Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844760 | XP_003613587.1 | 86.866 | 434 | 17 | 6 | 1 | 434 | 1 | 394 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844760 | sp|O64511|TLOV1_ARATH | 48.293 | 410 | 163 | 8 | 7 | 413 | 19 | 382 | 2.11e-117 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844760 | G7K9S4 | 86.041 | 437 | 15 | 6 | 1 | 434 | 1 | 394 | 0.0 | 669 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0724730 | Msa0844760 | 0.924936 | 3.611456e-90 | -8.615850e-47 |
| Msa0844760 | Msa0844790 | 0.937167 | 5.376585e-98 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844760 | MtrunA17_Chr5g0415981 | 86.041 | 437 | 15 | 6 | 1 | 434 | 1 | 394 | 0.0 | 669 |
| Msa0844760 | MtrunA17_Chr2g0327561 | 39.161 | 143 | 57 | 2 | 266 | 408 | 445 | 557 | 2.70e-26 | 112 |
| Msa0844760 | MtrunA17_Chr2g0327561 | 43.564 | 101 | 56 | 1 | 29 | 129 | 442 | 541 | 1.91e-19 | 91.3 |
| Msa0844760 | MtrunA17_Chr2g0327561 | 38.211 | 123 | 46 | 1 | 271 | 393 | 167 | 259 | 5.38e-19 | 90.1 |
| Msa0844760 | MtrunA17_Chr2g0327561 | 34.862 | 109 | 70 | 1 | 29 | 137 | 159 | 266 | 2.01e-15 | 79.0 |
| Msa0844760 | MtrunA17_Chr8g0369091 | 37.956 | 137 | 55 | 1 | 266 | 402 | 416 | 522 | 1.38e-25 | 110 |
| Msa0844760 | MtrunA17_Chr8g0369091 | 40.171 | 117 | 62 | 2 | 29 | 138 | 413 | 528 | 7.25e-20 | 92.4 |
| Msa0844760 | MtrunA17_Chr8g0369091 | 35.772 | 123 | 49 | 1 | 271 | 393 | 137 | 229 | 1.07e-18 | 89.0 |
| Msa0844760 | MtrunA17_Chr8g0369091 | 35.897 | 117 | 72 | 2 | 13 | 129 | 115 | 228 | 5.41e-18 | 86.7 |
| Msa0844760 | MtrunA17_Chr4g0030361 | 39.062 | 128 | 48 | 1 | 266 | 393 | 126 | 223 | 4.67e-25 | 108 |
| Msa0844760 | MtrunA17_Chr4g0030361 | 43.564 | 101 | 56 | 1 | 29 | 129 | 123 | 222 | 1.72e-19 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844760 | AT2G02710.1 | 48.293 | 410 | 163 | 8 | 7 | 413 | 19 | 382 | 2.14e-118 | 351 |
| Msa0844760 | AT2G02710.2 | 48.049 | 410 | 162 | 8 | 7 | 413 | 19 | 380 | 1.92e-117 | 349 |
| Msa0844760 | AT2G02710.3 | 48.556 | 381 | 148 | 7 | 7 | 384 | 19 | 354 | 2.00e-108 | 324 |
| Msa0844760 | AT2G02710.4 | 50.000 | 308 | 134 | 6 | 7 | 311 | 19 | 309 | 4.90e-90 | 276 |
| Msa0844760 | AT2G02710.4 | 35.156 | 128 | 52 | 2 | 266 | 392 | 42 | 139 | 2.64e-15 | 77.0 |
| Msa0844760 | AT5G58140.4 | 28.700 | 446 | 218 | 14 | 29 | 425 | 135 | 529 | 4.18e-44 | 164 |
| Msa0844760 | AT5G58140.6 | 28.475 | 446 | 219 | 14 | 29 | 425 | 135 | 529 | 1.05e-43 | 164 |
| Msa0844760 | AT5G58140.7 | 28.475 | 446 | 219 | 14 | 29 | 425 | 135 | 529 | 1.05e-43 | 164 |
| Msa0844760 | AT5G58140.5 | 28.475 | 446 | 219 | 14 | 29 | 425 | 135 | 529 | 1.05e-43 | 164 |
| Msa0844760 | AT5G58140.2 | 28.475 | 446 | 219 | 14 | 29 | 425 | 135 | 529 | 1.05e-43 | 164 |
| Msa0844760 | AT5G58140.1 | 28.475 | 446 | 219 | 14 | 29 | 425 | 135 | 529 | 1.05e-43 | 164 |
| Msa0844760 | AT5G58140.3 | 28.475 | 446 | 219 | 14 | 29 | 425 | 135 | 529 | 1.30e-43 | 164 |
| Msa0844760 | AT3G45780.2 | 37.226 | 137 | 56 | 1 | 266 | 402 | 480 | 586 | 2.64e-24 | 106 |
| Msa0844760 | AT3G45780.2 | 41.463 | 123 | 42 | 1 | 271 | 393 | 207 | 299 | 8.25e-22 | 99.0 |
| Msa0844760 | AT3G45780.2 | 43.564 | 101 | 56 | 1 | 29 | 129 | 477 | 576 | 5.54e-19 | 90.5 |
| Msa0844760 | AT3G45780.2 | 29.452 | 146 | 91 | 3 | 29 | 167 | 199 | 339 | 1.06e-14 | 77.0 |
| Msa0844760 | AT3G45780.1 | 37.226 | 137 | 56 | 1 | 266 | 402 | 480 | 586 | 2.64e-24 | 106 |
| Msa0844760 | AT3G45780.1 | 41.463 | 123 | 42 | 1 | 271 | 393 | 207 | 299 | 8.25e-22 | 99.0 |
| Msa0844760 | AT3G45780.1 | 43.564 | 101 | 56 | 1 | 29 | 129 | 477 | 576 | 5.54e-19 | 90.5 |
| Msa0844760 | AT3G45780.1 | 29.452 | 146 | 91 | 3 | 29 | 167 | 199 | 339 | 1.06e-14 | 77.0 |
Find 126 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTGAATATGGGAAAAT+AGG | 0.110827 | 5_4:+23373534 | None:intergenic |
| TTCAAGTTCCGTTGAAATTA+AGG | 0.184229 | 5_4:-23372819 | Msa0844760:CDS |
| CTTCCCCACCTTTCTCCATT+TGG | 0.206460 | 5_4:-23373616 | Msa0844760:five_prime_UTR |
| CCGTTGAAATTAAGGGTTTA+TGG | 0.216772 | 5_4:-23372811 | Msa0844760:CDS |
| ATCAACAACATAATTATTAA+TGG | 0.233623 | 5_4:-23373217 | Msa0844760:exon |
| TTGGGGTGTGATGAGGAAAA+TGG | 0.237871 | 5_4:+23373447 | None:intergenic |
| GGAAGGATAAAAGCTCATTT+TGG | 0.238048 | 5_4:-23370264 | Msa0844760:CDS |
| CCTTTGGCACGTATAATATA+TGG | 0.242336 | 5_4:-23367818 | Msa0844760:three_prime_UTR |
| TTCCCCACCTTTCTCCATTT+GGG | 0.257845 | 5_4:-23373615 | Msa0844760:five_prime_UTR |
| GCGTGGCTAGCGAAGATTAT+TGG | 0.264187 | 5_4:+23373081 | None:intergenic |
| GATGAATATTGAATTGAATA+TGG | 0.267514 | 5_4:+23373525 | None:intergenic |
| TGTGCTTCTTCTGCTTCTAT+TGG | 0.287583 | 5_4:+23373246 | None:intergenic |
| CAGGAATCAAGTGTTGGATT+TGG | 0.287990 | 5_4:-23372680 | Msa0844760:CDS |
| AAAGCTTTGAATTTGTTTAC+TGG | 0.305343 | 5_4:-23370319 | Msa0844760:CDS |
| AGAAGTTTGTTCGGATAGTT+TGG | 0.314626 | 5_4:-23372728 | Msa0844760:CDS |
| ACACTAAGCTGTTTCATATC+AGG | 0.325862 | 5_4:+23367934 | None:intergenic |
| GAATTGAATATGGGAAAATA+GGG | 0.330078 | 5_4:+23373535 | None:intergenic |
| TTCGCGCGCGACGAAGTTCT+TGG | 0.330964 | 5_4:-23373039 | Msa0844760:CDS |
| CAAATCCAACACTTGATTCC+TGG | 0.331129 | 5_4:+23372681 | None:intergenic |
| TTCGTCGTGTTTCTTCTTCC+AGG | 0.345137 | 5_4:-23372699 | Msa0844760:CDS |
| TGGGGTGTGATGAGGAAAAT+GGG | 0.348275 | 5_4:+23373448 | None:intergenic |
| GAGAGAAGCGAACGTTGTTT+TGG | 0.349634 | 5_4:-23372938 | Msa0844760:CDS |
| TCAAGTTCCGTTGAAATTAA+GGG | 0.359299 | 5_4:-23372818 | Msa0844760:CDS |
| CAATTCACACAACATTTAAC+AGG | 0.361896 | 5_4:-23370285 | Msa0844760:CDS |
| AGGGTTTATGGTGGTGGTGG+TGG | 0.362667 | 5_4:-23372799 | Msa0844760:CDS |
| TTCTTCACATATCACCTGTT+CGG | 0.374962 | 5_4:-23370237 | Msa0844760:CDS |
| TTCCCGTCAACTGGCTATAG+TGG | 0.379544 | 5_4:+23370998 | None:intergenic |
| CGTGGCTAGCGAAGATTATT+GGG | 0.387551 | 5_4:+23373082 | None:intergenic |
| AAATTAAGGGTTTATGGTGG+TGG | 0.399077 | 5_4:-23372805 | Msa0844760:CDS |
| CGACGACTCTGCACTACAAC+TGG | 0.404927 | 5_4:-23370513 | Msa0844760:intron |
| TCTTCACATATCACCTGTTC+GGG | 0.406751 | 5_4:-23370236 | Msa0844760:CDS |
| ATAATAACAATAATAATATC+TGG | 0.414764 | 5_4:+23373480 | None:intergenic |
| TCACCTGTTCGGGATGCTAC+TGG | 0.419247 | 5_4:-23370226 | Msa0844760:CDS |
| ACACCAATCTTCCCGTCAAC+TGG | 0.421126 | 5_4:+23370989 | None:intergenic |
| TATACGAGAGACGAGGTATT+GGG | 0.426758 | 5_4:-23370569 | Msa0844760:CDS |
| TGGAAATTCGTGAAGCTGTA+AGG | 0.427129 | 5_4:-23372966 | Msa0844760:CDS |
| TGGTTCCATGTTTCAAGGTC+CGG | 0.435853 | 5_4:-23373010 | Msa0844760:CDS |
| TTATACGAGAGACGAGGTAT+TGG | 0.445398 | 5_4:-23370570 | Msa0844760:CDS |
| TCTTCCTTGATTATTTCTCT+TGG | 0.445792 | 5_4:-23370925 | Msa0844760:intron |
| AGGGATTGTGTGAACTAAGA+AGG | 0.446133 | 5_4:+23373554 | None:intergenic |
| CAATTTCATGAAGGCGTCAC+TGG | 0.449712 | 5_4:+23370737 | None:intergenic |
| GCATAAACAATAGGCATGTC+TGG | 0.456311 | 5_4:+23370759 | None:intergenic |
| GGGGTGTGATGAGGAAAATG+GGG | 0.466117 | 5_4:+23373449 | None:intergenic |
| TAGCCAGTTGACGGGAAGAT+TGG | 0.468953 | 5_4:-23370992 | Msa0844760:CDS |
| GCGTCACTGGCATAAACAAT+AGG | 0.471160 | 5_4:+23370750 | None:intergenic |
| ATTGGGTGGTTTGAAAGTGA+TGG | 0.474517 | 5_4:+23373099 | None:intergenic |
| TTGTCGGAAAGAAGTTTGTT+CGG | 0.475658 | 5_4:-23372737 | Msa0844760:CDS |
| GTTAAGGTAGCATACTTTGT+GGG | 0.479990 | 5_4:-23368009 | Msa0844760:intron |
| TGGTGGTGGTGGTTCTGTTG+TGG | 0.494177 | 5_4:-23372785 | Msa0844760:CDS |
| TGTTAAGGTAGCATACTTTG+TGG | 0.494641 | 5_4:-23368010 | Msa0844760:intron |
| TTCTTCCAGGAATCAAGTGT+TGG | 0.497846 | 5_4:-23372686 | Msa0844760:CDS |
| ATGAATATTGAATTGAATAT+GGG | 0.499372 | 5_4:+23373526 | None:intergenic |
| TTAAGGGTTTATGGTGGTGG+TGG | 0.503441 | 5_4:-23372802 | Msa0844760:CDS |
| TTCATCAAAGACATAGTCAT+AGG | 0.505578 | 5_4:-23367863 | Msa0844760:exon |
| TTTCCAGTAGCATCCCGAAC+AGG | 0.507450 | 5_4:+23370223 | None:intergenic |
| CTTTGATGAACCAGCAGACA+TGG | 0.513516 | 5_4:+23367876 | None:intergenic |
| AGGAGTTTATCCATGTCTGC+TGG | 0.514784 | 5_4:-23367886 | Msa0844760:CDS |
| GTCAAGTTGGCATGGTTGGA+AGG | 0.521901 | 5_4:+23373401 | None:intergenic |
| ATTTGTTTAGTTTAGACCAT+AGG | 0.525429 | 5_4:+23373366 | None:intergenic |
| TTGGGTGGTTTGAAAGTGAT+GGG | 0.526217 | 5_4:+23373100 | None:intergenic |
| AGTTATCGTTGAGATGATAG+AGG | 0.527796 | 5_4:-23367728 | Msa0844760:three_prime_UTR |
| GGGTGTGATGAGGAAAATGG+GGG | 0.528881 | 5_4:+23373450 | None:intergenic |
| CACGCGTTTCTCAACATCAC+TGG | 0.530728 | 5_4:-23373063 | Msa0844760:CDS |
| GAGCTAAGAAGACCCACGTC+AGG | 0.531685 | 5_4:+23370946 | None:intergenic |
| GACGCCTTCATGAAATTGAC+AGG | 0.532996 | 5_4:-23370732 | Msa0844760:intron |
| AGTACCTGTCAATTTCATGA+AGG | 0.534197 | 5_4:+23370728 | None:intergenic |
| TTGAAATAAGTGCTTAGTTG+TGG | 0.534246 | 5_4:+23373315 | None:intergenic |
| ACCCACTATAGCCAGTTGAC+GGG | 0.536576 | 5_4:-23371000 | Msa0844760:CDS |
| AGAAGTGGTTCCATGTTTCA+AGG | 0.536947 | 5_4:-23373015 | Msa0844760:CDS |
| AACCCACTATAGCCAGTTGA+CGG | 0.537779 | 5_4:-23371001 | Msa0844760:CDS |
| GGGATTGTGTGAACTAAGAA+GGG | 0.539891 | 5_4:+23373555 | None:intergenic |
| AAATGGAGAAAGGTGGGGAA+GGG | 0.544966 | 5_4:+23373618 | None:intergenic |
| CAAATGGAGAAAGGTGGGGA+AGG | 0.546588 | 5_4:+23373617 | None:intergenic |
| CCATAAACCCTTAATTTCAA+CGG | 0.549522 | 5_4:+23372811 | None:intergenic |
| AATAAGTGCTTAGTTGTGGA+TGG | 0.551966 | 5_4:+23373319 | None:intergenic |
| ATAATATCTGGTGAAAGTTG+TGG | 0.555040 | 5_4:+23373492 | None:intergenic |
| ACGAGGAATATAGACAGTGT+TGG | 0.556633 | 5_4:-23367960 | Msa0844760:CDS |
| TAGTGTGGTTGGTGCAGTCA+AGG | 0.556720 | 5_4:-23367917 | Msa0844760:CDS |
| ACTCCCAAATGGAGAAAGGT+GGG | 0.560309 | 5_4:+23373612 | None:intergenic |
| GTGGTTTGAAAGTGATGGGT+CGG | 0.560649 | 5_4:+23373104 | None:intergenic |
| CTAGACTCCCAAATGGAGAA+AGG | 0.567490 | 5_4:+23373608 | None:intergenic |
| GATGGGTCGGTGATTGTGAA+TGG | 0.567615 | 5_4:+23373117 | None:intergenic |
| ACAGTTAAGAAAACCCAAAA+CGG | 0.568098 | 5_4:+23372892 | None:intergenic |
| GTGTGATGAGGAAAATGGGG+GGG | 0.569413 | 5_4:+23373452 | None:intergenic |
| ATAGGCATGTCTGGCAAATG+TGG | 0.572472 | 5_4:+23370768 | None:intergenic |
| GGAAATTCGTGAAGCTGTAA+GGG | 0.574198 | 5_4:-23372965 | Msa0844760:CDS |
| TGTCGCCGGACCTTGAAACA+TGG | 0.576029 | 5_4:+23373005 | None:intergenic |
| TCTACCAAGAGAAATAATCA+AGG | 0.577573 | 5_4:+23370921 | None:intergenic |
| TCATCATCACTTGCCTCGCG+TGG | 0.577812 | 5_4:+23371069 | None:intergenic |
| CCATATATTATACGTGCCAA+AGG | 0.578527 | 5_4:+23367818 | None:intergenic |
| GACGAAGTTCTTGGTAGAAG+TGG | 0.578815 | 5_4:-23373030 | Msa0844760:CDS |
| TACAATTACAATTGACAATG+TGG | 0.579781 | 5_4:+23367675 | None:intergenic |
| ATGAAACAGCTTAGTGTGGT+TGG | 0.581811 | 5_4:-23367928 | Msa0844760:CDS |
| GACATGTCGTAGGTCGGTGA+TGG | 0.582559 | 5_4:-23372986 | Msa0844760:CDS |
| CACAGAAAAGATGTTGTCCA+TGG | 0.586739 | 5_4:+23371026 | None:intergenic |
| TCCCGTCAACTGGCTATAGT+GGG | 0.596340 | 5_4:+23370999 | None:intergenic |
| GAGATGCAGCAATCCTGACG+TGG | 0.597630 | 5_4:-23370959 | Msa0844760:CDS |
| TATGGGATTGGGGTGTGATG+AGG | 0.599416 | 5_4:+23373440 | None:intergenic |
| AAGGTCCGGCGACATGTCGT+AGG | 0.600291 | 5_4:-23372996 | Msa0844760:CDS |
| GACTCCCAAATGGAGAAAGG+TGG | 0.602330 | 5_4:+23373611 | None:intergenic |
| CATAGTCATAGGATTACTGA+TGG | 0.608261 | 5_4:-23367852 | Msa0844760:exon |
| CAGTTGTAGTGCAGAGTCGT+CGG | 0.610417 | 5_4:+23370514 | None:intergenic |
| ACCGACCTACGACATGTCGC+CGG | 0.611829 | 5_4:+23372991 | None:intergenic |
| AACTATAGAAAGATGAGATG+TGG | 0.614162 | 5_4:+23367564 | None:intergenic |
| TGTTCGGGATGCTACTGGAA+AGG | 0.614560 | 5_4:-23370221 | Msa0844760:intron |
| TGTGTGACTAGACTCCCAAA+TGG | 0.614912 | 5_4:+23373601 | None:intergenic |
| GAGAAGTGCTGTGACTGCCA+TGG | 0.616486 | 5_4:-23371043 | Msa0844760:CDS |
| GGCTAGCGAAGATTATTGGG+TGG | 0.616506 | 5_4:+23373085 | None:intergenic |
| TCACACAACATTTAACAGGA+AGG | 0.617824 | 5_4:-23370281 | Msa0844760:CDS |
| GATGATGTTGATGATGTCAC+TGG | 0.625045 | 5_4:-23372652 | Msa0844760:intron |
| AGTCATAGGATTACTGATGG+TGG | 0.626305 | 5_4:-23367849 | Msa0844760:three_prime_UTR |
| TCCGGCGACATGTCGTAGGT+CGG | 0.629598 | 5_4:-23372992 | Msa0844760:CDS |
| GTTATCGTTGAGATGATAGA+GGG | 0.632606 | 5_4:-23367727 | Msa0844760:three_prime_UTR |
| TTGAAATTAAGGGTTTATGG+TGG | 0.635580 | 5_4:-23372808 | Msa0844760:CDS |
| CTTCGAGTGATTCTCGCGCG+TGG | 0.639791 | 5_4:+23373157 | None:intergenic |
| GCGAGGCAAGTGATGATGAG+AGG | 0.642574 | 5_4:-23371065 | Msa0844760:CDS |
| CTCCCAAATGGAGAAAGGTG+GGG | 0.647997 | 5_4:+23373613 | None:intergenic |
| GGTGTGATGAGGAAAATGGG+GGG | 0.648363 | 5_4:+23373451 | None:intergenic |
| GGAGAGTGAAGAGCCACGCG+AGG | 0.676117 | 5_4:-23371082 | Msa0844760:CDS |
| AGATGCAGCAATCCTGACGT+GGG | 0.686224 | 5_4:-23370958 | Msa0844760:CDS |
| TAGTTTAGACCATAGGAACG+AGG | 0.691593 | 5_4:+23373373 | None:intergenic |
| CAGTGATGTTGAGAAACGCG+TGG | 0.707851 | 5_4:+23373064 | None:intergenic |
| AAATGTGGATTAGTTCTGCG+AGG | 0.718007 | 5_4:+23370783 | None:intergenic |
| TGATATGAAACAGCTTAGTG+TGG | 0.727007 | 5_4:-23367932 | Msa0844760:CDS |
| GTGCAGTCAAGGTTGCAGTG+AGG | 0.741307 | 5_4:-23367906 | Msa0844760:CDS |
| AATAGGTTATACGAGAGACG+AGG | 0.762817 | 5_4:-23370576 | Msa0844760:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAACAATAATAATATC+TGG | + | chr5_4:23367648-23367667 | None:intergenic | 10.0% |
| !! | TAAATATATATGAAAAAGAA+GGG | + | chr5_4:23371793-23371812 | None:intergenic | 10.0% |
| !! | ATAAATATATATGAAAAAGA+AGG | + | chr5_4:23371794-23371813 | None:intergenic | 10.0% |
| !! | ATGAATATTGAATTGAATAT+GGG | + | chr5_4:23367602-23367621 | None:intergenic | 15.0% |
| !! | ATCAACAACATAATTATTAA+TGG | - | chr5_4:23367908-23367927 | Msa0844760:CDS | 15.0% |
| !! | TTGGTTAATTATAGAAAAAA+CGG | - | chr5_4:23368206-23368225 | Msa0844760:intron | 15.0% |
| !!! | TTATATTTGATTTAGTGTTT+TGG | - | chr5_4:23369146-23369165 | Msa0844760:intron | 15.0% |
| !!! | AATGACAATTTATTTTTCTT+TGG | - | chr5_4:23369177-23369196 | Msa0844760:intron | 15.0% |
| !! | AGTTAATGATAATTGATAAA+AGG | - | chr5_4:23369435-23369454 | Msa0844760:intron | 15.0% |
| !! | AAAATATATAGATTGTTAAG+AGG | + | chr5_4:23369783-23369802 | None:intergenic | 15.0% |
| !! | CAAAAATATAAACAAATTCA+GGG | + | chr5_4:23370311-23370330 | None:intergenic | 15.0% |
| !! | ACAAAAATATAAACAAATTC+AGG | + | chr5_4:23370312-23370331 | None:intergenic | 15.0% |
| !!! | GTAATACACTTTTTTTTTTT+GGG | - | chr5_4:23370634-23370653 | Msa0844760:intron | 15.0% |
| !!! | TAATACACTTTTTTTTTTTG+GGG | - | chr5_4:23370635-23370654 | Msa0844760:intron | 15.0% |
| !!! | AAACATTTTCTCAAATTAAT+AGG | - | chr5_4:23371541-23371560 | Msa0844760:intron | 15.0% |
| !!! | AACATTTTCTCAAATTAATA+GGG | - | chr5_4:23371542-23371561 | Msa0844760:intron | 15.0% |
| !! | AAATATATATGAAAAAGAAG+GGG | + | chr5_4:23371792-23371811 | None:intergenic | 15.0% |
| !!! | TCACTTTTTTTTTTTTCAAA+TGG | + | chr5_4:23371824-23371843 | None:intergenic | 15.0% |
| !! | GATGAATATTGAATTGAATA+TGG | + | chr5_4:23367603-23367622 | None:intergenic | 20.0% |
| !!! | TGAATCATGATTTTATGTTT+CGG | - | chr5_4:23368363-23368382 | Msa0844760:intron | 20.0% |
| !!! | TTTATGCATTGATTAGTATT+CGG | - | chr5_4:23368551-23368570 | Msa0844760:intron | 20.0% |
| !!! | TAGCTTTTAATAAAATTACG+TGG | - | chr5_4:23368638-23368657 | Msa0844760:intron | 20.0% |
| !! | AGTAGAAAATAATAGACTAT+TGG | - | chr5_4:23369807-23369826 | Msa0844760:intron | 20.0% |
| !! | TTTAACTATGAATCAATAGA+TGG | - | chr5_4:23369879-23369898 | Msa0844760:intron | 20.0% |
| !!! | TTTCATTATGTTAGTTTCTA+TGG | - | chr5_4:23369920-23369939 | Msa0844760:intron | 20.0% |
| !! | TACATAATATCATACAGATT+TGG | - | chr5_4:23370022-23370041 | Msa0844760:intron | 20.0% |
| !!! | GGTAATACACTTTTTTTTTT+TGG | - | chr5_4:23370633-23370652 | Msa0844760:intron | 20.0% |
| !! | AAATAAATCATAGACATTTG+AGG | + | chr5_4:23370966-23370985 | None:intergenic | 20.0% |
| !! | TTGATATATTTCATTGTTTC+CGG | - | chr5_4:23371297-23371316 | Msa0844760:intron | 20.0% |
| !! | TTATACAAAACCATGAAAAT+AGG | - | chr5_4:23371471-23371490 | Msa0844760:intron | 20.0% |
| !!! | TCTAATATTTTCATTGTTTC+AGG | + | chr5_4:23371606-23371625 | None:intergenic | 20.0% |
| !! | AATATATATGAAAAAGAAGG+GGG | + | chr5_4:23371791-23371810 | None:intergenic | 20.0% |
| !!! | ATTTTTAAATTGCAGGATTT+TGG | - | chr5_4:23371984-23372003 | Msa0844760:intron | 20.0% |
| !!! | TTTTAGTTCCATAAGTTATA+TGG | - | chr5_4:23372070-23372089 | Msa0844760:intron | 20.0% |
| !! | AGAAAATAGAAATGATAGTT+TGG | + | chr5_4:23372332-23372351 | None:intergenic | 20.0% |
| !!! | AACTATCATTTCTATTTTCT+AGG | - | chr5_4:23372332-23372351 | Msa0844760:intron | 20.0% |
| !!! | GATAGTTATAATGAGATTTT+GGG | + | chr5_4:23372424-23372443 | None:intergenic | 20.0% |
| !!! | TGATAGTTATAATGAGATTT+TGG | + | chr5_4:23372425-23372444 | None:intergenic | 20.0% |
| !! | TCATTATAACTATCATTTCT+AGG | - | chr5_4:23372430-23372449 | Msa0844760:intron | 20.0% |
| !!! | ATACACCTTTTAAAATTACA+CGG | + | chr5_4:23372584-23372603 | None:intergenic | 20.0% |
| !! | ATCATCCAAAATAACTAATA+AGG | + | chr5_4:23372733-23372752 | None:intergenic | 20.0% |
| !!! | TCCATATTTTATGGAAATTT+CGG | - | chr5_4:23373048-23373067 | Msa0844760:CDS | 20.0% |
| ! | GAATTGAATATGGGAAAATA+GGG | + | chr5_4:23367593-23367612 | None:intergenic | 25.0% |
| ! | TGAATTGAATATGGGAAAAT+AGG | + | chr5_4:23367594-23367613 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTCTTTTGAGTAT+GGG | + | chr5_4:23367705-23367724 | None:intergenic | 25.0% |
| !! | ATTTGTTTAGTTTAGACCAT+AGG | + | chr5_4:23367762-23367781 | None:intergenic | 25.0% |
| ! | TTTGTATTAGCACAAAATCA+CGG | + | chr5_4:23368887-23368906 | None:intergenic | 25.0% |
| !!! | TCGAAGTTTTAACTAAATCA+CGG | - | chr5_4:23368982-23369001 | Msa0844760:intron | 25.0% |
| !! | TTAAAGCACTAATTCATGTT+TGG | + | chr5_4:23369048-23369067 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr5_4:23369502-23369521 | None:intergenic | 25.0% |
| !! | ACTAAATTTGAATACTGACT+TGG | - | chr5_4:23369698-23369717 | Msa0844760:intron | 25.0% |
| !!! | ACAATGTGATTTGATTTGAT+TGG | - | chr5_4:23369733-23369752 | Msa0844760:intron | 25.0% |
| ! | ACAGATAATCAATTAATCCA+TGG | + | chr5_4:23369760-23369779 | None:intergenic | 25.0% |
| ! | GAAAATAATAGACTATTGGT+TGG | - | chr5_4:23369811-23369830 | Msa0844760:intron | 25.0% |
| ! | AAAATCTTTACACGTCTTAT+TGG | + | chr5_4:23369861-23369880 | None:intergenic | 25.0% |
| ! | TCTTGGTAAATATGAGTTAT+TGG | + | chr5_4:23370494-23370513 | None:intergenic | 25.0% |
| !! | AAAACACAATCTGAAATTCT+TGG | + | chr5_4:23370511-23370530 | None:intergenic | 25.0% |
| ! | CTTATTGCTTATACAGATAA+GGG | - | chr5_4:23370700-23370719 | Msa0844760:intron | 25.0% |
| !!! | AAAGCTTTGAATTTGTTTAC+TGG | - | chr5_4:23370806-23370825 | Msa0844760:CDS | 25.0% |
| !!! | TCTATGATTTATTTTCTGTC+AGG | - | chr5_4:23370972-23370991 | Msa0844760:CDS | 25.0% |
| !!! | AAATAGTTTTTTGTTGGTCT+GGG | - | chr5_4:23371068-23371087 | Msa0844760:CDS | 25.0% |
| !! | CTAACGCAAATTTTATGAAA+TGG | + | chr5_4:23371164-23371183 | None:intergenic | 25.0% |
| !!! | GTTAGTTTTACTTGTTAACA+AGG | - | chr5_4:23371179-23371198 | Msa0844760:intron | 25.0% |
| !! | CATTTTCTTTCCTATTTTCA+TGG | + | chr5_4:23371484-23371503 | None:intergenic | 25.0% |
| ! | CATGAAAATAGGAAAGAAAA+TGG | - | chr5_4:23371482-23371501 | Msa0844760:intron | 25.0% |
| ! | TTCAGGAACTATAAAGATAA+TGG | + | chr5_4:23371589-23371608 | None:intergenic | 25.0% |
| !!! | TAAGAGTGTTTTATGCTTTT+TGG | - | chr5_4:23371677-23371696 | Msa0844760:intron | 25.0% |
| !!! | TATGCTTTTTGGTTTAGTTT+TGG | - | chr5_4:23371688-23371707 | Msa0844760:intron | 25.0% |
| ! | ATATATATGAAAAAGAAGGG+GGG | + | chr5_4:23371790-23371809 | None:intergenic | 25.0% |
| ! | ATCCTGCAATTTAAAAATGA+GGG | + | chr5_4:23371982-23372001 | None:intergenic | 25.0% |
| ! | AATCCTGCAATTTAAAAATG+AGG | + | chr5_4:23371983-23372002 | None:intergenic | 25.0% |
| ! | ATAACTTATGGAACTAAAAG+TGG | + | chr5_4:23372069-23372088 | None:intergenic | 25.0% |
| ! | TTACATGATCACAATACATA+TGG | - | chr5_4:23372168-23372187 | Msa0844760:intron | 25.0% |
| ! | TACATGATCACAATACATAT+GGG | - | chr5_4:23372169-23372188 | Msa0844760:intron | 25.0% |
| ! | TGTACAAGGGAAAAATATTA+AGG | - | chr5_4:23372228-23372247 | Msa0844760:intron | 25.0% |
| !!! | TCATATTTGCTTGTTTTTAC+TGG | - | chr5_4:23372384-23372403 | Msa0844760:intron | 25.0% |
| ! | TGTCAATCTTGAATACAATT+GGG | + | chr5_4:23372534-23372553 | None:intergenic | 25.0% |
| !! | TCCATCCTTATTAGTTATTT+TGG | - | chr5_4:23372725-23372744 | Msa0844760:CDS | 25.0% |
| ! | TCCAAAATAACTAATAAGGA+TGG | + | chr5_4:23372729-23372748 | None:intergenic | 25.0% |
| ! | TTAGGATAACAAAATATCGA+AGG | + | chr5_4:23372798-23372817 | None:intergenic | 25.0% |
| ! | GAAATTTCCATAAAATATGG+AGG | + | chr5_4:23373049-23373068 | None:intergenic | 25.0% |
| ! | ACCGAAATTTCCATAAAATA+TGG | + | chr5_4:23373052-23373071 | None:intergenic | 25.0% |
| !!! | TCTATATTCCTCGTTTTTAT+AGG | + | chr5_4:23373159-23373178 | None:intergenic | 25.0% |
| ! | TACAATTACAATTGACAATG+TGG | + | chr5_4:23373453-23373472 | None:intergenic | 25.0% |
| ! | AAAAACTAAACATTCTCTGT+TGG | - | chr5_4:23373480-23373499 | Msa0844760:five_prime_UTR | 25.0% |
| !!! | AACCTTAACTTTGTTTTTAC+AGG | - | chr5_4:23373597-23373616 | Msa0844760:five_prime_UTR | 25.0% |
| ! | ATCCTGTAAAAACAAAGTTA+AGG | + | chr5_4:23373602-23373621 | None:intergenic | 25.0% |
| ATAATATCTGGTGAAAGTTG+TGG | + | chr5_4:23367636-23367655 | None:intergenic | 30.0% | |
| !! | TTTCTTTTGAGTATGGGATT+GGG | + | chr5_4:23367699-23367718 | None:intergenic | 30.0% |
| !! | TTTTCTTTTGAGTATGGGAT+TGG | + | chr5_4:23367700-23367719 | None:intergenic | 30.0% |
| !!! | GGTGTTTTTTCTTTTGAGTA+TGG | + | chr5_4:23367706-23367725 | None:intergenic | 30.0% |
| TTGAAATAAGTGCTTAGTTG+TGG | + | chr5_4:23367813-23367832 | None:intergenic | 30.0% | |
| ACAGTTAAGAAAACCCAAAA+CGG | + | chr5_4:23368236-23368255 | None:intergenic | 30.0% | |
| !! | CCACTTTTAACACAAAAAAC+CGG | + | chr5_4:23368263-23368282 | None:intergenic | 30.0% |
| ! | TTCAAGTTCCGTTGAAATTA+AGG | - | chr5_4:23368306-23368325 | Msa0844760:intron | 30.0% |
| TCAAGTTCCGTTGAAATTAA+GGG | - | chr5_4:23368307-23368326 | Msa0844760:intron | 30.0% | |
| CCATAAACCCTTAATTTCAA+CGG | + | chr5_4:23368317-23368336 | None:intergenic | 30.0% | |
| TTGAAATTAAGGGTTTATGG+TGG | - | chr5_4:23368317-23368336 | Msa0844760:intron | 30.0% | |
| !!! | ATTTTATGTTTCGGTGTTGT+CGG | - | chr5_4:23368372-23368391 | Msa0844760:intron | 30.0% |
| CAATGCACTAAGTAAATGTT+TGG | + | chr5_4:23368696-23368715 | None:intergenic | 30.0% | |
| ACTAATTCATGTTTGGACTT+TGG | + | chr5_4:23369041-23369060 | None:intergenic | 30.0% | |
| TATTACGCTTTCTGTCTATA+AGG | - | chr5_4:23369268-23369287 | Msa0844760:intron | 30.0% | |
| AAGGATGTGAAGACAAAATA+TGG | - | chr5_4:23369454-23369473 | Msa0844760:intron | 30.0% | |
| GAAGACAAAATATGGTTTAG+AGG | - | chr5_4:23369462-23369481 | Msa0844760:intron | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr5_4:23369506-23369525 | Msa0844760:intron | 30.0% |
| TGTAAAGAAGTTCACACATT+TGG | - | chr5_4:23369620-23369639 | Msa0844760:intron | 30.0% | |
| GTAAAGAAGTTCACACATTT+GGG | - | chr5_4:23369621-23369640 | Msa0844760:intron | 30.0% | |
| TTCAAATTTAGTCCCTCAAA+GGG | + | chr5_4:23369690-23369709 | None:intergenic | 30.0% | |
| ATTCAAATTTAGTCCCTCAA+AGG | + | chr5_4:23369691-23369710 | None:intergenic | 30.0% | |
| ! | TCTTCCTTGATTATTTCTCT+TGG | - | chr5_4:23370200-23370219 | Msa0844760:intron | 30.0% |
| TCTACCAAGAGAAATAATCA+AGG | + | chr5_4:23370207-23370226 | None:intergenic | 30.0% | |
| !! | ATTTGATGGTGTTTGACATA+AGG | - | chr5_4:23370460-23370479 | Msa0844760:intron | 30.0% |
| AATTACCATGTTGTCTGAAT+AGG | - | chr5_4:23370532-23370551 | Msa0844760:CDS | 30.0% | |
| TATAACCTATTCAGACAACA+TGG | + | chr5_4:23370540-23370559 | None:intergenic | 30.0% | |
| GGAACTTAGATCAATGTAAA+TGG | - | chr5_4:23370656-23370675 | Msa0844760:intron | 30.0% | |
| !! | ATCAATGTAAATGGACTATG+TGG | - | chr5_4:23370665-23370684 | Msa0844760:intron | 30.0% |
| CCTTATCTGTATAAGCAATA+AGG | + | chr5_4:23370702-23370721 | None:intergenic | 30.0% | |
| CCTTATTGCTTATACAGATA+AGG | - | chr5_4:23370699-23370718 | Msa0844760:intron | 30.0% | |
| !! | CAGTACGTATTTTGAATTAC+AGG | - | chr5_4:23370750-23370769 | Msa0844760:CDS | 30.0% |
| !! | TCCATTCATTTTTATCTCTG+CGG | - | chr5_4:23370781-23370800 | Msa0844760:CDS | 30.0% |
| CAATTCACACAACATTTAAC+AGG | - | chr5_4:23370840-23370859 | Msa0844760:intron | 30.0% | |
| TAGTTCAACTAAGAAATAGC+TGG | + | chr5_4:23370939-23370958 | None:intergenic | 30.0% | |
| !! | ATTTATTTTCTGTCAGGCAT+CGG | - | chr5_4:23370978-23370997 | Msa0844760:CDS | 30.0% |
| !! | AGTTGAAGTATCTGCTTTTA+TGG | - | chr5_4:23371012-23371031 | Msa0844760:CDS | 30.0% |
| CAAAAAACTATTTGTGCTCA+AGG | + | chr5_4:23371061-23371080 | None:intergenic | 30.0% | |
| !!! | GAGCACAAATAGTTTTTTGT+TGG | - | chr5_4:23371062-23371081 | Msa0844760:CDS | 30.0% |
| !!! | CAAATAGTTTTTTGTTGGTC+TGG | - | chr5_4:23371067-23371086 | Msa0844760:CDS | 30.0% |
| !! | TTGGCTTTGTAGTTTCTTAA+AGG | - | chr5_4:23371707-23371726 | Msa0844760:intron | 30.0% |
| !!! | GTTTCTTAAAGGCTTTTTTC+TGG | - | chr5_4:23371718-23371737 | Msa0844760:intron | 30.0% |
| !! | TCTGCTTTTCATTTGTATTG+TGG | - | chr5_4:23371755-23371774 | Msa0844760:intron | 30.0% |
| AAACAGAAAGAGTTAGTAGT+TGG | - | chr5_4:23371893-23371912 | Msa0844760:intron | 30.0% | |
| AACAGAAAGAGTTAGTAGTT+GGG | - | chr5_4:23371894-23371913 | Msa0844760:intron | 30.0% | |
| ATAGCACAATCATGATACTT+GGG | + | chr5_4:23371953-23371972 | None:intergenic | 30.0% | |
| AATAGCACAATCATGATACT+TGG | + | chr5_4:23371954-23371973 | None:intergenic | 30.0% | |
| !!! | GTATCATGATTGTGCTATTT+TGG | - | chr5_4:23371955-23371974 | Msa0844760:intron | 30.0% |
| TAGCATGACCATATAACTTA+TGG | + | chr5_4:23372081-23372100 | None:intergenic | 30.0% | |
| ! | GTTATATGGTCATGCTATTT+CGG | - | chr5_4:23372084-23372103 | Msa0844760:intron | 30.0% |
| ATACATATGGGACTAAAAGT+TGG | - | chr5_4:23372181-23372200 | Msa0844760:intron | 30.0% | |
| AAAAGTTGGAGAAAATCAAC+AGG | - | chr5_4:23372195-23372214 | Msa0844760:intron | 30.0% | |
| !!! | AGGACTTCTTTTTTGTACAA+GGG | - | chr5_4:23372215-23372234 | Msa0844760:intron | 30.0% |
| AAAATCAAGCAATTGAGAAG+TGG | - | chr5_4:23372254-23372273 | Msa0844760:intron | 30.0% | |
| ! | TCATTTCTATTTTCTAGGCT+TGG | - | chr5_4:23372337-23372356 | Msa0844760:intron | 30.0% |
| ! | ATAACTATCATTTCTAGGCT+TGG | - | chr5_4:23372435-23372454 | Msa0844760:intron | 30.0% |
| GTCAATCTTGAATACAATTG+GGG | + | chr5_4:23372533-23372552 | None:intergenic | 30.0% | |
| CTGTCAATCTTGAATACAAT+TGG | + | chr5_4:23372535-23372554 | None:intergenic | 30.0% | |
| ! | GATCACCGTGTAATTTTAAA+AGG | - | chr5_4:23372576-23372595 | Msa0844760:intron | 30.0% |
| !! | AGAATAGAGTTGATGTAATC+TGG | - | chr5_4:23372640-23372659 | Msa0844760:intron | 30.0% |
| GAATTAAAACTACAAAGCCA+GGG | + | chr5_4:23372850-23372869 | None:intergenic | 30.0% | |
| AGAATTAAAACTACAAAGCC+AGG | + | chr5_4:23372851-23372870 | None:intergenic | 30.0% | |
| CTCAACTGTTACAAGTTAAT+CGG | - | chr5_4:23372869-23372888 | Msa0844760:CDS | 30.0% | |
| GCATGAAACATAACCATATA+TGG | + | chr5_4:23372907-23372926 | None:intergenic | 30.0% | |
| !! | GTGCTGTTTAAATTTGTTCA+CGG | - | chr5_4:23372945-23372964 | Msa0844760:CDS | 30.0% |
| ! | GGATCCATTTTATGCATTTT+GGG | - | chr5_4:23372966-23372985 | Msa0844760:CDS | 30.0% |
| !! | AAGCTTTAAGTGCCATATAT+GGG | - | chr5_4:23372994-23373013 | Msa0844760:CDS | 30.0% |
| ! | TCGCTAAATTCTGTTTGTTA+AGG | - | chr5_4:23373100-23373119 | Msa0844760:CDS | 30.0% |
| TTCATCAAAGACATAGTCAT+AGG | - | chr5_4:23373262-23373281 | Msa0844760:five_prime_UTR | 30.0% | |
| !! | AGATTGATGATTTTTCTCGA+TGG | + | chr5_4:23373372-23373391 | None:intergenic | 30.0% |
| AACTATAGAAAGATGAGATG+TGG | + | chr5_4:23373564-23373583 | None:intergenic | 30.0% | |
| !! | TTCTTTTGAGTATGGGATTG+GGG | + | chr5_4:23367698-23367717 | None:intergenic | 35.0% |
| AATAAGTGCTTAGTTGTGGA+TGG | + | chr5_4:23367809-23367828 | None:intergenic | 35.0% | |
| TAGAGTCCAAAAAGTTCACA+TGG | - | chr5_4:23367844-23367863 | Msa0844760:three_prime_UTR | 35.0% | |
| AGAGTCCAAAAAGTTCACAT+GGG | - | chr5_4:23367845-23367864 | Msa0844760:three_prime_UTR | 35.0% | |
| ! | GGTTTTCTTAACTGTTTGTC+CGG | - | chr5_4:23368241-23368260 | Msa0844760:intron | 35.0% |
| !!! | CCGGTTTTTTGTGTTAAAAG+TGG | - | chr5_4:23368260-23368279 | Msa0844760:intron | 35.0% |
| CCGTTGAAATTAAGGGTTTA+TGG | - | chr5_4:23368314-23368333 | Msa0844760:intron | 35.0% | |
| AAATTAAGGGTTTATGGTGG+TGG | - | chr5_4:23368320-23368339 | Msa0844760:intron | 35.0% | |
| ! | TTGTCGGAAAGAAGTTTGTT+CGG | - | chr5_4:23368388-23368407 | Msa0844760:intron | 35.0% |
| ! | AGAAGTTTGTTCGGATAGTT+TGG | - | chr5_4:23368397-23368416 | Msa0844760:intron | 35.0% |
| GATTAGTATTCGGACATGTT+TGG | - | chr5_4:23368561-23368580 | Msa0844760:intron | 35.0% | |
| ! | GCTGTGGAATTTTGCAATTT+CGG | - | chr5_4:23368728-23368747 | Msa0844760:intron | 35.0% |
| TGCTAATACAAACATGCACT+TGG | - | chr5_4:23368895-23368914 | Msa0844760:intron | 35.0% | |
| TTCATGTTTGGACTTTGGAT+TGG | + | chr5_4:23369036-23369055 | None:intergenic | 35.0% | |
| CTTGGAAAGCTACACTTATT+AGG | - | chr5_4:23369103-23369122 | Msa0844760:intron | 35.0% | |
| GCTGATCTATTCAGAAAGTA+AGG | + | chr5_4:23369216-23369235 | None:intergenic | 35.0% | |
| ATCCATGTAAGCAACTTATG+TGG | - | chr5_4:23369343-23369362 | Msa0844760:intron | 35.0% | |
| CAACTTATGTGGCATTAATG+AGG | - | chr5_4:23369354-23369373 | Msa0844760:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr5_4:23369486-23369505 | Msa0844760:intron | 35.0% |
| TCAAATTTAGTCCCTCAAAG+GGG | + | chr5_4:23369689-23369708 | None:intergenic | 35.0% | |
| !! | GATTTGATTTGATTGGTCCA+TGG | - | chr5_4:23369740-23369759 | Msa0844760:intron | 35.0% |
| ! | TTAGTTTCTATGGTCCCTTT+TGG | - | chr5_4:23369930-23369949 | Msa0844760:intron | 35.0% |
| ATGGACAAATGCACAATCAT+TGG | + | chr5_4:23369964-23369983 | None:intergenic | 35.0% | |
| CCAAATAGAACCAAATCACA+TGG | + | chr5_4:23369983-23370002 | None:intergenic | 35.0% | |
| !! | CCATGTGATTTGGTTCTATT+TGG | - | chr5_4:23369980-23369999 | Msa0844760:intron | 35.0% |
| AGTACCTGTCAATTTCATGA+AGG | + | chr5_4:23370400-23370419 | None:intergenic | 35.0% | |
| TAGTAGCCATGCAAATTTGA+TGG | - | chr5_4:23370446-23370465 | Msa0844760:intron | 35.0% | |
| CAAACACCATCAAATTTGCA+TGG | + | chr5_4:23370455-23370474 | None:intergenic | 35.0% | |
| CACCTAAAAATCTACAGTTG+CGG | + | chr5_4:23370582-23370601 | None:intergenic | 35.0% | |
| ACCGCAGAGATAAAAATGAA+TGG | + | chr5_4:23370785-23370804 | None:intergenic | 35.0% | |
| TCACACAACATTTAACAGGA+AGG | - | chr5_4:23370844-23370863 | Msa0844760:intron | 35.0% | |
| ! | GGAAGGATAAAAGCTCATTT+TGG | - | chr5_4:23370861-23370880 | Msa0844760:intron | 35.0% |
| TTCTTCACATATCACCTGTT+CGG | - | chr5_4:23370888-23370907 | Msa0844760:intron | 35.0% | |
| TGATTTACCGATACAAGAGT+TGG | - | chr5_4:23371095-23371114 | Msa0844760:intron | 35.0% | |
| GATTTACCGATACAAGAGTT+GGG | - | chr5_4:23371096-23371115 | Msa0844760:intron | 35.0% | |
| ! | TTTAAAGCGAGTCATTGTGA+TGG | - | chr5_4:23371214-23371233 | Msa0844760:intron | 35.0% |
| AAAAGCTAAAATCCTAGCCA+GGG | - | chr5_4:23371239-23371258 | Msa0844760:intron | 35.0% | |
| TTTCCGGAAATGTAAGACAA+TGG | - | chr5_4:23371313-23371332 | Msa0844760:intron | 35.0% | |
| GAACCATTGTCTTACATTTC+CGG | + | chr5_4:23371319-23371338 | None:intergenic | 35.0% | |
| TTTATATCCTGATGAGACTC+TGG | - | chr5_4:23371638-23371657 | Msa0844760:intron | 35.0% | |
| AAACACTCTTAGTGAGAACA+AGG | + | chr5_4:23371668-23371687 | None:intergenic | 35.0% | |
| ACAAATGAAAAGCAGAGTAC+AGG | + | chr5_4:23371751-23371770 | None:intergenic | 35.0% | |
| ACAGAAAGAGTTAGTAGTTG+GGG | - | chr5_4:23371895-23371914 | Msa0844760:intron | 35.0% | |
| AAAGCAAGGTAAAGCCTAAT+AGG | + | chr5_4:23371923-23371942 | None:intergenic | 35.0% | |
| TAGCACAATCATGATACTTG+GGG | + | chr5_4:23371952-23371971 | None:intergenic | 35.0% | |
| !! | GTCCCTCATTTTTAAATTGC+AGG | - | chr5_4:23371977-23371996 | Msa0844760:intron | 35.0% |
| GGAATTTGAGGGAAAATCAA+GGG | + | chr5_4:23372044-23372063 | None:intergenic | 35.0% | |
| TAAAAGTGGAGGGAATTTGA+GGG | + | chr5_4:23372055-23372074 | None:intergenic | 35.0% | |
| CTTATGGAACTAAAAGTGGA+GGG | + | chr5_4:23372065-23372084 | None:intergenic | 35.0% | |
| ACTTATGGAACTAAAAGTGG+AGG | + | chr5_4:23372066-23372085 | None:intergenic | 35.0% | |
| !!! | CAGGACTTCTTTTTTGTACA+AGG | - | chr5_4:23372214-23372233 | Msa0844760:intron | 35.0% |
| GAAGGCTTAAGTGTAAGTTT+AGG | + | chr5_4:23372780-23372799 | None:intergenic | 35.0% | |
| ! | GCTGAATTAGCTTCCATATA+TGG | - | chr5_4:23372891-23372910 | Msa0844760:CDS | 35.0% |
| ! | GTTTCATGCTTTTGTCTGTA+TGG | - | chr5_4:23372918-23372937 | Msa0844760:CDS | 35.0% |
| ! | CGGATCCATTTTATGCATTT+TGG | - | chr5_4:23372965-23372984 | Msa0844760:CDS | 35.0% |
| GCTTCCCAAAATGCATAAAA+TGG | + | chr5_4:23372973-23372992 | None:intergenic | 35.0% | |
| !! | GAAGCTTTAAGTGCCATATA+TGG | - | chr5_4:23372993-23373012 | Msa0844760:CDS | 35.0% |
| ! | TGACAGTCCTCCATATTTTA+TGG | - | chr5_4:23373039-23373058 | Msa0844760:CDS | 35.0% |
| TGTTAAGGTAGCATACTTTG+TGG | - | chr5_4:23373115-23373134 | Msa0844760:CDS | 35.0% | |
| GTTAAGGTAGCATACTTTGT+GGG | - | chr5_4:23373116-23373135 | Msa0844760:CDS | 35.0% | |
| ! | ACACTAAGCTGTTTCATATC+AGG | + | chr5_4:23373194-23373213 | None:intergenic | 35.0% |
| TGATATGAAACAGCTTAGTG+TGG | - | chr5_4:23373193-23373212 | Msa0844760:CDS | 35.0% | |
| CATAGTCATAGGATTACTGA+TGG | - | chr5_4:23373273-23373292 | Msa0844760:five_prime_UTR | 35.0% | |
| CCATATATTATACGTGCCAA+AGG | + | chr5_4:23373310-23373329 | None:intergenic | 35.0% | |
| CCTTTGGCACGTATAATATA+TGG | - | chr5_4:23373307-23373326 | Msa0844760:five_prime_UTR | 35.0% | |
| AGTTATCGTTGAGATGATAG+AGG | - | chr5_4:23373397-23373416 | Msa0844760:five_prime_UTR | 35.0% | |
| GTTATCGTTGAGATGATAGA+GGG | - | chr5_4:23373398-23373417 | Msa0844760:five_prime_UTR | 35.0% | |
| GGGATTGTGTGAACTAAGAA+GGG | + | chr5_4:23367573-23367592 | None:intergenic | 40.0% | |
| AGGGATTGTGTGAACTAAGA+AGG | + | chr5_4:23367574-23367593 | None:intergenic | 40.0% | |
| !!! | TTTTGTCAAGTTGGCATGGT+TGG | + | chr5_4:23367731-23367750 | None:intergenic | 40.0% |
| !!! | AGGTTTTTGTCAAGTTGGCA+TGG | + | chr5_4:23367735-23367754 | None:intergenic | 40.0% |
| ! | GAACGAGGTTTTTGTCAAGT+TGG | + | chr5_4:23367740-23367759 | None:intergenic | 40.0% |
| TGACAAAAACCTCGTTCCTA+TGG | - | chr5_4:23367743-23367762 | Msa0844760:three_prime_UTR | 40.0% | |
| TAGTTTAGACCATAGGAACG+AGG | + | chr5_4:23367755-23367774 | None:intergenic | 40.0% | |
| ! | GCAATCCCATGTGAACTTTT+TGG | + | chr5_4:23367853-23367872 | None:intergenic | 40.0% |
| TGTGCTTCTTCTGCTTCTAT+TGG | + | chr5_4:23367882-23367901 | None:intergenic | 40.0% | |
| TTGGGTGGTTTGAAAGTGAT+GGG | + | chr5_4:23368028-23368047 | None:intergenic | 40.0% | |
| ATTGGGTGGTTTGAAAGTGA+TGG | + | chr5_4:23368029-23368048 | None:intergenic | 40.0% | |
| AGAAGTGGTTCCATGTTTCA+AGG | - | chr5_4:23368110-23368129 | Msa0844760:intron | 40.0% | |
| TGGAAATTCGTGAAGCTGTA+AGG | - | chr5_4:23368159-23368178 | Msa0844760:intron | 40.0% | |
| GGAAATTCGTGAAGCTGTAA+GGG | - | chr5_4:23368160-23368179 | Msa0844760:intron | 40.0% | |
| TTCTTCCAGGAATCAAGTGT+TGG | - | chr5_4:23368439-23368458 | Msa0844760:intron | 40.0% | |
| CAAATCCAACACTTGATTCC+TGG | + | chr5_4:23368447-23368466 | None:intergenic | 40.0% | |
| !! | CAGGAATCAAGTGTTGGATT+TGG | - | chr5_4:23368445-23368464 | Msa0844760:intron | 40.0% |
| !! | GATGATGTTGATGATGTCAC+TGG | - | chr5_4:23368473-23368492 | Msa0844760:intron | 40.0% |
| !! | ATGTTGATGATGTCACTGGT+TGG | - | chr5_4:23368477-23368496 | Msa0844760:intron | 40.0% |
| !! | ATTGATGACGAGTAATGCTG+TGG | - | chr5_4:23368712-23368731 | Msa0844760:intron | 40.0% |
| TGTCGTTGTTATGTGCACTA+TGG | - | chr5_4:23368813-23368832 | Msa0844760:intron | 40.0% | |
| AAATCGCAATGAATTCACCG+TGG | + | chr5_4:23368946-23368965 | None:intergenic | 40.0% | |
| ! | CGGTGAATTCATTGCGATTT+TGG | - | chr5_4:23368946-23368965 | Msa0844760:intron | 40.0% |
| GTAGCTTTCCAAGTGTAGTT+GGG | + | chr5_4:23369096-23369115 | None:intergenic | 40.0% | |
| TGTAGCTTTCCAAGTGTAGT+TGG | + | chr5_4:23369097-23369116 | None:intergenic | 40.0% | |
| TGCCACATAAGTTGCTTACA+TGG | + | chr5_4:23369348-23369367 | None:intergenic | 40.0% | |
| TGTGCAGCAGAATAGCATAA+AGG | + | chr5_4:23369399-23369418 | None:intergenic | 40.0% | |
| TGGTTTAGAGGTCAATGAGT+TGG | - | chr5_4:23369474-23369493 | Msa0844760:intron | 40.0% | |
| CATTGGACAAGAGACCAAAA+GGG | + | chr5_4:23369947-23369966 | None:intergenic | 40.0% | |
| TCATTGGACAAGAGACCAAA+AGG | + | chr5_4:23369948-23369967 | None:intergenic | 40.0% | |
| GTGCATTTGTCCATGTGATT+TGG | - | chr5_4:23369970-23369989 | Msa0844760:intron | 40.0% | |
| CACAGAAAAGATGTTGTCCA+TGG | + | chr5_4:23370102-23370121 | None:intergenic | 40.0% | |
| !! | AAATGTGGATTAGTTCTGCG+AGG | + | chr5_4:23370345-23370364 | None:intergenic | 40.0% |
| GCATAAACAATAGGCATGTC+TGG | + | chr5_4:23370369-23370388 | None:intergenic | 40.0% | |
| AATAGGTTATACGAGAGACG+AGG | - | chr5_4:23370549-23370568 | Msa0844760:CDS | 40.0% | |
| TTATACGAGAGACGAGGTAT+TGG | - | chr5_4:23370555-23370574 | Msa0844760:CDS | 40.0% | |
| ! | TATACGAGAGACGAGGTATT+GGG | - | chr5_4:23370556-23370575 | Msa0844760:CDS | 40.0% |
| !! | CGCAACTGTAGATTTTTAGG+TGG | - | chr5_4:23370580-23370599 | Msa0844760:intron | 40.0% |
| TCTTCACATATCACCTGTTC+GGG | - | chr5_4:23370889-23370908 | Msa0844760:intron | 40.0% | |
| AGCTTTCCCAACTCTTGTAT+CGG | + | chr5_4:23371105-23371124 | None:intergenic | 40.0% | |
| TACAAGAGTTGGGAAAGCTA+AGG | - | chr5_4:23371106-23371125 | Msa0844760:intron | 40.0% | |
| GAAAAGCTAAAATCCTAGCC+AGG | - | chr5_4:23371238-23371257 | Msa0844760:intron | 40.0% | |
| TTCCTGAAATAGATCATCCC+TGG | + | chr5_4:23371259-23371278 | None:intergenic | 40.0% | |
| ACTTGGGGAAACTAAAAGCA+AGG | + | chr5_4:23371937-23371956 | None:intergenic | 40.0% | |
| ! | GGGACTCTTTTATTGCACAA+AGG | + | chr5_4:23372024-23372043 | None:intergenic | 40.0% |
| GGGAATTTGAGGGAAAATCA+AGG | + | chr5_4:23372045-23372064 | None:intergenic | 40.0% | |
| CTAAAAGTGGAGGGAATTTG+AGG | + | chr5_4:23372056-23372075 | None:intergenic | 40.0% | |
| TTAGTCCTCCACTTCTCAAT+TGG | + | chr5_4:23372146-23372165 | None:intergenic | 40.0% | |
| ATCAAGCAATTGAGAAGTGG+AGG | - | chr5_4:23372257-23372276 | Msa0844760:intron | 40.0% | |
| ! | TCTAGGCTTGGTTGTTTAGA+AGG | - | chr5_4:23372447-23372466 | Msa0844760:intron | 40.0% |
| ! | GGTTACTAAGTTAAGCGTTG+TGG | - | chr5_4:23372661-23372680 | Msa0844760:CDS | 40.0% |
| GCTTAAGTGTAAGTTTAGGC+AGG | + | chr5_4:23372776-23372795 | None:intergenic | 40.0% | |
| GCAGAAGTGAAACCCATATA+TGG | + | chr5_4:23373009-23373028 | None:intergenic | 40.0% | |
| GGAAATTTCGGTAACAGTGT+CGG | - | chr5_4:23373060-23373079 | Msa0844760:CDS | 40.0% | |
| GAAATTTCGGTAACAGTGTC+GGG | - | chr5_4:23373061-23373080 | Msa0844760:CDS | 40.0% | |
| AGAAGACGCCTATAAAAACG+AGG | - | chr5_4:23373148-23373167 | Msa0844760:CDS | 40.0% | |
| ACGAGGAATATAGACAGTGT+TGG | - | chr5_4:23373165-23373184 | Msa0844760:CDS | 40.0% | |
| ATGAAACAGCTTAGTGTGGT+TGG | - | chr5_4:23373197-23373216 | Msa0844760:CDS | 40.0% | |
| AGTCATAGGATTACTGATGG+TGG | - | chr5_4:23373276-23373295 | Msa0844760:five_prime_UTR | 40.0% | |
| !!! | GATGGTGGATTTTTTGCCTT+TGG | - | chr5_4:23373291-23373310 | Msa0844760:five_prime_UTR | 40.0% |
| !!! | TCGATGGAGCAACGTTTTTT+GGG | + | chr5_4:23373356-23373375 | None:intergenic | 40.0% |
| AAATGGAGAAAGGTGGGGAA+GGG | + | chr5_4:23367510-23367529 | None:intergenic | 45.0% | |
| TTCCCCACCTTTCTCCATTT+GGG | - | chr5_4:23367510-23367529 | Msa0844760:three_prime_UTR | 45.0% | |
| ACTCCCAAATGGAGAAAGGT+GGG | + | chr5_4:23367516-23367535 | None:intergenic | 45.0% | |
| CTAGACTCCCAAATGGAGAA+AGG | + | chr5_4:23367520-23367539 | None:intergenic | 45.0% | |
| TGTGTGACTAGACTCCCAAA+TGG | + | chr5_4:23367527-23367546 | None:intergenic | 45.0% | |
| TGGGGTGTGATGAGGAAAAT+GGG | + | chr5_4:23367680-23367699 | None:intergenic | 45.0% | |
| TTGGGGTGTGATGAGGAAAA+TGG | + | chr5_4:23367681-23367700 | None:intergenic | 45.0% | |
| !! | GTGGTTTGAAAGTGATGGGT+CGG | + | chr5_4:23368024-23368043 | None:intergenic | 45.0% |
| CGTGGCTAGCGAAGATTATT+GGG | + | chr5_4:23368046-23368065 | None:intergenic | 45.0% | |
| GACGAAGTTCTTGGTAGAAG+TGG | - | chr5_4:23368095-23368114 | Msa0844760:intron | 45.0% | |
| TGGTTCCATGTTTCAAGGTC+CGG | - | chr5_4:23368115-23368134 | Msa0844760:intron | 45.0% | |
| ! | GAGAGAAGCGAACGTTGTTT+TGG | - | chr5_4:23368187-23368206 | Msa0844760:intron | 45.0% |
| !! | AAAAAACGGCACGCCGTTTT+GGG | - | chr5_4:23368220-23368239 | Msa0844760:intron | 45.0% |
| !! | TTAAGGGTTTATGGTGGTGG+TGG | - | chr5_4:23368323-23368342 | Msa0844760:intron | 45.0% |
| TTCGTCGTGTTTCTTCTTCC+AGG | - | chr5_4:23368426-23368445 | Msa0844760:intron | 45.0% | |
| CAATGCTGCAGAACTTCACT+CGG | - | chr5_4:23368784-23368803 | Msa0844760:intron | 45.0% | |
| ATCACGGTGCAGTTGTGATT+TGG | - | chr5_4:23368998-23369017 | Msa0844760:intron | 45.0% | |
| GTTAAGCTCCCAACTACACT+TGG | - | chr5_4:23369085-23369104 | Msa0844760:intron | 45.0% | |
| ! | ATGTGTCATGCCACTTGTGT+AGG | - | chr5_4:23369297-23369316 | Msa0844760:intron | 45.0% |
| TCATGCATTGCCTACACAAG+TGG | + | chr5_4:23369310-23369329 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr5_4:23369555-23369574 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr5_4:23369556-23369575 | None:intergenic | 45.0% |
| AACCCACTATAGCCAGTTGA+CGG | - | chr5_4:23370124-23370143 | Msa0844760:intron | 45.0% | |
| ATAGGCATGTCTGGCAAATG+TGG | + | chr5_4:23370360-23370379 | None:intergenic | 45.0% | |
| GCGTCACTGGCATAAACAAT+AGG | + | chr5_4:23370378-23370397 | None:intergenic | 45.0% | |
| !! | CAATTTCATGAAGGCGTCAC+TGG | + | chr5_4:23370391-23370410 | None:intergenic | 45.0% |
| GACGCCTTCATGAAATTGAC+AGG | - | chr5_4:23370393-23370412 | Msa0844760:CDS | 45.0% | |
| ! | GGCCGCAACTGTAGATTTTT+AGG | - | chr5_4:23370577-23370596 | Msa0844760:intron | 45.0% |
| GAAATAGATCATCCCTGGCT+AGG | + | chr5_4:23371254-23371273 | None:intergenic | 45.0% | |
| AGCCAGGGATGATCTATTTC+AGG | - | chr5_4:23371254-23371273 | Msa0844760:intron | 45.0% | |
| ! | TAGTAGTTGGGGCACCTATT+AGG | - | chr5_4:23371906-23371925 | Msa0844760:intron | 45.0% |
| CTATTTCGGTCCCTCACTTA+TGG | - | chr5_4:23372098-23372117 | Msa0844760:intron | 45.0% | |
| TCAATTGGACACAACCACGA+TGG | + | chr5_4:23372131-23372150 | None:intergenic | 45.0% | |
| GGTTGTGTCCAATTGAGAAG+TGG | - | chr5_4:23372135-23372154 | Msa0844760:intron | 45.0% | |
| TGTGTCCAATTGAGAAGTGG+AGG | - | chr5_4:23372138-23372157 | Msa0844760:intron | 45.0% | |
| TCTAGGCTTGGCTGTTAAGA+AGG | - | chr5_4:23372349-23372368 | Msa0844760:intron | 45.0% | |
| GAATACAATTGGGGAGAGCA+GGG | + | chr5_4:23372524-23372543 | None:intergenic | 45.0% | |
| TGAATACAATTGGGGAGAGC+AGG | + | chr5_4:23372525-23372544 | None:intergenic | 45.0% | |
| AGTTTAGGCAGGCAGAACAA+TGG | + | chr5_4:23372765-23372784 | None:intergenic | 45.0% | |
| !! | GTGATGGACAAGCATGGTTT+AGG | + | chr5_4:23372816-23372835 | None:intergenic | 45.0% |
| !! | AGAAGAGTGATGGACAAGCA+TGG | + | chr5_4:23372822-23372841 | None:intergenic | 45.0% |
| CAGGGAGAAAAGAAGAGTGA+TGG | + | chr5_4:23372832-23372851 | None:intergenic | 45.0% | |
| ! | CATCACTCTTCTTTTCTCCC+TGG | - | chr5_4:23372830-23372849 | Msa0844760:CDS | 45.0% |
| AGGAGTTTATCCATGTCTGC+TGG | - | chr5_4:23373239-23373258 | Msa0844760:five_prime_UTR | 45.0% | |
| CTTTGATGAACCAGCAGACA+TGG | + | chr5_4:23373252-23373271 | None:intergenic | 45.0% | |
| !!! | CGATGGAGCAACGTTTTTTG+GGG | + | chr5_4:23373355-23373374 | None:intergenic | 45.0% |
| !!! | CTCGATGGAGCAACGTTTTT+TGG | + | chr5_4:23373357-23373376 | None:intergenic | 45.0% |
| CAAATGGAGAAAGGTGGGGA+AGG | + | chr5_4:23367511-23367530 | None:intergenic | 50.0% | |
| CTTCCCCACCTTTCTCCATT+TGG | - | chr5_4:23367509-23367528 | Msa0844760:three_prime_UTR | 50.0% | |
| CTCCCAAATGGAGAAAGGTG+GGG | + | chr5_4:23367515-23367534 | None:intergenic | 50.0% | |
| GACTCCCAAATGGAGAAAGG+TGG | + | chr5_4:23367517-23367536 | None:intergenic | 50.0% | |
| GTGTGATGAGGAAAATGGGG+GGG | + | chr5_4:23367676-23367695 | None:intergenic | 50.0% | |
| GGTGTGATGAGGAAAATGGG+GGG | + | chr5_4:23367677-23367696 | None:intergenic | 50.0% | |
| GGGTGTGATGAGGAAAATGG+GGG | + | chr5_4:23367678-23367697 | None:intergenic | 50.0% | |
| GGGGTGTGATGAGGAAAATG+GGG | + | chr5_4:23367679-23367698 | None:intergenic | 50.0% | |
| TATGGGATTGGGGTGTGATG+AGG | + | chr5_4:23367688-23367707 | None:intergenic | 50.0% | |
| !! | GTCAAGTTGGCATGGTTGGA+AGG | + | chr5_4:23367727-23367746 | None:intergenic | 50.0% |
| GATGGGTCGGTGATTGTGAA+TGG | + | chr5_4:23368011-23368030 | None:intergenic | 50.0% | |
| GGCTAGCGAAGATTATTGGG+TGG | + | chr5_4:23368043-23368062 | None:intergenic | 50.0% | |
| GCGTGGCTAGCGAAGATTAT+TGG | + | chr5_4:23368047-23368066 | None:intergenic | 50.0% | |
| CAGTGATGTTGAGAAACGCG+TGG | + | chr5_4:23368064-23368083 | None:intergenic | 50.0% | |
| CACGCGTTTCTCAACATCAC+TGG | - | chr5_4:23368062-23368081 | Msa0844760:intron | 50.0% | |
| ! | GAAAAAACGGCACGCCGTTT+TGG | - | chr5_4:23368219-23368238 | Msa0844760:intron | 50.0% |
| !! | ACATGCACTTGGTGCGTTTG+TGG | - | chr5_4:23368906-23368925 | Msa0844760:intron | 50.0% |
| TGGTGCGTTTGTGGTGAGTT+TGG | - | chr5_4:23368915-23368934 | Msa0844760:intron | 50.0% | |
| TGGTGAGTTTGGCACAACCA+CGG | - | chr5_4:23368926-23368945 | Msa0844760:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr5_4:23369551-23369570 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr5_4:23369557-23369576 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr5_4:23369554-23369573 | Msa0844760:intron | 50.0% | |
| AACACCAGTTGCCCCTTTGA+GGG | - | chr5_4:23369675-23369694 | Msa0844760:intron | 50.0% | |
| ACCCACTATAGCCAGTTGAC+GGG | - | chr5_4:23370125-23370144 | Msa0844760:intron | 50.0% | |
| TCCCGTCAACTGGCTATAGT+GGG | + | chr5_4:23370129-23370148 | None:intergenic | 50.0% | |
| TTCCCGTCAACTGGCTATAG+TGG | + | chr5_4:23370130-23370149 | None:intergenic | 50.0% | |
| TAGCCAGTTGACGGGAAGAT+TGG | - | chr5_4:23370133-23370152 | Msa0844760:intron | 50.0% | |
| ACACCAATCTTCCCGTCAAC+TGG | + | chr5_4:23370139-23370158 | None:intergenic | 50.0% | |
| AGATGCAGCAATCCTGACGT+GGG | - | chr5_4:23370167-23370186 | Msa0844760:intron | 50.0% | |
| CAGTTGTAGTGCAGAGTCGT+CGG | + | chr5_4:23370614-23370633 | None:intergenic | 50.0% | |
| TTTCCAGTAGCATCCCGAAC+AGG | + | chr5_4:23370905-23370924 | None:intergenic | 50.0% | |
| TGTTCGGGATGCTACTGGAA+AGG | - | chr5_4:23370904-23370923 | Msa0844760:intron | 50.0% | |
| AGGAGAACCAGAGTCTCATC+AGG | + | chr5_4:23371648-23371667 | None:intergenic | 50.0% | |
| TGGTTGGGGACCATAAGTGA+GGG | + | chr5_4:23372111-23372130 | None:intergenic | 50.0% | |
| ATGGTTGGGGACCATAAGTG+AGG | + | chr5_4:23372112-23372131 | None:intergenic | 50.0% | |
| TGGACACAACCACGATGGTT+GGG | + | chr5_4:23372126-23372145 | None:intergenic | 50.0% | |
| TTGGACACAACCACGATGGT+TGG | + | chr5_4:23372127-23372146 | None:intergenic | 50.0% | |
| TCTCCCAATCACGAGACTTG+AGG | - | chr5_4:23372287-23372306 | Msa0844760:intron | 50.0% | |
| CTCCCAATCACGAGACTTGA+GGG | - | chr5_4:23372288-23372307 | Msa0844760:intron | 50.0% | |
| GTCCCTCAAGTCTCGTGATT+GGG | + | chr5_4:23372293-23372312 | None:intergenic | 50.0% | |
| AGTCCCTCAAGTCTCGTGAT+TGG | + | chr5_4:23372294-23372313 | None:intergenic | 50.0% | |
| GCAGGCAGAACAATGGAACA+TGG | + | chr5_4:23372758-23372777 | None:intergenic | 50.0% | |
| ! | TAGTGTGGTTGGTGCAGTCA+AGG | - | chr5_4:23373208-23373227 | Msa0844760:exon | 50.0% |
| TGTCGCCGGACCTTGAAACA+TGG | + | chr5_4:23368123-23368142 | None:intergenic | 55.0% | |
| GACATGTCGTAGGTCGGTGA+TGG | - | chr5_4:23368139-23368158 | Msa0844760:intron | 55.0% | |
| !! | AGGGTTTATGGTGGTGGTGG+TGG | - | chr5_4:23368326-23368345 | Msa0844760:intron | 55.0% |
| !! | GTTTATGGTGGTGGTGGTGG+TGG | - | chr5_4:23368329-23368348 | Msa0844760:intron | 55.0% |
| !! | TGGTGGTGGTGGTTCTGTTG+TGG | - | chr5_4:23368340-23368359 | Msa0844760:intron | 55.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr5_4:23369543-23369562 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr5_4:23369542-23369561 | Msa0844760:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr5_4:23369543-23369562 | Msa0844760:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr5_4:23369549-23369568 | Msa0844760:intron | 55.0% | |
| !! | AGGGGCAACTGGTGTTGCTT+CGG | + | chr5_4:23369671-23369690 | None:intergenic | 55.0% |
| CAACACCAGTTGCCCCTTTG+AGG | - | chr5_4:23369674-23369693 | Msa0844760:intron | 55.0% | |
| TAGTCCCTCAAAGGGGCAAC+TGG | + | chr5_4:23369682-23369701 | None:intergenic | 55.0% | |
| TCATCATCACTTGCCTCGCG+TGG | + | chr5_4:23370059-23370078 | None:intergenic | 55.0% | |
| ! | GCGAGGCAAGTGATGATGAG+AGG | - | chr5_4:23370060-23370079 | Msa0844760:intron | 55.0% |
| !! | GAGAAGTGCTGTGACTGCCA+TGG | - | chr5_4:23370082-23370101 | Msa0844760:intron | 55.0% |
| GAGATGCAGCAATCCTGACG+TGG | - | chr5_4:23370166-23370185 | Msa0844760:intron | 55.0% | |
| GAGCTAAGAAGACCCACGTC+AGG | + | chr5_4:23370182-23370201 | None:intergenic | 55.0% | |
| CGACGACTCTGCACTACAAC+TGG | - | chr5_4:23370612-23370631 | Msa0844760:intron | 55.0% | |
| TCACCTGTTCGGGATGCTAC+TGG | - | chr5_4:23370899-23370918 | Msa0844760:intron | 55.0% | |
| CTTATGGTCCCCAACCATCG+TGG | - | chr5_4:23372114-23372133 | Msa0844760:intron | 55.0% | |
| GGACACAACCACGATGGTTG+GGG | + | chr5_4:23372125-23372144 | None:intergenic | 55.0% | |
| GTGCAGTCAAGGTTGCAGTG+AGG | - | chr5_4:23373219-23373238 | Msa0844760:exon | 55.0% | |
| CTTCGAGTGATTCTCGCGCG+TGG | + | chr5_4:23367971-23367990 | None:intergenic | 60.0% | |
| TTCGCGCGCGACGAAGTTCT+TGG | - | chr5_4:23368086-23368105 | Msa0844760:intron | 60.0% | |
| AAGGTCCGGCGACATGTCGT+AGG | - | chr5_4:23368129-23368148 | Msa0844760:intron | 60.0% | |
| TCCGGCGACATGTCGTAGGT+CGG | - | chr5_4:23368133-23368152 | Msa0844760:intron | 60.0% | |
| ACCGACCTACGACATGTCGC+CGG | + | chr5_4:23368137-23368156 | None:intergenic | 60.0% | |
| GGAGAGTGAAGAGCCACGCG+AGG | - | chr5_4:23370043-23370062 | Msa0844760:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 23367507 | 23373640 | 23367507 | ID=Msa0844760;Name=Msa0844760 |
| chr5_4 | mRNA | 23367507 | 23373640 | 23367507 | ID=Msa0844760-mRNA-1;Parent=Msa0844760;Name=Msa0844760-mRNA-1;_AED=0.09;_eAED=0.09;_QI=420|0.8|0.66|1|1|1|6|363|434 |
| chr5_4 | exon | 23367507 | 23368025 | 23367507 | ID=Msa0844760-mRNA-1:exon:9510;Parent=Msa0844760-mRNA-1 |
| chr5_4 | exon | 23370222 | 23370431 | 23370222 | ID=Msa0844760-mRNA-1:exon:9509;Parent=Msa0844760-mRNA-1 |
| chr5_4 | exon | 23370514 | 23370593 | 23370514 | ID=Msa0844760-mRNA-1:exon:9508;Parent=Msa0844760-mRNA-1 |
| chr5_4 | exon | 23370733 | 23370840 | 23370733 | ID=Msa0844760-mRNA-1:exon:9507;Parent=Msa0844760-mRNA-1 |
| chr5_4 | exon | 23370926 | 23371108 | 23370926 | ID=Msa0844760-mRNA-1:exon:9506;Parent=Msa0844760-mRNA-1 |
| chr5_4 | exon | 23372653 | 23373640 | 23372653 | ID=Msa0844760-mRNA-1:exon:9505;Parent=Msa0844760-mRNA-1 |
| chr5_4 | five_prime_UTR | 23373221 | 23373640 | 23373221 | ID=Msa0844760-mRNA-1:five_prime_utr;Parent=Msa0844760-mRNA-1 |
| chr5_4 | CDS | 23372653 | 23373220 | 23372653 | ID=Msa0844760-mRNA-1:cds;Parent=Msa0844760-mRNA-1 |
| chr5_4 | CDS | 23370926 | 23371108 | 23370926 | ID=Msa0844760-mRNA-1:cds;Parent=Msa0844760-mRNA-1 |
| chr5_4 | CDS | 23370733 | 23370840 | 23370733 | ID=Msa0844760-mRNA-1:cds;Parent=Msa0844760-mRNA-1 |
| chr5_4 | CDS | 23370514 | 23370593 | 23370514 | ID=Msa0844760-mRNA-1:cds;Parent=Msa0844760-mRNA-1 |
| chr5_4 | CDS | 23370222 | 23370431 | 23370222 | ID=Msa0844760-mRNA-1:cds;Parent=Msa0844760-mRNA-1 |
| chr5_4 | CDS | 23367870 | 23368025 | 23367870 | ID=Msa0844760-mRNA-1:cds;Parent=Msa0844760-mRNA-1 |
| chr5_4 | three_prime_UTR | 23367507 | 23367869 | 23367507 | ID=Msa0844760-mRNA-1:three_prime_utr;Parent=Msa0844760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
