AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0728950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0728950 MtrunA17_Chr5g0435721 95.760 283 12 0 1 283 92 374 3.72e-174 489
Msa0728950 MtrunA17_Chr3g0112291 60.884 294 86 7 1 283 1 276 5.80e-117 341
Msa0728950 MtrunA17_Chr5g0396731 48.980 196 83 4 96 283 67 253 2.39e-52 174
Msa0728950 MtrunA17_Chr2g0299981 43.836 219 89 5 99 283 218 436 1.33e-49 172
Msa0728950 MtrunA17_Chr4g0070871 47.549 204 80 5 100 283 205 401 1.46e-49 171
Msa0728950 MtrunA17_Chr3g0135961 44.000 225 78 4 97 283 226 440 6.25e-49 170
Msa0728950 MtrunA17_Chr1g0150781 44.954 218 77 6 99 283 237 444 8.97e-49 169
Msa0728950 MtrunA17_Chr8g0389921 40.964 249 106 4 61 283 109 342 1.55e-47 164
Msa0728950 MtrunA17_Chr1g0158781 53.968 189 64 4 102 283 113 285 5.69e-47 161
Msa0728950 MtrunA17_Chr1g0150451 39.011 182 97 3 102 283 78 245 4.17e-30 115
Msa0728950 MtrunA17_Chr1g0212961 38.462 182 95 3 102 283 96 260 9.37e-30 115
Msa0728950 MtrunA17_Chr3g0136811 34.722 216 103 5 101 283 23 233 2.52e-29 114
Msa0728950 MtrunA17_Chr3g0136711 39.130 184 94 4 102 283 35 202 2.57e-29 112
Msa0728950 MtrunA17_Chr4g0001761 36.574 216 99 5 101 283 23 233 2.80e-29 114
Msa0728950 MtrunA17_Chr3g0126511 39.779 181 93 4 103 282 96 261 4.30e-29 113
Msa0728950 MtrunA17_Chr1g0150071 34.842 221 106 5 96 283 18 233 5.44e-29 113
Msa0728950 MtrunA17_Chr5g0430481 35.417 192 105 4 94 283 116 290 5.70e-25 102
Msa0728950 MtrunA17_Chr3g0105371 32.973 185 103 4 103 283 87 254 3.67e-24 99.8
Msa0728950 MtrunA17_Chr3g0105351 32.973 185 103 5 103 283 63 230 4.06e-23 96.7
Msa0728950 MtrunA17_Chr3g0138281 34.409 186 92 7 109 283 90 256 3.23e-19 86.7
Msa0728950 MtrunA17_Chr5g0407161 30.932 236 131 10 62 283 40 257 1.92e-18 84.3
Msa0728950 MtrunA17_Chr4g0065141 29.897 194 94 6 93 282 103 258 6.57e-18 82.8
Msa0728950 MtrunA17_Chr1g0171571 31.720 186 115 6 102 283 388 565 8.74e-18 83.2
Msa0728950 MtrunA17_Chr1g0194191 28.218 202 111 5 99 283 77 261 1.01e-17 82.4
Msa0728950 MtrunA17_Chr4g0050381 34.211 190 98 7 101 283 29 198 1.33e-17 80.9
Msa0728950 MtrunA17_Chr5g0426141 33.333 195 103 7 96 283 29 203 2.30e-17 80.1
Msa0728950 MtrunA17_Chr8g0360351 34.574 188 98 8 102 283 35 203 3.16e-17 79.7
Msa0728950 MtrunA17_Chr2g0279151 32.984 191 107 6 97 283 29 202 9.54e-17 78.2
Msa0728950 MtrunA17_Chr6g0486661 33.537 164 86 6 112 267 104 252 1.23e-15 77.0
Msa0728950 MtrunA17_Chr2g0293811 30.435 161 86 5 132 283 100 243 1.38e-15 75.9
Msa0728950 MtrunA17_Chr3g0127091 28.061 196 112 7 101 283 60 239 5.29e-14 71.6
Msa0728950 MtrunA17_Chr2g0317021 33.155 187 102 7 102 283 86 254 6.61e-14 70.9
Msa0728950 MtrunA17_Chr2g0295401 27.273 231 141 8 79 283 38 267 4.35e-13 68.6
Msa0728950 MtrunA17_Chr4g0051661 31.818 176 93 6 114 283 165 319 6.82e-13 68.2
Msa0728950 MtrunA17_Chr1g0151781 30.332 211 97 8 109 283 46 242 3.22e-12 65.9
Msa0728950 MtrunA17_Chr2g0286951 30.675 163 90 6 112 267 67 213 3.87e-12 65.9
Msa0728950 MtrunA17_Chr4g0066371 28.866 194 108 6 87 267 36 212 5.81e-12 65.5
Msa0728950 MtrunA17_Chr4g0067711 27.155 232 140 10 79 283 37 266 3.24e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0728950 AT3G11410.1 59.344 305 94 8 1 283 1 297 2.65e-109 322
Msa0728950 AT1G07430.1 64.865 222 69 3 71 283 88 309 7.89e-98 294
Msa0728950 AT2G29380.1 66.327 196 59 2 95 283 71 266 1.30e-92 278
Msa0728950 AT5G59220.2 61.905 231 70 6 67 283 71 297 3.18e-91 273
Msa0728950 AT5G59220.1 61.905 231 70 6 67 283 71 297 1.91e-89 272
Msa0728950 AT4G26080.1 49.758 207 65 3 100 283 127 317 9.35e-59 194
Msa0728950 AT5G57050.3 48.357 213 69 3 97 282 108 306 1.28e-57 187
Msa0728950 AT5G57050.2 48.131 214 70 3 97 283 68 267 9.14e-57 187
Msa0728950 AT5G57050.1 48.131 214 70 3 97 283 108 307 1.52e-56 187
Msa0728950 AT5G51760.2 47.393 211 74 5 100 283 77 277 3.18e-54 181
Msa0728950 AT5G51760.1 47.393 211 74 5 100 283 107 307 7.26e-54 180
Msa0728950 AT1G72770.2 42.982 228 99 2 87 283 175 402 2.86e-50 171
Msa0728950 AT1G72770.5 42.982 228 99 2 87 283 175 402 2.86e-50 171
Msa0728950 AT1G17550.1 40.755 265 110 5 64 283 140 402 3.17e-50 173
Msa0728950 AT1G17550.2 40.755 265 110 5 64 283 140 402 3.17e-50 173
Msa0728950 AT1G72770.4 42.982 228 99 2 87 283 175 402 1.38e-49 171
Msa0728950 AT1G72770.1 42.982 228 99 2 87 283 175 402 1.38e-49 171
Msa0728950 AT1G72770.3 42.982 228 99 2 87 283 175 402 1.38e-49 171
Msa0728950 AT1G43900.1 40.659 182 94 3 102 283 124 291 4.98e-32 122
Msa0728950 AT5G24940.1 38.043 184 96 3 102 283 34 201 7.90e-31 120
Msa0728950 AT5G10740.1 38.043 184 96 3 102 283 34 201 2.35e-30 117
Msa0728950 AT5G10740.2 38.043 184 96 3 102 283 34 201 2.35e-30 117
Msa0728950 AT1G67820.2 38.830 188 89 4 102 283 85 252 5.48e-30 117
Msa0728950 AT1G67820.1 38.919 185 93 3 102 283 121 288 7.78e-30 117
Msa0728950 AT4G31750.1 37.500 184 97 4 102 283 34 201 5.33e-28 110
Msa0728950 AT4G31750.3 37.500 184 97 4 102 283 34 201 5.33e-28 110
Msa0728950 AT4G31750.2 37.500 184 97 4 102 283 34 201 6.19e-28 109
Msa0728950 AT4G31860.2 35.023 217 101 6 101 283 23 233 8.03e-28 108
Msa0728950 AT4G31860.3 35.023 217 101 6 101 283 23 233 1.48e-27 108
Msa0728950 AT4G31860.1 35.023 217 101 6 101 283 23 233 4.32e-27 108
Msa0728950 AT5G53140.1 39.227 181 94 5 103 282 103 268 1.60e-25 105
Msa0728950 AT5G53140.2 39.227 181 94 5 103 282 103 268 1.60e-25 105
Msa0728950 AT2G25070.1 33.180 217 105 6 101 283 23 233 2.55e-25 103
Msa0728950 AT2G25070.2 33.180 217 105 6 101 283 23 233 2.55e-25 103
Msa0728950 AT2G30020.1 32.973 185 105 3 102 283 140 308 8.02e-23 97.4
Msa0728950 AT1G07160.1 32.000 200 103 5 94 283 115 291 6.63e-21 91.7
Msa0728950 AT2G40180.1 30.806 211 121 4 81 283 108 301 1.02e-19 88.6
Msa0728950 AT3G51470.1 33.146 178 98 6 109 283 80 239 4.02e-19 86.7
Msa0728950 AT3G51470.2 33.146 178 98 6 109 283 36 195 4.37e-19 85.9
Msa0728950 AT2G25620.1 29.344 259 154 8 35 283 24 263 6.76e-19 86.3
Msa0728950 AT2G25620.2 29.344 259 154 8 35 283 24 263 6.76e-19 86.3
Msa0728950 AT1G48040.1 32.941 170 104 5 116 283 99 260 3.02e-18 84.3
Msa0728950 AT2G40860.2 32.620 187 109 7 103 283 394 569 3.77e-18 84.7
Msa0728950 AT2G40860.1 32.620 187 109 7 103 283 394 569 4.40e-18 84.3
Msa0728950 AT2G40860.3 31.776 214 118 8 75 283 379 569 4.58e-18 84.3
Msa0728950 AT2G40860.4 32.620 187 109 7 103 283 296 471 4.93e-18 84.3
Msa0728950 AT2G20050.2 34.568 162 85 6 112 267 123 269 2.20e-17 82.8
Msa0728950 AT2G20050.1 34.568 162 85 6 112 267 123 269 2.22e-17 82.8
Msa0728950 AT2G33700.1 33.553 152 83 4 132 283 123 256 5.30e-17 80.5
Msa0728950 AT1G78200.1 30.890 191 114 6 97 283 28 204 7.99e-17 79.0
Msa0728950 AT1G78200.3 30.890 191 114 6 97 283 28 204 7.99e-17 79.0
Msa0728950 AT1G78200.2 30.890 191 114 6 97 283 28 204 7.99e-17 79.0
Msa0728950 AT3G15260.2 32.632 190 99 8 102 283 42 210 1.48e-16 78.2
Msa0728950 AT3G15260.1 32.632 190 99 8 102 283 42 210 1.48e-16 78.2
Msa0728950 AT3G06270.1 35.152 165 80 7 112 267 68 214 4.86e-16 77.4
Msa0728950 AT3G17250.1 31.361 169 75 4 132 283 158 302 9.05e-16 77.4
Msa0728950 AT3G62260.2 31.351 185 108 6 109 283 86 261 2.04e-15 75.9
Msa0728950 AT3G62260.1 31.351 185 108 6 109 283 85 260 2.15e-15 75.9
Msa0728950 AT3G62260.3 32.530 166 101 5 120 283 15 171 5.37e-15 73.9
Msa0728950 AT1G78200.5 31.214 173 102 5 114 283 1 159 1.01e-14 72.4
Msa0728950 AT1G78200.4 31.214 173 102 5 114 283 1 159 1.01e-14 72.4
Msa0728950 AT5G26010.1 27.966 236 125 9 78 283 17 237 6.27e-14 71.2
Msa0728950 AT2G20630.1 34.177 158 78 6 132 283 63 200 1.16e-13 70.1
Msa0728950 AT2G20630.2 32.955 176 92 6 114 283 45 200 1.27e-13 70.1
Msa0728950 AT3G16800.2 28.870 239 121 12 79 283 39 262 2.29e-13 69.7
Msa0728950 AT3G16800.1 28.870 239 121 12 79 283 39 262 2.29e-13 69.7
Msa0728950 AT3G16800.3 28.870 239 121 12 79 283 39 262 2.29e-13 69.7
Msa0728950 AT4G28400.3 34.194 155 82 6 132 283 45 182 3.69e-13 68.2
Msa0728950 AT1G22280.2 32.911 158 81 7 96 247 28 166 4.17e-13 67.0
Msa0728950 AT4G28400.2 34.194 155 82 6 132 283 67 204 4.60e-13 67.8
Msa0728950 AT4G28400.1 34.194 155 82 6 132 283 67 204 5.09e-13 68.2
Msa0728950 AT1G18030.2 32.353 170 81 7 133 283 110 264 1.10e-12 67.4
Msa0728950 AT1G18030.1 32.353 170 81 7 133 283 110 264 1.48e-12 67.4
Msa0728950 AT2G34740.3 30.508 177 95 7 114 283 97 252 3.25e-12 66.2
Msa0728950 AT2G34740.2 30.508 177 95 7 114 283 115 270 4.19e-12 65.9
Msa0728950 AT2G34740.1 30.508 177 95 7 114 283 101 256 6.88e-12 65.5
Msa0728950 AT3G05640.2 28.689 244 125 11 76 283 33 263 4.26e-11 63.2
Msa0728950 AT3G05640.1 28.689 244 125 11 76 283 33 263 4.26e-11 63.2
Msa0728950 AT3G05640.3 28.689 244 125 11 76 283 33 263 4.26e-11 63.2
Msa0728950 AT5G27930.3 26.749 243 126 6 80 283 39 268 5.92e-11 62.4
Msa0728950 AT5G27930.1 26.749 243 126 6 80 283 39 268 8.94e-11 62.4
Msa0728950 AT5G27930.2 26.749 243 126 6 80 283 39 268 8.94e-11 62.4

Find 143 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGATGTTATTCCATATTT+TGG 0.103023 5_1:+35314153 None:intergenic
TAACAATTAATAATAGTAAT+AGG 0.207176 5_1:-35312642 Msa0728950:three_prime_UTR
GATCTAGCTTCTGTCGTTTC+CGG 0.236639 5_1:+35314313 None:intergenic
AAAATGGTTCTAAATTATTA+TGG 0.247686 5_1:-35313007 Msa0728950:three_prime_UTR
GGTGACTCCGCCGGGGTCTC+CGG 0.273090 5_1:-35312805 Msa0728950:three_prime_UTR
CTGGAGGACGTGTGATCTAT+TGG 0.287230 5_1:-35313497 Msa0728950:CDS
GAAGAATGTTCTCCAAAATA+TGG 0.293854 5_1:-35314165 Msa0728950:CDS
TACTTGCGAGTGATGGCTTA+TGG 0.304795 5_1:-35312890 Msa0728950:three_prime_UTR
ACCTTCCGGTCGCCGGAGTT+TGG 0.312597 5_1:-35314379 Msa0728950:CDS
CAATCAATTGAAATGGTGTT+TGG 0.324836 5_1:+35314552 None:intergenic
TAGGGATTGATTAATGGAAT+TGG 0.330985 5_1:-35312623 Msa0728950:three_prime_UTR
TAGTAATAGGGATTGATTAA+TGG 0.332759 5_1:-35312629 Msa0728950:three_prime_UTR
CGTATAAAGAAGACATATAT+TGG 0.345929 5_1:-35312322 Msa0728950:three_prime_UTR
CTTGAAGCCATATGTTATAT+CGG 0.354940 5_1:-35312961 Msa0728950:three_prime_UTR
GAGGAATGGCAACGCCGTTC+CGG 0.355461 5_1:+35313663 None:intergenic
TTTCCCGCCACTTCACTTCC+CGG 0.368693 5_1:+35312786 None:intergenic
TGGCAAAGGTGGGAGGAAAA+TGG 0.370084 5_1:-35312518 Msa0728950:three_prime_UTR
ATCACGATCAATAAGTAGTT+TGG 0.375346 5_1:+35313202 None:intergenic
AACAATTAATAATAGTAATA+GGG 0.379877 5_1:-35312641 Msa0728950:three_prime_UTR
TCCTCTTTCCACCGATCATA+AGG 0.382314 5_1:-35313645 Msa0728950:intron
AAGAAGACATATATTGGCTT+TGG 0.383889 5_1:-35312316 Msa0728950:three_prime_UTR
CTTATGACGTGCACTGTGTC+TGG 0.387925 5_1:-35312568 Msa0728950:three_prime_UTR
GGAAGTGAAGTGGCGGGAAA+AGG 0.392404 5_1:-35312783 Msa0728950:three_prime_UTR
TGTATCTTGTGGGAAACAAT+TGG 0.400205 5_1:-35312418 Msa0728950:three_prime_UTR
GAGAGGACGGTGACTCCGCC+GGG 0.408202 5_1:-35312813 Msa0728950:three_prime_UTR
GCGTGGTGGTTGTTGATTTG+AGG 0.416094 5_1:-35312683 Msa0728950:three_prime_UTR
CATTCTGGCGGTGGCGGTGG+TGG 0.416332 5_1:+35314276 None:intergenic
ATTCGCGAGCCGTTCTTTGC+CGG 0.418183 5_1:-35313682 Msa0728950:CDS
GGTCGTGAGCTTGGTTCAAC+TGG 0.425928 5_1:+35314399 None:intergenic
GAACCAAGCTCACGACCTTC+CGG 0.434793 5_1:-35314393 Msa0728950:CDS
TGAAACACAATCAATTGAAA+TGG 0.436412 5_1:+35314545 None:intergenic
TTGTGGAAGGAGAAAAGAAA+TGG 0.439029 5_1:-35314130 Msa0728950:CDS
TAGAGAAAGAGAAGGTTGAC+TGG 0.442226 5_1:-35313883 Msa0728950:CDS
AGGGTCAGATAAGGCGTGTT+CGG 0.445363 5_1:-35312763 Msa0728950:three_prime_UTR
GTGACTCCGCCGGGGTCTCC+GGG 0.447048 5_1:-35312804 Msa0728950:three_prime_UTR
TCGCATTCTGGCGGTGGCGG+TGG 0.451931 5_1:+35314273 None:intergenic
GCCATATGTTATATCGGAAC+CGG 0.452791 5_1:-35312955 Msa0728950:three_prime_UTR
TTCGGTGTTTACGACGGTCA+TGG 0.452798 5_1:-35314054 Msa0728950:CDS
CGAGCCGTTCTTTGCCGGAA+CGG 0.455015 5_1:-35313677 Msa0728950:CDS
AGTAGTGTAGTGTTTGATTG+AGG 0.455534 5_1:-35312455 Msa0728950:three_prime_UTR
ACTTGCGAGTGATGGCTTAT+GGG 0.459173 5_1:-35312889 Msa0728950:three_prime_UTR
ACAGTGCACGTCATAAGTTT+TGG 0.460932 5_1:+35312574 None:intergenic
TGTCGTTTCCGGCTATTCTC+CGG 0.464903 5_1:+35314324 None:intergenic
GGCATTGGCGAGGAATAGTT+CGG 0.467216 5_1:-35312715 Msa0728950:three_prime_UTR
TAGTGTTTGATTGAGGAGAA+AGG 0.469462 5_1:-35312448 Msa0728950:three_prime_UTR
GAAGTGAAGTGGCGGGAAAA+GGG 0.473008 5_1:-35312782 Msa0728950:three_prime_UTR
GGAGAGGACGGTGACTCCGC+CGG 0.475695 5_1:-35312814 Msa0728950:three_prime_UTR
CAATAATGATGCATAACGTA+TGG 0.476628 5_1:+35313031 None:intergenic
TCCGGTTCCGATATAACATA+TGG 0.479797 5_1:+35312954 None:intergenic
CATGTTTATATAATATATCA+TGG 0.480710 5_1:-35313276 Msa0728950:three_prime_UTR
CAAAGGTGGGAGGAAAATGG+TGG 0.487789 5_1:-35312515 Msa0728950:three_prime_UTR
AAAGTATGGCTAATCTCAAA+TGG 0.491505 5_1:+35312293 None:intergenic
TCCAACTCATCGGGTCGATC+CGG 0.491599 5_1:+35313534 None:intergenic
AGGTTAAAATTGTATCTTGT+GGG 0.492288 5_1:-35312428 Msa0728950:three_prime_UTR
TAAATCCAAACTCCGGCGAC+CGG 0.493888 5_1:+35314374 None:intergenic
TTAATCCGATCCAACTCATC+GGG 0.494629 5_1:+35313525 None:intergenic
TTTGTTGACGAAGTTGGCAT+TGG 0.495559 5_1:-35312730 Msa0728950:three_prime_UTR
AAGAAACATTTGTAGTGGTA+AGG 0.498226 5_1:+35314577 None:intergenic
TTAGCACAATATGTGTGGTA+TGG 0.499189 5_1:+35313060 None:intergenic
AAAATCATTGTTTCTAATTG+CGG 0.499926 5_1:-35313707 Msa0728950:CDS
CGACCGGAAGGTCGTGAGCT+TGG 0.505187 5_1:+35314390 None:intergenic
GGACAACCACGTATGAATCA+AGG 0.506508 5_1:+35313298 None:intergenic
AAAACAATTGATGTAAACTA+AGG 0.506596 5_1:-35312350 Msa0728950:three_prime_UTR
GCAAAACGACACGGCATGTA+GGG 0.509842 5_1:-35312859 Msa0728950:three_prime_UTR
TGGGATGGTGCAAGAGTGCT+TGG 0.516594 5_1:-35313477 Msa0728950:CDS
AACATTTGTAGTGGTAAGGT+GGG 0.517613 5_1:+35314581 None:intergenic
TGGAGGACGTGTGATCTATT+GGG 0.519957 5_1:-35313496 Msa0728950:CDS
CAGATCCACCGGAGAATAGC+CGG 0.520939 5_1:-35314332 Msa0728950:CDS
TTTACTACCGTTGAAATACA+TGG 0.522704 5_1:-35314355 Msa0728950:CDS
CTCTCCGTTATAGTTACCTC+CGG 0.523739 5_1:+35312936 None:intergenic
TTGGCCATGTCAAGAGCTAT+TGG 0.527221 5_1:-35313450 Msa0728950:CDS
GCTCACGACCTTCCGGTCGC+CGG 0.528939 5_1:-35314386 Msa0728950:CDS
GATCGTGATTCTAACACATC+CGG 0.530464 5_1:-35313188 Msa0728950:three_prime_UTR
AAACATTTGTAGTGGTAAGG+TGG 0.532395 5_1:+35314580 None:intergenic
ACTCCTCATTGTGATGCTGT+TGG 0.539210 5_1:-35313764 Msa0728950:CDS
TTGGATCGGATTAACAAAGC+TGG 0.539683 5_1:-35313516 Msa0728950:CDS
TCCAAACTCCGGCGACCGGA+AGG 0.540570 5_1:+35314378 None:intergenic
GAAATACATGGCAGATCCAC+CGG 0.540962 5_1:-35314343 Msa0728950:CDS
TATGGAATAACATCAGTTTG+TGG 0.541161 5_1:-35314147 Msa0728950:CDS
TTGCAACTATGTGTAAAGAA+AGG 0.542336 5_1:-35313931 Msa0728950:CDS
AAGGTTAAAATTGTATCTTG+TGG 0.544861 5_1:-35312429 Msa0728950:three_prime_UTR
GCCGGATCGACCCGATGAGT+TGG 0.547516 5_1:-35313535 Msa0728950:CDS
TGGAGAAGAAACATTTGTAG+TGG 0.550372 5_1:+35314572 None:intergenic
ATTACGATCTAACAACATGT+AGG 0.551001 5_1:+35313099 None:intergenic
GGGGTCTCCGGGAAGTGAAG+TGG 0.551828 5_1:-35312793 Msa0728950:three_prime_UTR
TGCAAGAGTGCTTGGAGTGT+TGG 0.556663 5_1:-35313469 Msa0728950:CDS
AGAAGAAATAGAGAAAGAGA+AGG 0.557787 5_1:-35313891 Msa0728950:CDS
GTGTCTCAAGGCGGAGAGGA+CGG 0.558698 5_1:-35312826 Msa0728950:three_prime_UTR
AACGCCGTTCCGGCAAAGAA+CGG 0.561662 5_1:+35313673 None:intergenic
AAGTACTGATGAAGAATCAA+AGG 0.567543 5_1:-35314226 Msa0728950:CDS
CAACTTCGTCAACAAAATTG+AGG 0.568402 5_1:+35312737 None:intergenic
ACTTCACTTCCCGGAGACCC+CGG 0.569577 5_1:+35312795 None:intergenic
ACCTTATGATCGGTGGAAAG+AGG 0.572974 5_1:+35313644 None:intergenic
GGCGGGAAAAGGGTCAGATA+AGG 0.576494 5_1:-35312772 Msa0728950:three_prime_UTR
GAGATTTGTTGTGGTGTAGT+CGG 0.577151 5_1:-35314444 Msa0728950:CDS
GTTTGGTATCACAATTGTGT+CGG 0.579017 5_1:+35313219 None:intergenic
GTTAATCCGATCCAACTCAT+CGG 0.579829 5_1:+35313524 None:intergenic
GTATTTGATTAGTTCAAATG+TGG 0.581359 5_1:-35313373 Msa0728950:three_prime_UTR
AATAAAACTAACCTTATGAT+CGG 0.584275 5_1:+35313634 None:intergenic
TGTTGTTGCCGTTGTTACGC+CGG 0.585472 5_1:-35313732 Msa0728950:CDS
TCAATGGCTGAGATTTGTTG+TGG 0.587476 5_1:-35314453 Msa0728950:CDS
TCTCCGGGAAGTGAAGTGGC+GGG 0.590927 5_1:-35312789 Msa0728950:three_prime_UTR
AAAACTAACCTTATGATCGG+TGG 0.595604 5_1:+35313637 None:intergenic
GTCTCCGGGAAGTGAAGTGG+CGG 0.597167 5_1:-35312790 Msa0728950:three_prime_UTR
TGTCTGATACTTGCGAGTGA+TGG 0.597668 5_1:-35312897 Msa0728950:three_prime_UTR
CAATATGTGTGGTATGGCGA+TGG 0.597807 5_1:+35313066 None:intergenic
CATGATATATTATATAAACA+TGG 0.599512 5_1:+35313277 None:intergenic
AAGGTGGGAGGAAAATGGTG+GGG 0.600490 5_1:-35312513 Msa0728950:three_prime_UTR
ATCGACCCGATGAGTTGGAT+CGG 0.600754 5_1:-35313530 Msa0728950:CDS
AAAGGTGGGAGGAAAATGGT+GGG 0.606076 5_1:-35312514 Msa0728950:three_prime_UTR
GAATAACATCAGTTTGTGGA+AGG 0.606086 5_1:-35314143 Msa0728950:CDS
GACAACCACGTATGAATCAA+GGG 0.607178 5_1:+35313299 None:intergenic
ATGATCGGTGGAAAGAGGAA+TGG 0.609265 5_1:+35313649 None:intergenic
CGTTTCCGGCTATTCTCCGG+TGG 0.614168 5_1:+35314327 None:intergenic
CATTTCTTCGGTGTTTACGA+CGG 0.617073 5_1:-35314060 Msa0728950:CDS
GGTGGTGCAGATGTGTCTCA+AGG 0.619444 5_1:-35312838 Msa0728950:three_prime_UTR
GGAACCGGAGGTAACTATAA+CGG 0.620933 5_1:-35312940 Msa0728950:three_prime_UTR
TGCAAAACGACACGGCATGT+AGG 0.625098 5_1:-35312860 Msa0728950:three_prime_UTR
TCTGGACACCTATGATTCGT+AGG 0.628838 5_1:-35312550 Msa0728950:three_prime_UTR
GGATCTGCCATGTATTTCAA+CGG 0.632939 5_1:+35314348 None:intergenic
TTCGGACAATGTTAGCGTGG+TGG 0.640919 5_1:-35312697 Msa0728950:three_prime_UTR
TGACGAAGTTGGCATTGGCG+AGG 0.644130 5_1:-35312725 Msa0728950:three_prime_UTR
GAGTGATGGCTTATGGGACG+TGG 0.646730 5_1:-35312883 Msa0728950:three_prime_UTR
TAGTTCGGACAATGTTAGCG+TGG 0.649801 5_1:-35312700 Msa0728950:three_prime_UTR
GAACCAACAGCATCACAATG+AGG 0.652964 5_1:+35313761 None:intergenic
CTCACCAATAGCTCTTGACA+TGG 0.655791 5_1:+35313446 None:intergenic
AAACGACACGGCATGTAGGG+TGG 0.658006 5_1:-35312856 Msa0728950:three_prime_UTR
GGACGTGGTGCAAAACGACA+CGG 0.659962 5_1:-35312868 Msa0728950:three_prime_UTR
ACTACACTACTAAAATCACA+TGG 0.660829 5_1:+35312467 None:intergenic
ACATTTGTAGTGGTAAGGTG+GGG 0.664194 5_1:+35314582 None:intergenic
ACGGTAGTAAATCCAAACTC+CGG 0.667701 5_1:+35314367 None:intergenic
TGTTACCCTTGATTCATACG+TGG 0.670564 5_1:-35313304 Msa0728950:three_prime_UTR
GATCGGATTAACAAAGCTGG+AGG 0.678968 5_1:-35313513 Msa0728950:CDS
GGTTGACTGGAAGTCAACGA+TGG 0.683076 5_1:-35313870 Msa0728950:CDS
ATATGTTATATCGGAACCGG+AGG 0.683158 5_1:-35312952 Msa0728950:three_prime_UTR
AGATGTGTCTCAAGGCGGAG+AGG 0.686437 5_1:-35312830 Msa0728950:three_prime_UTR
GGACGTGTGATCTATTGGGA+TGG 0.690438 5_1:-35313492 Msa0728950:CDS
AGAGGACGGTGACTCCGCCG+GGG 0.704487 5_1:-35312812 Msa0728950:three_prime_UTR
GGTGGTGGTGATGAAACAGA+TGG 0.710550 5_1:+35314291 None:intergenic
GGTGCAGATGTGTCTCAAGG+CGG 0.721838 5_1:-35312835 Msa0728950:three_prime_UTR
CGGAGGTAACTATAACGGAG+AGG 0.725334 5_1:-35312935 Msa0728950:three_prime_UTR
TCACTTCCCGGAGACCCCGG+CGG 0.744978 5_1:+35312798 None:intergenic
TATAACGGAGAGGAGTGACG+AGG 0.759781 5_1:-35312925 Msa0728950:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTTATTAATTTTT+TGG - chr5_1:35313494-35313513 Msa0728950:CDS 0.0%
!!! TTTAAAATTTATTAATTTTT+TGG - chr5_1:35313494-35313513 Msa0728950:CDS 0.0%
!! AAAAAAAATGATTATGATAA+CGG + chr5_1:35312894-35312913 None:intergenic 10.0%
!! TAACAATTAATAATAGTAAT+AGG - chr5_1:35314247-35314266 Msa0728950:CDS 10.0%
!! AACAATTAATAATAGTAATA+GGG - chr5_1:35314248-35314267 Msa0728950:CDS 10.0%
!! AAAAAAAATGATTATGATAA+CGG + chr5_1:35312894-35312913 None:intergenic 10.0%
!! TAACAATTAATAATAGTAAT+AGG - chr5_1:35314247-35314266 Msa0728950:CDS 10.0%
!! AACAATTAATAATAGTAATA+GGG - chr5_1:35314248-35314267 Msa0728950:CDS 10.0%
!!! ATCATAATCATTTTTTTTAG+TGG - chr5_1:35312896-35312915 Msa0728950:three_prime_UTR 15.0%
!! CATGATATATTATATAAACA+TGG + chr5_1:35313615-35313634 None:intergenic 15.0%
!! CATGTTTATATAATATATCA+TGG - chr5_1:35313613-35313632 Msa0728950:intron 15.0%
!!! AAAATGGTTCTAAATTATTA+TGG - chr5_1:35313882-35313901 Msa0728950:CDS 15.0%
!!! TTATTATGGTTTATTTTTGT+AGG - chr5_1:35313896-35313915 Msa0728950:CDS 15.0%
!!! TATTATGGTTTATTTTTGTA+GGG - chr5_1:35313897-35313916 Msa0728950:CDS 15.0%
!!! ATCATAATCATTTTTTTTAG+TGG - chr5_1:35312896-35312915 Msa0728950:three_prime_UTR 15.0%
!! CATGATATATTATATAAACA+TGG + chr5_1:35313615-35313634 None:intergenic 15.0%
!! CATGTTTATATAATATATCA+TGG - chr5_1:35313613-35313632 Msa0728950:intron 15.0%
!!! AAAATGGTTCTAAATTATTA+TGG - chr5_1:35313882-35313901 Msa0728950:CDS 15.0%
!!! TTATTATGGTTTATTTTTGT+AGG - chr5_1:35313896-35313915 Msa0728950:CDS 15.0%
!!! TATTATGGTTTATTTTTGTA+GGG - chr5_1:35313897-35313916 Msa0728950:CDS 15.0%
!!! AAAATCATTGTTTCTAATTG+CGG - chr5_1:35313182-35313201 Msa0728950:three_prime_UTR 20.0%
!! AATAAAACTAACCTTATGAT+CGG + chr5_1:35313258-35313277 None:intergenic 20.0%
!! TATGCATCATTATTGAAAAA+TGG - chr5_1:35313866-35313885 Msa0728950:CDS 20.0%
!!! ATTATGGTTTATTTTTGTAG+GGG - chr5_1:35313898-35313917 Msa0728950:CDS 20.0%
!! AAAACAATTGATGTAAACTA+AGG - chr5_1:35314539-35314558 Msa0728950:five_prime_UTR 20.0%
!!! AAAATCATTGTTTCTAATTG+CGG - chr5_1:35313182-35313201 Msa0728950:three_prime_UTR 20.0%
!! AATAAAACTAACCTTATGAT+CGG + chr5_1:35313258-35313277 None:intergenic 20.0%
!! TATGCATCATTATTGAAAAA+TGG - chr5_1:35313866-35313885 Msa0728950:CDS 20.0%
!!! ATTATGGTTTATTTTTGTAG+GGG - chr5_1:35313898-35313917 Msa0728950:CDS 20.0%
!! AAAACAATTGATGTAAACTA+AGG - chr5_1:35314539-35314558 Msa0728950:five_prime_UTR 20.0%
! TGAAACACAATCAATTGAAA+TGG + chr5_1:35312347-35312366 None:intergenic 25.0%
!!! CATCATTCAATTTTGATCAA+TGG - chr5_1:35312420-35312439 Msa0728950:three_prime_UTR 25.0%
!! ACTGATGTTATTCCATATTT+TGG + chr5_1:35312739-35312758 None:intergenic 25.0%
! GAAAAACAAGATCATTTCTT+CGG - chr5_1:35312817-35312836 Msa0728950:three_prime_UTR 25.0%
!!! AGTGGATCTGTTTTTTAATT+AGG - chr5_1:35312914-35312933 Msa0728950:three_prime_UTR 25.0%
!! TTTTATTAGAATGGATGAAG+AGG - chr5_1:35313049-35313068 Msa0728950:three_prime_UTR 25.0%
!! TTAGAAACAATGATTTTCTC+CGG + chr5_1:35313179-35313198 None:intergenic 25.0%
!! GTATTTGATTAGTTCAAATG+TGG - chr5_1:35313516-35313535 Msa0728950:CDS 25.0%
!! TTGTGCATGATTTCATTTTA+CGG - chr5_1:35313539-35313558 Msa0728950:intron 25.0%
!! TATGATATTTTGTATCACAC+CGG + chr5_1:35313723-35313742 None:intergenic 25.0%
!!! TTTTTTTAGCACAATATGTG+TGG + chr5_1:35313837-35313856 None:intergenic 25.0%
! TAGTAATAGGGATTGATTAA+TGG - chr5_1:35314260-35314279 Msa0728950:CDS 25.0%
! TAAAAAATCCTACGAATCAT+AGG + chr5_1:35314350-35314369 None:intergenic 25.0%
!!! TGATTCGTAGGATTTTTTAT+TGG - chr5_1:35314351-35314370 Msa0728950:CDS 25.0%
! AATCATCAGAAAAAATCTCA+AGG + chr5_1:35314402-35314421 None:intergenic 25.0%
! AAGGTTAAAATTGTATCTTG+TGG - chr5_1:35314460-35314479 Msa0728950:exon 25.0%
! AGGTTAAAATTGTATCTTGT+GGG - chr5_1:35314461-35314480 Msa0728950:exon 25.0%
! CGTATAAAGAAGACATATAT+TGG - chr5_1:35314567-35314586 Msa0728950:five_prime_UTR 25.0%
! TGAAACACAATCAATTGAAA+TGG + chr5_1:35312347-35312366 None:intergenic 25.0%
!!! CATCATTCAATTTTGATCAA+TGG - chr5_1:35312420-35312439 Msa0728950:three_prime_UTR 25.0%
!! ACTGATGTTATTCCATATTT+TGG + chr5_1:35312739-35312758 None:intergenic 25.0%
! GAAAAACAAGATCATTTCTT+CGG - chr5_1:35312817-35312836 Msa0728950:three_prime_UTR 25.0%
!!! AGTGGATCTGTTTTTTAATT+AGG - chr5_1:35312914-35312933 Msa0728950:three_prime_UTR 25.0%
!! TTTTATTAGAATGGATGAAG+AGG - chr5_1:35313049-35313068 Msa0728950:three_prime_UTR 25.0%
!! TTAGAAACAATGATTTTCTC+CGG + chr5_1:35313179-35313198 None:intergenic 25.0%
!! GTATTTGATTAGTTCAAATG+TGG - chr5_1:35313516-35313535 Msa0728950:CDS 25.0%
!! TTGTGCATGATTTCATTTTA+CGG - chr5_1:35313539-35313558 Msa0728950:intron 25.0%
!! TATGATATTTTGTATCACAC+CGG + chr5_1:35313723-35313742 None:intergenic 25.0%
!!! TTTTTTTAGCACAATATGTG+TGG + chr5_1:35313837-35313856 None:intergenic 25.0%
! TAGTAATAGGGATTGATTAA+TGG - chr5_1:35314260-35314279 Msa0728950:CDS 25.0%
! TAAAAAATCCTACGAATCAT+AGG + chr5_1:35314350-35314369 None:intergenic 25.0%
!!! TGATTCGTAGGATTTTTTAT+TGG - chr5_1:35314351-35314370 Msa0728950:CDS 25.0%
! AATCATCAGAAAAAATCTCA+AGG + chr5_1:35314402-35314421 None:intergenic 25.0%
! AAGGTTAAAATTGTATCTTG+TGG - chr5_1:35314460-35314479 Msa0728950:exon 25.0%
! AGGTTAAAATTGTATCTTGT+GGG - chr5_1:35314461-35314480 Msa0728950:exon 25.0%
! CGTATAAAGAAGACATATAT+TGG - chr5_1:35314567-35314586 Msa0728950:five_prime_UTR 25.0%
AAGAAACATTTGTAGTGGTA+AGG + chr5_1:35312315-35312334 None:intergenic 30.0%
CAATCAATTGAAATGGTGTT+TGG + chr5_1:35312340-35312359 None:intergenic 30.0%
TTTACTACCGTTGAAATACA+TGG - chr5_1:35312534-35312553 Msa0728950:three_prime_UTR 30.0%
!! AAGTACTGATGAAGAATCAA+AGG - chr5_1:35312663-35312682 Msa0728950:three_prime_UTR 30.0%
GAAGAATGTTCTCCAAAATA+TGG - chr5_1:35312724-35312743 Msa0728950:three_prime_UTR 30.0%
TATGGAATAACATCAGTTTG+TGG - chr5_1:35312742-35312761 Msa0728950:three_prime_UTR 30.0%
!! GGTTGATGTGTTTTTACTAT+AGG - chr5_1:35312935-35312954 Msa0728950:three_prime_UTR 30.0%
TTGCAACTATGTGTAAAGAA+AGG - chr5_1:35312958-35312977 Msa0728950:three_prime_UTR 30.0%
AGAAGAAATAGAGAAAGAGA+AGG - chr5_1:35312998-35313017 Msa0728950:three_prime_UTR 30.0%
!!! GGAGAAGAGTTTTATTAGAA+TGG - chr5_1:35313040-35313059 Msa0728950:three_prime_UTR 30.0%
ATCACGATCAATAAGTAGTT+TGG + chr5_1:35313690-35313709 None:intergenic 30.0%
ATTACGATCTAACAACATGT+AGG + chr5_1:35313793-35313812 None:intergenic 30.0%
CAATAATGATGCATAACGTA+TGG + chr5_1:35313861-35313880 None:intergenic 30.0%
CTTGAAGCCATATGTTATAT+CGG - chr5_1:35313928-35313947 Msa0728950:CDS 30.0%
TAGGGATTGATTAATGGAAT+TGG - chr5_1:35314266-35314285 Msa0728950:CDS 30.0%
!!! GTAGGATTTTTTATTGGCAA+AGG - chr5_1:35314357-35314376 Msa0728950:CDS 30.0%
!!! GATTTTTTATTGGCAAAGGT+GGG - chr5_1:35314361-35314380 Msa0728950:CDS 30.0%
ACTACACTACTAAAATCACA+TGG + chr5_1:35314425-35314444 None:intergenic 30.0%
!! AAGAAGACATATATTGGCTT+TGG - chr5_1:35314573-35314592 Msa0728950:five_prime_UTR 30.0%
AAGAAACATTTGTAGTGGTA+AGG + chr5_1:35312315-35312334 None:intergenic 30.0%
CAATCAATTGAAATGGTGTT+TGG + chr5_1:35312340-35312359 None:intergenic 30.0%
TTTACTACCGTTGAAATACA+TGG - chr5_1:35312534-35312553 Msa0728950:three_prime_UTR 30.0%
!! AAGTACTGATGAAGAATCAA+AGG - chr5_1:35312663-35312682 Msa0728950:three_prime_UTR 30.0%
GAAGAATGTTCTCCAAAATA+TGG - chr5_1:35312724-35312743 Msa0728950:three_prime_UTR 30.0%
TATGGAATAACATCAGTTTG+TGG - chr5_1:35312742-35312761 Msa0728950:three_prime_UTR 30.0%
!! GGTTGATGTGTTTTTACTAT+AGG - chr5_1:35312935-35312954 Msa0728950:three_prime_UTR 30.0%
TTGCAACTATGTGTAAAGAA+AGG - chr5_1:35312958-35312977 Msa0728950:three_prime_UTR 30.0%
AGAAGAAATAGAGAAAGAGA+AGG - chr5_1:35312998-35313017 Msa0728950:three_prime_UTR 30.0%
!!! GGAGAAGAGTTTTATTAGAA+TGG - chr5_1:35313040-35313059 Msa0728950:three_prime_UTR 30.0%
ATCACGATCAATAAGTAGTT+TGG + chr5_1:35313690-35313709 None:intergenic 30.0%
ATTACGATCTAACAACATGT+AGG + chr5_1:35313793-35313812 None:intergenic 30.0%
CAATAATGATGCATAACGTA+TGG + chr5_1:35313861-35313880 None:intergenic 30.0%
CTTGAAGCCATATGTTATAT+CGG - chr5_1:35313928-35313947 Msa0728950:CDS 30.0%
TAGGGATTGATTAATGGAAT+TGG - chr5_1:35314266-35314285 Msa0728950:CDS 30.0%
!!! GTAGGATTTTTTATTGGCAA+AGG - chr5_1:35314357-35314376 Msa0728950:CDS 30.0%
!!! GATTTTTTATTGGCAAAGGT+GGG - chr5_1:35314361-35314380 Msa0728950:CDS 30.0%
ACTACACTACTAAAATCACA+TGG + chr5_1:35314425-35314444 None:intergenic 30.0%
!! AAGAAGACATATATTGGCTT+TGG - chr5_1:35314573-35314592 Msa0728950:five_prime_UTR 30.0%
AACATTTGTAGTGGTAAGGT+GGG + chr5_1:35312311-35312330 None:intergenic 35.0%
AAACATTTGTAGTGGTAAGG+TGG + chr5_1:35312312-35312331 None:intergenic 35.0%
TGGAGAAGAAACATTTGTAG+TGG + chr5_1:35312320-35312339 None:intergenic 35.0%
GAATAACATCAGTTTGTGGA+AGG - chr5_1:35312746-35312765 Msa0728950:three_prime_UTR 35.0%
TTGTGGAAGGAGAAAAGAAA+TGG - chr5_1:35312759-35312778 Msa0728950:three_prime_UTR 35.0%
AAAACTAACCTTATGATCGG+TGG + chr5_1:35313255-35313274 None:intergenic 35.0%
GTTTGGTATCACAATTGTGT+CGG + chr5_1:35313673-35313692 None:intergenic 35.0%
TTAGCACAATATGTGTGGTA+TGG + chr5_1:35313832-35313851 None:intergenic 35.0%
CAACTTCGTCAACAAAATTG+AGG + chr5_1:35314155-35314174 None:intergenic 35.0%
! CTCAATTTTGTTGACGAAGT+TGG - chr5_1:35314153-35314172 Msa0728950:CDS 35.0%
!!! GGATTTTTTATTGGCAAAGG+TGG - chr5_1:35314360-35314379 Msa0728950:CDS 35.0%
AGTAGTGTAGTGTTTGATTG+AGG - chr5_1:35314434-35314453 Msa0728950:CDS 35.0%
TAGTGTTTGATTGAGGAGAA+AGG - chr5_1:35314441-35314460 Msa0728950:CDS 35.0%
TGTATCTTGTGGGAAACAAT+TGG - chr5_1:35314471-35314490 Msa0728950:exon 35.0%
AACATTTGTAGTGGTAAGGT+GGG + chr5_1:35312311-35312330 None:intergenic 35.0%
AAACATTTGTAGTGGTAAGG+TGG + chr5_1:35312312-35312331 None:intergenic 35.0%
TGGAGAAGAAACATTTGTAG+TGG + chr5_1:35312320-35312339 None:intergenic 35.0%
GAATAACATCAGTTTGTGGA+AGG - chr5_1:35312746-35312765 Msa0728950:three_prime_UTR 35.0%
TTGTGGAAGGAGAAAAGAAA+TGG - chr5_1:35312759-35312778 Msa0728950:three_prime_UTR 35.0%
AAAACTAACCTTATGATCGG+TGG + chr5_1:35313255-35313274 None:intergenic 35.0%
GTTTGGTATCACAATTGTGT+CGG + chr5_1:35313673-35313692 None:intergenic 35.0%
TTAGCACAATATGTGTGGTA+TGG + chr5_1:35313832-35313851 None:intergenic 35.0%
CAACTTCGTCAACAAAATTG+AGG + chr5_1:35314155-35314174 None:intergenic 35.0%
! CTCAATTTTGTTGACGAAGT+TGG - chr5_1:35314153-35314172 Msa0728950:CDS 35.0%
!!! GGATTTTTTATTGGCAAAGG+TGG - chr5_1:35314360-35314379 Msa0728950:CDS 35.0%
AGTAGTGTAGTGTTTGATTG+AGG - chr5_1:35314434-35314453 Msa0728950:CDS 35.0%
TAGTGTTTGATTGAGGAGAA+AGG - chr5_1:35314441-35314460 Msa0728950:CDS 35.0%
TGTATCTTGTGGGAAACAAT+TGG - chr5_1:35314471-35314490 Msa0728950:exon 35.0%
ACATTTGTAGTGGTAAGGTG+GGG + chr5_1:35312310-35312329 None:intergenic 40.0%
!! TCAATGGCTGAGATTTGTTG+TGG - chr5_1:35312436-35312455 Msa0728950:three_prime_UTR 40.0%
!! GAGATTTGTTGTGGTGTAGT+CGG - chr5_1:35312445-35312464 Msa0728950:three_prime_UTR 40.0%
ACGGTAGTAAATCCAAACTC+CGG + chr5_1:35312525-35312544 None:intergenic 40.0%
GGATCTGCCATGTATTTCAA+CGG + chr5_1:35312544-35312563 None:intergenic 40.0%
! TCAACTGTGTTTTCGCATTC+TGG + chr5_1:35312631-35312650 None:intergenic 40.0%
!! CATTTCTTCGGTGTTTACGA+CGG - chr5_1:35312829-35312848 Msa0728950:three_prime_UTR 40.0%
TAGAGAAAGAGAAGGTTGAC+TGG - chr5_1:35313006-35313025 Msa0728950:three_prime_UTR 40.0%
TTAATCCGATCCAACTCATC+GGG + chr5_1:35313367-35313386 None:intergenic 40.0%
GTTAATCCGATCCAACTCAT+CGG + chr5_1:35313368-35313387 None:intergenic 40.0%
TTGGATCGGATTAACAAAGC+TGG - chr5_1:35313373-35313392 Msa0728950:three_prime_UTR 40.0%
TGTTACCCTTGATTCATACG+TGG - chr5_1:35313585-35313604 Msa0728950:intron 40.0%
GACAACCACGTATGAATCAA+GGG + chr5_1:35313593-35313612 None:intergenic 40.0%
GATCGTGATTCTAACACATC+CGG - chr5_1:35313701-35313720 Msa0728950:CDS 40.0%
GCCATATGTTATATCGGAAC+CGG - chr5_1:35313934-35313953 Msa0728950:CDS 40.0%
TCCGGTTCCGATATAACATA+TGG + chr5_1:35313938-35313957 None:intergenic 40.0%
ATATGTTATATCGGAACCGG+AGG - chr5_1:35313937-35313956 Msa0728950:intron 40.0%
TTTGTTGACGAAGTTGGCAT+TGG - chr5_1:35314159-35314178 Msa0728950:CDS 40.0%
!! TGCACGTCATAAGTTTTGGT+CGG + chr5_1:35314314-35314333 None:intergenic 40.0%
! ACAGTGCACGTCATAAGTTT+TGG + chr5_1:35314318-35314337 None:intergenic 40.0%
! TTTTTATTGGCAAAGGTGGG+AGG - chr5_1:35314364-35314383 Msa0728950:CDS 40.0%
ACATTTGTAGTGGTAAGGTG+GGG + chr5_1:35312310-35312329 None:intergenic 40.0%
!! TCAATGGCTGAGATTTGTTG+TGG - chr5_1:35312436-35312455 Msa0728950:three_prime_UTR 40.0%
!! GAGATTTGTTGTGGTGTAGT+CGG - chr5_1:35312445-35312464 Msa0728950:three_prime_UTR 40.0%
ACGGTAGTAAATCCAAACTC+CGG + chr5_1:35312525-35312544 None:intergenic 40.0%
GGATCTGCCATGTATTTCAA+CGG + chr5_1:35312544-35312563 None:intergenic 40.0%
! TCAACTGTGTTTTCGCATTC+TGG + chr5_1:35312631-35312650 None:intergenic 40.0%
!! CATTTCTTCGGTGTTTACGA+CGG - chr5_1:35312829-35312848 Msa0728950:three_prime_UTR 40.0%
TAGAGAAAGAGAAGGTTGAC+TGG - chr5_1:35313006-35313025 Msa0728950:three_prime_UTR 40.0%
TTAATCCGATCCAACTCATC+GGG + chr5_1:35313367-35313386 None:intergenic 40.0%
GTTAATCCGATCCAACTCAT+CGG + chr5_1:35313368-35313387 None:intergenic 40.0%
TTGGATCGGATTAACAAAGC+TGG - chr5_1:35313373-35313392 Msa0728950:three_prime_UTR 40.0%
TGTTACCCTTGATTCATACG+TGG - chr5_1:35313585-35313604 Msa0728950:intron 40.0%
GACAACCACGTATGAATCAA+GGG + chr5_1:35313593-35313612 None:intergenic 40.0%
GATCGTGATTCTAACACATC+CGG - chr5_1:35313701-35313720 Msa0728950:CDS 40.0%
GCCATATGTTATATCGGAAC+CGG - chr5_1:35313934-35313953 Msa0728950:CDS 40.0%
TCCGGTTCCGATATAACATA+TGG + chr5_1:35313938-35313957 None:intergenic 40.0%
ATATGTTATATCGGAACCGG+AGG - chr5_1:35313937-35313956 Msa0728950:intron 40.0%
TTTGTTGACGAAGTTGGCAT+TGG - chr5_1:35314159-35314178 Msa0728950:CDS 40.0%
!! TGCACGTCATAAGTTTTGGT+CGG + chr5_1:35314314-35314333 None:intergenic 40.0%
! ACAGTGCACGTCATAAGTTT+TGG + chr5_1:35314318-35314337 None:intergenic 40.0%
! TTTTTATTGGCAAAGGTGGG+AGG - chr5_1:35314364-35314383 Msa0728950:CDS 40.0%
GAAATACATGGCAGATCCAC+CGG - chr5_1:35312546-35312565 Msa0728950:three_prime_UTR 45.0%
! GATCTAGCTTCTGTCGTTTC+CGG + chr5_1:35312579-35312598 None:intergenic 45.0%
! ACTGTGTTTTCGCATTCTGG+CGG + chr5_1:35312628-35312647 None:intergenic 45.0%
ACTCCTCATTGTGATGCTGT+TGG - chr5_1:35313125-35313144 Msa0728950:three_prime_UTR 45.0%
GAACCAACAGCATCACAATG+AGG + chr5_1:35313131-35313150 None:intergenic 45.0%
! GATTTTCTCCGGCGTAACAA+CGG + chr5_1:35313168-35313187 None:intergenic 45.0%
ATGATCGGTGGAAAGAGGAA+TGG + chr5_1:35313243-35313262 None:intergenic 45.0%
TCCTCTTTCCACCGATCATA+AGG - chr5_1:35313244-35313263 Msa0728950:three_prime_UTR 45.0%
ACCTTATGATCGGTGGAAAG+AGG + chr5_1:35313248-35313267 None:intergenic 45.0%
GATCGGATTAACAAAGCTGG+AGG - chr5_1:35313376-35313395 Msa0728950:three_prime_UTR 45.0%
TGGAGGACGTGTGATCTATT+GGG - chr5_1:35313393-35313412 Msa0728950:three_prime_UTR 45.0%
TTGGCCATGTCAAGAGCTAT+TGG - chr5_1:35313439-35313458 Msa0728950:exon 45.0%
CTCACCAATAGCTCTTGACA+TGG + chr5_1:35313446-35313465 None:intergenic 45.0%
GGACAACCACGTATGAATCA+AGG + chr5_1:35313594-35313613 None:intergenic 45.0%
CAATATGTGTGGTATGGCGA+TGG + chr5_1:35313826-35313845 None:intergenic 45.0%
GGAACCGGAGGTAACTATAA+CGG - chr5_1:35313949-35313968 Msa0728950:intron 45.0%
CTCTCCGTTATAGTTACCTC+CGG + chr5_1:35313956-35313975 None:intergenic 45.0%
TGTCTGATACTTGCGAGTGA+TGG - chr5_1:35313992-35314011 Msa0728950:intron 45.0%
TACTTGCGAGTGATGGCTTA+TGG - chr5_1:35313999-35314018 Msa0728950:intron 45.0%
ACTTGCGAGTGATGGCTTAT+GGG - chr5_1:35314000-35314019 Msa0728950:intron 45.0%
TAGTTCGGACAATGTTAGCG+TGG - chr5_1:35314189-35314208 Msa0728950:CDS 45.0%
TCTGGACACCTATGATTCGT+AGG - chr5_1:35314339-35314358 Msa0728950:CDS 45.0%
AAAGGTGGGAGGAAAATGGT+GGG - chr5_1:35314375-35314394 Msa0728950:CDS 45.0%
GAAATACATGGCAGATCCAC+CGG - chr5_1:35312546-35312565 Msa0728950:three_prime_UTR 45.0%
! GATCTAGCTTCTGTCGTTTC+CGG + chr5_1:35312579-35312598 None:intergenic 45.0%
! ACTGTGTTTTCGCATTCTGG+CGG + chr5_1:35312628-35312647 None:intergenic 45.0%
ACTCCTCATTGTGATGCTGT+TGG - chr5_1:35313125-35313144 Msa0728950:three_prime_UTR 45.0%
GAACCAACAGCATCACAATG+AGG + chr5_1:35313131-35313150 None:intergenic 45.0%
! GATTTTCTCCGGCGTAACAA+CGG + chr5_1:35313168-35313187 None:intergenic 45.0%
ATGATCGGTGGAAAGAGGAA+TGG + chr5_1:35313243-35313262 None:intergenic 45.0%
TCCTCTTTCCACCGATCATA+AGG - chr5_1:35313244-35313263 Msa0728950:three_prime_UTR 45.0%
ACCTTATGATCGGTGGAAAG+AGG + chr5_1:35313248-35313267 None:intergenic 45.0%
GATCGGATTAACAAAGCTGG+AGG - chr5_1:35313376-35313395 Msa0728950:three_prime_UTR 45.0%
TGGAGGACGTGTGATCTATT+GGG - chr5_1:35313393-35313412 Msa0728950:three_prime_UTR 45.0%
TTGGCCATGTCAAGAGCTAT+TGG - chr5_1:35313439-35313458 Msa0728950:exon 45.0%
CTCACCAATAGCTCTTGACA+TGG + chr5_1:35313446-35313465 None:intergenic 45.0%
GGACAACCACGTATGAATCA+AGG + chr5_1:35313594-35313613 None:intergenic 45.0%
CAATATGTGTGGTATGGCGA+TGG + chr5_1:35313826-35313845 None:intergenic 45.0%
GGAACCGGAGGTAACTATAA+CGG - chr5_1:35313949-35313968 Msa0728950:intron 45.0%
CTCTCCGTTATAGTTACCTC+CGG + chr5_1:35313956-35313975 None:intergenic 45.0%
TGTCTGATACTTGCGAGTGA+TGG - chr5_1:35313992-35314011 Msa0728950:intron 45.0%
TACTTGCGAGTGATGGCTTA+TGG - chr5_1:35313999-35314018 Msa0728950:intron 45.0%
ACTTGCGAGTGATGGCTTAT+GGG - chr5_1:35314000-35314019 Msa0728950:intron 45.0%
TAGTTCGGACAATGTTAGCG+TGG - chr5_1:35314189-35314208 Msa0728950:CDS 45.0%
TCTGGACACCTATGATTCGT+AGG - chr5_1:35314339-35314358 Msa0728950:CDS 45.0%
AAAGGTGGGAGGAAAATGGT+GGG - chr5_1:35314375-35314394 Msa0728950:CDS 45.0%
TAAATCCAAACTCCGGCGAC+CGG + chr5_1:35312518-35312537 None:intergenic 50.0%
! TGTCGTTTCCGGCTATTCTC+CGG + chr5_1:35312568-35312587 None:intergenic 50.0%
! GGTGGTGGTGATGAAACAGA+TGG + chr5_1:35312601-35312620 None:intergenic 50.0%
!! TTCGGTGTTTACGACGGTCA+TGG - chr5_1:35312835-35312854 Msa0728950:three_prime_UTR 50.0%
GGTTGACTGGAAGTCAACGA+TGG - chr5_1:35313019-35313038 Msa0728950:three_prime_UTR 50.0%
TGTTGTTGCCGTTGTTACGC+CGG - chr5_1:35313157-35313176 Msa0728950:three_prime_UTR 50.0%
TCCGGCTGCACAAACGAATA+CGG + chr5_1:35313340-35313359 None:intergenic 50.0%
! ATCGACCCGATGAGTTGGAT+CGG - chr5_1:35313359-35313378 Msa0728950:three_prime_UTR 50.0%
CTGGAGGACGTGTGATCTAT+TGG - chr5_1:35313392-35313411 Msa0728950:three_prime_UTR 50.0%
GGACGTGTGATCTATTGGGA+TGG - chr5_1:35313397-35313416 Msa0728950:three_prime_UTR 50.0%
!! TGCAAGAGTGCTTGGAGTGT+TGG - chr5_1:35313420-35313439 Msa0728950:three_prime_UTR 50.0%
! CGGAGGTAACTATAACGGAG+AGG - chr5_1:35313954-35313973 Msa0728950:intron 50.0%
! TATAACGGAGAGGAGTGACG+AGG - chr5_1:35313964-35313983 Msa0728950:intron 50.0%
TGCAAAACGACACGGCATGT+AGG - chr5_1:35314029-35314048 Msa0728950:intron 50.0%
GCAAAACGACACGGCATGTA+GGG - chr5_1:35314030-35314049 Msa0728950:intron 50.0%
! GAAGTGAAGTGGCGGGAAAA+GGG - chr5_1:35314107-35314126 Msa0728950:CDS 50.0%
AGGGTCAGATAAGGCGTGTT+CGG - chr5_1:35314126-35314145 Msa0728950:CDS 50.0%
!! GGCATTGGCGAGGAATAGTT+CGG - chr5_1:35314174-35314193 Msa0728950:CDS 50.0%
TTCGGACAATGTTAGCGTGG+TGG - chr5_1:35314192-35314211 Msa0728950:CDS 50.0%
!! GCGTGGTGGTTGTTGATTTG+AGG - chr5_1:35314206-35314225 Msa0728950:CDS 50.0%
CTTATGACGTGCACTGTGTC+TGG - chr5_1:35314321-35314340 Msa0728950:CDS 50.0%
TGGCAAAGGTGGGAGGAAAA+TGG - chr5_1:35314371-35314390 Msa0728950:CDS 50.0%
CAAAGGTGGGAGGAAAATGG+TGG - chr5_1:35314374-35314393 Msa0728950:CDS 50.0%
AAGGTGGGAGGAAAATGGTG+GGG - chr5_1:35314376-35314395 Msa0728950:CDS 50.0%
TAAATCCAAACTCCGGCGAC+CGG + chr5_1:35312518-35312537 None:intergenic 50.0%
! TGTCGTTTCCGGCTATTCTC+CGG + chr5_1:35312568-35312587 None:intergenic 50.0%
! GGTGGTGGTGATGAAACAGA+TGG + chr5_1:35312601-35312620 None:intergenic 50.0%
!! TTCGGTGTTTACGACGGTCA+TGG - chr5_1:35312835-35312854 Msa0728950:three_prime_UTR 50.0%
GGTTGACTGGAAGTCAACGA+TGG - chr5_1:35313019-35313038 Msa0728950:three_prime_UTR 50.0%
TGTTGTTGCCGTTGTTACGC+CGG - chr5_1:35313157-35313176 Msa0728950:three_prime_UTR 50.0%
TCCGGCTGCACAAACGAATA+CGG + chr5_1:35313340-35313359 None:intergenic 50.0%
! ATCGACCCGATGAGTTGGAT+CGG - chr5_1:35313359-35313378 Msa0728950:three_prime_UTR 50.0%
CTGGAGGACGTGTGATCTAT+TGG - chr5_1:35313392-35313411 Msa0728950:three_prime_UTR 50.0%
GGACGTGTGATCTATTGGGA+TGG - chr5_1:35313397-35313416 Msa0728950:three_prime_UTR 50.0%
!! TGCAAGAGTGCTTGGAGTGT+TGG - chr5_1:35313420-35313439 Msa0728950:three_prime_UTR 50.0%
! CGGAGGTAACTATAACGGAG+AGG - chr5_1:35313954-35313973 Msa0728950:intron 50.0%
! TATAACGGAGAGGAGTGACG+AGG - chr5_1:35313964-35313983 Msa0728950:intron 50.0%
TGCAAAACGACACGGCATGT+AGG - chr5_1:35314029-35314048 Msa0728950:intron 50.0%
GCAAAACGACACGGCATGTA+GGG - chr5_1:35314030-35314049 Msa0728950:intron 50.0%
! GAAGTGAAGTGGCGGGAAAA+GGG - chr5_1:35314107-35314126 Msa0728950:CDS 50.0%
AGGGTCAGATAAGGCGTGTT+CGG - chr5_1:35314126-35314145 Msa0728950:CDS 50.0%
!! GGCATTGGCGAGGAATAGTT+CGG - chr5_1:35314174-35314193 Msa0728950:CDS 50.0%
TTCGGACAATGTTAGCGTGG+TGG - chr5_1:35314192-35314211 Msa0728950:CDS 50.0%
!! GCGTGGTGGTTGTTGATTTG+AGG - chr5_1:35314206-35314225 Msa0728950:CDS 50.0%
CTTATGACGTGCACTGTGTC+TGG - chr5_1:35314321-35314340 Msa0728950:CDS 50.0%
TGGCAAAGGTGGGAGGAAAA+TGG - chr5_1:35314371-35314390 Msa0728950:CDS 50.0%
CAAAGGTGGGAGGAAAATGG+TGG - chr5_1:35314374-35314393 Msa0728950:CDS 50.0%
AAGGTGGGAGGAAAATGGTG+GGG - chr5_1:35314376-35314395 Msa0728950:CDS 50.0%
GGTCGTGAGCTTGGTTCAAC+TGG + chr5_1:35312493-35312512 None:intergenic 55.0%
GAACCAAGCTCACGACCTTC+CGG - chr5_1:35312496-35312515 Msa0728950:three_prime_UTR 55.0%
CAGATCCACCGGAGAATAGC+CGG - chr5_1:35312557-35312576 Msa0728950:three_prime_UTR 55.0%
! TTTTCGCATTCTGGCGGTGG+CGG + chr5_1:35312622-35312641 None:intergenic 55.0%
! GTGTTTTCGCATTCTGGCGG+TGG + chr5_1:35312625-35312644 None:intergenic 55.0%
ATTCGCGAGCCGTTCTTTGC+CGG - chr5_1:35313207-35313226 Msa0728950:three_prime_UTR 55.0%
AACGCCGTTCCGGCAAAGAA+CGG + chr5_1:35313219-35313238 None:intergenic 55.0%
CCGGCTGCACAAACGAATAC+GGG + chr5_1:35313339-35313358 None:intergenic 55.0%
CCCGTATTCGTTTGTGCAGC+CGG - chr5_1:35313336-35313355 Msa0728950:three_prime_UTR 55.0%
TCCAACTCATCGGGTCGATC+CGG + chr5_1:35313358-35313377 None:intergenic 55.0%
!! TGGGATGGTGCAAGAGTGCT+TGG - chr5_1:35313412-35313431 Msa0728950:three_prime_UTR 55.0%
GAGTGATGGCTTATGGGACG+TGG - chr5_1:35314006-35314025 Msa0728950:intron 55.0%
GGACGTGGTGCAAAACGACA+CGG - chr5_1:35314021-35314040 Msa0728950:intron 55.0%
AAACGACACGGCATGTAGGG+TGG - chr5_1:35314033-35314052 Msa0728950:intron 55.0%
GGTGGTGCAGATGTGTCTCA+AGG - chr5_1:35314051-35314070 Msa0728950:CDS 55.0%
GGTGCAGATGTGTCTCAAGG+CGG - chr5_1:35314054-35314073 Msa0728950:CDS 55.0%
AGATGTGTCTCAAGGCGGAG+AGG - chr5_1:35314059-35314078 Msa0728950:CDS 55.0%
TTTCCCGCCACTTCACTTCC+CGG + chr5_1:35314106-35314125 None:intergenic 55.0%
! GGAAGTGAAGTGGCGGGAAA+AGG - chr5_1:35314106-35314125 Msa0728950:CDS 55.0%
GGCGGGAAAAGGGTCAGATA+AGG - chr5_1:35314117-35314136 Msa0728950:CDS 55.0%
!! TGACGAAGTTGGCATTGGCG+AGG - chr5_1:35314164-35314183 Msa0728950:CDS 55.0%
! GGTAAGGTGGGGTCCACTTT+TGG + chr5_1:35312299-35312318 None:intergenic 55.0%
GGTCGTGAGCTTGGTTCAAC+TGG + chr5_1:35312493-35312512 None:intergenic 55.0%
GAACCAAGCTCACGACCTTC+CGG - chr5_1:35312496-35312515 Msa0728950:three_prime_UTR 55.0%
CAGATCCACCGGAGAATAGC+CGG - chr5_1:35312557-35312576 Msa0728950:three_prime_UTR 55.0%
! TTTTCGCATTCTGGCGGTGG+CGG + chr5_1:35312622-35312641 None:intergenic 55.0%
! GTGTTTTCGCATTCTGGCGG+TGG + chr5_1:35312625-35312644 None:intergenic 55.0%
ATTCGCGAGCCGTTCTTTGC+CGG - chr5_1:35313207-35313226 Msa0728950:three_prime_UTR 55.0%
AACGCCGTTCCGGCAAAGAA+CGG + chr5_1:35313219-35313238 None:intergenic 55.0%
CCGGCTGCACAAACGAATAC+GGG + chr5_1:35313339-35313358 None:intergenic 55.0%
CCCGTATTCGTTTGTGCAGC+CGG - chr5_1:35313336-35313355 Msa0728950:three_prime_UTR 55.0%
TCCAACTCATCGGGTCGATC+CGG + chr5_1:35313358-35313377 None:intergenic 55.0%
!! TGGGATGGTGCAAGAGTGCT+TGG - chr5_1:35313412-35313431 Msa0728950:three_prime_UTR 55.0%
GAGTGATGGCTTATGGGACG+TGG - chr5_1:35314006-35314025 Msa0728950:intron 55.0%
GGACGTGGTGCAAAACGACA+CGG - chr5_1:35314021-35314040 Msa0728950:intron 55.0%
AAACGACACGGCATGTAGGG+TGG - chr5_1:35314033-35314052 Msa0728950:intron 55.0%
GGTGGTGCAGATGTGTCTCA+AGG - chr5_1:35314051-35314070 Msa0728950:CDS 55.0%
GGTGCAGATGTGTCTCAAGG+CGG - chr5_1:35314054-35314073 Msa0728950:CDS 55.0%
AGATGTGTCTCAAGGCGGAG+AGG - chr5_1:35314059-35314078 Msa0728950:CDS 55.0%
TTTCCCGCCACTTCACTTCC+CGG + chr5_1:35314106-35314125 None:intergenic 55.0%
! GGAAGTGAAGTGGCGGGAAA+AGG - chr5_1:35314106-35314125 Msa0728950:CDS 55.0%
GGCGGGAAAAGGGTCAGATA+AGG - chr5_1:35314117-35314136 Msa0728950:CDS 55.0%
!! TGACGAAGTTGGCATTGGCG+AGG - chr5_1:35314164-35314183 Msa0728950:CDS 55.0%
CGTTTCCGGCTATTCTCCGG+TGG + chr5_1:35312565-35312584 None:intergenic 60.0%
CGAGCCGTTCTTTGCCGGAA+CGG - chr5_1:35313212-35313231 Msa0728950:three_prime_UTR 60.0%
GAGGAATGGCAACGCCGTTC+CGG + chr5_1:35313229-35313248 None:intergenic 60.0%
GTGTCTCAAGGCGGAGAGGA+CGG - chr5_1:35314063-35314082 Msa0728950:CDS 60.0%
ACTTCACTTCCCGGAGACCC+CGG + chr5_1:35314097-35314116 None:intergenic 60.0%
GTCTCCGGGAAGTGAAGTGG+CGG - chr5_1:35314099-35314118 Msa0728950:CDS 60.0%
TCTCCGGGAAGTGAAGTGGC+GGG - chr5_1:35314100-35314119 Msa0728950:CDS 60.0%
CGTTTCCGGCTATTCTCCGG+TGG + chr5_1:35312565-35312584 None:intergenic 60.0%
CGAGCCGTTCTTTGCCGGAA+CGG - chr5_1:35313212-35313231 Msa0728950:three_prime_UTR 60.0%
GAGGAATGGCAACGCCGTTC+CGG + chr5_1:35313229-35313248 None:intergenic 60.0%
GTGTCTCAAGGCGGAGAGGA+CGG - chr5_1:35314063-35314082 Msa0728950:CDS 60.0%
ACTTCACTTCCCGGAGACCC+CGG + chr5_1:35314097-35314116 None:intergenic 60.0%
GTCTCCGGGAAGTGAAGTGG+CGG - chr5_1:35314099-35314118 Msa0728950:CDS 60.0%
TCTCCGGGAAGTGAAGTGGC+GGG - chr5_1:35314100-35314119 Msa0728950:CDS 60.0%
CGACCGGAAGGTCGTGAGCT+TGG + chr5_1:35312502-35312521 None:intergenic 65.0%
ACCTTCCGGTCGCCGGAGTT+TGG - chr5_1:35312510-35312529 Msa0728950:three_prime_UTR 65.0%
TCCAAACTCCGGCGACCGGA+AGG + chr5_1:35312514-35312533 None:intergenic 65.0%
GCCGGATCGACCCGATGAGT+TGG - chr5_1:35313354-35313373 Msa0728950:three_prime_UTR 65.0%
GGGGTCTCCGGGAAGTGAAG+TGG - chr5_1:35314096-35314115 Msa0728950:CDS 65.0%
CGACCGGAAGGTCGTGAGCT+TGG + chr5_1:35312502-35312521 None:intergenic 65.0%
ACCTTCCGGTCGCCGGAGTT+TGG - chr5_1:35312510-35312529 Msa0728950:three_prime_UTR 65.0%
TCCAAACTCCGGCGACCGGA+AGG + chr5_1:35312514-35312533 None:intergenic 65.0%
GCCGGATCGACCCGATGAGT+TGG - chr5_1:35313354-35313373 Msa0728950:three_prime_UTR 65.0%
GGGGTCTCCGGGAAGTGAAG+TGG - chr5_1:35314096-35314115 Msa0728950:CDS 65.0%
GCTCACGACCTTCCGGTCGC+CGG - chr5_1:35312503-35312522 Msa0728950:three_prime_UTR 70.0%
! CATTCTGGCGGTGGCGGTGG+TGG + chr5_1:35312616-35312635 None:intergenic 70.0%
! TCGCATTCTGGCGGTGGCGG+TGG + chr5_1:35312619-35312638 None:intergenic 70.0%
GGAGAGGACGGTGACTCCGC+CGG - chr5_1:35314075-35314094 Msa0728950:CDS 70.0%
GAGAGGACGGTGACTCCGCC+GGG - chr5_1:35314076-35314095 Msa0728950:CDS 70.0%
AGAGGACGGTGACTCCGCCG+GGG - chr5_1:35314077-35314096 Msa0728950:CDS 70.0%
TCACTTCCCGGAGACCCCGG+CGG + chr5_1:35314094-35314113 None:intergenic 70.0%
GCTCACGACCTTCCGGTCGC+CGG - chr5_1:35312503-35312522 Msa0728950:three_prime_UTR 70.0%
! CATTCTGGCGGTGGCGGTGG+TGG + chr5_1:35312616-35312635 None:intergenic 70.0%
! TCGCATTCTGGCGGTGGCGG+TGG + chr5_1:35312619-35312638 None:intergenic 70.0%
GGAGAGGACGGTGACTCCGC+CGG - chr5_1:35314075-35314094 Msa0728950:CDS 70.0%
GAGAGGACGGTGACTCCGCC+GGG - chr5_1:35314076-35314095 Msa0728950:CDS 70.0%
AGAGGACGGTGACTCCGCCG+GGG - chr5_1:35314077-35314096 Msa0728950:CDS 70.0%
TCACTTCCCGGAGACCCCGG+CGG + chr5_1:35314094-35314113 None:intergenic 70.0%
GGTGACTCCGCCGGGGTCTC+CGG - chr5_1:35314084-35314103 Msa0728950:CDS 75.0%
GTGACTCCGCCGGGGTCTCC+GGG - chr5_1:35314085-35314104 Msa0728950:CDS 75.0%
GGTGACTCCGCCGGGGTCTC+CGG - chr5_1:35314084-35314103 Msa0728950:CDS 75.0%
GTGACTCCGCCGGGGTCTCC+GGG - chr5_1:35314085-35314104 Msa0728950:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 35312299 35314612 35312299 ID=Msa0728950;Name=Msa0728950
chr5_1 mRNA 35312299 35314612 35312299 ID=Msa0728950-mRNA-1;Parent=Msa0728950;Name=Msa0728950-mRNA-1;_AED=0.05;_eAED=0.05;_QI=140|1|1|1|1|1|3|1144|283
chr5_1 exon 35312299 35313556 35312299 ID=Msa0728950-mRNA-1:exon:10931;Parent=Msa0728950-mRNA-1
chr5_1 exon 35313646 35313954 35313646 ID=Msa0728950-mRNA-1:exon:10930;Parent=Msa0728950-mRNA-1
chr5_1 exon 35314044 35314612 35314044 ID=Msa0728950-mRNA-1:exon:10929;Parent=Msa0728950-mRNA-1
chr5_1 five_prime_UTR 35314473 35314612 35314473 ID=Msa0728950-mRNA-1:five_prime_utr;Parent=Msa0728950-mRNA-1
chr5_1 CDS 35314044 35314472 35314044 ID=Msa0728950-mRNA-1:cds;Parent=Msa0728950-mRNA-1
chr5_1 CDS 35313646 35313954 35313646 ID=Msa0728950-mRNA-1:cds;Parent=Msa0728950-mRNA-1
chr5_1 CDS 35313443 35313556 35313443 ID=Msa0728950-mRNA-1:cds;Parent=Msa0728950-mRNA-1
chr5_1 three_prime_UTR 35312299 35313442 35312299 ID=Msa0728950-mRNA-1:three_prime_utr;Parent=Msa0728950-mRNA-1
Gene Sequence

>Msa0728950

ATGGCTGAGATTTGTTGTGGTGTAGTCGGAGAAGAAGAAACTCTTACTCTACCAGTTGAACCAAGCTCACGACCTTCCGGTCGCCGGAGTTTGGATTTACTACCGTTGAAATACATGGCAGATCCACCGGAGAATAGCCGGAAACGACAGAAGCTAGATCCATCTGTTTCATCACCACCACCGCCACCGCCAGAATGCGAAAACACAGTTGATAGCTGTGAATCAAGTACTGATGAAGAATCAAAGGAAAACGAAGTTGTTTTGAAAAACAAAGTTGTTGTTGTTGAAGAATGTTCTCCAAAATATGGAATAACATCAGTTTGTGGAAGGAGAAAAGAAATGGAAGACGCTGTTTCTGTTCATTCATCGTTTTGTAATGAAAAACAAGATCATTTCTTCGGTGTTTACGACGGTCATGGTTGTTCACATGTTGCAACTATGTGTAAAGAAAGGTTGCATGAAATTGTTGAAGAAGAAATAGAGAAAGAGAAGGTTGACTGGAAGTCAACGATGGAGAAGAGTTTTATTAGAATGGATGAAGAGGTGTTGAATTCTAGCAAGACGAAAAAGAGTTTCAGTTGTAAGTGTGAGCTTCAAACTCCTCATTGTGATGCTGTTGGTTCTACTGCTGTTGTTGCCGTTGTTACGCCGGAGAAAATCATTGTTTCTAATTGCGGTGATTCGCGAGCCGTTCTTTGCCGGAACGGCGTTGCCATTCCTCTTTCCACCGATCATAAGCCGGATCGACCCGATGAGTTGGATCGGATTAACAAAGCTGGAGGACGTGTGATCTATTGGGATGGTGCAAGAGTGCTTGGAGTGTTGGCCATGTCAAGAGCTATTGGTGAGTGA
Protein sequence

>Msa0728950

MAEICCGVVGEEETLTLPVEPSSRPSGRRSLDLLPLKYMADPPENSRKRQKLDPSVSSPPPPPPECENTVDSCESSTDEESKENEVVLKNKVVVVEECSPKYGITSVCGRRKEMEDAVSVHSSFCNEKQDHFFGVYDGHGCSHVATMCKERLHEIVEEEIEKEKVDWKSTMEKSFIRMDEEVLNSSKTKKSFSCKCELQTPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAIPLSTDHKPDRPDELDRINKAGGRVIYWDGARVLGVLAMSRAIGE*