 392 | 207 | 299 | 6.79e-22 | 99.4 |
| Msa0724730 | AT3G45780.2 | 43.564 | 101 | 56 | 1 | 29 | 129 | 477 | 576 | 5.29e-19 | 90.5 |
| Msa0724730 | AT3G45780.2 | 30.345 | 145 | 96 | 2 | 26 | 166 | 196 | 339 | 1.22e-15 | 80.1 |
| Msa0724730 | AT3G45780.1 | 37.226 | 137 | 56 | 1 | 265 | 401 | 480 | 586 | 2.61e-24 | 106 |
| Msa0724730 | AT3G45780.1 | 41.463 | 123 | 42 | 1 | 270 | 392 | 207 | 299 | 6.79e-22 | 99.4 |
| Msa0724730 | AT3G45780.1 | 43.564 | 101 | 56 | 1 | 29 | 129 | 477 | 576 | 5.29e-19 | 90.5 |
| Msa0724730 | AT3G45780.1 | 30.345 | 145 | 96 | 2 | 26 | 166 | 196 | 339 | 1.22e-15 | 80.1 |
Find 117 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTGAATATGGGAAAAT+AGG | 0.110827 | 5_1:+23807328 | None:intergenic |
| TTCAAGTTCCGTTAAAATTA+AGG | 0.139639 | 5_1:-23806614 | Msa0724730:CDS |
| TGTTCTGCTGCTTCTTCTAT+TGG | 0.219487 | 5_1:+23807038 | None:intergenic |
| ACAATCAATAACATAATTAA+TGG | 0.232382 | 5_1:-23807012 | Msa0724730:exon |
| TTGGGGTGTGATGAGGAAAA+TGG | 0.237871 | 5_1:+23807239 | None:intergenic |
| GGAAGGATAAAAGCTCATTT+TGG | 0.238048 | 5_1:-23804063 | Msa0724730:CDS |
| CCTTTGGCACGTATAATATA+TGG | 0.242336 | 5_1:-23801617 | Msa0724730:three_prime_UTR |
| GCGTGGCTAGCGAAGATTAT+TGG | 0.264187 | 5_1:+23806876 | None:intergenic |
| GATGAATATTGAATTGAATA+TGG | 0.267514 | 5_1:+23807319 | None:intergenic |
| CAGGAATCAAGTGTTGGATT+TGG | 0.287990 | 5_1:-23806478 | Msa0724730:CDS |
| TGGAGAAAGGTGGGGAAGGG+AGG | 0.302098 | 5_1:+23807415 | None:intergenic |
| AAAGCTTTGAATTTGTTTAC+TGG | 0.305343 | 5_1:-23804118 | Msa0724730:CDS |
| AGAAGTTTGTTCTGATAGTT+TGG | 0.306617 | 5_1:-23806526 | Msa0724730:CDS |
| CTTCCCCACCTTTCTCCATT+TGG | 0.315829 | 5_1:-23807410 | Msa0724730:five_prime_UTR |
| ACACTAAGCTGTTTCATATC+AGG | 0.325862 | 5_1:+23801733 | None:intergenic |
| GAATTGAATATGGGAAAATA+GGG | 0.330078 | 5_1:+23807329 | None:intergenic |
| CAAATCCAACACTTGATTCC+TGG | 0.331129 | 5_1:+23806479 | None:intergenic |
| TCAAGTTCCGTTAAAATTAA+GGG | 0.340463 | 5_1:-23806613 | Msa0724730:CDS |
| TTCGACGTGTTTCTTCTTCC+AGG | 0.345792 | 5_1:-23806497 | Msa0724730:CDS |
| TGGGGTGTGATGAGGAAAAT+GGG | 0.348275 | 5_1:+23807240 | None:intergenic |
| GAGAGAAGCGAACGTTGTTT+TGG | 0.349634 | 5_1:-23806733 | Msa0724730:CDS |
| CAATTCACACAACATTTAAC+AGG | 0.361896 | 5_1:-23804084 | Msa0724730:CDS |
| TTCTTCACATATCACCTGTT+CGG | 0.374962 | 5_1:-23804036 | Msa0724730:CDS |
| TTCCCGTCAACTGGCTATAG+TGG | 0.379544 | 5_1:+23804796 | None:intergenic |
| CGTGGCTAGCGAAGATTATT+GGG | 0.387551 | 5_1:+23806877 | None:intergenic |
| TTCACGCGCGACGAAGTTCT+TGG | 0.404068 | 5_1:-23806834 | Msa0724730:CDS |
| CGACGACTCTGCACTACAAC+TGG | 0.404927 | 5_1:-23804311 | Msa0724730:intron |
| TCTTCACATATCACCTGTTC+GGG | 0.406751 | 5_1:-23804035 | Msa0724730:CDS |
| CTAAGAATAATAATAATATC+TGG | 0.412972 | 5_1:+23807274 | None:intergenic |
| TCACCTGTTCGGGATGCTAC+TGG | 0.419247 | 5_1:-23804025 | Msa0724730:CDS |
| ACACCAATCTTCCCGTCAAC+TGG | 0.421126 | 5_1:+23804787 | None:intergenic |
| TATACGAGAGACGAGGTATT+GGG | 0.426758 | 5_1:-23804367 | Msa0724730:CDS |
| TGGAAATTCGTGAAGCTGTA+AGG | 0.427129 | 5_1:-23806761 | Msa0724730:CDS |
| TTATACGAGAGACGAGGTAT+TGG | 0.445398 | 5_1:-23804368 | Msa0724730:CDS |
| TCTTCCTTGATTATTTCTCT+TGG | 0.445792 | 5_1:-23804723 | Msa0724730:intron |
| AGGGATTGTGTGAACTAAGA+AGG | 0.446133 | 5_1:+23807348 | None:intergenic |
| CAATTTCATGAAGGCGTCAC+TGG | 0.449712 | 5_1:+23804535 | None:intergenic |
| GCATAAACAATAGGCATGTC+TGG | 0.456311 | 5_1:+23804557 | None:intergenic |
| GGGGTGTGATGAGGAAAATG+GGG | 0.466117 | 5_1:+23807241 | None:intergenic |
| TAGCCAGTTGACGGGAAGAT+TGG | 0.468953 | 5_1:-23804790 | Msa0724730:CDS |
| GCGTCACTGGCATAAACAAT+AGG | 0.471160 | 5_1:+23804548 | None:intergenic |
| ATTGGGTGGTTTGAAAGTGA+TGG | 0.474517 | 5_1:+23806894 | None:intergenic |
| TGGTGGTGGTGGTTCTGTTG+TGG | 0.479793 | 5_1:-23806583 | Msa0724730:CDS |
| GTTAAGGTAGCATACTTTGT+GGG | 0.479990 | 5_1:-23801808 | Msa0724730:intron |
| TGTTAAGGTAGCATACTTTG+TGG | 0.494641 | 5_1:-23801809 | Msa0724730:intron |
| TTCTTCCAGGAATCAAGTGT+TGG | 0.497846 | 5_1:-23806484 | Msa0724730:CDS |
| ATGAATATTGAATTGAATAT+GGG | 0.499372 | 5_1:+23807320 | None:intergenic |
| TTCATCAAAGACATAGTCAT+AGG | 0.505578 | 5_1:-23801662 | Msa0724730:exon |
| ATTTGTTTAGTTTAGACCAT+AGG | 0.506821 | 5_1:+23807158 | None:intergenic |
| TTTCCAGTAGCATCCCGAAC+AGG | 0.507450 | 5_1:+23804022 | None:intergenic |
| CTTTGATGAACCAGCAGACA+TGG | 0.513516 | 5_1:+23801675 | None:intergenic |
| AGGAGTTTATCCATGTCTGC+TGG | 0.514784 | 5_1:-23801685 | Msa0724730:CDS |
| CGAAGTGGTTCCATGTTTCA+AGG | 0.517829 | 5_1:-23806810 | Msa0724730:CDS |
| GTCAAGTTGGCATGGTTGGA+AGG | 0.521901 | 5_1:+23807193 | None:intergenic |
| AAATGGAGAAAGGTGGGGAA+GGG | 0.525291 | 5_1:+23807412 | None:intergenic |
| TTGGGTGGTTTGAAAGTGAT+GGG | 0.526217 | 5_1:+23806895 | None:intergenic |
| AGTTATCGTTGAGATGATAG+AGG | 0.527796 | 5_1:-23801527 | Msa0724730:three_prime_UTR |
| GGGTGTGATGAGGAAAATGG+GGG | 0.528881 | 5_1:+23807242 | None:intergenic |
| CACGCGTTTCTCAACATCAC+TGG | 0.530728 | 5_1:-23806858 | Msa0724730:CDS |
| GAGCTAAGAAGACCCACGTC+AGG | 0.531685 | 5_1:+23804744 | None:intergenic |
| GACGCCTTCATGAAATTGAC+AGG | 0.532996 | 5_1:-23804530 | Msa0724730:intron |
| AGTACCTGTCAATTTCATGA+AGG | 0.534197 | 5_1:+23804526 | None:intergenic |
| TTGAAATAAGTGCTTAGTTG+TGG | 0.534246 | 5_1:+23807107 | None:intergenic |
| ACCCACTATAGCCAGTTGAC+GGG | 0.536576 | 5_1:-23804798 | Msa0724730:CDS |
| TAGTTTAGACCATAGGAATG+AGG | 0.537446 | 5_1:+23807165 | None:intergenic |
| AACCCACTATAGCCAGTTGA+CGG | 0.537779 | 5_1:-23804799 | Msa0724730:CDS |
| GGGATTGTGTGAACTAAGAA+GGG | 0.539891 | 5_1:+23807349 | None:intergenic |
| GACATGTCGTAGGTCGGTGA+TGG | 0.540244 | 5_1:-23806781 | Msa0724730:CDS |
| CAAATGGAGAAAGGTGGGGA+AGG | 0.543314 | 5_1:+23807411 | None:intergenic |
| AATAAGTGCTTAGTTGTGGA+TGG | 0.551966 | 5_1:+23807111 | None:intergenic |
| ATAATATCTGGTGAAAGTTG+TGG | 0.555040 | 5_1:+23807286 | None:intergenic |
| ACGAGGAATATAGACAGTGT+TGG | 0.556633 | 5_1:-23801759 | Msa0724730:CDS |
| TAGTGTGGTTGGTGCAGTCA+AGG | 0.556720 | 5_1:-23801716 | Msa0724730:CDS |
| GTGGTTTGAAAGTGATGGGT+CGG | 0.560649 | 5_1:+23806899 | None:intergenic |
| ACTACCAAATGGAGAAAGGT+GGG | 0.561795 | 5_1:+23807406 | None:intergenic |
| ACCGACCTACGACATGTCGC+TGG | 0.561960 | 5_1:+23806786 | None:intergenic |
| CTAGACTACCAAATGGAGAA+AGG | 0.562515 | 5_1:+23807402 | None:intergenic |
| GATGGGTCGGTGATTGTGAA+TGG | 0.567615 | 5_1:+23806912 | None:intergenic |
| ACAGTTAAGAAAACCCAAAA+CGG | 0.568098 | 5_1:+23806687 | None:intergenic |
| ATAGGCATGTCTGGCAAATG+TGG | 0.572472 | 5_1:+23804566 | None:intergenic |
| TGTCGCTGGACCTTGAAACA+TGG | 0.573546 | 5_1:+23806800 | None:intergenic |
| GGAAATTCGTGAAGCTGTAA+GGG | 0.574198 | 5_1:-23806760 | Msa0724730:CDS |
| AAGGTCCAGCGACATGTCGT+AGG | 0.574903 | 5_1:-23806791 | Msa0724730:CDS |
| TCTACCAAGAGAAATAATCA+AGG | 0.577573 | 5_1:+23804719 | None:intergenic |
| TCATCATCACTTGCCTCGCG+TGG | 0.577812 | 5_1:+23804867 | None:intergenic |
| CCATATATTATACGTGCCAA+AGG | 0.578527 | 5_1:+23801617 | None:intergenic |
| TACAATTACAATTGACAATG+TGG | 0.579781 | 5_1:+23801474 | None:intergenic |
| ATGAAACAGCTTAGTGTGGT+TGG | 0.581811 | 5_1:-23801727 | Msa0724730:CDS |
| CACAGAAAAGATGTTGTCCA+TGG | 0.586739 | 5_1:+23804824 | None:intergenic |
| TCCCGTCAACTGGCTATAGT+GGG | 0.596340 | 5_1:+23804797 | None:intergenic |
| GAGATGCAGCAATCCTGACG+TGG | 0.597630 | 5_1:-23804757 | Msa0724730:CDS |
| TATGGGATTGGGGTGTGATG+AGG | 0.599416 | 5_1:+23807232 | None:intergenic |
| GACTACCAAATGGAGAAAGG+TGG | 0.607815 | 5_1:+23807405 | None:intergenic |
| CATAGTCATAGGATTACTGA+TGG | 0.608261 | 5_1:-23801651 | Msa0724730:exon |
| CAGTTGTAGTGCAGAGTCGT+CGG | 0.610417 | 5_1:+23804312 | None:intergenic |
| AACTATAGAAAGATGAGATG+TGG | 0.614162 | 5_1:+23801363 | None:intergenic |
| TGTTCGGGATGCTACTGGAA+AGG | 0.614560 | 5_1:-23804020 | Msa0724730:intron |
| GAGAAGTGCTGTGACTGCCA+TGG | 0.616486 | 5_1:-23804841 | Msa0724730:CDS |
| GGCTAGCGAAGATTATTGGG+TGG | 0.616506 | 5_1:+23806880 | None:intergenic |
| TCACACAACATTTAACAGGA+AGG | 0.617824 | 5_1:-23804080 | Msa0724730:CDS |
| TGTGTGACTAGACTACCAAA+TGG | 0.625704 | 5_1:+23807395 | None:intergenic |
| AGTCATAGGATTACTGATGG+TGG | 0.626305 | 5_1:-23801648 | Msa0724730:three_prime_UTR |
| GTTATCGTTGAGATGATAGA+GGG | 0.632606 | 5_1:-23801526 | Msa0724730:three_prime_UTR |
| GCTGATGATGATGATGTCAC+TGG | 0.636042 | 5_1:-23806450 | Msa0724730:intron |
| TCCAGCGACATGTCGTAGGT+CGG | 0.636197 | 5_1:-23806787 | Msa0724730:CDS |
| GACGAAGTTCTTGGACGAAG+TGG | 0.637676 | 5_1:-23806825 | Msa0724730:CDS |
| CTTCGAGTGATTCTCGCGCG+TGG | 0.639791 | 5_1:+23806952 | None:intergenic |
| GCGAGGCAAGTGATGATGAG+AGG | 0.642574 | 5_1:-23804863 | Msa0724730:CDS |
| GGTGTGATGAGGAAAATGGG+GGG | 0.652829 | 5_1:+23807243 | None:intergenic |
| CTACCAAATGGAGAAAGGTG+GGG | 0.667457 | 5_1:+23807407 | None:intergenic |
| GGAGAGTGAAGAGCCACGCG+AGG | 0.676117 | 5_1:-23804880 | Msa0724730:CDS |
| AGATGCAGCAATCCTGACGT+GGG | 0.686224 | 5_1:-23804756 | Msa0724730:CDS |
| CAGTGATGTTGAGAAACGCG+TGG | 0.707851 | 5_1:+23806859 | None:intergenic |
| AAATGTGGATTAGTTCTGCG+AGG | 0.718007 | 5_1:+23804581 | None:intergenic |
| TGATATGAAACAGCTTAGTG+TGG | 0.727007 | 5_1:-23801731 | Msa0724730:CDS |
| GTGCAGTCAAGGTTGCAGTG+AGG | 0.741307 | 5_1:-23801705 | Msa0724730:CDS |
| AATAGGTTATACGAGAGACG+AGG | 0.762817 | 5_1:-23804374 | Msa0724730:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGCTTTTAATAAAATTATT+TGG | - | chr5_1:23802433-23802452 | Msa0724730:intron | 10.0% |
| !!! | AATGACAATTTATTTTTTTT+TGG | - | chr5_1:23802972-23802991 | Msa0724730:intron | 10.0% |
| !! | TAAATATATATGAAAAAGAA+GGG | + | chr5_1:23805587-23805606 | None:intergenic | 10.0% |
| !! | ATAAATATATATGAAAAAGA+AGG | + | chr5_1:23805588-23805607 | None:intergenic | 10.0% |
| !! | ATGAATATTGAATTGAATAT+GGG | + | chr5_1:23801401-23801420 | None:intergenic | 15.0% |
| !! | CTAAGAATAATAATAATATC+TGG | + | chr5_1:23801447-23801466 | None:intergenic | 15.0% |
| !! | ACAATCAATAACATAATTAA+TGG | - | chr5_1:23801706-23801725 | Msa0724730:CDS | 15.0% |
| !! | TTGGTTAATTATAGAAAAAA+CGG | - | chr5_1:23802004-23802023 | Msa0724730:intron | 15.0% |
| !!! | TTATATTTGATTTAGTGTTT+TGG | - | chr5_1:23802941-23802960 | Msa0724730:intron | 15.0% |
| !! | AGTTAATGATAATTGATAAA+AGG | - | chr5_1:23803230-23803249 | Msa0724730:intron | 15.0% |
| !! | AAAATATATAGATTGTTAAG+AGG | + | chr5_1:23803578-23803597 | None:intergenic | 15.0% |
| !! | CAAAAATATAAACAAATTCA+GGG | + | chr5_1:23804106-23804125 | None:intergenic | 15.0% |
| !! | ACAAAAATATAAACAAATTC+AGG | + | chr5_1:23804107-23804126 | None:intergenic | 15.0% |
| !!! | AAACATTTTCTCAAATTAAT+AGG | - | chr5_1:23805335-23805354 | Msa0724730:intron | 15.0% |
| !!! | AACATTTTCTCAAATTAATA+GGG | - | chr5_1:23805336-23805355 | Msa0724730:intron | 15.0% |
| !! | AAATATATATGAAAAAGAAG+GGG | + | chr5_1:23805586-23805605 | None:intergenic | 15.0% |
| !!! | TCACTTTTTTTTTTTTCAAA+TGG | + | chr5_1:23805618-23805637 | None:intergenic | 15.0% |
| !! | GATGAATATTGAATTGAATA+TGG | + | chr5_1:23801402-23801421 | None:intergenic | 20.0% |
| !!! | TGAATCATGATTTTATGTTT+CGG | - | chr5_1:23802158-23802177 | Msa0724730:intron | 20.0% |
| !!! | TTTATGCATTGATTAGTATT+CGG | - | chr5_1:23802346-23802365 | Msa0724730:intron | 20.0% |
| !! | AGTAGAAAATAATAGACTAT+TGG | - | chr5_1:23803602-23803621 | Msa0724730:intron | 20.0% |
| !! | TTTAACTATGAATCAATAGA+TGG | - | chr5_1:23803674-23803693 | Msa0724730:intron | 20.0% |
| !!! | TTTCATTATGTTAGTTTCTA+TGG | - | chr5_1:23803715-23803734 | Msa0724730:intron | 20.0% |
| !! | TACATAATATCATACAGATT+TGG | - | chr5_1:23803817-23803836 | Msa0724730:intron | 20.0% |
| !!! | TGGTAATACACTTTTTTTTT+TGG | - | chr5_1:23804427-23804446 | Msa0724730:intron | 20.0% |
| !!! | GGTAATACACTTTTTTTTTT+GGG | - | chr5_1:23804428-23804447 | Msa0724730:intron | 20.0% |
| !!! | GTAATACACTTTTTTTTTTG+GGG | - | chr5_1:23804429-23804448 | Msa0724730:intron | 20.0% |
| !! | AAATAAATCATAGACATTTG+AGG | + | chr5_1:23804760-23804779 | None:intergenic | 20.0% |
| !! | TTGATATATTTCATTGTTTC+CGG | - | chr5_1:23805091-23805110 | Msa0724730:intron | 20.0% |
| !! | TTATACAAAACCATGAAAAT+AGG | - | chr5_1:23805265-23805284 | Msa0724730:intron | 20.0% |
| !!! | TCTAATATTTTCATTGTTTC+AGG | + | chr5_1:23805400-23805419 | None:intergenic | 20.0% |
| !! | AATATATATGAAAAAGAAGG+GGG | + | chr5_1:23805585-23805604 | None:intergenic | 20.0% |
| !!! | ATTTTTAAATTGCAGGATTT+TGG | - | chr5_1:23805778-23805797 | Msa0724730:intron | 20.0% |
| !!! | TTTTAGTTCCATAAGTTATA+TGG | - | chr5_1:23805864-23805883 | Msa0724730:intron | 20.0% |
| !! | AGAAAATAGAAATGATAGTT+TGG | + | chr5_1:23806126-23806145 | None:intergenic | 20.0% |
| !!! | AACTATCATTTCTATTTTCT+AGG | - | chr5_1:23806126-23806145 | Msa0724730:intron | 20.0% |
| !!! | GATAGTTATAATGAGATTTT+GGG | + | chr5_1:23806218-23806237 | None:intergenic | 20.0% |
| !!! | TGATAGTTATAATGAGATTT+TGG | + | chr5_1:23806219-23806238 | None:intergenic | 20.0% |
| !! | TCATTATAACTATCATTTCT+AGG | - | chr5_1:23806224-23806243 | Msa0724730:intron | 20.0% |
| !!! | ATACACCTTTTAAAATTACA+CGG | + | chr5_1:23806378-23806397 | None:intergenic | 20.0% |
| !! | ATCATCCAAAATAACTAATA+AGG | + | chr5_1:23806527-23806546 | None:intergenic | 20.0% |
| !!! | TCCATATTTTATGGAAATTT+CGG | - | chr5_1:23806842-23806861 | Msa0724730:CDS | 20.0% |
| ! | GAATTGAATATGGGAAAATA+GGG | + | chr5_1:23801392-23801411 | None:intergenic | 25.0% |
| ! | TGAATTGAATATGGGAAAAT+AGG | + | chr5_1:23801393-23801412 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTCTTTTGAGTAT+GGG | + | chr5_1:23801506-23801525 | None:intergenic | 25.0% |
| !! | ATTTGTTTAGTTTAGACCAT+AGG | + | chr5_1:23801563-23801582 | None:intergenic | 25.0% |
| !! | TTCAAGTTCCGTTAAAATTA+AGG | - | chr5_1:23802104-23802123 | Msa0724730:intron | 25.0% |
| ! | TCAAGTTCCGTTAAAATTAA+GGG | - | chr5_1:23802105-23802124 | Msa0724730:intron | 25.0% |
| !! | CCAAAAACCCTTAATTTTAA+CGG | + | chr5_1:23802115-23802134 | None:intergenic | 25.0% |
| !!! | TTAAAATTAAGGGTTTTTGG+TGG | - | chr5_1:23802115-23802134 | Msa0724730:intron | 25.0% |
| ! | TTTGTATTAGCACAAAATCA+CGG | + | chr5_1:23802682-23802701 | None:intergenic | 25.0% |
| !!! | TCGAAGTTTTAACTAAATCA+CGG | - | chr5_1:23802777-23802796 | Msa0724730:intron | 25.0% |
| !! | TTAAAGCACTAATTCATGTT+TGG | + | chr5_1:23802843-23802862 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr5_1:23803297-23803316 | None:intergenic | 25.0% |
| !! | ACTAAATTTGAATACTGACT+TGG | - | chr5_1:23803493-23803512 | Msa0724730:intron | 25.0% |
| !!! | ACAATGTGATTTGATTTGAT+TGG | - | chr5_1:23803528-23803547 | Msa0724730:intron | 25.0% |
| ! | ACAGATAATCAATTAATCCA+TGG | + | chr5_1:23803555-23803574 | None:intergenic | 25.0% |
| ! | GAAAATAATAGACTATTGGT+TGG | - | chr5_1:23803606-23803625 | Msa0724730:intron | 25.0% |
| ! | AAAATCTTTACACGTCTTAT+TGG | + | chr5_1:23803656-23803675 | None:intergenic | 25.0% |
| ! | TCTTGGTAAATATGAGTTAT+TGG | + | chr5_1:23804289-23804308 | None:intergenic | 25.0% |
| !! | AAAACACAATCTGAAATTCT+TGG | + | chr5_1:23804306-23804325 | None:intergenic | 25.0% |
| ! | CTTATTGCTTATACAGATAA+GGG | - | chr5_1:23804494-23804513 | Msa0724730:intron | 25.0% |
| !!! | AAAGCTTTGAATTTGTTTAC+TGG | - | chr5_1:23804600-23804619 | Msa0724730:CDS | 25.0% |
| !!! | TCTATGATTTATTTTCTGTC+AGG | - | chr5_1:23804766-23804785 | Msa0724730:CDS | 25.0% |
| !!! | AAATAGTTTTTTGTTGGTCT+GGG | - | chr5_1:23804862-23804881 | Msa0724730:CDS | 25.0% |
| !! | CTAACGCAAATTTTATGAAA+TGG | + | chr5_1:23804958-23804977 | None:intergenic | 25.0% |
| !!! | GTTAGTTTTACTTGTTAACA+AGG | - | chr5_1:23804973-23804992 | Msa0724730:intron | 25.0% |
| !! | CATTTTCTTTCCTATTTTCA+TGG | + | chr5_1:23805278-23805297 | None:intergenic | 25.0% |
| ! | CATGAAAATAGGAAAGAAAA+TGG | - | chr5_1:23805276-23805295 | Msa0724730:intron | 25.0% |
| ! | TTCAGGAACTATAAAGATAA+TGG | + | chr5_1:23805383-23805402 | None:intergenic | 25.0% |
| !!! | TAAGAGTGTTTTATGCTTTT+TGG | - | chr5_1:23805471-23805490 | Msa0724730:intron | 25.0% |
| !!! | TATGCTTTTTGGTTTAGTTT+TGG | - | chr5_1:23805482-23805501 | Msa0724730:intron | 25.0% |
| ! | ATATATATGAAAAAGAAGGG+GGG | + | chr5_1:23805584-23805603 | None:intergenic | 25.0% |
| ! | ATCCTGCAATTTAAAAATGA+GGG | + | chr5_1:23805776-23805795 | None:intergenic | 25.0% |
| ! | AATCCTGCAATTTAAAAATG+AGG | + | chr5_1:23805777-23805796 | None:intergenic | 25.0% |
| ! | ATAACTTATGGAACTAAAAG+TGG | + | chr5_1:23805863-23805882 | None:intergenic | 25.0% |
| ! | TTACATGATCACAATACATA+TGG | - | chr5_1:23805962-23805981 | Msa0724730:intron | 25.0% |
| ! | TACATGATCACAATACATAT+GGG | - | chr5_1:23805963-23805982 | Msa0724730:intron | 25.0% |
| ! | TGTACAAGGGAAAAATATTA+AGG | - | chr5_1:23806022-23806041 | Msa0724730:intron | 25.0% |
| !!! | TCATATTTGCTTGTTTTTAC+TGG | - | chr5_1:23806178-23806197 | Msa0724730:intron | 25.0% |
| ! | TGTCAATCTTGAATACAATT+GGG | + | chr5_1:23806328-23806347 | None:intergenic | 25.0% |
| !! | TCCATCCTTATTAGTTATTT+TGG | - | chr5_1:23806519-23806538 | Msa0724730:CDS | 25.0% |
| ! | TCCAAAATAACTAATAAGGA+TGG | + | chr5_1:23806523-23806542 | None:intergenic | 25.0% |
| ! | TTAGGATAACAAAATATCGA+AGG | + | chr5_1:23806592-23806611 | None:intergenic | 25.0% |
| ! | GAAATTTCCATAAAATATGG+AGG | + | chr5_1:23806843-23806862 | None:intergenic | 25.0% |
| ! | ACCGAAATTTCCATAAAATA+TGG | + | chr5_1:23806846-23806865 | None:intergenic | 25.0% |
| !!! | TCTATATTCCTCGTTTTTAT+AGG | + | chr5_1:23806953-23806972 | None:intergenic | 25.0% |
| ! | TACAATTACAATTGACAATG+TGG | + | chr5_1:23807247-23807266 | None:intergenic | 25.0% |
| ! | AAAAACTAAACATTCTCTGT+TGG | - | chr5_1:23807274-23807293 | Msa0724730:five_prime_UTR | 25.0% |
| !!! | AACCTTAACTTTGTTTTTAC+AGG | - | chr5_1:23807391-23807410 | Msa0724730:five_prime_UTR | 25.0% |
| ! | ATCCTGTAAAAACAAAGTTA+AGG | + | chr5_1:23807396-23807415 | None:intergenic | 25.0% |
| ATAATATCTGGTGAAAGTTG+TGG | + | chr5_1:23801435-23801454 | None:intergenic | 30.0% | |
| !! | TTTCTTTTGAGTATGGGATT+GGG | + | chr5_1:23801500-23801519 | None:intergenic | 30.0% |
| !! | TTTTCTTTTGAGTATGGGAT+TGG | + | chr5_1:23801501-23801520 | None:intergenic | 30.0% |
| !!! | GGTGTTTTTTCTTTTGAGTA+TGG | + | chr5_1:23801507-23801526 | None:intergenic | 30.0% |
| TTGAAATAAGTGCTTAGTTG+TGG | + | chr5_1:23801614-23801633 | None:intergenic | 30.0% | |
| ACAGTTAAGAAAACCCAAAA+CGG | + | chr5_1:23802034-23802053 | None:intergenic | 30.0% | |
| !! | CCACTTTTAACACAAAAAAC+CGG | + | chr5_1:23802061-23802080 | None:intergenic | 30.0% |
| ! | CCGTTAAAATTAAGGGTTTT+TGG | - | chr5_1:23802112-23802131 | Msa0724730:intron | 30.0% |
| !!! | ATTTTATGTTTCGGTGTTGT+CGG | - | chr5_1:23802167-23802186 | Msa0724730:intron | 30.0% |
| ! | AGAAGTTTGTTCTGATAGTT+TGG | - | chr5_1:23802192-23802211 | Msa0724730:intron | 30.0% |
| CAATGCACTAAGTAAATGTT+TGG | + | chr5_1:23802491-23802510 | None:intergenic | 30.0% | |
| ACTAATTCATGTTTGGACTT+TGG | + | chr5_1:23802836-23802855 | None:intergenic | 30.0% | |
| TATTACGCTTTCTGTCTATA+AGG | - | chr5_1:23803063-23803082 | Msa0724730:intron | 30.0% | |
| AAGGATGTGAAGACAAAATA+TGG | - | chr5_1:23803249-23803268 | Msa0724730:intron | 30.0% | |
| GAAGACAAAATATGGTTTAG+AGG | - | chr5_1:23803257-23803276 | Msa0724730:intron | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr5_1:23803301-23803320 | Msa0724730:intron | 30.0% |
| TGTAAAGAAGTTCACACATT+TGG | - | chr5_1:23803415-23803434 | Msa0724730:intron | 30.0% | |
| GTAAAGAAGTTCACACATTT+GGG | - | chr5_1:23803416-23803435 | Msa0724730:intron | 30.0% | |
| TTCAAATTTAGTCCCTCAAA+GGG | + | chr5_1:23803485-23803504 | None:intergenic | 30.0% | |
| ATTCAAATTTAGTCCCTCAA+AGG | + | chr5_1:23803486-23803505 | None:intergenic | 30.0% | |
| ! | TCTTCCTTGATTATTTCTCT+TGG | - | chr5_1:23803995-23804014 | Msa0724730:intron | 30.0% |
| TCTACCAAGAGAAATAATCA+AGG | + | chr5_1:23804002-23804021 | None:intergenic | 30.0% | |
| !! | ATTTGATGGTGTTTGACATA+AGG | - | chr5_1:23804255-23804274 | Msa0724730:intron | 30.0% |
| AATTACCATGTTGTCTGAAT+AGG | - | chr5_1:23804327-23804346 | Msa0724730:CDS | 30.0% | |
| TATAACCTATTCAGACAACA+TGG | + | chr5_1:23804335-23804354 | None:intergenic | 30.0% | |
| GGAACTTAGATCAATGTAAA+TGG | - | chr5_1:23804450-23804469 | Msa0724730:intron | 30.0% | |
| !! | ATCAATGTAAATGGACTATG+TGG | - | chr5_1:23804459-23804478 | Msa0724730:intron | 30.0% |
| CCTTATCTGTATAAGCAATA+AGG | + | chr5_1:23804496-23804515 | None:intergenic | 30.0% | |
| CCTTATTGCTTATACAGATA+AGG | - | chr5_1:23804493-23804512 | Msa0724730:intron | 30.0% | |
| !! | CAGTACGTATTTTGAATTAC+AGG | - | chr5_1:23804544-23804563 | Msa0724730:CDS | 30.0% |
| !! | TCCATTCATTTTTATCTCTG+CGG | - | chr5_1:23804575-23804594 | Msa0724730:CDS | 30.0% |
| CAATTCACACAACATTTAAC+AGG | - | chr5_1:23804634-23804653 | Msa0724730:intron | 30.0% | |
| TAGTTCAACTAAGAAATAGC+TGG | + | chr5_1:23804733-23804752 | None:intergenic | 30.0% | |
| !! | ATTTATTTTCTGTCAGGCAT+CGG | - | chr5_1:23804772-23804791 | Msa0724730:CDS | 30.0% |
| !! | AGTTGAAGTATCTGCTTTTA+TGG | - | chr5_1:23804806-23804825 | Msa0724730:CDS | 30.0% |
| CAAAAAACTATTTGTGCTCA+AGG | + | chr5_1:23804855-23804874 | None:intergenic | 30.0% | |
| !!! | GAGCACAAATAGTTTTTTGT+TGG | - | chr5_1:23804856-23804875 | Msa0724730:CDS | 30.0% |
| !!! | CAAATAGTTTTTTGTTGGTC+TGG | - | chr5_1:23804861-23804880 | Msa0724730:CDS | 30.0% |
| !! | TTGGCTTTGTAGTTTCTTAA+AGG | - | chr5_1:23805501-23805520 | Msa0724730:intron | 30.0% |
| !!! | GTTTCTTAAAGGCTTTTTTC+TGG | - | chr5_1:23805512-23805531 | Msa0724730:intron | 30.0% |
| !! | TCTGCTTTTCATTTGTATTG+TGG | - | chr5_1:23805549-23805568 | Msa0724730:intron | 30.0% |
| AAACAGAAAGAGTTAGTAGT+TGG | - | chr5_1:23805687-23805706 | Msa0724730:intron | 30.0% | |
| AACAGAAAGAGTTAGTAGTT+GGG | - | chr5_1:23805688-23805707 | Msa0724730:intron | 30.0% | |
| ATAGCACAATCATGATACTT+GGG | + | chr5_1:23805747-23805766 | None:intergenic | 30.0% | |
| AATAGCACAATCATGATACT+TGG | + | chr5_1:23805748-23805767 | None:intergenic | 30.0% | |
| !!! | GTATCATGATTGTGCTATTT+TGG | - | chr5_1:23805749-23805768 | Msa0724730:intron | 30.0% |
| TAGCATGACCATATAACTTA+TGG | + | chr5_1:23805875-23805894 | None:intergenic | 30.0% | |
| ! | GTTATATGGTCATGCTATTT+CGG | - | chr5_1:23805878-23805897 | Msa0724730:intron | 30.0% |
| ATACATATGGGACTAAAAGT+TGG | - | chr5_1:23805975-23805994 | Msa0724730:intron | 30.0% | |
| AAAAGTTGGAGAAAATCAAC+AGG | - | chr5_1:23805989-23806008 | Msa0724730:intron | 30.0% | |
| !!! | AGGACTTCTTTTTTGTACAA+GGG | - | chr5_1:23806009-23806028 | Msa0724730:intron | 30.0% |
| AAAATCAAGCAATTGAGAAG+TGG | - | chr5_1:23806048-23806067 | Msa0724730:intron | 30.0% | |
| ! | TCATTTCTATTTTCTAGGCT+TGG | - | chr5_1:23806131-23806150 | Msa0724730:intron | 30.0% |
| ! | ATAACTATCATTTCTAGGCT+TGG | - | chr5_1:23806229-23806248 | Msa0724730:intron | 30.0% |
| GTCAATCTTGAATACAATTG+GGG | + | chr5_1:23806327-23806346 | None:intergenic | 30.0% | |
| CTGTCAATCTTGAATACAAT+TGG | + | chr5_1:23806329-23806348 | None:intergenic | 30.0% | |
| ! | GATCACCGTGTAATTTTAAA+AGG | - | chr5_1:23806370-23806389 | Msa0724730:intron | 30.0% |
| !! | AGAATAGAGTTGATGTAATC+TGG | - | chr5_1:23806434-23806453 | Msa0724730:intron | 30.0% |
| GAATTAAAACTACAAAGCCA+GGG | + | chr5_1:23806644-23806663 | None:intergenic | 30.0% | |
| AGAATTAAAACTACAAAGCC+AGG | + | chr5_1:23806645-23806664 | None:intergenic | 30.0% | |
| CTCAACTGTTACAAGTTAAT+CGG | - | chr5_1:23806663-23806682 | Msa0724730:CDS | 30.0% | |
| GCATGAAACATAACCATATA+TGG | + | chr5_1:23806701-23806720 | None:intergenic | 30.0% | |
| !! | GTGCTGTTTAAATTTGTTCA+CGG | - | chr5_1:23806739-23806758 | Msa0724730:CDS | 30.0% |
| ! | GGATCCATTTTATGCATTTT+GGG | - | chr5_1:23806760-23806779 | Msa0724730:CDS | 30.0% |
| !! | AAGCTTTAAGTGCCATATAT+GGG | - | chr5_1:23806788-23806807 | Msa0724730:CDS | 30.0% |
| ! | TCGCTAAATTCTGTTTGTTA+AGG | - | chr5_1:23806894-23806913 | Msa0724730:CDS | 30.0% |
| TTCATCAAAGACATAGTCAT+AGG | - | chr5_1:23807056-23807075 | Msa0724730:five_prime_UTR | 30.0% | |
| !! | AGATTGATGATTTTTCTCGA+TGG | + | chr5_1:23807166-23807185 | None:intergenic | 30.0% |
| AACTATAGAAAGATGAGATG+TGG | + | chr5_1:23807358-23807377 | None:intergenic | 30.0% | |
| !! | TTCTTTTGAGTATGGGATTG+GGG | + | chr5_1:23801499-23801518 | None:intergenic | 35.0% |
| ! | GAATGAGGTTTTTGTCAAGT+TGG | + | chr5_1:23801541-23801560 | None:intergenic | 35.0% |
| TGACAAAAACCTCATTCCTA+TGG | - | chr5_1:23801544-23801563 | Msa0724730:three_prime_UTR | 35.0% | |
| TAGTTTAGACCATAGGAATG+AGG | + | chr5_1:23801556-23801575 | None:intergenic | 35.0% | |
| AATAAGTGCTTAGTTGTGGA+TGG | + | chr5_1:23801610-23801629 | None:intergenic | 35.0% | |
| TAGAGTCCAAAAAGTTCACA+TGG | - | chr5_1:23801645-23801664 | Msa0724730:three_prime_UTR | 35.0% | |
| AGAGTCCAAAAAGTTCACAT+GGG | - | chr5_1:23801646-23801665 | Msa0724730:three_prime_UTR | 35.0% | |
| ! | GGTTTTCTTAACTGTTTGTC+CGG | - | chr5_1:23802039-23802058 | Msa0724730:intron | 35.0% |
| !!! | CCGGTTTTTTGTGTTAAAAG+TGG | - | chr5_1:23802058-23802077 | Msa0724730:intron | 35.0% |
| !!! | AAATTAAGGGTTTTTGGTGG+TGG | - | chr5_1:23802118-23802137 | Msa0724730:intron | 35.0% |
| GATTAGTATTCGGACATGTT+TGG | - | chr5_1:23802356-23802375 | Msa0724730:intron | 35.0% | |
| ! | GCTGTGGAATTTTGCAATTT+CGG | - | chr5_1:23802523-23802542 | Msa0724730:intron | 35.0% |
| TGCTAATACAAACATGCACT+TGG | - | chr5_1:23802690-23802709 | Msa0724730:intron | 35.0% | |
| TTCATGTTTGGACTTTGGAT+TGG | + | chr5_1:23802831-23802850 | None:intergenic | 35.0% | |
| CTTGGAAAGCTACACTTATT+AGG | - | chr5_1:23802898-23802917 | Msa0724730:intron | 35.0% | |
| GCTGATCTATTCAGAAAGTA+AGG | + | chr5_1:23803011-23803030 | None:intergenic | 35.0% | |
| ATCCATGTAAGCAACTTATG+TGG | - | chr5_1:23803138-23803157 | Msa0724730:intron | 35.0% | |
| CAACTTATGTGGCATTAATG+AGG | - | chr5_1:23803149-23803168 | Msa0724730:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr5_1:23803281-23803300 | Msa0724730:intron | 35.0% |
| TCAAATTTAGTCCCTCAAAG+GGG | + | chr5_1:23803484-23803503 | None:intergenic | 35.0% | |
| !! | GATTTGATTTGATTGGTCCA+TGG | - | chr5_1:23803535-23803554 | Msa0724730:intron | 35.0% |
| ! | TTAGTTTCTATGGTCCCTTT+TGG | - | chr5_1:23803725-23803744 | Msa0724730:intron | 35.0% |
| ATGGACAAATGCACAATCAT+TGG | + | chr5_1:23803759-23803778 | None:intergenic | 35.0% | |
| CCAAATAGAACCAAATCACA+TGG | + | chr5_1:23803778-23803797 | None:intergenic | 35.0% | |
| !! | CCATGTGATTTGGTTCTATT+TGG | - | chr5_1:23803775-23803794 | Msa0724730:intron | 35.0% |
| AGTACCTGTCAATTTCATGA+AGG | + | chr5_1:23804195-23804214 | None:intergenic | 35.0% | |
| TAGTAGCCATGCAAATTTGA+TGG | - | chr5_1:23804241-23804260 | Msa0724730:intron | 35.0% | |
| CAAACACCATCAAATTTGCA+TGG | + | chr5_1:23804250-23804269 | None:intergenic | 35.0% | |
| CACCTAAAAATCTACAGTTG+CGG | + | chr5_1:23804377-23804396 | None:intergenic | 35.0% | |
| ACCGCAGAGATAAAAATGAA+TGG | + | chr5_1:23804579-23804598 | None:intergenic | 35.0% | |
| TCACACAACATTTAACAGGA+AGG | - | chr5_1:23804638-23804657 | Msa0724730:intron | 35.0% | |
| ! | GGAAGGATAAAAGCTCATTT+TGG | - | chr5_1:23804655-23804674 | Msa0724730:intron | 35.0% |
| TTCTTCACATATCACCTGTT+CGG | - | chr5_1:23804682-23804701 | Msa0724730:intron | 35.0% | |
| TGATTTACCGATACAAGAGT+TGG | - | chr5_1:23804889-23804908 | Msa0724730:intron | 35.0% | |
| GATTTACCGATACAAGAGTT+GGG | - | chr5_1:23804890-23804909 | Msa0724730:intron | 35.0% | |
| ! | TTTAAAGCGAGTCATTGTGA+TGG | - | chr5_1:23805008-23805027 | Msa0724730:intron | 35.0% |
| AAAAGCTAAAATCCTAGCCA+GGG | - | chr5_1:23805033-23805052 | Msa0724730:intron | 35.0% | |
| TTTCCGGAAATGTAAGACAA+TGG | - | chr5_1:23805107-23805126 | Msa0724730:intron | 35.0% | |
| GAACCATTGTCTTACATTTC+CGG | + | chr5_1:23805113-23805132 | None:intergenic | 35.0% | |
| TTTATATCCTGATGAGACTC+TGG | - | chr5_1:23805432-23805451 | Msa0724730:intron | 35.0% | |
| AAACACTCTTAGTGAGAACA+AGG | + | chr5_1:23805462-23805481 | None:intergenic | 35.0% | |
| ACAAATGAAAAGCAGAGTAC+AGG | + | chr5_1:23805545-23805564 | None:intergenic | 35.0% | |
| ACAGAAAGAGTTAGTAGTTG+GGG | - | chr5_1:23805689-23805708 | Msa0724730:intron | 35.0% | |
| AAAGCAAGGTAAAGCCTAAT+AGG | + | chr5_1:23805717-23805736 | None:intergenic | 35.0% | |
| TAGCACAATCATGATACTTG+GGG | + | chr5_1:23805746-23805765 | None:intergenic | 35.0% | |
| !! | GTCCCTCATTTTTAAATTGC+AGG | - | chr5_1:23805771-23805790 | Msa0724730:intron | 35.0% |
| GGAATTTGAGGGAAAATCAA+GGG | + | chr5_1:23805838-23805857 | None:intergenic | 35.0% | |
| TAAAAGTGGAGGGAATTTGA+GGG | + | chr5_1:23805849-23805868 | None:intergenic | 35.0% | |
| CTTATGGAACTAAAAGTGGA+GGG | + | chr5_1:23805859-23805878 | None:intergenic | 35.0% | |
| ACTTATGGAACTAAAAGTGG+AGG | + | chr5_1:23805860-23805879 | None:intergenic | 35.0% | |
| !!! | CAGGACTTCTTTTTTGTACA+AGG | - | chr5_1:23806008-23806027 | Msa0724730:intron | 35.0% |
| GAAGGCTTAAGTGTAAGTTT+AGG | + | chr5_1:23806574-23806593 | None:intergenic | 35.0% | |
| ! | GCTGAATTAGCTTCCATATA+TGG | - | chr5_1:23806685-23806704 | Msa0724730:CDS | 35.0% |
| ! | GTTTCATGCTTTTGTCTGTA+TGG | - | chr5_1:23806712-23806731 | Msa0724730:CDS | 35.0% |
| ! | CGGATCCATTTTATGCATTT+TGG | - | chr5_1:23806759-23806778 | Msa0724730:CDS | 35.0% |
| GCTTCCCAAAATGCATAAAA+TGG | + | chr5_1:23806767-23806786 | None:intergenic | 35.0% | |
| !! | GAAGCTTTAAGTGCCATATA+TGG | - | chr5_1:23806787-23806806 | Msa0724730:CDS | 35.0% |
| ! | TGACAGTCCTCCATATTTTA+TGG | - | chr5_1:23806833-23806852 | Msa0724730:CDS | 35.0% |
| TGTTAAGGTAGCATACTTTG+TGG | - | chr5_1:23806909-23806928 | Msa0724730:CDS | 35.0% | |
| GTTAAGGTAGCATACTTTGT+GGG | - | chr5_1:23806910-23806929 | Msa0724730:CDS | 35.0% | |
| ! | ACACTAAGCTGTTTCATATC+AGG | + | chr5_1:23806988-23807007 | None:intergenic | 35.0% |
| TGATATGAAACAGCTTAGTG+TGG | - | chr5_1:23806987-23807006 | Msa0724730:CDS | 35.0% | |
| CATAGTCATAGGATTACTGA+TGG | - | chr5_1:23807067-23807086 | Msa0724730:five_prime_UTR | 35.0% | |
| CCATATATTATACGTGCCAA+AGG | + | chr5_1:23807104-23807123 | None:intergenic | 35.0% | |
| CCTTTGGCACGTATAATATA+TGG | - | chr5_1:23807101-23807120 | Msa0724730:five_prime_UTR | 35.0% | |
| AGTTATCGTTGAGATGATAG+AGG | - | chr5_1:23807191-23807210 | Msa0724730:five_prime_UTR | 35.0% | |
| GTTATCGTTGAGATGATAGA+GGG | - | chr5_1:23807192-23807211 | Msa0724730:five_prime_UTR | 35.0% | |
| ACTACCAAATGGAGAAAGGT+GGG | + | chr5_1:23801315-23801334 | None:intergenic | 40.0% | |
| CTAGACTACCAAATGGAGAA+AGG | + | chr5_1:23801319-23801338 | None:intergenic | 40.0% | |
| TGTGTGACTAGACTACCAAA+TGG | + | chr5_1:23801326-23801345 | None:intergenic | 40.0% | |
| GGGATTGTGTGAACTAAGAA+GGG | + | chr5_1:23801372-23801391 | None:intergenic | 40.0% | |
| AGGGATTGTGTGAACTAAGA+AGG | + | chr5_1:23801373-23801392 | None:intergenic | 40.0% | |
| !!! | TTTTGTCAAGTTGGCATGGT+TGG | + | chr5_1:23801532-23801551 | None:intergenic | 40.0% |
| !!! | AGGTTTTTGTCAAGTTGGCA+TGG | + | chr5_1:23801536-23801555 | None:intergenic | 40.0% |
| ! | GCAATCCCATGTGAACTTTT+TGG | + | chr5_1:23801654-23801673 | None:intergenic | 40.0% |
| ! | TGTTCTGCTGCTTCTTCTAT+TGG | + | chr5_1:23801683-23801702 | None:intergenic | 40.0% |
| TTGGGTGGTTTGAAAGTGAT+GGG | + | chr5_1:23801826-23801845 | None:intergenic | 40.0% | |
| ATTGGGTGGTTTGAAAGTGA+TGG | + | chr5_1:23801827-23801846 | None:intergenic | 40.0% | |
| TGGAAATTCGTGAAGCTGTA+AGG | - | chr5_1:23801957-23801976 | Msa0724730:intron | 40.0% | |
| GGAAATTCGTGAAGCTGTAA+GGG | - | chr5_1:23801958-23801977 | Msa0724730:intron | 40.0% | |
| TTCTTCCAGGAATCAAGTGT+TGG | - | chr5_1:23802234-23802253 | Msa0724730:intron | 40.0% | |
| CAAATCCAACACTTGATTCC+TGG | + | chr5_1:23802242-23802261 | None:intergenic | 40.0% | |
| !! | CAGGAATCAAGTGTTGGATT+TGG | - | chr5_1:23802240-23802259 | Msa0724730:intron | 40.0% |
| ! | ATGATGATGATGTCACTGGT+TGG | - | chr5_1:23802272-23802291 | Msa0724730:intron | 40.0% |
| TGTGATTCTGTCAAAGTCAG+TGG | - | chr5_1:23802461-23802480 | Msa0724730:intron | 40.0% | |
| GTGATTCTGTCAAAGTCAGT+GGG | - | chr5_1:23802462-23802481 | Msa0724730:intron | 40.0% | |
| !! | ATTGATGACGAGTAATGCTG+TGG | - | chr5_1:23802507-23802526 | Msa0724730:intron | 40.0% |
| TGTCGTTGTTATGTGCACTA+TGG | - | chr5_1:23802608-23802627 | Msa0724730:intron | 40.0% | |
| AAATCGCAATGAATTCACCG+TGG | + | chr5_1:23802741-23802760 | None:intergenic | 40.0% | |
| ! | CGGTGAATTCATTGCGATTT+TGG | - | chr5_1:23802741-23802760 | Msa0724730:intron | 40.0% |
| GTAGCTTTCCAAGTGTAGTT+GGG | + | chr5_1:23802891-23802910 | None:intergenic | 40.0% | |
| TGTAGCTTTCCAAGTGTAGT+TGG | + | chr5_1:23802892-23802911 | None:intergenic | 40.0% | |
| TGCCACATAAGTTGCTTACA+TGG | + | chr5_1:23803143-23803162 | None:intergenic | 40.0% | |
| TGTGCAGCAGAATAGCATAA+AGG | + | chr5_1:23803194-23803213 | None:intergenic | 40.0% | |
| TGGTTTAGAGGTCAATGAGT+TGG | - | chr5_1:23803269-23803288 | Msa0724730:intron | 40.0% | |
| CATTGGACAAGAGACCAAAA+GGG | + | chr5_1:23803742-23803761 | None:intergenic | 40.0% | |
| TCATTGGACAAGAGACCAAA+AGG | + | chr5_1:23803743-23803762 | None:intergenic | 40.0% | |
| GTGCATTTGTCCATGTGATT+TGG | - | chr5_1:23803765-23803784 | Msa0724730:intron | 40.0% | |
| CACAGAAAAGATGTTGTCCA+TGG | + | chr5_1:23803897-23803916 | None:intergenic | 40.0% | |
| !! | AAATGTGGATTAGTTCTGCG+AGG | + | chr5_1:23804140-23804159 | None:intergenic | 40.0% |
| GCATAAACAATAGGCATGTC+TGG | + | chr5_1:23804164-23804183 | None:intergenic | 40.0% | |
| AATAGGTTATACGAGAGACG+AGG | - | chr5_1:23804344-23804363 | Msa0724730:CDS | 40.0% | |
| TTATACGAGAGACGAGGTAT+TGG | - | chr5_1:23804350-23804369 | Msa0724730:CDS | 40.0% | |
| ! | TATACGAGAGACGAGGTATT+GGG | - | chr5_1:23804351-23804370 | Msa0724730:CDS | 40.0% |
| !! | CGCAACTGTAGATTTTTAGG+TGG | - | chr5_1:23804375-23804394 | Msa0724730:intron | 40.0% |
| TCTTCACATATCACCTGTTC+GGG | - | chr5_1:23804683-23804702 | Msa0724730:intron | 40.0% | |
| AGCTTTCCCAACTCTTGTAT+CGG | + | chr5_1:23804899-23804918 | None:intergenic | 40.0% | |
| TACAAGAGTTGGGAAAGCTA+AGG | - | chr5_1:23804900-23804919 | Msa0724730:intron | 40.0% | |
| GAAAAGCTAAAATCCTAGCC+AGG | - | chr5_1:23805032-23805051 | Msa0724730:intron | 40.0% | |
| TTCCTGAAATAGATCATCCC+TGG | + | chr5_1:23805053-23805072 | None:intergenic | 40.0% | |
| ACTTGGGGAAACTAAAAGCA+AGG | + | chr5_1:23805731-23805750 | None:intergenic | 40.0% | |
| ! | GGGACTCTTTTATTGCACAA+AGG | + | chr5_1:23805818-23805837 | None:intergenic | 40.0% |
| GGGAATTTGAGGGAAAATCA+AGG | + | chr5_1:23805839-23805858 | None:intergenic | 40.0% | |
| CTAAAAGTGGAGGGAATTTG+AGG | + | chr5_1:23805850-23805869 | None:intergenic | 40.0% | |
| TTAGTCCTCCACTTCTCAAT+TGG | + | chr5_1:23805940-23805959 | None:intergenic | 40.0% | |
| ATCAAGCAATTGAGAAGTGG+AGG | - | chr5_1:23806051-23806070 | Msa0724730:intron | 40.0% | |
| ! | TCTAGGCTTGGTTGTTTAGA+AGG | - | chr5_1:23806241-23806260 | Msa0724730:intron | 40.0% |
| ! | GGTTACTAAGTTAAGCGTTG+TGG | - | chr5_1:23806455-23806474 | Msa0724730:CDS | 40.0% |
| GCTTAAGTGTAAGTTTAGGC+AGG | + | chr5_1:23806570-23806589 | None:intergenic | 40.0% | |
| GCAGAAGTGAAACCCATATA+TGG | + | chr5_1:23806803-23806822 | None:intergenic | 40.0% | |
| GGAAATTTCGGTAACAGTGT+CGG | - | chr5_1:23806854-23806873 | Msa0724730:CDS | 40.0% | |
| GAAATTTCGGTAACAGTGTC+GGG | - | chr5_1:23806855-23806874 | Msa0724730:CDS | 40.0% | |
| AGAAGACGCCTATAAAAACG+AGG | - | chr5_1:23806942-23806961 | Msa0724730:CDS | 40.0% | |
| ACGAGGAATATAGACAGTGT+TGG | - | chr5_1:23806959-23806978 | Msa0724730:CDS | 40.0% | |
| ATGAAACAGCTTAGTGTGGT+TGG | - | chr5_1:23806991-23807010 | Msa0724730:CDS | 40.0% | |
| AGTCATAGGATTACTGATGG+TGG | - | chr5_1:23807070-23807089 | Msa0724730:five_prime_UTR | 40.0% | |
| !!! | GATGGTGGATTTTTTGCCTT+TGG | - | chr5_1:23807085-23807104 | Msa0724730:five_prime_UTR | 40.0% |
| !!! | TCGATGGAGCAACGTTTTTT+GGG | + | chr5_1:23807150-23807169 | None:intergenic | 40.0% |
| AAATGGAGAAAGGTGGGGAA+GGG | + | chr5_1:23801309-23801328 | None:intergenic | 45.0% | |
| CTACCAAATGGAGAAAGGTG+GGG | + | chr5_1:23801314-23801333 | None:intergenic | 45.0% | |
| GACTACCAAATGGAGAAAGG+TGG | + | chr5_1:23801316-23801335 | None:intergenic | 45.0% | |
| TGGGGTGTGATGAGGAAAAT+GGG | + | chr5_1:23801481-23801500 | None:intergenic | 45.0% | |
| TTGGGGTGTGATGAGGAAAA+TGG | + | chr5_1:23801482-23801501 | None:intergenic | 45.0% | |
| !! | GTGGTTTGAAAGTGATGGGT+CGG | + | chr5_1:23801822-23801841 | None:intergenic | 45.0% |
| CGTGGCTAGCGAAGATTATT+GGG | + | chr5_1:23801844-23801863 | None:intergenic | 45.0% | |
| CGAAGTGGTTCCATGTTTCA+AGG | - | chr5_1:23801908-23801927 | Msa0724730:intron | 45.0% | |
| ! | GAGAGAAGCGAACGTTGTTT+TGG | - | chr5_1:23801985-23802004 | Msa0724730:intron | 45.0% |
| !! | AAAAAACGGCACGCCGTTTT+GGG | - | chr5_1:23802018-23802037 | Msa0724730:intron | 45.0% |
| !!! | TTAAGGGTTTTTGGTGGTGG+TGG | - | chr5_1:23802121-23802140 | Msa0724730:intron | 45.0% |
| TTCGACGTGTTTCTTCTTCC+AGG | - | chr5_1:23802221-23802240 | Msa0724730:intron | 45.0% | |
| ! | GCTGATGATGATGATGTCAC+TGG | - | chr5_1:23802268-23802287 | Msa0724730:intron | 45.0% |
| CAATGCTGCAGAACTTCACT+CGG | - | chr5_1:23802579-23802598 | Msa0724730:intron | 45.0% | |
| ATCACGGTGCAGTTGTGATT+TGG | - | chr5_1:23802793-23802812 | Msa0724730:intron | 45.0% | |
| GTTAAGCTCCCAACTACACT+TGG | - | chr5_1:23802880-23802899 | Msa0724730:intron | 45.0% | |
| ! | ATGTGTCATGCCACTTGTGT+AGG | - | chr5_1:23803092-23803111 | Msa0724730:intron | 45.0% |
| TCATGCATTGCCTACACAAG+TGG | + | chr5_1:23803105-23803124 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr5_1:23803350-23803369 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr5_1:23803351-23803370 | None:intergenic | 45.0% |
| AACCCACTATAGCCAGTTGA+CGG | - | chr5_1:23803919-23803938 | Msa0724730:intron | 45.0% | |
| ATAGGCATGTCTGGCAAATG+TGG | + | chr5_1:23804155-23804174 | None:intergenic | 45.0% | |
| GCGTCACTGGCATAAACAAT+AGG | + | chr5_1:23804173-23804192 | None:intergenic | 45.0% | |
| !! | CAATTTCATGAAGGCGTCAC+TGG | + | chr5_1:23804186-23804205 | None:intergenic | 45.0% |
| GACGCCTTCATGAAATTGAC+AGG | - | chr5_1:23804188-23804207 | Msa0724730:CDS | 45.0% | |
| ! | GGCCGCAACTGTAGATTTTT+AGG | - | chr5_1:23804372-23804391 | Msa0724730:CDS | 45.0% |
| GAAATAGATCATCCCTGGCT+AGG | + | chr5_1:23805048-23805067 | None:intergenic | 45.0% | |
| AGCCAGGGATGATCTATTTC+AGG | - | chr5_1:23805048-23805067 | Msa0724730:intron | 45.0% | |
| ! | TAGTAGTTGGGGCACCTATT+AGG | - | chr5_1:23805700-23805719 | Msa0724730:intron | 45.0% |
| CTATTTCGGTCCCTCACTTA+TGG | - | chr5_1:23805892-23805911 | Msa0724730:intron | 45.0% | |
| TCAATTGGACACAACCACGA+TGG | + | chr5_1:23805925-23805944 | None:intergenic | 45.0% | |
| GGTTGTGTCCAATTGAGAAG+TGG | - | chr5_1:23805929-23805948 | Msa0724730:intron | 45.0% | |
| TGTGTCCAATTGAGAAGTGG+AGG | - | chr5_1:23805932-23805951 | Msa0724730:intron | 45.0% | |
| TCTAGGCTTGGCTGTTAAGA+AGG | - | chr5_1:23806143-23806162 | Msa0724730:intron | 45.0% | |
| GAATACAATTGGGGAGAGCA+GGG | + | chr5_1:23806318-23806337 | None:intergenic | 45.0% | |
| TGAATACAATTGGGGAGAGC+AGG | + | chr5_1:23806319-23806338 | None:intergenic | 45.0% | |
| AGTTTAGGCAGGCAGAACAA+TGG | + | chr5_1:23806559-23806578 | None:intergenic | 45.0% | |
| !! | GTGATGGACAAGCATGGTTT+AGG | + | chr5_1:23806610-23806629 | None:intergenic | 45.0% |
| !! | AGAAGAGTGATGGACAAGCA+TGG | + | chr5_1:23806616-23806635 | None:intergenic | 45.0% |
| CAGGGAGAAAAGAAGAGTGA+TGG | + | chr5_1:23806626-23806645 | None:intergenic | 45.0% | |
| ! | CATCACTCTTCTTTTCTCCC+TGG | - | chr5_1:23806624-23806643 | Msa0724730:CDS | 45.0% |
| AGGAGTTTATCCATGTCTGC+TGG | - | chr5_1:23807033-23807052 | Msa0724730:five_prime_UTR | 45.0% | |
| CTTTGATGAACCAGCAGACA+TGG | + | chr5_1:23807046-23807065 | None:intergenic | 45.0% | |
| !!! | CGATGGAGCAACGTTTTTTG+GGG | + | chr5_1:23807149-23807168 | None:intergenic | 45.0% |
| !!! | CTCGATGGAGCAACGTTTTT+TGG | + | chr5_1:23807151-23807170 | None:intergenic | 45.0% |
| CAAATGGAGAAAGGTGGGGA+AGG | + | chr5_1:23801310-23801329 | None:intergenic | 50.0% | |
| CTTCCCCACCTTTCTCCATT+TGG | - | chr5_1:23801308-23801327 | Msa0724730:three_prime_UTR | 50.0% | |
| GGTGTGATGAGGAAAATGGG+GGG | + | chr5_1:23801478-23801497 | None:intergenic | 50.0% | |
| GGGTGTGATGAGGAAAATGG+GGG | + | chr5_1:23801479-23801498 | None:intergenic | 50.0% | |
| GGGGTGTGATGAGGAAAATG+GGG | + | chr5_1:23801480-23801499 | None:intergenic | 50.0% | |
| TATGGGATTGGGGTGTGATG+AGG | + | chr5_1:23801489-23801508 | None:intergenic | 50.0% | |
| !! | GTCAAGTTGGCATGGTTGGA+AGG | + | chr5_1:23801528-23801547 | None:intergenic | 50.0% |
| GATGGGTCGGTGATTGTGAA+TGG | + | chr5_1:23801809-23801828 | None:intergenic | 50.0% | |
| GGCTAGCGAAGATTATTGGG+TGG | + | chr5_1:23801841-23801860 | None:intergenic | 50.0% | |
| GCGTGGCTAGCGAAGATTAT+TGG | + | chr5_1:23801845-23801864 | None:intergenic | 50.0% | |
| CAGTGATGTTGAGAAACGCG+TGG | + | chr5_1:23801862-23801881 | None:intergenic | 50.0% | |
| CACGCGTTTCTCAACATCAC+TGG | - | chr5_1:23801860-23801879 | Msa0724730:intron | 50.0% | |
| GACGAAGTTCTTGGACGAAG+TGG | - | chr5_1:23801893-23801912 | Msa0724730:intron | 50.0% | |
| TGTCGCTGGACCTTGAAACA+TGG | + | chr5_1:23801921-23801940 | None:intergenic | 50.0% | |
| ! | GAAAAAACGGCACGCCGTTT+TGG | - | chr5_1:23802017-23802036 | Msa0724730:intron | 50.0% |
| !! | ACATGCACTTGGTGCGTTTG+TGG | - | chr5_1:23802701-23802720 | Msa0724730:intron | 50.0% |
| TGGTGCGTTTGTGGTGAGTT+TGG | - | chr5_1:23802710-23802729 | Msa0724730:intron | 50.0% | |
| TGGTGAGTTTGGCACAACCA+CGG | - | chr5_1:23802721-23802740 | Msa0724730:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr5_1:23803346-23803365 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr5_1:23803352-23803371 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr5_1:23803349-23803368 | Msa0724730:intron | 50.0% | |
| AACACCAGTTGCCCCTTTGA+GGG | - | chr5_1:23803470-23803489 | Msa0724730:intron | 50.0% | |
| ACCCACTATAGCCAGTTGAC+GGG | - | chr5_1:23803920-23803939 | Msa0724730:intron | 50.0% | |
| TCCCGTCAACTGGCTATAGT+GGG | + | chr5_1:23803924-23803943 | None:intergenic | 50.0% | |
| TTCCCGTCAACTGGCTATAG+TGG | + | chr5_1:23803925-23803944 | None:intergenic | 50.0% | |
| TAGCCAGTTGACGGGAAGAT+TGG | - | chr5_1:23803928-23803947 | Msa0724730:intron | 50.0% | |
| ACACCAATCTTCCCGTCAAC+TGG | + | chr5_1:23803934-23803953 | None:intergenic | 50.0% | |
| AGATGCAGCAATCCTGACGT+GGG | - | chr5_1:23803962-23803981 | Msa0724730:intron | 50.0% | |
| CAGTTGTAGTGCAGAGTCGT+CGG | + | chr5_1:23804409-23804428 | None:intergenic | 50.0% | |
| TTTCCAGTAGCATCCCGAAC+AGG | + | chr5_1:23804699-23804718 | None:intergenic | 50.0% | |
| TGTTCGGGATGCTACTGGAA+AGG | - | chr5_1:23804698-23804717 | Msa0724730:intron | 50.0% | |
| AGGAGAACCAGAGTCTCATC+AGG | + | chr5_1:23805442-23805461 | None:intergenic | 50.0% | |
| TGGTTGGGGACCATAAGTGA+GGG | + | chr5_1:23805905-23805924 | None:intergenic | 50.0% | |
| ATGGTTGGGGACCATAAGTG+AGG | + | chr5_1:23805906-23805925 | None:intergenic | 50.0% | |
| TGGACACAACCACGATGGTT+GGG | + | chr5_1:23805920-23805939 | None:intergenic | 50.0% | |
| TTGGACACAACCACGATGGT+TGG | + | chr5_1:23805921-23805940 | None:intergenic | 50.0% | |
| TCTCCCAATCACGAGACTTG+AGG | - | chr5_1:23806081-23806100 | Msa0724730:intron | 50.0% | |
| CTCCCAATCACGAGACTTGA+GGG | - | chr5_1:23806082-23806101 | Msa0724730:intron | 50.0% | |
| GTCCCTCAAGTCTCGTGATT+GGG | + | chr5_1:23806087-23806106 | None:intergenic | 50.0% | |
| AGTCCCTCAAGTCTCGTGAT+TGG | + | chr5_1:23806088-23806107 | None:intergenic | 50.0% | |
| GCAGGCAGAACAATGGAACA+TGG | + | chr5_1:23806552-23806571 | None:intergenic | 50.0% | |
| ! | TAGTGTGGTTGGTGCAGTCA+AGG | - | chr5_1:23807002-23807021 | Msa0724730:exon | 50.0% |
| TTCACGCGCGACGAAGTTCT+TGG | - | chr5_1:23801884-23801903 | Msa0724730:intron | 55.0% | |
| AAGGTCCAGCGACATGTCGT+AGG | - | chr5_1:23801927-23801946 | Msa0724730:intron | 55.0% | |
| TCCAGCGACATGTCGTAGGT+CGG | - | chr5_1:23801931-23801950 | Msa0724730:intron | 55.0% | |
| GACATGTCGTAGGTCGGTGA+TGG | - | chr5_1:23801937-23801956 | Msa0724730:intron | 55.0% | |
| !!! | AGGGTTTTTGGTGGTGGTGG+TGG | - | chr5_1:23802124-23802143 | Msa0724730:intron | 55.0% |
| !! | TGGTGGTGGTGGTTCTGTTG+TGG | - | chr5_1:23802135-23802154 | Msa0724730:intron | 55.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr5_1:23803338-23803357 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr5_1:23803337-23803356 | Msa0724730:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr5_1:23803338-23803357 | Msa0724730:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr5_1:23803344-23803363 | Msa0724730:intron | 55.0% | |
| !! | AGGGGCAACTGGTGTTGCTT+CGG | + | chr5_1:23803466-23803485 | None:intergenic | 55.0% |
| CAACACCAGTTGCCCCTTTG+AGG | - | chr5_1:23803469-23803488 | Msa0724730:intron | 55.0% | |
| TAGTCCCTCAAAGGGGCAAC+TGG | + | chr5_1:23803477-23803496 | None:intergenic | 55.0% | |
| TCATCATCACTTGCCTCGCG+TGG | + | chr5_1:23803854-23803873 | None:intergenic | 55.0% | |
| ! | GCGAGGCAAGTGATGATGAG+AGG | - | chr5_1:23803855-23803874 | Msa0724730:intron | 55.0% |
| !! | GAGAAGTGCTGTGACTGCCA+TGG | - | chr5_1:23803877-23803896 | Msa0724730:intron | 55.0% |
| GAGATGCAGCAATCCTGACG+TGG | - | chr5_1:23803961-23803980 | Msa0724730:intron | 55.0% | |
| GAGCTAAGAAGACCCACGTC+AGG | + | chr5_1:23803977-23803996 | None:intergenic | 55.0% | |
| CGACGACTCTGCACTACAAC+TGG | - | chr5_1:23804407-23804426 | Msa0724730:intron | 55.0% | |
| TCACCTGTTCGGGATGCTAC+TGG | - | chr5_1:23804693-23804712 | Msa0724730:intron | 55.0% | |
| CTTATGGTCCCCAACCATCG+TGG | - | chr5_1:23805908-23805927 | Msa0724730:intron | 55.0% | |
| GGACACAACCACGATGGTTG+GGG | + | chr5_1:23805919-23805938 | None:intergenic | 55.0% | |
| GTGCAGTCAAGGTTGCAGTG+AGG | - | chr5_1:23807013-23807032 | Msa0724730:exon | 55.0% | |
| CTTCGAGTGATTCTCGCGCG+TGG | + | chr5_1:23801769-23801788 | None:intergenic | 60.0% | |
| ACCGACCTACGACATGTCGC+TGG | + | chr5_1:23801935-23801954 | None:intergenic | 60.0% | |
| GGAGAGTGAAGAGCCACGCG+AGG | - | chr5_1:23803838-23803857 | Msa0724730:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 23801306 | 23807434 | 23801306 | ID=Msa0724730;Name=Msa0724730 |
| chr5_1 | mRNA | 23801306 | 23807434 | 23801306 | ID=Msa0724730-mRNA-1;Parent=Msa0724730;Name=Msa0724730-mRNA-1;_AED=0.10;_eAED=0.10;_QI=419|0.8|0.66|1|1|1|6|363|433 |
| chr5_1 | exon | 23801306 | 23801824 | 23801306 | ID=Msa0724730-mRNA-1:exon:8795;Parent=Msa0724730-mRNA-1 |
| chr5_1 | exon | 23804021 | 23804230 | 23804021 | ID=Msa0724730-mRNA-1:exon:8794;Parent=Msa0724730-mRNA-1 |
| chr5_1 | exon | 23804312 | 23804391 | 23804312 | ID=Msa0724730-mRNA-1:exon:8793;Parent=Msa0724730-mRNA-1 |
| chr5_1 | exon | 23804531 | 23804638 | 23804531 | ID=Msa0724730-mRNA-1:exon:8792;Parent=Msa0724730-mRNA-1 |
| chr5_1 | exon | 23804724 | 23804906 | 23804724 | ID=Msa0724730-mRNA-1:exon:8791;Parent=Msa0724730-mRNA-1 |
| chr5_1 | exon | 23806451 | 23807434 | 23806451 | ID=Msa0724730-mRNA-1:exon:8790;Parent=Msa0724730-mRNA-1 |
| chr5_1 | five_prime_UTR | 23807016 | 23807434 | 23807016 | ID=Msa0724730-mRNA-1:five_prime_utr;Parent=Msa0724730-mRNA-1 |
| chr5_1 | CDS | 23806451 | 23807015 | 23806451 | ID=Msa0724730-mRNA-1:cds;Parent=Msa0724730-mRNA-1 |
| chr5_1 | CDS | 23804724 | 23804906 | 23804724 | ID=Msa0724730-mRNA-1:cds;Parent=Msa0724730-mRNA-1 |
| chr5_1 | CDS | 23804531 | 23804638 | 23804531 | ID=Msa0724730-mRNA-1:cds;Parent=Msa0724730-mRNA-1 |
| chr5_1 | CDS | 23804312 | 23804391 | 23804312 | ID=Msa0724730-mRNA-1:cds;Parent=Msa0724730-mRNA-1 |
| chr5_1 | CDS | 23804021 | 23804230 | 23804021 | ID=Msa0724730-mRNA-1:cds;Parent=Msa0724730-mRNA-1 |
| chr5_1 | CDS | 23801669 | 23801824 | 23801669 | ID=Msa0724730-mRNA-1:cds;Parent=Msa0724730-mRNA-1 |
| chr5_1 | three_prime_UTR | 23801306 | 23801668 | 23801306 | ID=Msa0724730-mRNA-1:three_prime_utr;Parent=Msa0724730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
