AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0785570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0785570 MtrunA17_Chr5g0435721 94.656 393 19 1 1 393 92 482 0.0 669
Msa0785570 MtrunA17_Chr3g0112291 66.667 402 103 8 1 392 1 381 0.0 510
Msa0785570 MtrunA17_Chr1g0158781 53.608 291 107 6 102 387 113 380 9.07e-84 260
Msa0785570 MtrunA17_Chr4g0070871 45.312 320 123 6 100 387 205 504 9.38e-82 259
Msa0785570 MtrunA17_Chr3g0135961 45.210 334 129 6 97 391 226 544 2.13e-81 259
Msa0785570 MtrunA17_Chr1g0150781 45.231 325 129 7 97 387 235 544 3.08e-79 254
Msa0785570 MtrunA17_Chr8g0389921 41.783 359 155 6 61 392 109 440 1.15e-77 246
Msa0785570 MtrunA17_Chr2g0299981 42.553 329 148 7 99 392 218 540 1.55e-77 249
Msa0785570 MtrunA17_Chr5g0396731 49.597 248 110 4 96 337 67 305 9.60e-75 236
Msa0785570 MtrunA17_Chr3g0126511 37.457 291 141 6 103 392 96 346 1.19e-47 166
Msa0785570 MtrunA17_Chr1g0212961 37.809 283 133 4 102 384 96 335 6.39e-47 163
Msa0785570 MtrunA17_Chr1g0150451 37.456 283 138 4 102 384 78 321 1.80e-45 159
Msa0785570 MtrunA17_Chr3g0136711 36.678 289 144 4 102 390 35 284 2.90e-45 158
Msa0785570 MtrunA17_Chr3g0105371 33.910 289 151 7 103 387 87 339 3.18e-42 151
Msa0785570 MtrunA17_Chr3g0105351 33.218 289 153 7 103 387 63 315 2.87e-40 145
Msa0785570 MtrunA17_Chr5g0430481 33.446 296 159 6 94 387 116 375 4.82e-39 143
Msa0785570 MtrunA17_Chr4g0001761 35.417 288 137 8 96 341 18 298 8.30e-39 142
Msa0785570 MtrunA17_Chr3g0136811 34.409 279 128 10 101 333 23 292 9.69e-37 137
Msa0785570 MtrunA17_Chr1g0150071 32.986 288 144 8 96 341 18 298 5.03e-36 135
Msa0785570 MtrunA17_Chr8g0360351 34.495 287 142 8 102 384 35 279 1.04e-32 124
Msa0785570 MtrunA17_Chr1g0171571 31.834 289 163 8 102 387 388 645 2.63e-32 128
Msa0785570 MtrunA17_Chr5g0407161 31.624 351 175 15 62 389 40 348 1.45e-31 123
Msa0785570 MtrunA17_Chr4g0050381 30.928 291 155 8 101 387 29 277 9.90e-30 116
Msa0785570 MtrunA17_Chr3g0138281 32.313 294 141 11 109 384 90 343 1.32e-29 117
Msa0785570 MtrunA17_Chr2g0317021 33.448 290 147 9 102 387 86 333 3.40e-29 115
Msa0785570 MtrunA17_Chr5g0426141 32.432 296 148 9 99 387 32 282 4.59e-28 111
Msa0785570 MtrunA17_Chr3g0115851 32.313 294 151 9 99 387 32 282 7.56e-27 108
Msa0785570 MtrunA17_Chr4g0065141 27.922 308 154 9 88 384 98 348 7.72e-27 110
Msa0785570 MtrunA17_Chr2g0279151 31.633 294 155 9 98 387 30 281 9.93e-27 107
Msa0785570 MtrunA17_Chr2g0293811 29.588 267 137 9 132 384 100 329 8.08e-26 107
Msa0785570 MtrunA17_Chr4g0051661 32.468 231 133 5 114 341 165 375 2.19e-25 106
Msa0785570 MtrunA17_Chr4g0004971 32.231 242 137 7 109 323 55 296 1.60e-24 103
Msa0785570 MtrunA17_Chr1g0194191 28.339 307 163 10 99 384 77 347 5.75e-24 102
Msa0785570 MtrunA17_Chr4g0067711 27.835 291 156 11 79 330 37 312 6.36e-24 101
Msa0785570 MtrunA17_Chr2g0295401 28.621 290 155 11 79 330 38 313 8.45e-24 101
Msa0785570 MtrunA17_Chr3g0144111 31.660 259 111 8 132 384 27 225 4.99e-23 97.4
Msa0785570 MtrunA17_Chr7g0272061 29.252 294 157 10 79 330 37 321 6.00e-23 99.4
Msa0785570 MtrunA17_Chr1g0151781 31.660 259 128 9 109 332 46 290 9.23e-23 98.2
Msa0785570 MtrunA17_Chr1g0192421 29.845 258 132 7 109 330 66 310 3.04e-22 96.7
Msa0785570 MtrunA17_Chr6g0483411 31.250 256 137 8 109 341 52 291 3.67e-22 96.3
Msa0785570 MtrunA17_Chr7g0249421 32.721 272 133 10 109 330 73 344 1.01e-21 96.7
Msa0785570 MtrunA17_Chr7g0243571 29.740 269 129 9 109 330 69 324 2.84e-21 95.1
Msa0785570 MtrunA17_Chr2g0324061 32.222 270 121 11 109 330 68 323 7.80e-21 94.0
Msa0785570 MtrunA17_Chr3g0127091 24.691 324 172 8 101 386 60 349 1.60e-20 92.4
Msa0785570 MtrunA17_Chr7g0221691 28.571 273 135 8 109 330 106 369 1.03e-19 90.5
Msa0785570 MtrunA17_Chr1g0185141 28.339 307 140 11 139 386 153 438 3.40e-19 90.1
Msa0785570 MtrunA17_Chr4g0022171 29.889 271 127 10 109 330 74 330 4.69e-19 88.6
Msa0785570 MtrunA17_Chr1g0213351 29.412 238 119 9 132 333 80 304 5.38e-19 87.8
Msa0785570 MtrunA17_Chr6g0486661 27.969 261 125 9 112 330 104 343 1.89e-18 87.8
Msa0785570 MtrunA17_Chr7g0263281 27.848 237 124 7 129 330 68 292 5.77e-18 84.7
Msa0785570 MtrunA17_Chr7g0250061 29.289 239 114 8 132 331 76 298 7.86e-18 84.3
Msa0785570 MtrunA17_Chr1g0211251 28.452 239 116 8 132 331 81 303 1.25e-17 84.0
Msa0785570 MtrunA17_Chr4g0066371 25.513 341 179 14 87 387 36 341 4.10e-17 82.4
Msa0785570 MtrunA17_Chr8g0342431 28.028 289 137 10 104 330 55 334 7.59e-17 81.6
Msa0785570 MtrunA17_Chr3g0089711 27.386 241 116 10 132 331 68 290 8.29e-17 81.3
Msa0785570 MtrunA17_Chr1g0207571 26.531 294 160 10 132 386 61 337 1.25e-16 80.9
Msa0785570 MtrunA17_Chr3g0089721 26.971 241 117 10 132 331 68 290 3.11e-16 79.7
Msa0785570 MtrunA17_Chr8g0371321 28.099 242 113 7 132 331 79 301 7.37e-16 78.6
Msa0785570 MtrunA17_Chr1g0181901 26.923 234 130 6 129 330 73 297 1.10e-15 78.2
Msa0785570 MtrunA17_Chr7g0256751 27.165 254 137 10 112 331 52 291 6.71e-15 75.9
Msa0785570 MtrunA17_Chr7g0271971 27.706 231 122 8 133 340 69 277 2.56e-14 74.3
Msa0785570 MtrunA17_Chr2g0286951 26.210 248 133 8 112 325 67 298 8.22e-14 72.4
Msa0785570 MtrunA17_Chr2g0294291 25.172 290 174 10 132 389 75 353 9.08e-14 72.0
Msa0785570 MtrunA17_Chr1g0209451 26.991 226 130 7 133 340 69 277 1.63e-13 71.6
Msa0785570 MtrunA17_Chr7g0256771 27.083 240 118 9 132 331 70 292 2.20e-13 70.5
Msa0785570 MtrunA17_Chr1g0192471 26.840 231 124 8 133 340 69 277 2.53e-13 71.2
Msa0785570 MtrunA17_Chr7g0225501 30.542 203 121 8 133 324 87 280 4.63e-13 70.5
Msa0785570 MtrunA17_Chr1g0175381 26.271 236 124 8 132 331 79 300 1.40e-12 68.6
Msa0785570 MtrunA17_Chr7g0238501 24.262 305 184 9 120 386 251 546 1.96e-12 68.6
Msa0785570 MtrunA17_Chr3g0089691 30.337 178 75 7 194 331 36 204 2.28e-12 67.4
Msa0785570 MtrunA17_Chr2g0295991 27.434 226 121 7 203 391 262 481 3.30e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0785570 AT1G07430.1 60.734 354 107 5 71 393 88 440 2.47e-143 415
Msa0785570 AT2G29380.1 67.458 295 84 4 99 388 75 362 6.16e-139 400
Msa0785570 AT3G11410.1 59.427 419 121 10 1 393 1 396 1.53e-138 401
Msa0785570 AT5G59220.1 61.782 348 102 7 67 389 71 412 6.13e-120 354
Msa0785570 AT5G59220.2 61.638 232 69 6 67 284 71 296 2.55e-88 270
Msa0785570 AT5G51760.2 48.265 317 124 6 100 387 77 382 2.31e-87 270
Msa0785570 AT4G26080.1 47.284 313 124 4 100 387 127 423 2.43e-87 271
Msa0785570 AT5G51760.1 48.265 317 124 6 100 387 107 412 6.39e-87 270
Msa0785570 AT5G57050.2 46.541 318 128 4 98 387 69 372 1.19e-86 268
Msa0785570 AT5G57050.1 46.855 318 127 4 98 387 109 412 1.91e-86 269
Msa0785570 AT1G72770.4 44.940 336 150 4 87 391 175 506 5.59e-86 270
Msa0785570 AT1G72770.1 44.940 336 150 4 87 391 175 506 5.59e-86 270
Msa0785570 AT1G72770.3 44.940 336 150 4 87 391 175 506 5.59e-86 270
Msa0785570 AT1G17550.1 44.606 343 153 6 82 391 168 506 1.70e-82 261
Msa0785570 AT1G17550.2 44.606 343 153 6 82 391 168 506 1.70e-82 261
Msa0785570 AT5G57050.3 48.148 216 72 4 98 288 109 309 4.20e-56 187
Msa0785570 AT1G72770.2 43.612 227 99 2 87 284 175 401 9.12e-50 173
Msa0785570 AT1G72770.5 43.612 227 99 2 87 284 175 401 9.12e-50 173
Msa0785570 AT1G67820.2 40.586 239 124 2 102 339 85 306 3.76e-48 169
Msa0785570 AT1G67820.1 40.586 239 124 2 102 339 121 342 8.38e-48 169
Msa0785570 AT5G24940.1 36.749 283 140 4 102 384 34 277 1.89e-46 165
Msa0785570 AT5G10740.1 36.042 283 142 4 102 384 34 277 1.01e-45 161
Msa0785570 AT5G10740.2 36.042 283 142 4 102 384 34 277 1.01e-45 161
Msa0785570 AT1G43900.1 37.456 283 137 5 102 384 124 366 5.66e-45 159
Msa0785570 AT5G53140.1 36.577 298 148 6 96 392 96 353 8.74e-45 160
Msa0785570 AT5G53140.2 36.577 298 148 6 96 392 96 353 8.74e-45 160
Msa0785570 AT4G31750.1 35.640 289 147 5 102 390 34 283 2.85e-43 153
Msa0785570 AT4G31750.3 35.640 289 147 5 102 390 34 283 2.85e-43 153
Msa0785570 AT4G31750.2 35.640 289 147 5 102 390 34 283 3.33e-43 153
Msa0785570 AT2G30020.1 34.602 289 153 5 102 388 140 394 1.16e-41 151
Msa0785570 AT1G07160.1 33.221 298 142 8 102 386 123 376 3.75e-38 141
Msa0785570 AT2G40180.1 33.121 314 168 7 81 387 108 386 5.19e-38 141
Msa0785570 AT4G31860.3 35.688 269 118 10 96 319 18 276 4.37e-34 128
Msa0785570 AT4G31860.1 33.677 291 138 10 96 341 18 298 8.11e-34 129
Msa0785570 AT4G31860.2 35.448 268 118 10 96 318 18 275 1.78e-33 126
Msa0785570 AT2G25070.1 31.338 284 144 9 101 341 23 298 1.59e-32 125
Msa0785570 AT2G25070.2 31.338 284 144 9 101 341 23 298 1.59e-32 125
Msa0785570 AT2G40860.4 33.333 291 153 10 103 387 296 551 2.36e-32 128
Msa0785570 AT2G40860.1 33.229 319 159 12 75 387 379 649 3.35e-32 128
Msa0785570 AT3G15260.2 33.904 292 143 10 102 387 42 289 6.83e-32 122
Msa0785570 AT3G15260.1 33.904 292 143 10 102 387 42 289 6.83e-32 122
Msa0785570 AT3G51470.2 33.333 285 142 10 109 384 36 281 6.27e-31 120
Msa0785570 AT3G51470.1 32.982 285 143 9 109 384 80 325 8.24e-31 121
Msa0785570 AT2G25620.1 29.223 373 205 11 35 387 24 357 1.83e-30 120
Msa0785570 AT2G25620.2 29.223 373 205 11 35 387 24 357 1.83e-30 120
Msa0785570 AT2G40860.2 33.708 267 145 9 75 335 379 619 7.24e-30 121
Msa0785570 AT4G32950.1 32.463 268 145 9 82 330 26 276 9.53e-30 117
Msa0785570 AT1G48040.1 32.700 263 136 9 132 384 116 347 1.27e-28 115
Msa0785570 AT1G22280.3 31.650 297 151 10 101 387 33 287 1.64e-28 113
Msa0785570 AT1G22280.1 32.313 294 147 10 101 387 33 281 9.69e-28 111
Msa0785570 AT3G16800.2 31.271 291 148 12 76 331 36 309 1.79e-27 112
Msa0785570 AT3G16800.1 31.271 291 148 12 76 331 36 309 1.79e-27 112
Msa0785570 AT3G16800.3 31.271 291 148 12 76 331 36 309 1.79e-27 112
Msa0785570 AT2G33700.1 32.046 259 131 7 132 384 123 342 2.96e-27 111
Msa0785570 AT3G17250.1 30.108 279 124 7 132 384 158 391 4.43e-27 112
Msa0785570 AT1G78200.1 30.241 291 160 8 101 387 32 283 1.30e-26 108
Msa0785570 AT1G78200.3 30.241 291 160 8 101 387 32 283 1.30e-26 108
Msa0785570 AT1G78200.2 30.241 291 160 8 101 387 32 283 1.30e-26 108
Msa0785570 AT3G62260.2 30.822 292 156 10 109 384 86 347 6.09e-26 108
Msa0785570 AT3G62260.3 31.698 265 143 9 128 384 23 257 7.19e-26 106
Msa0785570 AT3G62260.1 30.822 292 156 10 109 384 85 346 7.54e-26 107
Msa0785570 AT2G34740.1 30.686 277 145 7 114 386 101 334 1.68e-25 106
Msa0785570 AT5G26010.1 29.720 286 157 9 74 330 13 283 2.03e-25 105
Msa0785570 AT4G32950.2 31.395 258 141 9 79 317 23 263 2.95e-25 104
Msa0785570 AT1G78200.5 30.888 259 137 6 132 387 19 238 3.80e-25 102
Msa0785570 AT1G78200.4 30.888 259 137 6 132 387 19 238 3.80e-25 102
Msa0785570 AT4G28400.3 30.116 259 136 7 132 387 45 261 1.44e-24 102
Msa0785570 AT4G28400.1 29.310 290 159 8 102 387 36 283 1.80e-24 102
Msa0785570 AT1G34750.2 31.419 296 155 9 97 387 30 282 2.34e-24 102
Msa0785570 AT1G34750.1 31.419 296 155 9 97 387 30 282 2.34e-24 102
Msa0785570 AT1G34750.3 31.419 296 155 9 97 387 30 282 2.34e-24 102
Msa0785570 AT3G05640.2 31.944 288 152 11 76 330 33 309 2.73e-24 103
Msa0785570 AT3G05640.1 31.944 288 152 11 76 330 33 309 2.73e-24 103
Msa0785570 AT3G05640.3 31.944 288 152 11 76 330 33 309 2.73e-24 103
Msa0785570 AT2G20630.1 28.958 259 139 7 132 387 63 279 1.69e-23 99.4
Msa0785570 AT2G20630.2 32.512 203 115 5 132 331 63 246 7.24e-23 97.8
Msa0785570 AT5G27930.1 30.104 289 151 8 80 330 39 314 1.33e-22 98.6
Msa0785570 AT5G27930.2 30.104 289 151 8 80 330 39 314 1.33e-22 98.6
Msa0785570 AT2G40860.3 33.333 243 130 9 75 311 379 595 1.50e-22 100
Msa0785570 AT3G16800.4 41.429 140 65 5 209 331 75 214 2.52e-22 95.5
Msa0785570 AT3G16800.6 41.429 140 65 5 209 331 75 214 2.52e-22 95.5
Msa0785570 AT4G28400.2 32.287 223 128 6 102 320 36 239 3.61e-22 95.1
Msa0785570 AT1G18030.1 33.333 222 113 7 133 335 110 315 4.39e-22 96.7
Msa0785570 AT4G03415.1 31.408 277 126 8 104 330 70 332 4.83e-22 97.8
Msa0785570 AT4G03415.3 31.408 277 126 8 104 330 70 332 4.83e-22 97.8
Msa0785570 AT4G03415.2 31.408 277 126 8 104 330 70 332 4.83e-22 97.8
Msa0785570 AT2G34740.3 32.701 211 118 6 114 320 97 287 5.30e-22 95.9
Msa0785570 AT2G34740.2 32.701 211 118 6 114 320 115 305 8.74e-22 95.5
Msa0785570 AT2G20050.2 29.804 255 125 10 112 330 123 359 2.31e-21 97.1
Msa0785570 AT2G20050.1 29.804 255 125 10 112 330 123 359 2.44e-21 97.1
Msa0785570 AT5G01700.1 31.855 248 144 9 109 333 6 251 2.71e-21 94.4
Msa0785570 AT1G79630.1 30.175 285 136 9 109 330 75 359 6.45e-21 94.7
Msa0785570 AT5G01700.2 31.855 248 144 9 109 333 55 300 7.07e-21 93.6
Msa0785570 AT1G79630.8 30.175 285 136 9 109 330 71 355 7.44e-21 94.7
Msa0785570 AT1G34750.4 32.911 237 132 8 96 327 29 243 8.09e-21 91.3
Msa0785570 AT1G16220.1 30.712 267 138 9 109 330 72 336 1.47e-20 93.6
Msa0785570 AT1G18030.2 33.333 207 103 7 133 320 110 300 2.42e-20 90.9
Msa0785570 AT4G08260.1 28.623 276 130 9 114 388 1 210 3.50e-20 88.6
Msa0785570 AT5G36250.1 29.630 270 142 9 109 330 75 344 1.59e-19 90.5
Msa0785570 AT1G03590.1 30.855 269 125 8 109 330 68 322 2.08e-19 90.1
Msa0785570 AT4G33920.1 26.780 295 167 9 132 390 61 342 6.20e-19 88.2
Msa0785570 AT3G06270.1 26.032 315 157 11 112 388 68 344 6.46e-19 87.4
Msa0785570 AT5G02760.1 31.250 240 112 10 129 331 69 292 1.42e-18 87.0
Msa0785570 AT3G55050.1 27.152 302 148 12 132 387 84 359 1.87e-18 86.7
Msa0785570 AT3G55050.2 27.152 302 148 12 132 387 84 359 1.87e-18 86.7
Msa0785570 AT3G12620.2 28.163 245 129 9 124 333 75 307 2.60e-18 86.3
Msa0785570 AT3G12620.1 28.163 245 129 9 124 333 75 307 2.60e-18 86.3
Msa0785570 AT4G27800.1 25.915 328 167 9 101 388 59 350 3.15e-18 85.9
Msa0785570 AT1G79630.2 30.147 272 127 9 122 330 18 289 3.36e-18 86.3
Msa0785570 AT1G79630.7 30.147 272 127 9 122 330 18 289 3.36e-18 86.3
Msa0785570 AT1G79630.6 40.000 145 71 4 202 330 105 249 3.58e-18 85.9
Msa0785570 AT1G79630.3 40.000 145 71 4 202 330 105 249 3.58e-18 85.9
Msa0785570 AT1G79630.4 40.000 145 71 4 202 330 105 249 3.58e-18 85.9
Msa0785570 AT1G79630.5 40.000 145 71 4 202 330 105 249 3.58e-18 85.9
Msa0785570 AT5G66080.1 28.428 299 146 12 132 386 82 356 4.48e-18 85.5
Msa0785570 AT5G27930.3 28.620 297 156 10 64 317 18 301 1.26e-17 83.6
Msa0785570 AT3G02750.2 35.028 177 86 6 170 330 190 353 1.41e-17 84.7
Msa0785570 AT3G02750.1 35.028 177 86 6 170 330 190 353 1.41e-17 84.7
Msa0785570 AT3G27140.1 28.000 275 111 9 114 387 1 189 5.86e-17 80.1
Msa0785570 AT4G38520.2 28.216 241 114 7 132 331 81 303 1.13e-16 81.6
Msa0785570 AT4G38520.1 28.216 241 114 7 132 331 81 303 1.13e-16 81.6
Msa0785570 AT3G51370.1 28.000 300 154 14 132 390 79 357 3.46e-16 79.7
Msa0785570 AT3G51370.3 28.000 300 154 14 132 390 79 357 3.46e-16 79.7
Msa0785570 AT1G09160.2 28.761 226 126 8 133 340 69 277 4.12e-16 80.1
Msa0785570 AT1G09160.1 28.761 226 126 8 133 340 69 277 4.12e-16 80.1
Msa0785570 AT3G63320.2 30.131 229 99 9 209 389 85 300 1.20e-15 78.2
Msa0785570 AT4G27800.2 25.714 280 151 7 101 340 59 321 1.57e-14 74.7
Msa0785570 AT4G27800.3 25.714 280 151 7 101 340 59 321 1.69e-14 74.3
Msa0785570 AT3G16560.1 27.490 251 129 8 174 391 255 485 1.76e-14 75.5
Msa0785570 AT3G16560.4 27.490 251 129 8 174 391 255 485 1.76e-14 75.5
Msa0785570 AT3G16560.2 27.490 251 129 8 174 391 255 485 1.76e-14 75.5
Msa0785570 AT5G66080.2 31.737 167 70 4 203 331 40 200 9.93e-14 71.6
Msa0785570 AT3G63340.7 28.448 232 107 7 209 393 233 452 1.87e-13 72.8
Msa0785570 AT3G63340.8 28.448 232 107 7 209 393 233 452 1.90e-13 72.8
Msa0785570 AT3G63340.5 28.448 232 107 7 209 393 233 452 1.93e-13 72.8
Msa0785570 AT3G63340.1 28.448 232 107 7 209 393 233 452 1.93e-13 72.8
Msa0785570 AT3G63340.6 28.448 232 107 7 209 393 233 452 1.96e-13 72.8
Msa0785570 AT3G63340.3 28.448 232 107 7 209 393 233 452 1.96e-13 72.8
Msa0785570 AT3G63340.10 28.448 232 107 7 209 393 233 452 1.96e-13 72.8
Msa0785570 AT3G63340.4 28.448 232 107 7 209 393 233 452 1.96e-13 72.8
Msa0785570 AT3G63340.11 28.448 232 107 7 209 393 233 452 2.16e-13 72.4
Msa0785570 AT3G63340.12 28.448 232 107 7 209 393 233 452 2.40e-13 72.0
Msa0785570 AT3G51370.2 28.947 228 111 9 203 390 56 272 4.38e-13 69.7
Msa0785570 AT2G05050.1 34.921 126 60 4 264 388 87 191 1.02e-12 67.0
Msa0785570 AT1G68410.4 26.549 226 131 8 133 340 74 282 2.39e-12 68.6
Msa0785570 AT1G68410.3 26.549 226 131 8 133 340 74 282 2.39e-12 68.6
Msa0785570 AT1G68410.1 26.549 226 131 8 133 340 74 282 2.39e-12 68.6
Msa0785570 AT1G68410.2 26.549 226 131 8 133 340 74 282 2.39e-12 68.6
Msa0785570 AT1G47380.1 26.667 210 120 7 133 326 65 256 1.24e-11 66.2
Msa0785570 AT1G22280.2 31.169 154 81 6 101 249 33 166 1.70e-11 63.5
Msa0785570 AT3G63340.2 32.704 159 91 5 239 393 339 485 7.23e-11 64.7

Find 135 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGATGTTATTCCATATTT+AGG 0.180202 5_2:+70557472 None:intergenic
AACAATTAAATAATAGTAAT+AGG 0.227523 5_2:-70555936 Msa0785570:three_prime_UTR
GATCTAGCTTCTGTCGTTTC+CGG 0.236639 5_2:+70557632 None:intergenic
GAAGATTGTTCTCCTAAATA+TGG 0.244112 5_2:-70557484 Msa0785570:CDS
GGTGACTCCGCCGGGGTCTC+CGG 0.273090 5_2:-70556100 Msa0785570:CDS
CTGGAGGACGTGTGATCTAT+TGG 0.287230 5_2:-70556815 Msa0785570:CDS
AAGGTTAGAATTGTATCTTT+TGG 0.287458 5_2:-70555722 Msa0785570:three_prime_UTR
TACTTGCCAGTGATGGCTTA+TGG 0.299379 5_2:-70556185 Msa0785570:CDS
ACCTTCCGGTCGCCGGAGTT+TGG 0.312597 5_2:-70557698 Msa0785570:CDS
CAATCAATTGAAATGGTGTT+TGG 0.324836 5_2:+70557885 None:intergenic
TAGTAATAGGGATTGATTAA+TGG 0.332759 5_2:-70555923 Msa0785570:three_prime_UTR
TAGGGATTGATTAATGGAAT+TGG 0.336392 5_2:-70555917 Msa0785570:three_prime_UTR
CTTGAAGCCATATGTTATAT+CGG 0.354940 5_2:-70556256 Msa0785570:CDS
TTTCCCGCCACTTCACTTCC+CGG 0.368693 5_2:+70556081 None:intergenic
TGGCAAAGGTGGGAGGAAAA+TGG 0.370084 5_2:-70555811 Msa0785570:three_prime_UTR
GGTCGTGAGCTTGGCTCAAC+TGG 0.381676 5_2:+70557718 None:intergenic
GGAAGTGAAGTGGCGGGAAA+AGG 0.392404 5_2:-70556078 Msa0785570:CDS
CCTATGACGTGTACTGTGTC+TGG 0.401669 5_2:-70555862 Msa0785570:three_prime_UTR
CGAGCCGTTCTTTGCCGGAA+TGG 0.404570 5_2:-70556990 Msa0785570:CDS
TTGTGGAAGAAGAAAAGAAA+TGG 0.406396 5_2:-70557449 Msa0785570:CDS
GAGAGGACGGTGACTCCGCC+GGG 0.408202 5_2:-70556108 Msa0785570:CDS
ACAATTAAATAATAGTAATA+GGG 0.409494 5_2:-70555935 Msa0785570:three_prime_UTR
GAGGAATGGCAACACCATTC+CGG 0.415297 5_2:+70556976 None:intergenic
GAGCCAAGCTCACGACCTTC+CGG 0.415900 5_2:-70557712 Msa0785570:CDS
GCGTGGTGGTTGTTGATTTG+AGG 0.416094 5_2:-70555978 Msa0785570:CDS
ATTCTCGAGCCGTTCTTTGC+CGG 0.418494 5_2:-70556995 Msa0785570:CDS
CATTCTTGCGGTGGCGGTGG+TGG 0.426397 5_2:+70557595 None:intergenic
TCTTGCGGTGGCGGTGGTGG+TGG 0.426700 5_2:+70557598 None:intergenic
GAGAGAAAGAGAAGGTTGAC+TGG 0.429160 5_2:-70557196 Msa0785570:CDS
ACAGTACACGTCATAGGTTT+TGG 0.431564 5_2:+70555868 None:intergenic
AAGATCATTGTTTCGAATTG+TGG 0.434316 5_2:-70557020 Msa0785570:CDS
AGTAATGTAGTGTTTGATTG+AGG 0.435402 5_2:-70555748 Msa0785570:three_prime_UTR
TGAAACACAATCAATTGAAA+TGG 0.436412 5_2:+70557878 None:intergenic
ACTTGCCAGTGATGGCTTAT+GGG 0.436514 5_2:-70556184 Msa0785570:CDS
CTCGTCACTCCTCTCCGTTA+TGG 0.440591 5_2:+70556221 None:intergenic
GTGACTCCGCCGGGGTCTCC+GGG 0.447048 5_2:-70556099 Msa0785570:CDS
ATTTGAGATTAGCCTTACTT+TGG 0.451500 5_2:-70555595 Msa0785570:three_prime_UTR
GCCATATGTTATATCGGAAC+CGG 0.452791 5_2:-70556250 Msa0785570:CDS
TCGCATTCTTGCGGTGGCGG+TGG 0.464056 5_2:+70557592 None:intergenic
TGTCGTTTCCGGCTATTCTC+CGG 0.464903 5_2:+70557643 None:intergenic
GGCATTGGCGAGGAATAGTT+CGG 0.467216 5_2:-70556010 Msa0785570:CDS
GAAGTGAAGTGGCGGGAAAA+GGG 0.473008 5_2:-70556077 Msa0785570:CDS
GTAATGTAGTGTTTGATTGA+GGG 0.474123 5_2:-70555747 Msa0785570:three_prime_UTR
GGAGAGGACGGTGACTCCGC+CGG 0.475695 5_2:-70556109 Msa0785570:CDS
CCAGACACAGTACACGTCAT+AGG 0.476379 5_2:+70555862 None:intergenic
TCCGGTTCCGATATAACATA+TGG 0.479797 5_2:+70556249 None:intergenic
TTCGGTGTTTACGATGGTCA+TGG 0.485958 5_2:-70557373 Msa0785570:CDS
CAAAGGTGGGAGGAAAATGG+TGG 0.487789 5_2:-70555808 Msa0785570:three_prime_UTR
CGACCGGAAGGTCGTGAGCT+TGG 0.488300 5_2:+70557709 None:intergenic
TCCAACTCATCGGGTCGATC+CGG 0.491599 5_2:+70556852 None:intergenic
TAAATCCAAACTCCGGCGAC+CGG 0.493888 5_2:+70557693 None:intergenic
TTTGTTGACGAAGTTGGCAT+TGG 0.495559 5_2:-70556025 Msa0785570:CDS
TTAATCCGATCCAACTCATC+GGG 0.496648 5_2:+70556843 None:intergenic
CTCTCCGTTATGGTTACCTC+CGG 0.506227 5_2:+70556231 None:intergenic
AAAACAATTGATGTAAACTA+AGG 0.506596 5_2:-70555644 Msa0785570:three_prime_UTR
GCAAAACGACACGGCATGTA+GGG 0.509842 5_2:-70556154 Msa0785570:CDS
TCTCAATATAGACCAAAGTA+AGG 0.512299 5_2:+70555583 None:intergenic
TGGGATGGTGCAAGAGTGCT+TGG 0.516594 5_2:-70556795 Msa0785570:CDS
TGGAGGACGTGTGATCTATT+GGG 0.519957 5_2:-70556814 Msa0785570:CDS
CAGATCCACCGGAGAATAGC+CGG 0.520939 5_2:-70557651 Msa0785570:CDS
TAATGTAGTGTTTGATTGAG+GGG 0.521015 5_2:-70555746 Msa0785570:three_prime_UTR
TTTACTACCGTTGAAATACA+TGG 0.522704 5_2:-70557674 Msa0785570:CDS
AACATTTGTAGTGGTGAGGT+GGG 0.526480 5_2:+70557914 None:intergenic
TTGGCCATGTCAAGAGCTAT+TGG 0.527221 5_2:-70556768 Msa0785570:intron
GCTCACGACCTTCCGGTCGC+CGG 0.528939 5_2:-70557705 Msa0785570:CDS
TTGGATCGGATTAATAAAGC+TGG 0.531348 5_2:-70556834 Msa0785570:CDS
TTCGAAACAATGATCTTCTC+CGG 0.533894 5_2:+70557026 None:intergenic
TCCTCTTTCCTCCGATCACA+AGG 0.536632 5_2:-70556958 Msa0785570:intron
ACTCCTCATTGTGATGCTGT+TGG 0.539210 5_2:-70557077 Msa0785570:CDS
TCCAAACTCCGGCGACCGGA+AGG 0.540570 5_2:+70557697 None:intergenic
GAAATACATGGCAGATCCAC+CGG 0.540962 5_2:-70557662 Msa0785570:CDS
TATGGAATAACATCAGTTTG+TGG 0.541161 5_2:-70557466 Msa0785570:CDS
GCCGGATCGACCCGATGAGT+TGG 0.547516 5_2:-70556853 Msa0785570:CDS
GGGGTCTCCGGGAAGTGAAG+TGG 0.551828 5_2:-70556088 Msa0785570:CDS
AAACATTTGTAGTGGTGAGG+TGG 0.554062 5_2:+70557913 None:intergenic
TAGTGTTTGATTGAGGGGAA+AGG 0.555791 5_2:-70555741 Msa0785570:three_prime_UTR
TGCAAGAGTGCTTGGAGTGT+TGG 0.556663 5_2:-70556787 Msa0785570:CDS
GTGTCTCAAGGCGGAGAGGA+CGG 0.558698 5_2:-70556121 Msa0785570:CDS
CGTCAACAAAATTGAGGCAT+CGG 0.562946 5_2:+70556038 None:intergenic
AACACCATTCCGGCAAAGAA+CGG 0.566566 5_2:+70556986 None:intergenic
AAGTACTGATGAAGAATCAA+AGG 0.567543 5_2:-70557545 Msa0785570:CDS
ATTAATCCGATCCAACTCAT+CGG 0.568369 5_2:+70556842 None:intergenic
CAACTTCGTCAACAAAATTG+AGG 0.568402 5_2:+70556032 None:intergenic
ACTTCACTTCCCGGAGACCC+CGG 0.569577 5_2:+70556090 None:intergenic
TTGCGACTATGTGTAAAGAA+AGG 0.569645 5_2:-70557250 Msa0785570:CDS
GATCTTCTCCGGCGTAACAA+CGG 0.570545 5_2:+70557037 None:intergenic
GAGATTTGTTGTGGTGTGGT+CGG 0.576285 5_2:-70557763 Msa0785570:CDS
GGCGGGAAAAGGGTCAGATA+AGG 0.576494 5_2:-70556067 Msa0785570:CDS
CACGTCCCATAAGCCATCAC+TGG 0.578636 5_2:+70556179 None:intergenic
TGTTGTTGCCGTTGTTACGC+CGG 0.585472 5_2:-70557045 Msa0785570:CDS
TCAATGGCTGAGATTTGTTG+TGG 0.587476 5_2:-70557772 Msa0785570:CDS
CAGTGATGGCTTATGGGACG+TGG 0.587939 5_2:-70556178 Msa0785570:CDS
AAGAGAAAGAGAGAAAGAGA+AGG 0.590078 5_2:-70557204 Msa0785570:CDS
TCTCCGGGAAGTGAAGTGGC+GGG 0.590927 5_2:-70556084 Msa0785570:CDS
CTATGACGTGTACTGTGTCT+GGG 0.591382 5_2:-70555861 Msa0785570:three_prime_UTR
AACGAAACTAACCTTGTGAT+CGG 0.596571 5_2:+70556947 None:intergenic
GTCTCCGGGAAGTGAAGTGG+CGG 0.597167 5_2:-70556085 Msa0785570:CDS
GGCTGAGATTTGTTGTGGTG+TGG 0.597257 5_2:-70557767 Msa0785570:CDS
AAGGTGGGAGGAAAATGGTG+GGG 0.600490 5_2:-70555806 Msa0785570:three_prime_UTR
ATCGACCCGATGAGTTGGAT+CGG 0.600754 5_2:-70556848 Msa0785570:CDS
CATTTCTTCGGTGTTTACGA+TGG 0.601468 5_2:-70557379 Msa0785570:CDS
TGTCTGATACTTGCCAGTGA+TGG 0.604846 5_2:-70556192 Msa0785570:CDS
AAAGGTGGGAGGAAAATGGT+GGG 0.606076 5_2:-70555807 Msa0785570:three_prime_UTR
CTGGGACACCTATGATTCGT+AGG 0.612254 5_2:-70555843 Msa0785570:three_prime_UTR
CGTTTCCGGCTATTCTCCGG+TGG 0.614168 5_2:+70557646 None:intergenic
GGTGGTGCAGATGTGTCTCA+AGG 0.619444 5_2:-70556133 Msa0785570:CDS
TGGAGAAGAAACATTTGTAG+TGG 0.622232 5_2:+70557905 None:intergenic
GTGATCGGAGGAAAGAGGAA+TGG 0.624138 5_2:+70556962 None:intergenic
TGCAAAACGACACGGCATGT+AGG 0.625098 5_2:-70556155 Msa0785570:CDS
AAGAAACATTTGTAGTGGTG+AGG 0.628936 5_2:+70557910 None:intergenic
GGATCTGCCATGTATTTCAA+CGG 0.632939 5_2:+70557667 None:intergenic
TTCGGACAATGTTAGCGTGG+TGG 0.640919 5_2:-70555992 Msa0785570:CDS
TGACGAAGTTGGCATTGGCG+AGG 0.644130 5_2:-70556020 Msa0785570:CDS
ACATTTGTAGTGGTGAGGTG+GGG 0.644692 5_2:+70557915 None:intergenic
GGTGGTGGTGGTGAAAGAGA+TGG 0.646267 5_2:+70557610 None:intergenic
TAGTTCGGACAATGTTAGCG+TGG 0.649801 5_2:-70555995 Msa0785570:CDS
ACCTTGTGATCGGAGGAAAG+AGG 0.650261 5_2:+70556957 None:intergenic
GAACCAACAGCATCACAATG+AGG 0.652964 5_2:+70557074 None:intergenic
CTCACCAATAGCTCTTGACA+TGG 0.655791 5_2:+70556764 None:intergenic
AAACGACACGGCATGTAGGG+TGG 0.658006 5_2:-70556151 Msa0785570:CDS
GGAACCGGAGGTAACCATAA+CGG 0.658388 5_2:-70556235 Msa0785570:CDS
GGACGTGGTGCAAAACGACA+CGG 0.659962 5_2:-70556163 Msa0785570:CDS
ACGGTAGTAAATCCAAACTC+CGG 0.667701 5_2:+70557686 None:intergenic
GATCGGATTAATAAAGCTGG+AGG 0.670158 5_2:-70556831 Msa0785570:CDS
ACTACATTACTAAAATCACA+TGG 0.675404 5_2:+70555760 None:intergenic
GGTTGACTGGAAGTCAACGA+TGG 0.683076 5_2:-70557183 Msa0785570:CDS
ATATGTTATATCGGAACCGG+AGG 0.683158 5_2:-70556247 Msa0785570:CDS
AGATGTGTCTCAAGGCGGAG+AGG 0.686437 5_2:-70556125 Msa0785570:CDS
GGACGTGTGATCTATTGGGA+TGG 0.690438 5_2:-70556810 Msa0785570:CDS
GAAACTAACCTTGTGATCGG+AGG 0.697857 5_2:+70556950 None:intergenic
AGAGGACGGTGACTCCGCCG+GGG 0.704487 5_2:-70556107 Msa0785570:CDS
CATAACGGAGAGGAGTGACG+AGG 0.719275 5_2:-70556220 Msa0785570:CDS
CGGAGGTAACCATAACGGAG+AGG 0.720146 5_2:-70556230 Msa0785570:CDS
GGTGCAGATGTGTCTCAAGG+CGG 0.721838 5_2:-70556130 Msa0785570:CDS
TCACTTCCCGGAGACCCCGG+CGG 0.744978 5_2:+70556093 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAATTTATTAATTTTT+AGG - chr5_2:70556740-70556759 Msa0785570:intron 0.0%
!!! TTTAAAATTTATTAATTTTT+AGG - chr5_2:70556740-70556759 Msa0785570:intron 0.0%
!!! TACATAATAATTTTTTTTAC+TGG - chr5_2:70556140-70556159 Msa0785570:CDS 10.0%
!! AACAATTAAATAATAGTAAT+AGG - chr5_2:70557517-70557536 Msa0785570:CDS 10.0%
!! ACAATTAAATAATAGTAATA+GGG - chr5_2:70557518-70557537 Msa0785570:CDS 10.0%
!!! TACATAATAATTTTTTTTAC+TGG - chr5_2:70556140-70556159 Msa0785570:CDS 10.0%
!! AACAATTAAATAATAGTAAT+AGG - chr5_2:70557517-70557536 Msa0785570:CDS 10.0%
!! ACAATTAAATAATAGTAATA+GGG - chr5_2:70557518-70557537 Msa0785570:CDS 10.0%
!! CATGATATATTATATAAACA+TGG + chr5_2:70556861-70556880 None:intergenic 15.0%
!! CATGTTTATATAATATATCA+TGG - chr5_2:70556859-70556878 Msa0785570:intron 15.0%
!!! TTATTATGGTTTATTTTTGT+AGG - chr5_2:70557165-70557184 Msa0785570:CDS 15.0%
!!! TATTATGGTTTATTTTTGTA+GGG - chr5_2:70557166-70557185 Msa0785570:CDS 15.0%
!! CATGATATATTATATAAACA+TGG + chr5_2:70556861-70556880 None:intergenic 15.0%
!! CATGTTTATATAATATATCA+TGG - chr5_2:70556859-70556878 Msa0785570:intron 15.0%
!!! TTATTATGGTTTATTTTTGT+AGG - chr5_2:70557165-70557184 Msa0785570:CDS 15.0%
!!! TATTATGGTTTATTTTTGTA+GGG - chr5_2:70557166-70557185 Msa0785570:CDS 15.0%
!!! TTCAATTCAATTTTGATCAA+TGG - chr5_2:70555665-70555684 Msa0785570:three_prime_UTR 20.0%
!! TATATACAACAGAAAATGAA+GGG + chr5_2:70556542-70556561 None:intergenic 20.0%
!! ATATATACAACAGAAAATGA+AGG + chr5_2:70556543-70556562 None:intergenic 20.0%
!!! AAGATGGTTCTAAATTATTA+TGG - chr5_2:70557151-70557170 Msa0785570:CDS 20.0%
!!! ATTATGGTTTATTTTTGTAG+GGG - chr5_2:70557167-70557186 Msa0785570:CDS 20.0%
!! AAAACAATTGATGTAAACTA+AGG - chr5_2:70557809-70557828 Msa0785570:five_prime_UTR 20.0%
!!! TTCAATTCAATTTTGATCAA+TGG - chr5_2:70555665-70555684 Msa0785570:three_prime_UTR 20.0%
!! TATATACAACAGAAAATGAA+GGG + chr5_2:70556542-70556561 None:intergenic 20.0%
!! ATATATACAACAGAAAATGA+AGG + chr5_2:70556543-70556562 None:intergenic 20.0%
!!! AAGATGGTTCTAAATTATTA+TGG - chr5_2:70557151-70557170 Msa0785570:CDS 20.0%
!!! ATTATGGTTTATTTTTGTAG+GGG - chr5_2:70557167-70557186 Msa0785570:CDS 20.0%
!! AAAACAATTGATGTAAACTA+AGG - chr5_2:70557809-70557828 Msa0785570:five_prime_UTR 20.0%
! TGAAACACAATCAATTGAAA+TGG + chr5_2:70555578-70555597 None:intergenic 25.0%
! ACTGATGTTATTCCATATTT+AGG + chr5_2:70555984-70556003 None:intergenic 25.0%
! GAAAAACAAGATCATTTCTT+CGG - chr5_2:70556062-70556081 Msa0785570:CDS 25.0%
!!! GTTGATGTGTTTTTTTGTAT+AGG - chr5_2:70556180-70556199 Msa0785570:CDS 25.0%
!! TTTTATTAGAATGGATGAAG+AGG - chr5_2:70556300-70556319 Msa0785570:intron 25.0%
!! GTATTTGATTAGTTCAAATG+TGG - chr5_2:70556762-70556781 Msa0785570:intron 25.0%
!! TTGTGCATGATTTCATTTTA+CGG - chr5_2:70556785-70556804 Msa0785570:CDS 25.0%
!! TATGATATTTTGTATCACAC+TGG + chr5_2:70556987-70557006 None:intergenic 25.0%
!!! TTTTTTTAGCACAATATGTG+TGG + chr5_2:70557106-70557125 None:intergenic 25.0%
! TATGCATCATTATTGAAAGA+TGG - chr5_2:70557135-70557154 Msa0785570:CDS 25.0%
! TAGTAATAGGGATTGATTAA+TGG - chr5_2:70557530-70557549 Msa0785570:CDS 25.0%
! TAAAAAATCCTACGAATCAT+AGG + chr5_2:70557621-70557640 None:intergenic 25.0%
!!! TGATTCGTAGGATTTTTTAT+TGG - chr5_2:70557622-70557641 Msa0785570:CDS 25.0%
! AATCATCAGAAAAAATCTCA+AGG + chr5_2:70557673-70557692 None:intergenic 25.0%
! ACTACATTACTAAAATCACA+TGG + chr5_2:70557696-70557715 None:intergenic 25.0%
!! AAGGTTAGAATTGTATCTTT+TGG - chr5_2:70557731-70557750 Msa0785570:CDS 25.0%
!! AGGTTAGAATTGTATCTTTT+GGG - chr5_2:70557732-70557751 Msa0785570:CDS 25.0%
! TGAAACACAATCAATTGAAA+TGG + chr5_2:70555578-70555597 None:intergenic 25.0%
! ACTGATGTTATTCCATATTT+AGG + chr5_2:70555984-70556003 None:intergenic 25.0%
! GAAAAACAAGATCATTTCTT+CGG - chr5_2:70556062-70556081 Msa0785570:CDS 25.0%
!!! GTTGATGTGTTTTTTTGTAT+AGG - chr5_2:70556180-70556199 Msa0785570:CDS 25.0%
!! TTTTATTAGAATGGATGAAG+AGG - chr5_2:70556300-70556319 Msa0785570:intron 25.0%
!! GTATTTGATTAGTTCAAATG+TGG - chr5_2:70556762-70556781 Msa0785570:intron 25.0%
!! TTGTGCATGATTTCATTTTA+CGG - chr5_2:70556785-70556804 Msa0785570:CDS 25.0%
!! TATGATATTTTGTATCACAC+TGG + chr5_2:70556987-70557006 None:intergenic 25.0%
!!! TTTTTTTAGCACAATATGTG+TGG + chr5_2:70557106-70557125 None:intergenic 25.0%
! TATGCATCATTATTGAAAGA+TGG - chr5_2:70557135-70557154 Msa0785570:CDS 25.0%
! TAGTAATAGGGATTGATTAA+TGG - chr5_2:70557530-70557549 Msa0785570:CDS 25.0%
! TAAAAAATCCTACGAATCAT+AGG + chr5_2:70557621-70557640 None:intergenic 25.0%
!!! TGATTCGTAGGATTTTTTAT+TGG - chr5_2:70557622-70557641 Msa0785570:CDS 25.0%
! AATCATCAGAAAAAATCTCA+AGG + chr5_2:70557673-70557692 None:intergenic 25.0%
! ACTACATTACTAAAATCACA+TGG + chr5_2:70557696-70557715 None:intergenic 25.0%
!! AAGGTTAGAATTGTATCTTT+TGG - chr5_2:70557731-70557750 Msa0785570:CDS 25.0%
!! AGGTTAGAATTGTATCTTTT+GGG - chr5_2:70557732-70557751 Msa0785570:CDS 25.0%
CAATCAATTGAAATGGTGTT+TGG + chr5_2:70555571-70555590 None:intergenic 30.0%
TTTACTACCGTTGAAATACA+TGG - chr5_2:70555779-70555798 Msa0785570:three_prime_UTR 30.0%
!! AAGTACTGATGAAGAATCAA+AGG - chr5_2:70555908-70555927 Msa0785570:three_prime_UTR 30.0%
GAAGATTGTTCTCCTAAATA+TGG - chr5_2:70555969-70555988 Msa0785570:CDS 30.0%
TATGGAATAACATCAGTTTG+TGG - chr5_2:70555987-70556006 Msa0785570:CDS 30.0%
TTGTGGAAGAAGAAAAGAAA+TGG - chr5_2:70556004-70556023 Msa0785570:CDS 30.0%
!!! ACTGGATCTGTTTTTTAATC+AGG - chr5_2:70556158-70556177 Msa0785570:CDS 30.0%
!!! GGAGAAGAGTTTTATTAGAA+TGG - chr5_2:70556291-70556310 Msa0785570:intron 30.0%
AAGATCATTGTTTCGAATTG+TGG - chr5_2:70556433-70556452 Msa0785570:intron 30.0%
! CAAAATTTACTTGTTGATCG+TGG - chr5_2:70556909-70556928 Msa0785570:intron 30.0%
ATCACGATCAATAAGTAGTT+TGG + chr5_2:70556954-70556973 None:intergenic 30.0%
ACGATTTAACATCAACATGT+AGG + chr5_2:70557057-70557076 None:intergenic 30.0%
CAATAATGATGCATAACGTA+TGG + chr5_2:70557130-70557149 None:intergenic 30.0%
CTTGAAGCCATATGTTATAT+CGG - chr5_2:70557197-70557216 Msa0785570:CDS 30.0%
TAGGGATTGATTAATGGAAT+TGG - chr5_2:70557536-70557555 Msa0785570:CDS 30.0%
!!! GTAGGATTTTTTATTGGCAA+AGG - chr5_2:70557628-70557647 Msa0785570:CDS 30.0%
!!! GATTTTTTATTGGCAAAGGT+GGG - chr5_2:70557632-70557651 Msa0785570:CDS 30.0%
AGTAATGTAGTGTTTGATTG+AGG - chr5_2:70557705-70557724 Msa0785570:CDS 30.0%
GTAATGTAGTGTTTGATTGA+GGG - chr5_2:70557706-70557725 Msa0785570:CDS 30.0%
TAATGTAGTGTTTGATTGAG+GGG - chr5_2:70557707-70557726 Msa0785570:CDS 30.0%
!! TGTATCTTTTGGGAAAGAAT+TGG - chr5_2:70557742-70557761 Msa0785570:CDS 30.0%
TAAGGCATATCGTAAAAAGA+AGG - chr5_2:70557827-70557846 Msa0785570:five_prime_UTR 30.0%
!! ATTTGAGATTAGCCTTACTT+TGG - chr5_2:70557858-70557877 Msa0785570:five_prime_UTR 30.0%
TCTCAATATAGACCAAAGTA+AGG + chr5_2:70557873-70557892 None:intergenic 30.0%
CAATCAATTGAAATGGTGTT+TGG + chr5_2:70555571-70555590 None:intergenic 30.0%
TTTACTACCGTTGAAATACA+TGG - chr5_2:70555779-70555798 Msa0785570:three_prime_UTR 30.0%
!! AAGTACTGATGAAGAATCAA+AGG - chr5_2:70555908-70555927 Msa0785570:three_prime_UTR 30.0%
GAAGATTGTTCTCCTAAATA+TGG - chr5_2:70555969-70555988 Msa0785570:CDS 30.0%
TATGGAATAACATCAGTTTG+TGG - chr5_2:70555987-70556006 Msa0785570:CDS 30.0%
TTGTGGAAGAAGAAAAGAAA+TGG - chr5_2:70556004-70556023 Msa0785570:CDS 30.0%
!!! ACTGGATCTGTTTTTTAATC+AGG - chr5_2:70556158-70556177 Msa0785570:CDS 30.0%
!!! GGAGAAGAGTTTTATTAGAA+TGG - chr5_2:70556291-70556310 Msa0785570:intron 30.0%
AAGATCATTGTTTCGAATTG+TGG - chr5_2:70556433-70556452 Msa0785570:intron 30.0%
! CAAAATTTACTTGTTGATCG+TGG - chr5_2:70556909-70556928 Msa0785570:intron 30.0%
ATCACGATCAATAAGTAGTT+TGG + chr5_2:70556954-70556973 None:intergenic 30.0%
ACGATTTAACATCAACATGT+AGG + chr5_2:70557057-70557076 None:intergenic 30.0%
CAATAATGATGCATAACGTA+TGG + chr5_2:70557130-70557149 None:intergenic 30.0%
CTTGAAGCCATATGTTATAT+CGG - chr5_2:70557197-70557216 Msa0785570:CDS 30.0%
TAGGGATTGATTAATGGAAT+TGG - chr5_2:70557536-70557555 Msa0785570:CDS 30.0%
!!! GTAGGATTTTTTATTGGCAA+AGG - chr5_2:70557628-70557647 Msa0785570:CDS 30.0%
!!! GATTTTTTATTGGCAAAGGT+GGG - chr5_2:70557632-70557651 Msa0785570:CDS 30.0%
AGTAATGTAGTGTTTGATTG+AGG - chr5_2:70557705-70557724 Msa0785570:CDS 30.0%
GTAATGTAGTGTTTGATTGA+GGG - chr5_2:70557706-70557725 Msa0785570:CDS 30.0%
TAATGTAGTGTTTGATTGAG+GGG - chr5_2:70557707-70557726 Msa0785570:CDS 30.0%
!! TGTATCTTTTGGGAAAGAAT+TGG - chr5_2:70557742-70557761 Msa0785570:CDS 30.0%
TAAGGCATATCGTAAAAAGA+AGG - chr5_2:70557827-70557846 Msa0785570:five_prime_UTR 30.0%
!! ATTTGAGATTAGCCTTACTT+TGG - chr5_2:70557858-70557877 Msa0785570:five_prime_UTR 30.0%
TCTCAATATAGACCAAAGTA+AGG + chr5_2:70557873-70557892 None:intergenic 30.0%
AAGAAACATTTGTAGTGGTG+AGG + chr5_2:70555546-70555565 None:intergenic 35.0%
TGGAGAAGAAACATTTGTAG+TGG + chr5_2:70555551-70555570 None:intergenic 35.0%
TTGCGACTATGTGTAAAGAA+AGG - chr5_2:70556203-70556222 Msa0785570:CDS 35.0%
AAGAGAAAGAGAGAAAGAGA+AGG - chr5_2:70556249-70556268 Msa0785570:CDS 35.0%
TTCGAAACAATGATCTTCTC+CGG + chr5_2:70556430-70556449 None:intergenic 35.0%
AACGAAACTAACCTTGTGAT+CGG + chr5_2:70556509-70556528 None:intergenic 35.0%
ATTAATCCGATCCAACTCAT+CGG + chr5_2:70556614-70556633 None:intergenic 35.0%
TTGGATCGGATTAATAAAGC+TGG - chr5_2:70556619-70556638 Msa0785570:intron 35.0%
! TGCATGATTTCATTTTACGG+TGG - chr5_2:70556788-70556807 Msa0785570:CDS 35.0%
TCATGTTACCCTTGATTCAT+AGG - chr5_2:70556828-70556847 Msa0785570:CDS 35.0%
GTTTGGTATCACAATTGTGT+CGG + chr5_2:70556937-70556956 None:intergenic 35.0%
ATATGTGTGGTATATGACGA+TGG + chr5_2:70557093-70557112 None:intergenic 35.0%
CAACTTCGTCAACAAAATTG+AGG + chr5_2:70557424-70557443 None:intergenic 35.0%
! CTCAATTTTGTTGACGAAGT+TGG - chr5_2:70557422-70557441 Msa0785570:CDS 35.0%
!!! GGATTTTTTATTGGCAAAGG+TGG - chr5_2:70557631-70557650 Msa0785570:CDS 35.0%
AAGAAACATTTGTAGTGGTG+AGG + chr5_2:70555546-70555565 None:intergenic 35.0%
TGGAGAAGAAACATTTGTAG+TGG + chr5_2:70555551-70555570 None:intergenic 35.0%
TTGCGACTATGTGTAAAGAA+AGG - chr5_2:70556203-70556222 Msa0785570:CDS 35.0%
AAGAGAAAGAGAGAAAGAGA+AGG - chr5_2:70556249-70556268 Msa0785570:CDS 35.0%
TTCGAAACAATGATCTTCTC+CGG + chr5_2:70556430-70556449 None:intergenic 35.0%
AACGAAACTAACCTTGTGAT+CGG + chr5_2:70556509-70556528 None:intergenic 35.0%
ATTAATCCGATCCAACTCAT+CGG + chr5_2:70556614-70556633 None:intergenic 35.0%
TTGGATCGGATTAATAAAGC+TGG - chr5_2:70556619-70556638 Msa0785570:intron 35.0%
! TGCATGATTTCATTTTACGG+TGG - chr5_2:70556788-70556807 Msa0785570:CDS 35.0%
TCATGTTACCCTTGATTCAT+AGG - chr5_2:70556828-70556847 Msa0785570:CDS 35.0%
GTTTGGTATCACAATTGTGT+CGG + chr5_2:70556937-70556956 None:intergenic 35.0%
ATATGTGTGGTATATGACGA+TGG + chr5_2:70557093-70557112 None:intergenic 35.0%
CAACTTCGTCAACAAAATTG+AGG + chr5_2:70557424-70557443 None:intergenic 35.0%
! CTCAATTTTGTTGACGAAGT+TGG - chr5_2:70557422-70557441 Msa0785570:CDS 35.0%
!!! GGATTTTTTATTGGCAAAGG+TGG - chr5_2:70557631-70557650 Msa0785570:CDS 35.0%
AACATTTGTAGTGGTGAGGT+GGG + chr5_2:70555542-70555561 None:intergenic 40.0%
AAACATTTGTAGTGGTGAGG+TGG + chr5_2:70555543-70555562 None:intergenic 40.0%
!! TCAATGGCTGAGATTTGTTG+TGG - chr5_2:70555681-70555700 Msa0785570:three_prime_UTR 40.0%
ACGGTAGTAAATCCAAACTC+CGG + chr5_2:70555770-70555789 None:intergenic 40.0%
GGATCTGCCATGTATTTCAA+CGG + chr5_2:70555789-70555808 None:intergenic 40.0%
! ACTGTGTTTTCGCATTCTTG+CGG + chr5_2:70555873-70555892 None:intergenic 40.0%
!! CATTTCTTCGGTGTTTACGA+TGG - chr5_2:70556074-70556093 Msa0785570:CDS 40.0%
TTAATCCGATCCAACTCATC+GGG + chr5_2:70556613-70556632 None:intergenic 40.0%
GATCGGATTAATAAAGCTGG+AGG - chr5_2:70556622-70556641 Msa0785570:intron 40.0%
TGTTACCCTTGATTCATAGG+TGG - chr5_2:70556831-70556850 Msa0785570:CDS 40.0%
GACAACCACCTATGAATCAA+GGG + chr5_2:70556839-70556858 None:intergenic 40.0%
GCCATATGTTATATCGGAAC+CGG - chr5_2:70557203-70557222 Msa0785570:CDS 40.0%
TCCGGTTCCGATATAACATA+TGG + chr5_2:70557207-70557226 None:intergenic 40.0%
ATATGTTATATCGGAACCGG+AGG - chr5_2:70557206-70557225 Msa0785570:CDS 40.0%
CGTCAACAAAATTGAGGCAT+CGG + chr5_2:70557418-70557437 None:intergenic 40.0%
TTTGTTGACGAAGTTGGCAT+TGG - chr5_2:70557428-70557447 Msa0785570:CDS 40.0%
!! TACACGTCATAGGTTTTGGT+CGG + chr5_2:70557584-70557603 None:intergenic 40.0%
! ACAGTACACGTCATAGGTTT+TGG + chr5_2:70557588-70557607 None:intergenic 40.0%
! TTTTTATTGGCAAAGGTGGG+AGG - chr5_2:70557635-70557654 Msa0785570:CDS 40.0%
TAGTGTTTGATTGAGGGGAA+AGG - chr5_2:70557712-70557731 Msa0785570:CDS 40.0%
AACATTTGTAGTGGTGAGGT+GGG + chr5_2:70555542-70555561 None:intergenic 40.0%
AAACATTTGTAGTGGTGAGG+TGG + chr5_2:70555543-70555562 None:intergenic 40.0%
!! TCAATGGCTGAGATTTGTTG+TGG - chr5_2:70555681-70555700 Msa0785570:three_prime_UTR 40.0%
ACGGTAGTAAATCCAAACTC+CGG + chr5_2:70555770-70555789 None:intergenic 40.0%
GGATCTGCCATGTATTTCAA+CGG + chr5_2:70555789-70555808 None:intergenic 40.0%
! ACTGTGTTTTCGCATTCTTG+CGG + chr5_2:70555873-70555892 None:intergenic 40.0%
!! CATTTCTTCGGTGTTTACGA+TGG - chr5_2:70556074-70556093 Msa0785570:CDS 40.0%
TTAATCCGATCCAACTCATC+GGG + chr5_2:70556613-70556632 None:intergenic 40.0%
GATCGGATTAATAAAGCTGG+AGG - chr5_2:70556622-70556641 Msa0785570:intron 40.0%
TGTTACCCTTGATTCATAGG+TGG - chr5_2:70556831-70556850 Msa0785570:CDS 40.0%
GACAACCACCTATGAATCAA+GGG + chr5_2:70556839-70556858 None:intergenic 40.0%
GCCATATGTTATATCGGAAC+CGG - chr5_2:70557203-70557222 Msa0785570:CDS 40.0%
TCCGGTTCCGATATAACATA+TGG + chr5_2:70557207-70557226 None:intergenic 40.0%
ATATGTTATATCGGAACCGG+AGG - chr5_2:70557206-70557225 Msa0785570:CDS 40.0%
CGTCAACAAAATTGAGGCAT+CGG + chr5_2:70557418-70557437 None:intergenic 40.0%
TTTGTTGACGAAGTTGGCAT+TGG - chr5_2:70557428-70557447 Msa0785570:CDS 40.0%
!! TACACGTCATAGGTTTTGGT+CGG + chr5_2:70557584-70557603 None:intergenic 40.0%
! ACAGTACACGTCATAGGTTT+TGG + chr5_2:70557588-70557607 None:intergenic 40.0%
! TTTTTATTGGCAAAGGTGGG+AGG - chr5_2:70557635-70557654 Msa0785570:CDS 40.0%
TAGTGTTTGATTGAGGGGAA+AGG - chr5_2:70557712-70557731 Msa0785570:CDS 40.0%
ACATTTGTAGTGGTGAGGTG+GGG + chr5_2:70555541-70555560 None:intergenic 45.0%
!! GAGATTTGTTGTGGTGTGGT+CGG - chr5_2:70555690-70555709 Msa0785570:three_prime_UTR 45.0%
GAAATACATGGCAGATCCAC+CGG - chr5_2:70555791-70555810 Msa0785570:three_prime_UTR 45.0%
! GATCTAGCTTCTGTCGTTTC+CGG + chr5_2:70555824-70555843 None:intergenic 45.0%
!! TTCGGTGTTTACGATGGTCA+TGG - chr5_2:70556080-70556099 Msa0785570:CDS 45.0%
GAGAGAAAGAGAAGGTTGAC+TGG - chr5_2:70556257-70556276 Msa0785570:CDS 45.0%
ACTCCTCATTGTGATGCTGT+TGG - chr5_2:70556376-70556395 Msa0785570:intron 45.0%
GAACCAACAGCATCACAATG+AGG + chr5_2:70556382-70556401 None:intergenic 45.0%
AACACCATTCCGGCAAAGAA+CGG + chr5_2:70556470-70556489 None:intergenic 45.0%
GAAACTAACCTTGTGATCGG+AGG + chr5_2:70556506-70556525 None:intergenic 45.0%
TGGAGGACGTGTGATCTATT+GGG - chr5_2:70556639-70556658 Msa0785570:intron 45.0%
TTGGCCATGTCAAGAGCTAT+TGG - chr5_2:70556685-70556704 Msa0785570:intron 45.0%
CTCACCAATAGCTCTTGACA+TGG + chr5_2:70556692-70556711 None:intergenic 45.0%
GGACAACCACCTATGAATCA+AGG + chr5_2:70556840-70556859 None:intergenic 45.0%
TGTCTGATACTTGCCAGTGA+TGG - chr5_2:70557261-70557280 Msa0785570:intron 45.0%
TACTTGCCAGTGATGGCTTA+TGG - chr5_2:70557268-70557287 Msa0785570:intron 45.0%
ACTTGCCAGTGATGGCTTAT+GGG - chr5_2:70557269-70557288 Msa0785570:intron 45.0%
TAGTTCGGACAATGTTAGCG+TGG - chr5_2:70557458-70557477 Msa0785570:CDS 45.0%
CTATGACGTGTACTGTGTCT+GGG - chr5_2:70557592-70557611 Msa0785570:CDS 45.0%
AAAGGTGGGAGGAAAATGGT+GGG - chr5_2:70557646-70557665 Msa0785570:CDS 45.0%
ACATTTGTAGTGGTGAGGTG+GGG + chr5_2:70555541-70555560 None:intergenic 45.0%
!! GAGATTTGTTGTGGTGTGGT+CGG - chr5_2:70555690-70555709 Msa0785570:three_prime_UTR 45.0%
GAAATACATGGCAGATCCAC+CGG - chr5_2:70555791-70555810 Msa0785570:three_prime_UTR 45.0%
! GATCTAGCTTCTGTCGTTTC+CGG + chr5_2:70555824-70555843 None:intergenic 45.0%
!! TTCGGTGTTTACGATGGTCA+TGG - chr5_2:70556080-70556099 Msa0785570:CDS 45.0%
GAGAGAAAGAGAAGGTTGAC+TGG - chr5_2:70556257-70556276 Msa0785570:CDS 45.0%
ACTCCTCATTGTGATGCTGT+TGG - chr5_2:70556376-70556395 Msa0785570:intron 45.0%
GAACCAACAGCATCACAATG+AGG + chr5_2:70556382-70556401 None:intergenic 45.0%
AACACCATTCCGGCAAAGAA+CGG + chr5_2:70556470-70556489 None:intergenic 45.0%
GAAACTAACCTTGTGATCGG+AGG + chr5_2:70556506-70556525 None:intergenic 45.0%
TGGAGGACGTGTGATCTATT+GGG - chr5_2:70556639-70556658 Msa0785570:intron 45.0%
TTGGCCATGTCAAGAGCTAT+TGG - chr5_2:70556685-70556704 Msa0785570:intron 45.0%
CTCACCAATAGCTCTTGACA+TGG + chr5_2:70556692-70556711 None:intergenic 45.0%
GGACAACCACCTATGAATCA+AGG + chr5_2:70556840-70556859 None:intergenic 45.0%
TGTCTGATACTTGCCAGTGA+TGG - chr5_2:70557261-70557280 Msa0785570:intron 45.0%
TACTTGCCAGTGATGGCTTA+TGG - chr5_2:70557268-70557287 Msa0785570:intron 45.0%
ACTTGCCAGTGATGGCTTAT+GGG - chr5_2:70557269-70557288 Msa0785570:intron 45.0%
TAGTTCGGACAATGTTAGCG+TGG - chr5_2:70557458-70557477 Msa0785570:CDS 45.0%
CTATGACGTGTACTGTGTCT+GGG - chr5_2:70557592-70557611 Msa0785570:CDS 45.0%
AAAGGTGGGAGGAAAATGGT+GGG - chr5_2:70557646-70557665 Msa0785570:CDS 45.0%
!! TAAAAAAAATTATTATGTAA+CGG + chr5_2:70556139-70556158 None:intergenic 5.0%
!!! GATTTATTAATTTTTTTTAA+AGG - chr5_2:70557891-70557910 Msa0785570:five_prime_UTR 5.0%
!! TAAAAAAAATTATTATGTAA+CGG + chr5_2:70556139-70556158 None:intergenic 5.0%
!!! GATTTATTAATTTTTTTTAA+AGG - chr5_2:70557891-70557910 Msa0785570:five_prime_UTR 5.0%
!! GGCTGAGATTTGTTGTGGTG+TGG - chr5_2:70555686-70555705 Msa0785570:three_prime_UTR 50.0%
TAAATCCAAACTCCGGCGAC+CGG + chr5_2:70555763-70555782 None:intergenic 50.0%
! TGTCGTTTCCGGCTATTCTC+CGG + chr5_2:70555813-70555832 None:intergenic 50.0%
! TTTTCGCATTCTTGCGGTGG+CGG + chr5_2:70555867-70555886 None:intergenic 50.0%
! GTGTTTTCGCATTCTTGCGG+TGG + chr5_2:70555870-70555889 None:intergenic 50.0%
GGTTGACTGGAAGTCAACGA+TGG - chr5_2:70556270-70556289 Msa0785570:intron 50.0%
TGTTGTTGCCGTTGTTACGC+CGG - chr5_2:70556408-70556427 Msa0785570:intron 50.0%
GATCTTCTCCGGCGTAACAA+CGG + chr5_2:70556419-70556438 None:intergenic 50.0%
ATTCTCGAGCCGTTCTTTGC+CGG - chr5_2:70556458-70556477 Msa0785570:intron 50.0%
GAGGAATGGCAACACCATTC+CGG + chr5_2:70556480-70556499 None:intergenic 50.0%
GTGATCGGAGGAAAGAGGAA+TGG + chr5_2:70556494-70556513 None:intergenic 50.0%
TCCTCTTTCCTCCGATCACA+AGG - chr5_2:70556495-70556514 Msa0785570:intron 50.0%
ACCTTGTGATCGGAGGAAAG+AGG + chr5_2:70556499-70556518 None:intergenic 50.0%
! ATCGACCCGATGAGTTGGAT+CGG - chr5_2:70556605-70556624 Msa0785570:intron 50.0%
CTGGAGGACGTGTGATCTAT+TGG - chr5_2:70556638-70556657 Msa0785570:intron 50.0%
GGACGTGTGATCTATTGGGA+TGG - chr5_2:70556643-70556662 Msa0785570:intron 50.0%
!! TGCAAGAGTGCTTGGAGTGT+TGG - chr5_2:70556666-70556685 Msa0785570:intron 50.0%
GGAACCGGAGGTAACCATAA+CGG - chr5_2:70557218-70557237 Msa0785570:CDS 50.0%
CTCTCCGTTATGGTTACCTC+CGG + chr5_2:70557225-70557244 None:intergenic 50.0%
TGCAAAACGACACGGCATGT+AGG - chr5_2:70557298-70557317 Msa0785570:intron 50.0%
GCAAAACGACACGGCATGTA+GGG - chr5_2:70557299-70557318 Msa0785570:intron 50.0%
! GAAGTGAAGTGGCGGGAAAA+GGG - chr5_2:70557376-70557395 Msa0785570:CDS 50.0%
!! GGCATTGGCGAGGAATAGTT+CGG - chr5_2:70557443-70557462 Msa0785570:CDS 50.0%
TTCGGACAATGTTAGCGTGG+TGG - chr5_2:70557461-70557480 Msa0785570:CDS 50.0%
!! GCGTGGTGGTTGTTGATTTG+AGG - chr5_2:70557475-70557494 Msa0785570:CDS 50.0%
CCAGACACAGTACACGTCAT+AGG + chr5_2:70557594-70557613 None:intergenic 50.0%
CCTATGACGTGTACTGTGTC+TGG - chr5_2:70557591-70557610 Msa0785570:CDS 50.0%
CTGGGACACCTATGATTCGT+AGG - chr5_2:70557610-70557629 Msa0785570:CDS 50.0%
TGGCAAAGGTGGGAGGAAAA+TGG - chr5_2:70557642-70557661 Msa0785570:CDS 50.0%
CAAAGGTGGGAGGAAAATGG+TGG - chr5_2:70557645-70557664 Msa0785570:CDS 50.0%
AAGGTGGGAGGAAAATGGTG+GGG - chr5_2:70557647-70557666 Msa0785570:CDS 50.0%
!! GGCTGAGATTTGTTGTGGTG+TGG - chr5_2:70555686-70555705 Msa0785570:three_prime_UTR 50.0%
TAAATCCAAACTCCGGCGAC+CGG + chr5_2:70555763-70555782 None:intergenic 50.0%
! TGTCGTTTCCGGCTATTCTC+CGG + chr5_2:70555813-70555832 None:intergenic 50.0%
! TTTTCGCATTCTTGCGGTGG+CGG + chr5_2:70555867-70555886 None:intergenic 50.0%
! GTGTTTTCGCATTCTTGCGG+TGG + chr5_2:70555870-70555889 None:intergenic 50.0%
GGTTGACTGGAAGTCAACGA+TGG - chr5_2:70556270-70556289 Msa0785570:intron 50.0%
TGTTGTTGCCGTTGTTACGC+CGG - chr5_2:70556408-70556427 Msa0785570:intron 50.0%
GATCTTCTCCGGCGTAACAA+CGG + chr5_2:70556419-70556438 None:intergenic 50.0%
ATTCTCGAGCCGTTCTTTGC+CGG - chr5_2:70556458-70556477 Msa0785570:intron 50.0%
GAGGAATGGCAACACCATTC+CGG + chr5_2:70556480-70556499 None:intergenic 50.0%
GTGATCGGAGGAAAGAGGAA+TGG + chr5_2:70556494-70556513 None:intergenic 50.0%
TCCTCTTTCCTCCGATCACA+AGG - chr5_2:70556495-70556514 Msa0785570:intron 50.0%
ACCTTGTGATCGGAGGAAAG+AGG + chr5_2:70556499-70556518 None:intergenic 50.0%
! ATCGACCCGATGAGTTGGAT+CGG - chr5_2:70556605-70556624 Msa0785570:intron 50.0%
CTGGAGGACGTGTGATCTAT+TGG - chr5_2:70556638-70556657 Msa0785570:intron 50.0%
GGACGTGTGATCTATTGGGA+TGG - chr5_2:70556643-70556662 Msa0785570:intron 50.0%
!! TGCAAGAGTGCTTGGAGTGT+TGG - chr5_2:70556666-70556685 Msa0785570:intron 50.0%
GGAACCGGAGGTAACCATAA+CGG - chr5_2:70557218-70557237 Msa0785570:CDS 50.0%
CTCTCCGTTATGGTTACCTC+CGG + chr5_2:70557225-70557244 None:intergenic 50.0%
TGCAAAACGACACGGCATGT+AGG - chr5_2:70557298-70557317 Msa0785570:intron 50.0%
GCAAAACGACACGGCATGTA+GGG - chr5_2:70557299-70557318 Msa0785570:intron 50.0%
! GAAGTGAAGTGGCGGGAAAA+GGG - chr5_2:70557376-70557395 Msa0785570:CDS 50.0%
!! GGCATTGGCGAGGAATAGTT+CGG - chr5_2:70557443-70557462 Msa0785570:CDS 50.0%
TTCGGACAATGTTAGCGTGG+TGG - chr5_2:70557461-70557480 Msa0785570:CDS 50.0%
!! GCGTGGTGGTTGTTGATTTG+AGG - chr5_2:70557475-70557494 Msa0785570:CDS 50.0%
CCAGACACAGTACACGTCAT+AGG + chr5_2:70557594-70557613 None:intergenic 50.0%
CCTATGACGTGTACTGTGTC+TGG - chr5_2:70557591-70557610 Msa0785570:CDS 50.0%
CTGGGACACCTATGATTCGT+AGG - chr5_2:70557610-70557629 Msa0785570:CDS 50.0%
TGGCAAAGGTGGGAGGAAAA+TGG - chr5_2:70557642-70557661 Msa0785570:CDS 50.0%
CAAAGGTGGGAGGAAAATGG+TGG - chr5_2:70557645-70557664 Msa0785570:CDS 50.0%
AAGGTGGGAGGAAAATGGTG+GGG - chr5_2:70557647-70557666 Msa0785570:CDS 50.0%
CAGATCCACCGGAGAATAGC+CGG - chr5_2:70555802-70555821 Msa0785570:three_prime_UTR 55.0%
!! GGTGGTGGTGGTGAAAGAGA+TGG + chr5_2:70555846-70555865 None:intergenic 55.0%
TCCGGCTGCACAAACGGATA+CGG + chr5_2:70556586-70556605 None:intergenic 55.0%
TCCAACTCATCGGGTCGATC+CGG + chr5_2:70556604-70556623 None:intergenic 55.0%
!! TGGGATGGTGCAAGAGTGCT+TGG - chr5_2:70556658-70556677 Msa0785570:intron 55.0%
! CGGAGGTAACCATAACGGAG+AGG - chr5_2:70557223-70557242 Msa0785570:CDS 55.0%
CTCGTCACTCCTCTCCGTTA+TGG + chr5_2:70557235-70557254 None:intergenic 55.0%
! CATAACGGAGAGGAGTGACG+AGG - chr5_2:70557233-70557252 Msa0785570:CDS 55.0%
CACGTCCCATAAGCCATCAC+TGG + chr5_2:70557277-70557296 None:intergenic 55.0%
CAGTGATGGCTTATGGGACG+TGG - chr5_2:70557275-70557294 Msa0785570:intron 55.0%
GGACGTGGTGCAAAACGACA+CGG - chr5_2:70557290-70557309 Msa0785570:intron 55.0%
AAACGACACGGCATGTAGGG+TGG - chr5_2:70557302-70557321 Msa0785570:intron 55.0%
GGTGGTGCAGATGTGTCTCA+AGG - chr5_2:70557320-70557339 Msa0785570:intron 55.0%
GGTGCAGATGTGTCTCAAGG+CGG - chr5_2:70557323-70557342 Msa0785570:intron 55.0%
AGATGTGTCTCAAGGCGGAG+AGG - chr5_2:70557328-70557347 Msa0785570:intron 55.0%
TTTCCCGCCACTTCACTTCC+CGG + chr5_2:70557375-70557394 None:intergenic 55.0%
! GGAAGTGAAGTGGCGGGAAA+AGG - chr5_2:70557375-70557394 Msa0785570:CDS 55.0%
GGCGGGAAAAGGGTCAGATA+AGG - chr5_2:70557386-70557405 Msa0785570:CDS 55.0%
!! TGACGAAGTTGGCATTGGCG+AGG - chr5_2:70557433-70557452 Msa0785570:CDS 55.0%
CAGATCCACCGGAGAATAGC+CGG - chr5_2:70555802-70555821 Msa0785570:three_prime_UTR 55.0%
!! GGTGGTGGTGGTGAAAGAGA+TGG + chr5_2:70555846-70555865 None:intergenic 55.0%
TCCGGCTGCACAAACGGATA+CGG + chr5_2:70556586-70556605 None:intergenic 55.0%
TCCAACTCATCGGGTCGATC+CGG + chr5_2:70556604-70556623 None:intergenic 55.0%
!! TGGGATGGTGCAAGAGTGCT+TGG - chr5_2:70556658-70556677 Msa0785570:intron 55.0%
! CGGAGGTAACCATAACGGAG+AGG - chr5_2:70557223-70557242 Msa0785570:CDS 55.0%
CTCGTCACTCCTCTCCGTTA+TGG + chr5_2:70557235-70557254 None:intergenic 55.0%
! CATAACGGAGAGGAGTGACG+AGG - chr5_2:70557233-70557252 Msa0785570:CDS 55.0%
CACGTCCCATAAGCCATCAC+TGG + chr5_2:70557277-70557296 None:intergenic 55.0%
CAGTGATGGCTTATGGGACG+TGG - chr5_2:70557275-70557294 Msa0785570:intron 55.0%
GGACGTGGTGCAAAACGACA+CGG - chr5_2:70557290-70557309 Msa0785570:intron 55.0%
AAACGACACGGCATGTAGGG+TGG - chr5_2:70557302-70557321 Msa0785570:intron 55.0%
GGTGGTGCAGATGTGTCTCA+AGG - chr5_2:70557320-70557339 Msa0785570:intron 55.0%
GGTGCAGATGTGTCTCAAGG+CGG - chr5_2:70557323-70557342 Msa0785570:intron 55.0%
AGATGTGTCTCAAGGCGGAG+AGG - chr5_2:70557328-70557347 Msa0785570:intron 55.0%
TTTCCCGCCACTTCACTTCC+CGG + chr5_2:70557375-70557394 None:intergenic 55.0%
! GGAAGTGAAGTGGCGGGAAA+AGG - chr5_2:70557375-70557394 Msa0785570:CDS 55.0%
GGCGGGAAAAGGGTCAGATA+AGG - chr5_2:70557386-70557405 Msa0785570:CDS 55.0%
!! TGACGAAGTTGGCATTGGCG+AGG - chr5_2:70557433-70557452 Msa0785570:CDS 55.0%
GGTCGTGAGCTTGGCTCAAC+TGG + chr5_2:70555738-70555757 None:intergenic 60.0%
GAGCCAAGCTCACGACCTTC+CGG - chr5_2:70555741-70555760 Msa0785570:three_prime_UTR 60.0%
CGTTTCCGGCTATTCTCCGG+TGG + chr5_2:70555810-70555829 None:intergenic 60.0%
CGAGCCGTTCTTTGCCGGAA+TGG - chr5_2:70556463-70556482 Msa0785570:intron 60.0%
CCGGCTGCACAAACGGATAC+GGG + chr5_2:70556585-70556604 None:intergenic 60.0%
CCCGTATCCGTTTGTGCAGC+CGG - chr5_2:70556582-70556601 Msa0785570:intron 60.0%
GGTCGATCCGGCTGCACAAA+CGG + chr5_2:70556592-70556611 None:intergenic 60.0%
GTGTCTCAAGGCGGAGAGGA+CGG - chr5_2:70557332-70557351 Msa0785570:intron 60.0%
ACTTCACTTCCCGGAGACCC+CGG + chr5_2:70557366-70557385 None:intergenic 60.0%
GTCTCCGGGAAGTGAAGTGG+CGG - chr5_2:70557368-70557387 Msa0785570:CDS 60.0%
TCTCCGGGAAGTGAAGTGGC+GGG - chr5_2:70557369-70557388 Msa0785570:CDS 60.0%
GGTCGTGAGCTTGGCTCAAC+TGG + chr5_2:70555738-70555757 None:intergenic 60.0%
GAGCCAAGCTCACGACCTTC+CGG - chr5_2:70555741-70555760 Msa0785570:three_prime_UTR 60.0%
CGTTTCCGGCTATTCTCCGG+TGG + chr5_2:70555810-70555829 None:intergenic 60.0%
CGAGCCGTTCTTTGCCGGAA+TGG - chr5_2:70556463-70556482 Msa0785570:intron 60.0%
CCGGCTGCACAAACGGATAC+GGG + chr5_2:70556585-70556604 None:intergenic 60.0%
CCCGTATCCGTTTGTGCAGC+CGG - chr5_2:70556582-70556601 Msa0785570:intron 60.0%
GGTCGATCCGGCTGCACAAA+CGG + chr5_2:70556592-70556611 None:intergenic 60.0%
GTGTCTCAAGGCGGAGAGGA+CGG - chr5_2:70557332-70557351 Msa0785570:intron 60.0%
ACTTCACTTCCCGGAGACCC+CGG + chr5_2:70557366-70557385 None:intergenic 60.0%
GTCTCCGGGAAGTGAAGTGG+CGG - chr5_2:70557368-70557387 Msa0785570:CDS 60.0%
TCTCCGGGAAGTGAAGTGGC+GGG - chr5_2:70557369-70557388 Msa0785570:CDS 60.0%
CGACCGGAAGGTCGTGAGCT+TGG + chr5_2:70555747-70555766 None:intergenic 65.0%
ACCTTCCGGTCGCCGGAGTT+TGG - chr5_2:70555755-70555774 Msa0785570:three_prime_UTR 65.0%
TCCAAACTCCGGCGACCGGA+AGG + chr5_2:70555759-70555778 None:intergenic 65.0%
! CATTCTTGCGGTGGCGGTGG+TGG + chr5_2:70555861-70555880 None:intergenic 65.0%
! TCGCATTCTTGCGGTGGCGG+TGG + chr5_2:70555864-70555883 None:intergenic 65.0%
GCCGGATCGACCCGATGAGT+TGG - chr5_2:70556600-70556619 Msa0785570:intron 65.0%
GGGGTCTCCGGGAAGTGAAG+TGG - chr5_2:70557365-70557384 Msa0785570:CDS 65.0%
CGACCGGAAGGTCGTGAGCT+TGG + chr5_2:70555747-70555766 None:intergenic 65.0%
ACCTTCCGGTCGCCGGAGTT+TGG - chr5_2:70555755-70555774 Msa0785570:three_prime_UTR 65.0%
TCCAAACTCCGGCGACCGGA+AGG + chr5_2:70555759-70555778 None:intergenic 65.0%
! CATTCTTGCGGTGGCGGTGG+TGG + chr5_2:70555861-70555880 None:intergenic 65.0%
! TCGCATTCTTGCGGTGGCGG+TGG + chr5_2:70555864-70555883 None:intergenic 65.0%
GCCGGATCGACCCGATGAGT+TGG - chr5_2:70556600-70556619 Msa0785570:intron 65.0%
GGGGTCTCCGGGAAGTGAAG+TGG - chr5_2:70557365-70557384 Msa0785570:CDS 65.0%
GCTCACGACCTTCCGGTCGC+CGG - chr5_2:70555748-70555767 Msa0785570:three_prime_UTR 70.0%
! TCTTGCGGTGGCGGTGGTGG+TGG + chr5_2:70555858-70555877 None:intergenic 70.0%
GGAGAGGACGGTGACTCCGC+CGG - chr5_2:70557344-70557363 Msa0785570:intron 70.0%
GAGAGGACGGTGACTCCGCC+GGG - chr5_2:70557345-70557364 Msa0785570:intron 70.0%
AGAGGACGGTGACTCCGCCG+GGG - chr5_2:70557346-70557365 Msa0785570:intron 70.0%
TCACTTCCCGGAGACCCCGG+CGG + chr5_2:70557363-70557382 None:intergenic 70.0%
GCTCACGACCTTCCGGTCGC+CGG - chr5_2:70555748-70555767 Msa0785570:three_prime_UTR 70.0%
! TCTTGCGGTGGCGGTGGTGG+TGG + chr5_2:70555858-70555877 None:intergenic 70.0%
GGAGAGGACGGTGACTCCGC+CGG - chr5_2:70557344-70557363 Msa0785570:intron 70.0%
GAGAGGACGGTGACTCCGCC+GGG - chr5_2:70557345-70557364 Msa0785570:intron 70.0%
AGAGGACGGTGACTCCGCCG+GGG - chr5_2:70557346-70557365 Msa0785570:intron 70.0%
TCACTTCCCGGAGACCCCGG+CGG + chr5_2:70557363-70557382 None:intergenic 70.0%
GGTGACTCCGCCGGGGTCTC+CGG - chr5_2:70557353-70557372 Msa0785570:intron 75.0%
GTGACTCCGCCGGGGTCTCC+GGG - chr5_2:70557354-70557373 Msa0785570:intron 75.0%
GGTGACTCCGCCGGGGTCTC+CGG - chr5_2:70557353-70557372 Msa0785570:intron 75.0%
GTGACTCCGCCGGGGTCTCC+GGG - chr5_2:70557354-70557373 Msa0785570:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 70555530 70557945 70555530 ID=Msa0785570;Name=Msa0785570
chr5_2 mRNA 70555530 70557945 70555530 ID=Msa0785570-mRNA-1;Parent=Msa0785570;Name=Msa0785570-mRNA-1;_AED=0.14;_eAED=0.14;_QI=154|1|1|1|1|1|4|427|393
chr5_2 exon 70555530 70556288 70555530 ID=Msa0785570-mRNA-1:exon:21314;Parent=Msa0785570-mRNA-1
chr5_2 exon 70556769 70556874 70556769 ID=Msa0785570-mRNA-1:exon:21313;Parent=Msa0785570-mRNA-1
chr5_2 exon 70556959 70557273 70556959 ID=Msa0785570-mRNA-1:exon:21312;Parent=Msa0785570-mRNA-1
chr5_2 exon 70557363 70557945 70557363 ID=Msa0785570-mRNA-1:exon:21311;Parent=Msa0785570-mRNA-1
chr5_2 five_prime_UTR 70557792 70557945 70557792 ID=Msa0785570-mRNA-1:five_prime_utr;Parent=Msa0785570-mRNA-1
chr5_2 CDS 70557363 70557791 70557363 ID=Msa0785570-mRNA-1:cds;Parent=Msa0785570-mRNA-1
chr5_2 CDS 70556959 70557273 70556959 ID=Msa0785570-mRNA-1:cds;Parent=Msa0785570-mRNA-1
chr5_2 CDS 70556769 70556874 70556769 ID=Msa0785570-mRNA-1:cds;Parent=Msa0785570-mRNA-1
chr5_2 CDS 70555957 70556288 70555957 ID=Msa0785570-mRNA-1:cds;Parent=Msa0785570-mRNA-1
chr5_2 three_prime_UTR 70555530 70555956 70555530 ID=Msa0785570-mRNA-1:three_prime_utr;Parent=Msa0785570-mRNA-1
Gene Sequence

>Msa0785570

ATGGCTGAGATTTGTTGTGGTGTGGTCGGAGAAGAAGAAACTCTTACTCTACCAGTTGAGCCAAGCTCACGACCTTCCGGTCGCCGGAGTTTGGATTTACTACCGTTGAAATACATGGCAGATCCACCGGAGAATAGCCGGAAACGACAGAAGCTAGATCCATCTCTTTCACCACCACCACCGCCACCGCAAGAATGCGAAAACACAGTTGATAGCTGTGAATCAAGTACTGATGAAGAATCAAAGGAAAACGAAGTTGTTTTGAAAAACAAAGTTGTTGTTGTTGAAGATTGTTCTCCTAAATATGGAATAACATCAGTTTGTGGAAGAAGAAAAGAAATGGAAGACGCTGTTTCTGTTCATAAATCTTTTTGTAGCGAAAAACAAGATCATTTCTTCGGTGTTTACGATGGTCATGGTTGTTCACATGTTGCGACTATGTGTAAAGAAAGGTTGCATGAAATTGTTGAAGAAGAAAGAGAAAGAGAGAAAGAGAAGGTTGACTGGAAGTCAACGATGGAGAAGAGTTTTATTAGAATGGATGAAGAGGTGTTGAATTCTAGTATGACGAAACAGAGCTTCAGTTGTAAGTGTGAGCTTCAAACTCCTCATTGTGATGCTGTTGGTTCTACTGCTGTTGTTGCCGTTGTTACGCCGGAGAAGATCATTGTTTCGAATTGTGGTGATTCTCGAGCCGTTCTTTGCCGGAATGGTGTTGCCATTCCTCTTTCCTCCGATCACAAGCCGGATCGACCCGATGAGTTGGATCGGATTAATAAAGCTGGAGGACGTGTGATCTATTGGGATGGTGCAAGAGTGCTTGGAGTGTTGGCCATGTCAAGAGCTATTGGGGACAATTACTTGAAGCCATATGTTATATCGGAACCGGAGGTAACCATAACGGAGAGGAGTGACGAGGATGAATGTCTGATACTTGCCAGTGATGGCTTATGGGACGTGGTGCAAAACGACACGGCATGTAGGGTGGTGCAGATGTGTCTCAAGGCGGAGAGGACGGTGACTCCGCCGGGGTCTCCGGGAAGTGAAGTGGCGGGAAAAGGGTCAGATAAGGCGTGTTCCGATGCCTCAATTTTGTTGACGAAGTTGGCATTGGCGAGGAATAGTTCGGACAATGTTAGCGTGGTGGTTGTTGATTTGAGGAGAGATCAACGTCAACAATAA
Protein sequence

>Msa0785570

MAEICCGVVGEEETLTLPVEPSSRPSGRRSLDLLPLKYMADPPENSRKRQKLDPSLSPPPPPPQECENTVDSCESSTDEESKENEVVLKNKVVVVEDCSPKYGITSVCGRRKEMEDAVSVHKSFCSEKQDHFFGVYDGHGCSHVATMCKERLHEIVEEEREREKEKVDWKSTMEKSFIRMDEEVLNSSMTKQSFSCKCELQTPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELDRINKAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTITERSDEDECLILASDGLWDVVQNDTACRVVQMCLKAERTVTPPGSPGSEVAGKGSDKACSDASILLTKLALARNSSDNVSVVVVDLRRDQRQQ*