Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731000 | PIN20061.1 | 61.695 | 295 | 76 | 4 | 25 | 314 | 23 | 285 | 1.43e-118 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731000 | sp|Q6IDL4|P24D3_ARATH | 61.047 | 172 | 63 | 2 | 147 | 314 | 46 | 217 | 4.40e-70 | 219 |
| Msa0731000 | sp|Q6IDL4|P24D3_ARATH | 59.172 | 169 | 66 | 2 | 8 | 173 | 10 | 178 | 2.87e-67 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731000 | A0A2G9HRB3 | 61.695 | 295 | 76 | 4 | 25 | 314 | 23 | 285 | 6.85e-119 | 353 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0731000 | Msa0808840 | 0.909619 | 4.662365e-82 | -8.615850e-47 |
| Msa0174000 | Msa0731000 | 0.800772 | 1.232291e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731000 | MtrunA17_Chr5g0423921 | 80.000 | 210 | 42 | 0 | 1 | 210 | 1 | 210 | 2.21e-103 | 301 |
| Msa0731000 | MtrunA17_Chr5g0423921 | 88.415 | 164 | 18 | 1 | 152 | 314 | 49 | 212 | 3.66e-101 | 295 |
| Msa0731000 | MtrunA17_Chr3g0114751 | 70.286 | 175 | 44 | 4 | 5 | 173 | 6 | 178 | 1.63e-81 | 246 |
| Msa0731000 | MtrunA17_Chr3g0114751 | 79.167 | 144 | 29 | 1 | 171 | 314 | 75 | 217 | 2.16e-78 | 238 |
| Msa0731000 | MtrunA17_Chr2g0277981 | 61.111 | 180 | 67 | 2 | 138 | 314 | 27 | 206 | 2.53e-76 | 232 |
| Msa0731000 | MtrunA17_Chr2g0277981 | 65.031 | 163 | 55 | 2 | 13 | 173 | 5 | 167 | 3.08e-70 | 217 |
| Msa0731000 | MtrunA17_Chr8g0380801 | 71.724 | 145 | 40 | 1 | 171 | 314 | 67 | 211 | 3.07e-72 | 222 |
| Msa0731000 | MtrunA17_Chr8g0380801 | 63.743 | 171 | 57 | 3 | 8 | 173 | 2 | 172 | 4.23e-61 | 193 |
| Msa0731000 | MtrunA17_Chr8g0380821 | 71.171 | 111 | 31 | 1 | 205 | 314 | 2 | 112 | 1.90e-49 | 160 |
| Msa0731000 | MtrunA17_Chr8g0380821 | 63.291 | 79 | 28 | 1 | 103 | 180 | 2 | 80 | 2.09e-24 | 95.5 |
| Msa0731000 | MtrunA17_Chr4g0042721 | 47.222 | 144 | 76 | 0 | 171 | 314 | 73 | 216 | 3.45e-48 | 160 |
| Msa0731000 | MtrunA17_Chr4g0042721 | 41.615 | 161 | 88 | 2 | 26 | 180 | 24 | 184 | 3.33e-41 | 142 |
| Msa0731000 | MtrunA17_Chr6g0453521 | 41.379 | 145 | 84 | 1 | 171 | 314 | 68 | 212 | 5.08e-41 | 142 |
| Msa0731000 | MtrunA17_Chr6g0453521 | 39.216 | 153 | 86 | 3 | 28 | 173 | 21 | 173 | 1.84e-34 | 125 |
| Msa0731000 | MtrunA17_Chr7g0217911 | 39.583 | 144 | 87 | 0 | 171 | 314 | 5 | 148 | 3.79e-39 | 135 |
| Msa0731000 | MtrunA17_Chr7g0217911 | 40.385 | 104 | 62 | 0 | 69 | 172 | 5 | 108 | 3.46e-26 | 101 |
| Msa0731000 | MtrunA17_Chr5g0417891 | 36.986 | 146 | 90 | 2 | 171 | 314 | 74 | 219 | 2.19e-31 | 117 |
| Msa0731000 | MtrunA17_Chr5g0417891 | 33.140 | 172 | 106 | 5 | 12 | 174 | 10 | 181 | 2.20e-25 | 101 |
| Msa0731000 | MtrunA17_Chr5g0417901 | 37.255 | 153 | 95 | 1 | 163 | 314 | 62 | 214 | 1.29e-30 | 115 |
| Msa0731000 | MtrunA17_Chr5g0417901 | 31.429 | 175 | 118 | 2 | 1 | 173 | 1 | 175 | 3.33e-27 | 105 |
| Msa0731000 | MtrunA17_Chr5g0417931 | 38.060 | 134 | 83 | 0 | 181 | 314 | 90 | 223 | 5.92e-25 | 100 |
| Msa0731000 | MtrunA17_Chr5g0417931 | 32.558 | 172 | 106 | 5 | 12 | 173 | 13 | 184 | 5.70e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731000 | AT1G09580.1 | 61.047 | 172 | 63 | 2 | 147 | 314 | 46 | 217 | 4.47e-71 | 219 |
| Msa0731000 | AT1G09580.1 | 59.172 | 169 | 66 | 2 | 8 | 173 | 10 | 178 | 2.92e-68 | 212 |
| Msa0731000 | AT1G21900.1 | 65.772 | 149 | 50 | 1 | 167 | 314 | 68 | 216 | 1.31e-68 | 213 |
| Msa0731000 | AT1G21900.1 | 56.497 | 177 | 68 | 4 | 2 | 173 | 5 | 177 | 7.74e-65 | 204 |
| Msa0731000 | AT1G57620.1 | 58.721 | 172 | 67 | 2 | 147 | 314 | 41 | 212 | 3.15e-67 | 209 |
| Msa0731000 | AT1G57620.1 | 54.857 | 175 | 76 | 2 | 9 | 180 | 6 | 180 | 3.58e-62 | 196 |
| Msa0731000 | AT3G10780.1 | 56.081 | 148 | 61 | 1 | 171 | 314 | 70 | 217 | 2.80e-48 | 161 |
| Msa0731000 | AT3G10780.1 | 44.162 | 197 | 103 | 2 | 21 | 210 | 19 | 215 | 8.75e-48 | 160 |
| Msa0731000 | AT1G26690.1 | 43.750 | 144 | 81 | 0 | 171 | 314 | 71 | 214 | 1.03e-43 | 149 |
| Msa0731000 | AT1G26690.1 | 39.645 | 169 | 91 | 2 | 15 | 172 | 6 | 174 | 4.89e-39 | 137 |
| Msa0731000 | AT1G14010.1 | 43.750 | 144 | 81 | 0 | 171 | 314 | 69 | 212 | 3.11e-43 | 148 |
| Msa0731000 | AT1G14010.1 | 36.970 | 165 | 98 | 2 | 14 | 172 | 8 | 172 | 4.36e-34 | 124 |
| Msa0731000 | AT1G69460.1 | 43.056 | 144 | 82 | 0 | 171 | 314 | 71 | 214 | 3.69e-42 | 145 |
| Msa0731000 | AT1G69460.1 | 38.462 | 169 | 95 | 3 | 11 | 173 | 10 | 175 | 3.63e-35 | 127 |
| Msa0731000 | AT2G03290.1 | 40.523 | 153 | 91 | 0 | 162 | 314 | 61 | 213 | 7.62e-40 | 139 |
| Msa0731000 | AT2G03290.1 | 35.256 | 156 | 94 | 1 | 25 | 173 | 19 | 174 | 4.38e-30 | 114 |
| Msa0731000 | AT3G29070.1 | 40.559 | 143 | 85 | 0 | 172 | 314 | 83 | 225 | 8.13e-37 | 132 |
| Msa0731000 | AT3G29070.1 | 37.662 | 154 | 90 | 2 | 25 | 172 | 32 | 185 | 5.86e-33 | 121 |
| Msa0731000 | AT2G03040.1 | 35.811 | 148 | 88 | 1 | 25 | 165 | 19 | 166 | 3.29e-29 | 110 |
| Msa0731000 | AT2G03040.1 | 37.736 | 106 | 66 | 0 | 162 | 267 | 61 | 166 | 3.65e-22 | 91.7 |
| Msa0731000 | AT3G22845.1 | 29.496 | 139 | 94 | 2 | 172 | 310 | 73 | 207 | 6.11e-11 | 61.6 |
Find 90 sgRNAs with CRISPR-Local
Find 784 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGAATGCTTACGGACTTT+TGG | 0.251684 | 5_1:+40965273 | Msa0731000:three_prime_UTR |
| GGAACAGGGTTTGGGTTTCT+TGG | 0.278183 | 5_1:-40955799 | None:intergenic |
| TCGATGTGAGTGCCTCTTCT+TGG | 0.284936 | 5_1:-40965238 | None:intergenic |
| TGTGTAGCAGGAAGTTTCTT+TGG | 0.290728 | 5_1:-40965601 | None:intergenic |
| GAAATTATGTGGCATGCTTT+TGG | 0.304500 | 5_1:+40959148 | Msa0731000:CDS |
| GAAATTATGTGGCATGCTTT+TGG | 0.304500 | 5_1:+40964034 | Msa0731000:CDS |
| TTTATGAGGGAACAGGGTTT+GGG | 0.307947 | 5_1:-40955807 | None:intergenic |
| GTCAGCCTTGATTGGAAAAC+TGG | 0.328485 | 5_1:+40959204 | Msa0731000:CDS |
| GTCAGCCTTGATTGGAAAAC+TGG | 0.328485 | 5_1:+40964090 | Msa0731000:CDS |
| GAAACTTCCTGCTACACATT+TGG | 0.333338 | 5_1:+40965606 | Msa0731000:three_prime_UTR |
| TTGCAGGTAACATCTCCTTT+TGG | 0.356646 | 5_1:+40959060 | Msa0731000:intron |
| TTGCAGGTAACATCTCCTTT+TGG | 0.356646 | 5_1:+40963946 | Msa0731000:intron |
| GAACAGGGTTTGGGTTTCTT+GGG | 0.357699 | 5_1:-40955798 | None:intergenic |
| CGATTATCTAATTTATTTGA+AGG | 0.366207 | 5_1:+40959434 | Msa0731000:CDS |
| CGATTATCTAATTTATTTGA+AGG | 0.366207 | 5_1:+40964319 | Msa0731000:CDS |
| TTTGGGTTTCTTGGGAGGGT+AGG | 0.370173 | 5_1:-40955790 | None:intergenic |
| AAGAGGCACTCACATCGATT+AGG | 0.379215 | 5_1:+40965243 | Msa0731000:three_prime_UTR |
| TACATATTTCACACCCTTCA+CGG | 0.388325 | 5_1:-40965324 | None:intergenic |
| TAGTTTCTGGATTGCAACTT+TGG | 0.395311 | 5_1:+40965069 | Msa0731000:CDS |
| TGGTTGACTCTTCCAAGTTC+AGG | 0.395335 | 5_1:+40956014 | Msa0731000:CDS |
| TGGAATTTCAGCAAAGGATT+GGG | 0.395382 | 5_1:+40959224 | Msa0731000:CDS |
| TGGAATTTCAGCAAAGGATT+GGG | 0.395382 | 5_1:+40964110 | Msa0731000:CDS |
| CAGGGTTTGGGTTTCTTGGG+AGG | 0.403415 | 5_1:-40955795 | None:intergenic |
| CTGGAATTTCAGCAAAGGAT+TGG | 0.405549 | 5_1:+40959223 | Msa0731000:CDS |
| CTGGAATTTCAGCAAAGGAT+TGG | 0.405549 | 5_1:+40964109 | Msa0731000:CDS |
| AGGGTGTTGAACTTGAAATC+AGG | 0.420862 | 5_1:+40959382 | Msa0731000:intron |
| AGGGTGTTGAACTTGAAATC+AGG | 0.420862 | 5_1:+40964267 | Msa0731000:intron |
| GTGTAGCAGGAAGTTTCTTT+GGG | 0.421942 | 5_1:-40965600 | None:intergenic |
| ATTTGGAATGCTTTGATAGC+AGG | 0.427948 | 5_1:+40965623 | Msa0731000:three_prime_UTR |
| CTGACACTTACACTACCTTC+AGG | 0.429753 | 5_1:-40959186 | None:intergenic |
| CTGACACTTACACTACCTTC+AGG | 0.429753 | 5_1:-40964072 | None:intergenic |
| AGAGGCACTCACATCGATTA+GGG | 0.435906 | 5_1:+40965244 | Msa0731000:three_prime_UTR |
| ACACATTTAGTTCCTGAACT+TGG | 0.448372 | 5_1:-40956026 | None:intergenic |
| AGTGAGAGCACCAAAATGAT+AGG | 0.455920 | 5_1:-40965541 | None:intergenic |
| TGATGAACGTTGTTTCCAAA+AGG | 0.464734 | 5_1:-40959075 | None:intergenic |
| TGATGAACGTTGTTTCCAAA+AGG | 0.464734 | 5_1:-40963961 | None:intergenic |
| CAGGAAGCTCGAAGGAATAG+TGG | 0.469265 | 5_1:+40964286 | Msa0731000:CDS |
| TTGATAAATTAAGTTTGTGT+TGG | 0.470583 | 5_1:-40955767 | None:intergenic |
| GTGTAAGTGTCAGCCTTGAT+TGG | 0.480040 | 5_1:+40959196 | Msa0731000:CDS |
| GTGTAAGTGTCAGCCTTGAT+TGG | 0.480040 | 5_1:+40964082 | Msa0731000:CDS |
| TATAGAGCAGCTATGACAAC+TGG | 0.487758 | 5_1:+40965432 | Msa0731000:three_prime_UTR |
| AAGCATTCCAAATGTGTAGC+AGG | 0.488770 | 5_1:-40965613 | None:intergenic |
| TTTAGAAGTTTAAGGAGTAT+GGG | 0.488985 | 5_1:-40965650 | None:intergenic |
| GAGAATCTAGTTGAGGCAAA+AGG | 0.493384 | 5_1:+40965184 | Msa0731000:three_prime_UTR |
| AAGTCCGTAAGCATTCTGTT+AGG | 0.502865 | 5_1:-40965269 | None:intergenic |
| TGGTTTAGTATCATGTCCCT+TGG | 0.503070 | 5_1:+40965035 | Msa0731000:CDS |
| TACTATGTTGTAACTGATGA+AGG | 0.503160 | 5_1:+40956089 | Msa0731000:CDS |
| GATTAGGGAACATACCTTTG+TGG | 0.508795 | 5_1:-40956126 | None:intergenic |
| AAACAAATGCTCGAGTCGCT+TGG | 0.510777 | 5_1:+40965015 | Msa0731000:CDS |
| TGCCACATAATTTCCACTCT+CGG | 0.522318 | 5_1:-40959139 | None:intergenic |
| TGCCACATAATTTCCACTCT+CGG | 0.522318 | 5_1:-40964025 | None:intergenic |
| ACATATGGCTTGAGCCGTGA+AGG | 0.527506 | 5_1:+40965310 | Msa0731000:three_prime_UTR |
| AGTTGAGGCAAAAGGAAACT+TGG | 0.530434 | 5_1:+40965192 | Msa0731000:three_prime_UTR |
| GGCGCCTAACAGAATGCTTA+CGG | 0.534420 | 5_1:+40965265 | Msa0731000:three_prime_UTR |
| AGGGTTTGGGTTTCTTGGGA+GGG | 0.542134 | 5_1:-40955794 | None:intergenic |
| AAACTAAAACGCAGAGACCA+AGG | 0.543213 | 5_1:-40965052 | None:intergenic |
| GAAAACTGGAATTTCAGCAA+AGG | 0.546642 | 5_1:+40959218 | Msa0731000:CDS |
| GAAAACTGGAATTTCAGCAA+AGG | 0.546642 | 5_1:+40964104 | Msa0731000:CDS |
| GCATTTACAACTACCGAGAG+TGG | 0.562957 | 5_1:+40959126 | Msa0731000:CDS |
| GCATTTACAACTACCGAGAG+TGG | 0.562957 | 5_1:+40964012 | Msa0731000:CDS |
| TGACACTTACACTACCTTCA+GGG | 0.571234 | 5_1:-40959185 | None:intergenic |
| TGACACTTACACTACCTTCA+GGG | 0.571234 | 5_1:-40964071 | None:intergenic |
| TTTGGAATGCTTTGATAGCA+GGG | 0.574268 | 5_1:+40965624 | Msa0731000:three_prime_UTR |
| TCAAATAAATTAGATAATCG+TGG | 0.574741 | 5_1:-40959431 | None:intergenic |
| TCAAATAAATTAGATAATCG+TGG | 0.574741 | 5_1:-40964316 | None:intergenic |
| ATAAATTAGATAATCGTGGA+TGG | 0.583572 | 5_1:-40959427 | None:intergenic |
| ATAAATTAGATAATCGTGGA+TGG | 0.583572 | 5_1:-40964312 | None:intergenic |
| AAAATCTTGTAGTATTCAAG+TGG | 0.585303 | 5_1:-40965480 | None:intergenic |
| TACCGAGAGTGGAAATTATG+TGG | 0.589093 | 5_1:+40959137 | Msa0731000:CDS |
| TACCGAGAGTGGAAATTATG+TGG | 0.589093 | 5_1:+40964023 | Msa0731000:CDS |
| AACTAAAACGCAGAGACCAA+GGG | 0.592971 | 5_1:-40965051 | None:intergenic |
| AGGAACTAAATGTGTGTCTG+AGG | 0.602454 | 5_1:+40956034 | Msa0731000:CDS |
| CATATGGCTTGAGCCGTGAA+GGG | 0.607995 | 5_1:+40965311 | Msa0731000:three_prime_UTR |
| CAAGCAATGAAGTTAAGCGA+TGG | 0.616267 | 5_1:+40955921 | Msa0731000:exon |
| ACAAACAAGAAACCAAGAAG+AGG | 0.620782 | 5_1:+40965226 | Msa0731000:three_prime_UTR |
| CTTGAAATCAGGAAGCTCGA+AGG | 0.630601 | 5_1:+40959393 | Msa0731000:CDS |
| CTTGAAATCAGGAAGCTCGA+AGG | 0.630601 | 5_1:+40964278 | Msa0731000:CDS |
| TTGGAATGCTTTGATAGCAG+GGG | 0.633139 | 5_1:+40965625 | Msa0731000:three_prime_UTR |
| CATAATGAAAATGTTACACA+AGG | 0.634420 | 5_1:+40959096 | Msa0731000:CDS |
| CATAATGAAAATGTTACACA+AGG | 0.634420 | 5_1:+40963982 | Msa0731000:CDS |
| TGCAAAGAAAGAAAAGATTG+AGG | 0.640940 | 5_1:+40959254 | Msa0731000:CDS |
| TGCAAAGAAAGAAAAGATTG+AGG | 0.640940 | 5_1:+40964140 | Msa0731000:CDS |
| GCTACAGGGAAGCAACAATG+AGG | 0.645196 | 5_1:+40960106 | Msa0731000:intron |
| GCTACAGGGAAGCAACGATG+AGG | 0.655281 | 5_1:+40964979 | Msa0731000:intron |
| CTACAGGGAAGCAACGATGA+GGG | 0.656889 | 5_1:+40964980 | Msa0731000:intron |
| CTACAGGGAAGCAACAATGA+GGG | 0.659995 | 5_1:+40960107 | Msa0731000:intron |
| TCTTCACACTATTTCCACAA+AGG | 0.664764 | 5_1:+40956112 | Msa0731000:CDS |
| ATGGAAGGAAAACACCCTGA+AGG | 0.665157 | 5_1:+40959171 | Msa0731000:CDS |
| ATGGAAGGAAAACACCCTGA+AGG | 0.665157 | 5_1:+40964057 | Msa0731000:CDS |
| TGAGGATATTCAAACACATG+TGG | 0.731163 | 5_1:+40956052 | Msa0731000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr5_1:40961081-40961100 | Msa0731000:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr5_1:40961080-40961099 | Msa0731000:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr5_1:40961081-40961100 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr5_1:40961080-40961099 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr5_1:40961080-40961099 | Msa0731000:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr5_1:40961081-40961100 | Msa0731000:intron | 0.0% |
| !!! | TGATATTTTTCAATTTTTAA+TGG | + | chr5_1:40958006-40958025 | Msa0731000:intron | 10.0% |
| !! | ATATTAATATTCATCAAATT+CGG | + | chr5_1:40958885-40958904 | Msa0731000:intron | 10.0% |
| !!! | TTTAAAATCACATATATAAT+TGG | + | chr5_1:40958925-40958944 | Msa0731000:intron | 10.0% |
| !!! | CAATTAAATTGATAATTTAA+TGG | + | chr5_1:40958999-40959018 | Msa0731000:intron | 10.0% |
| !!! | TATTTAATTTATATTTTTGC+AGG | + | chr5_1:40959044-40959063 | Msa0731000:intron | 10.0% |
| !!! | TGATATTTTTCAATTTTTAA+TGG | + | chr5_1:40958006-40958025 | Msa0731000:intron | 10.0% |
| !! | ATATTAATATTCATCAAATT+CGG | + | chr5_1:40958885-40958904 | Msa0731000:intron | 10.0% |
| !!! | TTTAAAATCACATATATAAT+TGG | + | chr5_1:40958925-40958944 | Msa0731000:intron | 10.0% |
| !!! | CAATTAAATTGATAATTTAA+TGG | + | chr5_1:40958999-40959018 | Msa0731000:intron | 10.0% |
| !!! | TATTTAATTTATATTTTTGC+AGG | + | chr5_1:40959044-40959063 | Msa0731000:intron | 10.0% |
| !! | AACATAAATTGTTATGTTAA+TGG | + | chr5_1:40957950-40957969 | Msa0731000:intron | 15.0% |
| !!! | TTTTGTTTGTTGAAATTATA+TGG | + | chr5_1:40958088-40958107 | Msa0731000:intron | 15.0% |
| !!! | TTTGTTTGTTGAAATTATAT+GGG | + | chr5_1:40958089-40958108 | Msa0731000:intron | 15.0% |
| !!! | ACATAAAACATTTAAAATTG+TGG | - | chr5_1:40958179-40958198 | None:intergenic | 15.0% |
| !!! | TAAATGTTTTATGTTAATCT+TGG | + | chr5_1:40958185-40958204 | Msa0731000:intron | 15.0% |
| !! | ATGTACATTCTATAATTTAA+AGG | + | chr5_1:40958288-40958307 | Msa0731000:intron | 15.0% |
| !!! | TAGTTTTATACATATAATCT+TGG | - | chr5_1:40959772-40959791 | None:intergenic | 15.0% |
| !!! | GATCTTTTTTACAATTAATA+TGG | + | chr5_1:40962335-40962354 | Msa0731000:intron | 15.0% |
| !! | AACATAAATTGTTATGTTAA+TGG | + | chr5_1:40957950-40957969 | Msa0731000:intron | 15.0% |
| !!! | TTTTGTTTGTTGAAATTATA+TGG | + | chr5_1:40958088-40958107 | Msa0731000:intron | 15.0% |
| !!! | TTTGTTTGTTGAAATTATAT+GGG | + | chr5_1:40958089-40958108 | Msa0731000:intron | 15.0% |
| !!! | ACATAAAACATTTAAAATTG+TGG | - | chr5_1:40958179-40958198 | None:intergenic | 15.0% |
| !!! | TAAATGTTTTATGTTAATCT+TGG | + | chr5_1:40958185-40958204 | Msa0731000:intron | 15.0% |
| !! | ATGTACATTCTATAATTTAA+AGG | + | chr5_1:40958288-40958307 | Msa0731000:intron | 15.0% |
| !! | ATATAAGCAAAACATTAATA+TGG | - | chr5_1:40959342-40959361 | None:intergenic | 15.0% |
| !!! | AAAAATGTATTAGAGAATTT+TGG | - | chr5_1:40964456-40964475 | None:intergenic | 15.0% |
| !!! | ATTTAAAATATTTTGAGTCT+AGG | - | chr5_1:40965683-40965702 | None:intergenic | 15.0% |
| !!! | GACTCAAAATATTTTAAATT+TGG | + | chr5_1:40965684-40965703 | Msa0731000:three_prime_UTR | 15.0% |
| !! | TTGATAAATTAAGTTTGTGT+TGG | - | chr5_1:40955770-40955789 | None:intergenic | 20.0% |
| !!! | TTAAGGTAATGTTTTTATGA+GGG | - | chr5_1:40955823-40955842 | None:intergenic | 20.0% |
| !!! | ATTAAGGTAATGTTTTTATG+AGG | - | chr5_1:40955824-40955843 | None:intergenic | 20.0% |
| !!! | TAAATATTTACTCTTTTGTC+CGG | - | chr5_1:40956303-40956322 | None:intergenic | 20.0% |
| !! | AACATTATACACTAAGAAAA+GGG | - | chr5_1:40956491-40956510 | None:intergenic | 20.0% |
| !! | TCACAATACAATCTAAATAT+GGG | + | chr5_1:40956739-40956758 | Msa0731000:intron | 20.0% |
| !! | ATTGTTATGTTAATGGAATT+TGG | + | chr5_1:40957957-40957976 | Msa0731000:intron | 20.0% |
| !!! | TGGTTTTATAAGGAATTATT+TGG | - | chr5_1:40958543-40958562 | None:intergenic | 20.0% |
| !! | AAATCACATATATAATTGGT+TGG | + | chr5_1:40958929-40958948 | Msa0731000:intron | 20.0% |
| !! | TCAAATAAATTAGATAATCG+TGG | - | chr5_1:40959434-40959453 | None:intergenic | 20.0% |
| !! | CGATTATCTAATTTATTTGA+AGG | + | chr5_1:40959434-40959453 | Msa0731000:CDS | 20.0% |
| !! | AAAATCTTATAGTATTCAAG+TGG | - | chr5_1:40960587-40960606 | None:intergenic | 20.0% |
| !!! | CTCTGAAAATATTTTCAATT+TGG | + | chr5_1:40960829-40960848 | Msa0731000:intron | 20.0% |
| !!! | ATAATGACAAAAAGGTTTTT+TGG | - | chr5_1:40961512-40961531 | None:intergenic | 20.0% |
| !! | TGATTTGAATAATGACAAAA+AGG | - | chr5_1:40961520-40961539 | None:intergenic | 20.0% |
| !! | TTATTCAAATCAACTTCAAA+TGG | + | chr5_1:40961528-40961547 | Msa0731000:intron | 20.0% |
| !! | TCACAATACAATCTAAATAT+GGG | + | chr5_1:40956739-40956758 | Msa0731000:intron | 20.0% |
| !! | ATTGTTATGTTAATGGAATT+TGG | + | chr5_1:40957957-40957976 | Msa0731000:intron | 20.0% |
| !!! | TGGTTTTATAAGGAATTATT+TGG | - | chr5_1:40958543-40958562 | None:intergenic | 20.0% |
| !! | AAATCACATATATAATTGGT+TGG | + | chr5_1:40958929-40958948 | Msa0731000:intron | 20.0% |
| !! | TCAAATAAATTAGATAATCG+TGG | - | chr5_1:40959434-40959453 | None:intergenic | 20.0% |
| !! | CGATTATCTAATTTATTTGA+AGG | + | chr5_1:40959434-40959453 | Msa0731000:CDS | 20.0% |
| !!! | TTTTAAAGTTTGATTAGATC+AGG | + | chr5_1:40964365-40964384 | Msa0731000:intron | 20.0% |
| !!! | TTTAAAGTTTGATTAGATCA+GGG | + | chr5_1:40964366-40964385 | Msa0731000:intron | 20.0% |
| !! | GAGAATTTAATTAATACATG+CGG | - | chr5_1:40964680-40964699 | None:intergenic | 20.0% |
| !! | GGAATATAAGAAAAAACATA+TGG | + | chr5_1:40965295-40965314 | Msa0731000:three_prime_UTR | 20.0% |
| !! | TTCTAAAAACAGAAGCTATA+TGG | + | chr5_1:40955994-40956013 | Msa0731000:CDS | 25.0% |
| ! | TCTAAACTAAGCAATGATTA+GGG | - | chr5_1:40956144-40956163 | None:intergenic | 25.0% |
| ! | ATCTAAACTAAGCAATGATT+AGG | - | chr5_1:40956145-40956164 | None:intergenic | 25.0% |
| !! | AAATATTTACTCTTTTGTCC+GGG | - | chr5_1:40956302-40956321 | None:intergenic | 25.0% |
| ! | ACTAGTGTGATCTATATAAA+AGG | + | chr5_1:40956344-40956363 | Msa0731000:intron | 25.0% |
| ! | CTAGTGTGATCTATATAAAA+GGG | + | chr5_1:40956345-40956364 | Msa0731000:intron | 25.0% |
| ! | CAACATTATACACTAAGAAA+AGG | - | chr5_1:40956492-40956511 | None:intergenic | 25.0% |
| ! | GTGTATAATGTTGTTAAAAC+AGG | + | chr5_1:40956499-40956518 | Msa0731000:intron | 25.0% |
| ! | AATCAAAAGTTTACCAACAA+TGG | + | chr5_1:40956549-40956568 | Msa0731000:intron | 25.0% |
| ! | AAATTTGAACTCGTTACTTA+GGG | - | chr5_1:40956649-40956668 | None:intergenic | 25.0% |
| ! | AAAATTTGAACTCGTTACTT+AGG | - | chr5_1:40956650-40956669 | None:intergenic | 25.0% |
| ! | GTCACAATACAATCTAAATA+TGG | + | chr5_1:40956738-40956757 | Msa0731000:intron | 25.0% |
| ! | AAATATGGGTGAATTGAAAT+TGG | + | chr5_1:40956753-40956772 | Msa0731000:intron | 25.0% |
| ! | ATAGAGAAAATTTGACTAGA+TGG | + | chr5_1:40957781-40957800 | Msa0731000:intron | 25.0% |
| ! | TAGAGAAAATTTGACTAGAT+GGG | + | chr5_1:40957782-40957801 | Msa0731000:intron | 25.0% |
| ! | TAAACTTAGTACCTATAACA+TGG | + | chr5_1:40957869-40957888 | Msa0731000:intron | 25.0% |
| !!! | GTTTTTTGTTACCATGTTAT+AGG | - | chr5_1:40957883-40957902 | None:intergenic | 25.0% |
| ! | TTTCAAACATTCATTGAAGT+TGG | + | chr5_1:40957915-40957934 | Msa0731000:intron | 25.0% |
| ! | TTTGTTGAAATTATATGGGT+TGG | + | chr5_1:40958093-40958112 | Msa0731000:intron | 25.0% |
| !! | TAAAATTGTGGTTCTACATT+CGG | - | chr5_1:40958167-40958186 | None:intergenic | 25.0% |
| !! | TTTCTATTTTGTGAGTTTGA+CGG | + | chr5_1:40958317-40958336 | Msa0731000:intron | 25.0% |
| !!! | TTTTGGTTCAGAAAAATCTA+TGG | - | chr5_1:40958358-40958377 | None:intergenic | 25.0% |
| !! | GATAGAGAAAATAAGCATTT+TGG | - | chr5_1:40958375-40958394 | None:intergenic | 25.0% |
| !!! | AATGCTTATTTTCTCTATCT+AGG | + | chr5_1:40958376-40958395 | Msa0731000:intron | 25.0% |
| !!! | ATGCTTATTTTCTCTATCTA+GGG | + | chr5_1:40958377-40958396 | Msa0731000:intron | 25.0% |
| ! | TTGGAATTCATAAGCTTATT+AGG | + | chr5_1:40958426-40958445 | Msa0731000:intron | 25.0% |
| ! | TGGAATTCATAAGCTTATTA+GGG | + | chr5_1:40958427-40958446 | Msa0731000:intron | 25.0% |
| !!! | CTATTTGGATTGGTTTTATA+AGG | - | chr5_1:40958553-40958572 | None:intergenic | 25.0% |
| !! | CTTCTTATAACATTTGAGTT+TGG | + | chr5_1:40958642-40958661 | Msa0731000:intron | 25.0% |
| ! | CTTAAATTATACTTGATGTC+TGG | - | chr5_1:40958828-40958847 | None:intergenic | 25.0% |
| !!! | TGTAAAAAGTATTACATGGT+CGG | - | chr5_1:40958965-40958984 | None:intergenic | 25.0% |
| !!! | TCAGTGTAAAAAGTATTACA+TGG | - | chr5_1:40958969-40958988 | None:intergenic | 25.0% |
| ! | CATAATGAAAATGTTACACA+AGG | + | chr5_1:40959096-40959115 | Msa0731000:CDS | 25.0% |
| !!! | CTTATATGATTTGTTTGCTT+TGG | + | chr5_1:40959355-40959374 | Msa0731000:intron | 25.0% |
| ! | ATAAATTAGATAATCGTGGA+TGG | - | chr5_1:40959430-40959449 | None:intergenic | 25.0% |
| ! | ATTTCAGTTTGATTAGATCA+GGG | + | chr5_1:40959492-40959511 | Msa0731000:intron | 25.0% |
| ! | GGTGTATCATTAATTTCATA+CGG | + | chr5_1:40959513-40959532 | Msa0731000:intron | 25.0% |
| !! | TAAATGTTAGAGGAGAATTT+TGG | - | chr5_1:40959581-40959600 | None:intergenic | 25.0% |
| ! | AATACAAAATTCCCCTAATT+TGG | - | chr5_1:40959610-40959629 | None:intergenic | 25.0% |
| ! | CAAACTGAAATCAAACTTAA+GGG | - | chr5_1:40959693-40959712 | None:intergenic | 25.0% |
| ! | TATTTCACTAAATCGATAGT+TGG | + | chr5_1:40959907-40959926 | Msa0731000:intron | 25.0% |
| !!! | AATCATTTTTTGTTTCCTAG+AGG | - | chr5_1:40960011-40960030 | None:intergenic | 25.0% |
| ! | AACTAGATTCTCAAAAACTT+GGG | - | chr5_1:40960303-40960322 | None:intergenic | 25.0% |
| !! | TTACTAACTTTTGGCAATAT+AGG | + | chr5_1:40960409-40960428 | Msa0731000:intron | 25.0% |
| ! | GGCAATATAGGAAAAAAATA+TGG | + | chr5_1:40960421-40960440 | Msa0731000:intron | 25.0% |
| ! | GGAAAAAAATATGGTTTGAA+TGG | + | chr5_1:40960430-40960449 | Msa0731000:intron | 25.0% |
| ! | AAAAAGAGTGAAATTCAAGA+GGG | - | chr5_1:40960480-40960499 | None:intergenic | 25.0% |
| !! | CTTTTCTATTCCTATCATTT+TGG | + | chr5_1:40960636-40960655 | Msa0731000:intron | 25.0% |
| !! | TGAAAATATTTTCAGAGTCT+AGG | - | chr5_1:40960826-40960845 | None:intergenic | 25.0% |
| ! | TTCTATGTGCATATATCATT+GGG | + | chr5_1:40960902-40960921 | Msa0731000:intron | 25.0% |
| ! | TTCAATAACATTACACCAAT+TGG | - | chr5_1:40960935-40960954 | None:intergenic | 25.0% |
| !!! | ATAGAAGACACTTTTTATGA+AGG | - | chr5_1:40961323-40961342 | None:intergenic | 25.0% |
| !!! | ATGGAACGAATACATTTTTT+TGG | + | chr5_1:40961684-40961703 | Msa0731000:intron | 25.0% |
| !!! | TGGAACGAATACATTTTTTT+GGG | + | chr5_1:40961685-40961704 | Msa0731000:intron | 25.0% |
| !! | AAATGCTCACTAATATTTTG+AGG | - | chr5_1:40962274-40962293 | None:intergenic | 25.0% |
| ! | TTTCAATTTACTCATTCTCT+CGG | + | chr5_1:40962295-40962314 | Msa0731000:intron | 25.0% |
| ! | AAATTTGAACTCGTTACTTA+GGG | - | chr5_1:40956649-40956668 | None:intergenic | 25.0% |
| ! | AAAATTTGAACTCGTTACTT+AGG | - | chr5_1:40956650-40956669 | None:intergenic | 25.0% |
| ! | GTCACAATACAATCTAAATA+TGG | + | chr5_1:40956738-40956757 | Msa0731000:intron | 25.0% |
| ! | AAATATGGGTGAATTGAAAT+TGG | + | chr5_1:40956753-40956772 | Msa0731000:intron | 25.0% |
| ! | ATAGAGAAAATTTGACTAGA+TGG | + | chr5_1:40957781-40957800 | Msa0731000:intron | 25.0% |
| ! | TAGAGAAAATTTGACTAGAT+GGG | + | chr5_1:40957782-40957801 | Msa0731000:intron | 25.0% |
| ! | TAAACTTAGTACCTATAACA+TGG | + | chr5_1:40957869-40957888 | Msa0731000:intron | 25.0% |
| !!! | GTTTTTTGTTACCATGTTAT+AGG | - | chr5_1:40957883-40957902 | None:intergenic | 25.0% |
| ! | TTTCAAACATTCATTGAAGT+TGG | + | chr5_1:40957915-40957934 | Msa0731000:intron | 25.0% |
| ! | TTTGTTGAAATTATATGGGT+TGG | + | chr5_1:40958093-40958112 | Msa0731000:intron | 25.0% |
| !! | TAAAATTGTGGTTCTACATT+CGG | - | chr5_1:40958167-40958186 | None:intergenic | 25.0% |
| !! | TTTCTATTTTGTGAGTTTGA+CGG | + | chr5_1:40958317-40958336 | Msa0731000:intron | 25.0% |
| ! | TTTGTGTTCAGAAAAATCTA+TGG | - | chr5_1:40963244-40963263 | None:intergenic | 25.0% |
| !!! | AATGCTTATTTTCTCTATCT+AGG | + | chr5_1:40958376-40958395 | Msa0731000:intron | 25.0% |
| !!! | ATGCTTATTTTCTCTATCTA+GGG | + | chr5_1:40958377-40958396 | Msa0731000:intron | 25.0% |
| ! | TTGGAATTCATAAGCTTATT+AGG | + | chr5_1:40958426-40958445 | Msa0731000:intron | 25.0% |
| ! | TGGAATTCATAAGCTTATTA+GGG | + | chr5_1:40958427-40958446 | Msa0731000:intron | 25.0% |
| !!! | CTATTTGGATTGGTTTTATA+AGG | - | chr5_1:40958553-40958572 | None:intergenic | 25.0% |
| !! | CTTCTTATAACATTTGAGTT+TGG | + | chr5_1:40958642-40958661 | Msa0731000:intron | 25.0% |
| ! | CTTAAATTATACTTGATGTC+TGG | - | chr5_1:40958828-40958847 | None:intergenic | 25.0% |
| !!! | TGTAAAAAGTATTACATGGT+CGG | - | chr5_1:40958965-40958984 | None:intergenic | 25.0% |
| !!! | TCAGTGTAAAAAGTATTACA+TGG | - | chr5_1:40958969-40958988 | None:intergenic | 25.0% |
| ! | CATAATGAAAATGTTACACA+AGG | + | chr5_1:40959096-40959115 | Msa0731000:CDS | 25.0% |
| !! | TTCTTTTTGTGATGTATGAA+TGG | + | chr5_1:40959308-40959327 | Msa0731000:intron | 25.0% |
| !!! | CTTATATGATTTGTTTGCTT+TGG | + | chr5_1:40959355-40959374 | Msa0731000:intron | 25.0% |
| ! | ATAAATTAGATAATCGTGGA+TGG | - | chr5_1:40959430-40959449 | None:intergenic | 25.0% |
| ! | GGTGTATCATTAATTTCATA+CGG | + | chr5_1:40959513-40959532 | Msa0731000:intron | 25.0% |
| !!! | TTTTCAAGTTCTCCTAAATT+AGG | + | chr5_1:40964472-40964491 | Msa0731000:intron | 25.0% |
| !!! | TTTCAAGTTCTCCTAAATTA+GGG | + | chr5_1:40964473-40964492 | Msa0731000:intron | 25.0% |
| ! | ATACAAAATTCCCCTAATTT+AGG | - | chr5_1:40959609-40959628 | None:intergenic | 25.0% |
| ! | TATGTTTGGAAATTTAAGAG+GGG | - | chr5_1:40964548-40964567 | None:intergenic | 25.0% |
| ! | GTATGTTTGGAAATTTAAGA+GGG | - | chr5_1:40964549-40964568 | None:intergenic | 25.0% |
| ! | CAAACTGAAATCAAACTTAA+GGG | - | chr5_1:40959693-40959712 | None:intergenic | 25.0% |
| !!! | AATCATTTTTTGTTTCCTAG+AGG | - | chr5_1:40960011-40960030 | None:intergenic | 25.0% |
| !! | TTTTGAATATTCCCTCTTTT+TGG | + | chr5_1:40965375-40965394 | Msa0731000:intron | 25.0% |
| ! | AAAATCTTGTAGTATTCAAG+TGG | - | chr5_1:40965483-40965502 | None:intergenic | 25.0% |
| !! | CTTTTCTATTCCTATCATTT+TGG | + | chr5_1:40960636-40960655 | Msa0731000:intron | 25.0% |
| !! | TTTAGAAGTTTAAGGAGTAT+GGG | - | chr5_1:40965653-40965672 | None:intergenic | 25.0% |
| !!! | TTTTAGAAGTTTAAGGAGTA+TGG | - | chr5_1:40965654-40965673 | None:intergenic | 25.0% |
| ! | TCATCCAAAAACAAAATCAA+GGG | - | chr5_1:40965714-40965733 | None:intergenic | 25.0% |
| ! | TTCATCCAAAAACAAAATCA+AGG | - | chr5_1:40965715-40965734 | None:intergenic | 25.0% |
| !! | AATGTTTTTATGAGGGAACA+GGG | - | chr5_1:40955816-40955835 | None:intergenic | 30.0% |
| !! | TAATGTTTTTATGAGGGAAC+AGG | - | chr5_1:40955817-40955836 | None:intergenic | 30.0% |
| !! | TTGTCTCTTGCTTTTGATTA+AGG | - | chr5_1:40955840-40955859 | None:intergenic | 30.0% |
| TACTATGTTGTAACTGATGA+AGG | + | chr5_1:40956089-40956108 | Msa0731000:CDS | 30.0% | |
| TCAAGTCAATTATTGTGATG+AGG | + | chr5_1:40956217-40956236 | Msa0731000:intron | 30.0% | |
| CAAGTCAATTATTGTGATGA+GGG | + | chr5_1:40956218-40956237 | Msa0731000:intron | 30.0% | |
| AATTATTGTGATGAGGGTTT+GGG | + | chr5_1:40956224-40956243 | Msa0731000:intron | 30.0% | |
| ! | AGTTTAACTGGTTTAAGCTA+AGG | + | chr5_1:40956248-40956267 | Msa0731000:intron | 30.0% |
| ! | GTTTAACTGGTTTAAGCTAA+GGG | + | chr5_1:40956249-40956268 | Msa0731000:intron | 30.0% |
| AAATAAGGCCAAAAACAAAC+AGG | - | chr5_1:40956421-40956440 | None:intergenic | 30.0% | |
| AAAAGATCTAGACCAAGTTA+GGG | + | chr5_1:40956464-40956483 | Msa0731000:intron | 30.0% | |
| GGATGTTATTAGTTAAGTGT+TGG | + | chr5_1:40956520-40956539 | Msa0731000:intron | 30.0% | |
| GGTGCAAACAAAAAAAAATG+AGG | + | chr5_1:40956797-40956816 | Msa0731000:intron | 30.0% | |
| GCAAACAAAAAAAAATGAGG+AGG | + | chr5_1:40956800-40956819 | Msa0731000:intron | 30.0% | |
| AAAAAAAAATGAGGAGGTTC+AGG | + | chr5_1:40956806-40956825 | Msa0731000:intron | 30.0% | |
| AAAAAAAATGAGGAGGTTCA+GGG | + | chr5_1:40956807-40956826 | Msa0731000:intron | 30.0% | |
| GAAGGCTTATAAGAATTGTT+AGG | + | chr5_1:40957031-40957050 | Msa0731000:intron | 30.0% | |
| AAGATGCATCTTGTTGATAT+GGG | - | chr5_1:40957062-40957081 | None:intergenic | 30.0% | |
| ! | AACAAGATGCATCTTCTTTT+CGG | + | chr5_1:40957067-40957086 | Msa0731000:intron | 30.0% |
| GAAGGCTTATAAGAATTGTT+AGG | + | chr5_1:40957031-40957050 | Msa0731000:intron | 30.0% | |
| AAGATGCATCTTGTTGATAT+GGG | - | chr5_1:40957062-40957081 | None:intergenic | 30.0% | |
| ! | AACAAGATGCATCTTCTTTT+CGG | + | chr5_1:40957067-40957086 | Msa0731000:intron | 30.0% |
| TTCTCTATATGCAAGAGTTA+GGG | - | chr5_1:40957769-40957788 | None:intergenic | 30.0% | |
| TTTCTCTATATGCAAGAGTT+AGG | - | chr5_1:40957770-40957789 | None:intergenic | 30.0% | |
| AGAGAAAATTTGACTAGATG+GGG | + | chr5_1:40957783-40957802 | Msa0731000:intron | 30.0% | |
| TAGTGATGACTAATCTTCAT+TGG | - | chr5_1:40957839-40957858 | None:intergenic | 30.0% | |
| !!! | TTACTGGTTTTCAGTTTTCA+TGG | + | chr5_1:40958233-40958252 | Msa0731000:intron | 30.0% |
| TTCAGAAAAATCTATGGATC+TGG | - | chr5_1:40958352-40958371 | None:intergenic | 30.0% | |
| !! | TGCTTATTTTCTCTATCTAG+GGG | + | chr5_1:40958378-40958397 | Msa0731000:intron | 30.0% |
| GGAATTCATAAGCTTATTAG+GGG | + | chr5_1:40958428-40958447 | Msa0731000:intron | 30.0% | |
| ! | TACAATATTTTCTCCCAAAC+AGG | + | chr5_1:40958489-40958508 | Msa0731000:intron | 30.0% |
| ! | CATTTTCTTTAGCGTTTTTG+CGG | + | chr5_1:40958750-40958769 | Msa0731000:intron | 30.0% |
| ! | ATTTTCTTTAGCGTTTTTGC+GGG | + | chr5_1:40958751-40958770 | Msa0731000:intron | 30.0% |
| ! | AAATTCCAGTTTTCCAATCA+AGG | - | chr5_1:40959212-40959231 | None:intergenic | 30.0% |
| TGCAAAGAAAGAAAAGATTG+AGG | + | chr5_1:40959254-40959273 | Msa0731000:CDS | 30.0% | |
| ! | ATTTGTTTGCTTTGGTTCAA+GGG | + | chr5_1:40959363-40959382 | Msa0731000:intron | 30.0% |
| GATTTCAGTTTGATTAGATC+AGG | + | chr5_1:40959491-40959510 | Msa0731000:intron | 30.0% | |
| !! | ACATTTAGTTCTGCCAAATT+AGG | + | chr5_1:40959594-40959613 | Msa0731000:intron | 30.0% |
| !! | CATTTAGTTCTGCCAAATTA+GGG | + | chr5_1:40959595-40959614 | Msa0731000:intron | 30.0% |
| !! | ATTTAGTTCTGCCAAATTAG+GGG | + | chr5_1:40959596-40959615 | Msa0731000:intron | 30.0% |
| ! | TCAAACTTAAGGGTATGTTT+GGG | - | chr5_1:40959683-40959702 | None:intergenic | 30.0% |
| ! | ATCAAACTTAAGGGTATGTT+TGG | - | chr5_1:40959684-40959703 | None:intergenic | 30.0% |
| CCAAACTGAAATCAAACTTA+AGG | - | chr5_1:40959694-40959713 | None:intergenic | 30.0% | |
| ! | CCTTAAGTTTGATTTCAGTT+TGG | + | chr5_1:40959691-40959710 | Msa0731000:intron | 30.0% |
| ACTTGACCATTACAGAAATT+CGG | - | chr5_1:40959870-40959889 | None:intergenic | 30.0% | |
| CAACTAGATTCTCAAAAACT+TGG | - | chr5_1:40960304-40960323 | None:intergenic | 30.0% | |
| !! | AGTTTTTGAGAATCTAGTTG+AGG | + | chr5_1:40960304-40960323 | Msa0731000:intron | 30.0% |
| AAGTTAGTAAGCATTCTGTT+AGG | - | chr5_1:40960399-40960418 | None:intergenic | 30.0% | |
| ! | ACAGAATGCTTACTAACTTT+TGG | + | chr5_1:40960400-40960419 | Msa0731000:intron | 30.0% |
| AAAAGAGTGAAATTCAAGAG+GGG | - | chr5_1:40960479-40960498 | None:intergenic | 30.0% | |
| CAAAAAGAGTGAAATTCAAG+AGG | - | chr5_1:40960481-40960500 | None:intergenic | 30.0% | |
| ! | CTCTTGAATTTCACTCTTTT+TGG | + | chr5_1:40960479-40960498 | Msa0731000:intron | 30.0% |
| AATGAGAGAACCAAAATGAT+AGG | - | chr5_1:40960649-40960668 | None:intergenic | 30.0% | |
| AATTTGAACATCATTGATGC+AGG | - | chr5_1:40960694-40960713 | None:intergenic | 30.0% | |
| ! | TTTAGAAGTTTAGGGAGTAT+GGG | - | chr5_1:40960796-40960815 | None:intergenic | 30.0% |
| !! | TTTTAGAAGTTTAGGGAGTA+TGG | - | chr5_1:40960797-40960816 | None:intergenic | 30.0% |
| !! | GTGCAACTTTTAGAAGTTTA+GGG | - | chr5_1:40960804-40960823 | None:intergenic | 30.0% |
| TCATCCAAAAACAAAATCCA+GGG | - | chr5_1:40960859-40960878 | None:intergenic | 30.0% | |
| GAACCATAAACCATTCATTT+GGG | - | chr5_1:40960885-40960904 | None:intergenic | 30.0% | |
| AGAACCATAAACCATTCATT+TGG | - | chr5_1:40960886-40960905 | None:intergenic | 30.0% | |
| GTTCTATGTGCATATATCAT+TGG | + | chr5_1:40960901-40960920 | Msa0731000:intron | 30.0% | |
| TGATAAAAGACACCTTCAAA+GGG | - | chr5_1:40961183-40961202 | None:intergenic | 30.0% | |
| TTGATAAAAGACACCTTCAA+AGG | - | chr5_1:40961184-40961203 | None:intergenic | 30.0% | |
| ACACCTTCATAAAAAGTAGT+TGG | + | chr5_1:40961255-40961274 | Msa0731000:intron | 30.0% | |
| !!! | ACACCAACTACTTTTTATGA+AGG | - | chr5_1:40961261-40961280 | None:intergenic | 30.0% |
| !! | ACTTGCACCTTATTGTTTTT+AGG | - | chr5_1:40961462-40961481 | None:intergenic | 30.0% |
| !!! | TTTTTTGGTCAAATCCAAGT+GGG | - | chr5_1:40961497-40961516 | None:intergenic | 30.0% |
| TCAAATCAACTTCAAATGGA+AGG | + | chr5_1:40961532-40961551 | Msa0731000:intron | 30.0% | |
| !!! | AACGAATACATTTTTTTGGG+TGG | + | chr5_1:40961688-40961707 | Msa0731000:intron | 30.0% |
| TGCGACAAATAAGTATAGTA+TGG | + | chr5_1:40961766-40961785 | Msa0731000:intron | 30.0% | |
| TTCACAATGGAGAAAGATAT+GGG | - | chr5_1:40962194-40962213 | None:intergenic | 30.0% | |
| ! | TTTCTCCATTGTGAAGTTTT+TGG | + | chr5_1:40962199-40962218 | Msa0731000:intron | 30.0% |
| AAGAACCAAAAACTTCACAA+TGG | - | chr5_1:40962207-40962226 | None:intergenic | 30.0% | |
| !!! | GTGAAGTTTTTGGTTCTTTA+TGG | + | chr5_1:40962209-40962228 | Msa0731000:intron | 30.0% |
| !!! | GAACTTTTAACTTTACTCGA+AGG | + | chr5_1:40962396-40962415 | Msa0731000:intron | 30.0% |
| GGTGCAAACAAAAAAAAATG+AGG | + | chr5_1:40956797-40956816 | Msa0731000:intron | 30.0% | |
| GCAAACAAAAAAAAATGAGG+AGG | + | chr5_1:40956800-40956819 | Msa0731000:intron | 30.0% | |
| AAAAAAAAATGAGGAGGTTC+AGG | + | chr5_1:40956806-40956825 | Msa0731000:intron | 30.0% | |
| AAAAAAAATGAGGAGGTTCA+GGG | + | chr5_1:40956807-40956826 | Msa0731000:intron | 30.0% | |
| TTCTCTATATGCAAGAGTTA+GGG | - | chr5_1:40957769-40957788 | None:intergenic | 30.0% | |
| TTTCTCTATATGCAAGAGTT+AGG | - | chr5_1:40957770-40957789 | None:intergenic | 30.0% | |
| AGAGAAAATTTGACTAGATG+GGG | + | chr5_1:40957783-40957802 | Msa0731000:intron | 30.0% | |
| TAGTGATGACTAATCTTCAT+TGG | - | chr5_1:40957839-40957858 | None:intergenic | 30.0% | |
| TTCTACATTCGGAAAATAGA+CGG | - | chr5_1:40963042-40963061 | None:intergenic | 30.0% | |
| !!! | TTACTGGTTTTCAGTTTTCA+TGG | + | chr5_1:40958233-40958252 | Msa0731000:intron | 30.0% |
| TTCAGAAAAATCTATGGATC+TGG | - | chr5_1:40958352-40958371 | None:intergenic | 30.0% | |
| !! | TGCTTATTTTCTCTATCTAG+GGG | + | chr5_1:40958378-40958397 | Msa0731000:intron | 30.0% |
| GGAATTCATAAGCTTATTAG+GGG | + | chr5_1:40958428-40958447 | Msa0731000:intron | 30.0% | |
| ! | TACAATATTTTCTCCCAAAC+AGG | + | chr5_1:40958489-40958508 | Msa0731000:intron | 30.0% |
| ! | AAATTCCAGTTTTCCAATCA+AGG | - | chr5_1:40959212-40959231 | None:intergenic | 30.0% |
| TGCAAAGAAAGAAAAGATTG+AGG | + | chr5_1:40959254-40959273 | Msa0731000:CDS | 30.0% | |
| ! | ATTTGTTTGCTTTGGTTCAA+GGG | + | chr5_1:40959363-40959382 | Msa0731000:intron | 30.0% |
| ! | TTCAAGTTCTCCTAAATTAG+GGG | + | chr5_1:40964474-40964493 | Msa0731000:intron | 30.0% |
| GGTATGTTTGGAAATTTAAG+AGG | - | chr5_1:40964550-40964569 | None:intergenic | 30.0% | |
| ! | ATCAAACTTAAGGGTATGTT+TGG | - | chr5_1:40959684-40959703 | None:intergenic | 30.0% |
| CCAAACTGAAATCAAACTTA+AGG | - | chr5_1:40959694-40959713 | None:intergenic | 30.0% | |
| ! | CCTTAAGTTTGATTTCAGTT+TGG | + | chr5_1:40959691-40959710 | Msa0731000:intron | 30.0% |
| ACTTGACCATTACTGAAATT+CGG | - | chr5_1:40964744-40964763 | None:intergenic | 30.0% | |
| TACTTCACTAAATCGATAGT+TGG | + | chr5_1:40964781-40964800 | Msa0731000:intron | 30.0% | |
| !! | AGTTTTTGAGAATCTAGTTG+AGG | + | chr5_1:40960304-40960323 | Msa0731000:intron | 30.0% |
| AACACTACAAACCAAAAAGA+GGG | - | chr5_1:40960493-40960512 | None:intergenic | 30.0% | |
| AAACACTACAAACCAAAAAG+AGG | - | chr5_1:40960494-40960513 | None:intergenic | 30.0% | |
| !! | GTGCAACTTTTAGAAGTTTA+AGG | - | chr5_1:40960804-40960823 | None:intergenic | 30.0% |
| !!! | AACACCCTTGATTTTGTTTT+TGG | + | chr5_1:40965707-40965726 | Msa0731000:three_prime_UTR | 30.0% |
| ! | ACACATTTAGTTCCTGAACT+TGG | - | chr5_1:40956029-40956048 | None:intergenic | 35.0% |
| TGAGGATATTCAAACACATG+TGG | + | chr5_1:40956052-40956071 | Msa0731000:CDS | 35.0% | |
| TCTTCACACTATTTCCACAA+AGG | + | chr5_1:40956112-40956131 | Msa0731000:CDS | 35.0% | |
| CAATTATTGTGATGAGGGTT+TGG | + | chr5_1:40956223-40956242 | Msa0731000:intron | 35.0% | |
| CGATGATGAATTGTAGAAGA+AGG | + | chr5_1:40956395-40956414 | Msa0731000:intron | 35.0% | |
| CATGTGAACAGCAACAAATA+AGG | - | chr5_1:40956436-40956455 | None:intergenic | 35.0% | |
| ! | TGGTCTAGATCTTTTCAACA+GGG | - | chr5_1:40956459-40956478 | None:intergenic | 35.0% |
| ! | TTGGTCTAGATCTTTTCAAC+AGG | - | chr5_1:40956460-40956479 | None:intergenic | 35.0% |
| GAAAAGATCTAGACCAAGTT+AGG | + | chr5_1:40956463-40956482 | Msa0731000:intron | 35.0% | |
| TACTTGGATCAATCCATTGT+TGG | - | chr5_1:40956565-40956584 | None:intergenic | 35.0% | |
| !! | AATGGATTGATCCAAGTAGT+AGG | + | chr5_1:40956567-40956586 | Msa0731000:intron | 35.0% |
| ! | ATGGATTGATCCAAGTAGTA+GGG | + | chr5_1:40956568-40956587 | Msa0731000:intron | 35.0% |
| ACCCTTTAAGCAAGTGATTA+GGG | + | chr5_1:40956598-40956617 | Msa0731000:intron | 35.0% | |
| ! | GGGTGAATTGAAATTGGTTT+CGG | + | chr5_1:40956759-40956778 | Msa0731000:intron | 35.0% |
| AAAAAAATGAGGAGGTTCAG+GGG | + | chr5_1:40956808-40956827 | Msa0731000:intron | 35.0% | |
| GAAGATGCATCTTGTTGATA+TGG | - | chr5_1:40957063-40957082 | None:intergenic | 35.0% | |
| ! | ACAAGATGCATCTTCTTTTC+GGG | + | chr5_1:40957068-40957087 | Msa0731000:intron | 35.0% |
| GAAGATGCATCTTGTTGATA+TGG | - | chr5_1:40957063-40957082 | None:intergenic | 35.0% | |
| ! | ACAAGATGCATCTTCTTTTC+GGG | + | chr5_1:40957068-40957087 | Msa0731000:intron | 35.0% |
| ! | AGTTAGGGATCTGATAATGA+CGG | - | chr5_1:40957754-40957773 | None:intergenic | 35.0% |
| ! | GATTAGTCATCACTAAACGA+CGG | + | chr5_1:40957844-40957863 | Msa0731000:intron | 35.0% |
| GGAAATAGGACTAAATAGAC+GGG | - | chr5_1:40958146-40958165 | None:intergenic | 35.0% | |
| CGGAAATAGGACTAAATAGA+CGG | - | chr5_1:40958147-40958166 | None:intergenic | 35.0% | |
| ! | TCAATACGTAGGTCTTTTAC+TGG | + | chr5_1:40958217-40958236 | Msa0731000:intron | 35.0% |
| AGCACATTGAAAACAGCTTA+TGG | + | chr5_1:40958451-40958470 | Msa0731000:intron | 35.0% | |
| GCACATTGAAAACAGCTTAT+GGG | + | chr5_1:40958452-40958471 | Msa0731000:intron | 35.0% | |
| AAGTGCTTATGAACCTGTTT+GGG | - | chr5_1:40958505-40958524 | None:intergenic | 35.0% | |
| TAAGTGCTTATGAACCTGTT+TGG | - | chr5_1:40958506-40958525 | None:intergenic | 35.0% | |
| TGTCCTTTGATACACAACTT+CGG | + | chr5_1:40958678-40958697 | Msa0731000:intron | 35.0% | |
| TGTGAGAACACTCATACAAT+AGG | - | chr5_1:40958781-40958800 | None:intergenic | 35.0% | |
| ! | TGATGAACGTTGTTTCCAAA+AGG | - | chr5_1:40959078-40959097 | None:intergenic | 35.0% |
| ! | GAAATTATGTGGCATGCTTT+TGG | + | chr5_1:40959148-40959167 | Msa0731000:CDS | 35.0% |
| GAAAACTGGAATTTCAGCAA+AGG | + | chr5_1:40959218-40959237 | Msa0731000:CDS | 35.0% | |
| TGGAATTTCAGCAAAGGATT+GGG | + | chr5_1:40959224-40959243 | Msa0731000:CDS | 35.0% | |
| ! | GATTTGTTTGCTTTGGTTCA+AGG | + | chr5_1:40959362-40959381 | Msa0731000:intron | 35.0% |
| ! | TGTTAGAGGAGAATTTTGGA+GGG | - | chr5_1:40959577-40959596 | None:intergenic | 35.0% |
| ! | ATGTTAGAGGAGAATTTTGG+AGG | - | chr5_1:40959578-40959597 | None:intergenic | 35.0% |
| TTGGCAGAACTAAATGTTAG+AGG | - | chr5_1:40959591-40959610 | None:intergenic | 35.0% | |
| TATGTTTGGGAATTCAAGAG+GGG | - | chr5_1:40959670-40959689 | None:intergenic | 35.0% | |
| GTATGTTTGGGAATTCAAGA+GGG | - | chr5_1:40959671-40959690 | None:intergenic | 35.0% | |
| TTCCATCCGAATTTCTGTAA+TGG | + | chr5_1:40959861-40959880 | Msa0731000:intron | 35.0% | |
| TCGTGTAAAGAAGATACTCA+AGG | - | chr5_1:40959970-40959989 | None:intergenic | 35.0% | |
| TAACCTGTTATACTTCCTCT+AGG | + | chr5_1:40959993-40960012 | Msa0731000:intron | 35.0% | |
| ! | TTTCCTAGAGGAAGTATAAC+AGG | - | chr5_1:40959999-40960018 | None:intergenic | 35.0% |
| ! | TTTTTCCTTGACATTGCTAC+AGG | + | chr5_1:40960091-40960110 | Msa0731000:intron | 35.0% |
| ! | TTTTCCTTGACATTGCTACA+GGG | + | chr5_1:40960092-40960111 | Msa0731000:intron | 35.0% |
| AACTAAAACACAGAGACCAA+GGG | - | chr5_1:40960181-40960200 | None:intergenic | 35.0% | |
| AAACTAAAACACAGAGACCA+AGG | - | chr5_1:40960182-40960201 | None:intergenic | 35.0% | |
| ! | TAGTTTCTGGATTGCAACTT+TGG | + | chr5_1:40960196-40960215 | Msa0731000:intron | 35.0% |
| !! | GGTGCAACTTTTAGAAGTTT+AGG | - | chr5_1:40960805-40960824 | None:intergenic | 35.0% |
| !! | ATTTTCAATTTGGAACACCC+TGG | + | chr5_1:40960839-40960858 | Msa0731000:intron | 35.0% |
| !!! | AACACCCTGGATTTTGTTTT+TGG | + | chr5_1:40960852-40960871 | Msa0731000:intron | 35.0% |
| GTCATCCAAAAACAAAATCC+AGG | - | chr5_1:40960860-40960879 | None:intergenic | 35.0% | |
| CTACCCAAATGAATGGTTTA+TGG | + | chr5_1:40960879-40960898 | Msa0731000:intron | 35.0% | |
| TCATTGGGAAAATGTCCAAT+TGG | + | chr5_1:40960917-40960936 | Msa0731000:intron | 35.0% | |
| ! | TTTTATCAAGTCACACCTCA+AGG | + | chr5_1:40961195-40961214 | Msa0731000:intron | 35.0% |
| AAAGTGAAAATCACACCTTG+AGG | - | chr5_1:40961213-40961232 | None:intergenic | 35.0% | |
| !!! | GCACCTTATTGTTTTTAGGT+GGG | - | chr5_1:40961458-40961477 | None:intergenic | 35.0% |
| !!! | TGCACCTTATTGTTTTTAGG+TGG | - | chr5_1:40961459-40961478 | None:intergenic | 35.0% |
| !!! | GTTTTTTGGTCAAATCCAAG+TGG | - | chr5_1:40961498-40961517 | None:intergenic | 35.0% |
| AATCAACTTCAAATGGAAGG+AGG | + | chr5_1:40961535-40961554 | Msa0731000:intron | 35.0% | |
| !!! | CATTTTTTTGGGTGGATAGA+TGG | + | chr5_1:40961696-40961715 | Msa0731000:intron | 35.0% |
| ! | AGATATGTGTTTGCTAGGTT+TGG | + | chr5_1:40961793-40961812 | Msa0731000:intron | 35.0% |
| !! | TGCAGTCTAATGTTTTTGAC+AGG | + | chr5_1:40961912-40961931 | Msa0731000:intron | 35.0% |
| !! | AGTCTAATGTTTTTGACAGG+TGG | + | chr5_1:40961915-40961934 | Msa0731000:intron | 35.0% |
| !! | ATATCAGGTGTTGACATCTA+TGG | + | chr5_1:40961982-40962001 | Msa0731000:intron | 35.0% |
| !! | CTTTGAAGATTGTTTCTGGT+TGG | - | chr5_1:40962106-40962125 | None:intergenic | 35.0% |
| CAACCAGAAACAATCTTCAA+AGG | + | chr5_1:40962104-40962123 | Msa0731000:intron | 35.0% | |
| CTTCACAATGGAGAAAGATA+TGG | - | chr5_1:40962195-40962214 | None:intergenic | 35.0% | |
| ! | GGGTGAATTGAAATTGGTTT+CGG | + | chr5_1:40956759-40956778 | Msa0731000:intron | 35.0% |
| ! | AGTTAGGGATCTGATAATGA+CGG | - | chr5_1:40957754-40957773 | None:intergenic | 35.0% |
| ! | GATTAGTCATCACTAAACGA+CGG | + | chr5_1:40957844-40957863 | Msa0731000:intron | 35.0% |
| TCTACATTCGGAAAATAGAC+GGG | - | chr5_1:40963041-40963060 | None:intergenic | 35.0% | |
| ! | TCAATACGTAGGTCTTTTAC+TGG | + | chr5_1:40958217-40958236 | Msa0731000:intron | 35.0% |
| AGCACATTGAAAACAGCTTA+TGG | + | chr5_1:40958451-40958470 | Msa0731000:intron | 35.0% | |
| GCACATTGAAAACAGCTTAT+GGG | + | chr5_1:40958452-40958471 | Msa0731000:intron | 35.0% | |
| AAGTGCTTATGAACCTGTTT+GGG | - | chr5_1:40958505-40958524 | None:intergenic | 35.0% | |
| TAAGTGCTTATGAACCTGTT+TGG | - | chr5_1:40958506-40958525 | None:intergenic | 35.0% | |
| TGTCCTTTGATACACAACTT+CGG | + | chr5_1:40958678-40958697 | Msa0731000:intron | 35.0% | |
| ! | CATTTTCTTGAGCGTTTTTG+CGG | + | chr5_1:40963636-40963655 | Msa0731000:intron | 35.0% |
| ! | ATTTTCTTGAGCGTTTTTGC+GGG | + | chr5_1:40963637-40963656 | Msa0731000:intron | 35.0% |
| ! | TGATGAACGTTGTTTCCAAA+AGG | - | chr5_1:40959078-40959097 | None:intergenic | 35.0% |
| ! | GAAATTATGTGGCATGCTTT+TGG | + | chr5_1:40959148-40959167 | Msa0731000:CDS | 35.0% |
| GAAAACTGGAATTTCAGCAA+AGG | + | chr5_1:40959218-40959237 | Msa0731000:CDS | 35.0% | |
| TGGAATTTCAGCAAAGGATT+GGG | + | chr5_1:40959224-40959243 | Msa0731000:CDS | 35.0% | |
| ! | GATTTGTTTGCTTTGGTTCA+AGG | + | chr5_1:40959362-40959381 | Msa0731000:intron | 35.0% |
| TTCCATCCGAATTTCAGTAA+TGG | + | chr5_1:40964735-40964754 | Msa0731000:intron | 35.0% | |
| ! | TTTCCTAGAGGAAGTATAAC+AGG | - | chr5_1:40959999-40960018 | None:intergenic | 35.0% |
| ! | TTTTTCCTTGACATTGCTAC+AGG | + | chr5_1:40960091-40960110 | Msa0731000:intron | 35.0% |
| ! | TTTTCCTTGACATTGCTACA+GGG | + | chr5_1:40960092-40960111 | Msa0731000:intron | 35.0% |
| ! | TAGTTTCTGGATTGCAACTT+TGG | + | chr5_1:40960196-40960215 | Msa0731000:intron | 35.0% |
| ACAAACAAGAAACCAAGAAG+AGG | + | chr5_1:40960353-40960372 | Msa0731000:intron | 35.0% | |
| TACATATTTCACACCCTTCA+CGG | - | chr5_1:40965327-40965346 | None:intergenic | 35.0% | |
| TCAAAAAGAGTGAAACTCGA+GGG | - | chr5_1:40965361-40965380 | None:intergenic | 35.0% | |
| TTCAAAAAGAGTGAAACTCG+AGG | - | chr5_1:40965362-40965381 | None:intergenic | 35.0% | |
| ! | ATTTGGAATGCTTTGATAGC+AGG | + | chr5_1:40965623-40965642 | Msa0731000:three_prime_UTR | 35.0% |
| ! | TTTGGAATGCTTTGATAGCA+GGG | + | chr5_1:40965624-40965643 | Msa0731000:three_prime_UTR | 35.0% |
| TTTATGAGGGAACAGGGTTT+GGG | - | chr5_1:40955810-40955829 | None:intergenic | 40.0% | |
| ! | TTTTATGAGGGAACAGGGTT+TGG | - | chr5_1:40955811-40955830 | None:intergenic | 40.0% |
| CAAGCAATGAAGTTAAGCGA+TGG | + | chr5_1:40955921-40955940 | Msa0731000:exon | 40.0% | |
| AGGAACTAAATGTGTGTCTG+AGG | + | chr5_1:40956034-40956053 | Msa0731000:CDS | 40.0% | |
| GATTAGGGAACATACCTTTG+TGG | - | chr5_1:40956129-40956148 | None:intergenic | 40.0% | |
| CTGGTTTAAGCTAAGGGTTA+AGG | + | chr5_1:40956255-40956274 | Msa0731000:intron | 40.0% | |
| TAAGCTAAGGGTTAAGGAGT+TGG | + | chr5_1:40956261-40956280 | Msa0731000:intron | 40.0% | |
| !! | GAAGAAGGCCTGTTTGTTTT+TGG | + | chr5_1:40956410-40956429 | Msa0731000:intron | 40.0% |
| TAAGAAAAGGGTCCCTAACT+TGG | - | chr5_1:40956479-40956498 | None:intergenic | 40.0% | |
| TGGATTGATCCAAGTAGTAG+GGG | + | chr5_1:40956569-40956588 | Msa0731000:intron | 40.0% | |
| GACCCTTTAAGCAAGTGATT+AGG | + | chr5_1:40956597-40956616 | Msa0731000:intron | 40.0% | |
| CCCCTAATCACTTGCTTAAA+GGG | - | chr5_1:40956602-40956621 | None:intergenic | 40.0% | |
| CCCTTTAAGCAAGTGATTAG+GGG | + | chr5_1:40956599-40956618 | Msa0731000:intron | 40.0% | |
| ACCCCTAATCACTTGCTTAA+AGG | - | chr5_1:40956603-40956622 | None:intergenic | 40.0% | |
| AAAAAATGAGGAGGTTCAGG+GGG | + | chr5_1:40956809-40956828 | Msa0731000:intron | 40.0% | |
| ! | TGTTACACACGTGATAGTGA+GGG | - | chr5_1:40956846-40956865 | None:intergenic | 40.0% |
| TAGTAGGAACCGAAACACAT+CGG | + | chr5_1:40956959-40956978 | Msa0731000:intron | 40.0% | |
| !! | AAAAGACTCGTGTTGGTTTG+TGG | + | chr5_1:40957205-40957224 | Msa0731000:intron | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+GGG | + | chr5_1:40957206-40957225 | Msa0731000:intron | 40.0% |
| TAGTAGGAACCGAAACACAT+CGG | + | chr5_1:40956959-40956978 | Msa0731000:intron | 40.0% | |
| !! | AAAAGACTCGTGTTGGTTTG+TGG | + | chr5_1:40957205-40957224 | Msa0731000:intron | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+GGG | + | chr5_1:40957206-40957225 | Msa0731000:intron | 40.0% |
| AATCTTCATTGGAGAACCTG+CGG | - | chr5_1:40957828-40957847 | None:intergenic | 40.0% | |
| ! | GTGGTTCTACATTCGGAAAT+AGG | - | chr5_1:40958160-40958179 | None:intergenic | 40.0% |
| GGTGCAACAATTCAATACGT+AGG | + | chr5_1:40958206-40958225 | Msa0731000:intron | 40.0% | |
| TGAAGAGTGGATAAGCTTCT+TGG | + | chr5_1:40958407-40958426 | Msa0731000:intron | 40.0% | |
| ! | CTTCTATGGGCTATTTGGAT+TGG | - | chr5_1:40958563-40958582 | None:intergenic | 40.0% |
| TCCAAATAGCCCATAGAAGA+TGG | + | chr5_1:40958564-40958583 | Msa0731000:intron | 40.0% | |
| ! | ACCATCTTCTATGGGCTATT+TGG | - | chr5_1:40958568-40958587 | None:intergenic | 40.0% |
| AATAGCCCATAGAAGATGGT+AGG | + | chr5_1:40958568-40958587 | Msa0731000:intron | 40.0% | |
| CCAAACCTACCATCTTCTAT+GGG | - | chr5_1:40958576-40958595 | None:intergenic | 40.0% | |
| TCCAAACCTACCATCTTCTA+TGG | - | chr5_1:40958577-40958596 | None:intergenic | 40.0% | |
| GTCCTTTGATACACAACTTC+GGG | + | chr5_1:40958679-40958698 | Msa0731000:intron | 40.0% | |
| ATCCCGAAGTTGTGTATCAA+AGG | - | chr5_1:40958684-40958703 | None:intergenic | 40.0% | |
| TTTGATACACAACTTCGGGA+TGG | + | chr5_1:40958683-40958702 | Msa0731000:intron | 40.0% | |
| ! | TTGCAGGTAACATCTCCTTT+TGG | + | chr5_1:40959060-40959079 | Msa0731000:intron | 40.0% |
| TACCGAGAGTGGAAATTATG+TGG | + | chr5_1:40959137-40959156 | Msa0731000:CDS | 40.0% | |
| TGCCACATAATTTCCACTCT+CGG | - | chr5_1:40959142-40959161 | None:intergenic | 40.0% | |
| ! | TTATGTGGCATGCTTTTGGA+TGG | + | chr5_1:40959152-40959171 | Msa0731000:CDS | 40.0% |
| TGACACTTACACTACCTTCA+GGG | - | chr5_1:40959188-40959207 | None:intergenic | 40.0% | |
| CTGGAATTTCAGCAAAGGAT+TGG | + | chr5_1:40959223-40959242 | Msa0731000:CDS | 40.0% | |
| !! | AGGGTGTTGAACTTGAAATC+AGG | + | chr5_1:40959382-40959401 | Msa0731000:intron | 40.0% |
| TTCAAGAGGGGAAGAATTGA+GGG | - | chr5_1:40959658-40959677 | None:intergenic | 40.0% | |
| ATTCAAGAGGGGAAGAATTG+AGG | - | chr5_1:40959659-40959678 | None:intergenic | 40.0% | |
| GGTATGTTTGGGAATTCAAG+AGG | - | chr5_1:40959672-40959691 | None:intergenic | 40.0% | |
| ! | TGTATTGACCATGTGATGCT+CGG | + | chr5_1:40959719-40959738 | Msa0731000:intron | 40.0% |
| GACCATTACAGAAATTCGGA+TGG | - | chr5_1:40959866-40959885 | None:intergenic | 40.0% | |
| AAACAAATGCTAGAGTCGCT+TGG | + | chr5_1:40960142-40960161 | Msa0731000:intron | 40.0% | |
| TGGTTTAGTATCATGTCCCT+TGG | + | chr5_1:40960162-40960181 | Msa0731000:intron | 40.0% | |
| !!! | GGTCTCTGTGTTTTAGTTTC+TGG | + | chr5_1:40960183-40960202 | Msa0731000:intron | 40.0% |
| GAGAATCTAGTTGAGGCAAA+AGG | + | chr5_1:40960311-40960330 | Msa0731000:intron | 40.0% | |
| AGTTGAGGCAAAAGGAAACT+TGG | + | chr5_1:40960319-40960338 | Msa0731000:intron | 40.0% | |
| TATAGAGCAGCTATGACAAC+TGG | + | chr5_1:40960536-40960555 | Msa0731000:intron | 40.0% | |
| GTGTAGCAGGAAGTTTCTTT+GGG | - | chr5_1:40960719-40960738 | None:intergenic | 40.0% | |
| TGTGTAGCAGGAAGTTTCTT+TGG | - | chr5_1:40960720-40960739 | None:intergenic | 40.0% | |
| ! | ATCTGGAATGCTTTGATAGC+AGG | + | chr5_1:40960739-40960758 | Msa0731000:intron | 40.0% |
| ! | TCTGGAATGCTTTGATAGCA+GGG | + | chr5_1:40960740-40960759 | Msa0731000:intron | 40.0% |
| TGGATGACTACCCAAATGAA+TGG | + | chr5_1:40960872-40960891 | Msa0731000:intron | 40.0% | |
| TAAAAGACACCTTCAAAGGG+TGG | - | chr5_1:40961180-40961199 | None:intergenic | 40.0% | |
| GCACCCACCTAAAAACAATA+AGG | + | chr5_1:40961452-40961471 | Msa0731000:intron | 40.0% | |
| !! | TTTTGGGTGGATAGATGGTT+AGG | + | chr5_1:40961701-40961720 | Msa0731000:intron | 40.0% |
| GTCGCAAGATCAAATAAACG+CGG | - | chr5_1:40961752-40961771 | None:intergenic | 40.0% | |
| GTAGCAGATATGTGTTTGCT+AGG | + | chr5_1:40961788-40961807 | Msa0731000:intron | 40.0% | |
| ! | TATGTGTTTGCTAGGTTTGG+AGG | + | chr5_1:40961796-40961815 | Msa0731000:intron | 40.0% |
| !! | ATGTTTTTGACAGGTGGCAA+TGG | + | chr5_1:40961921-40961940 | Msa0731000:intron | 40.0% |
| !! | TGTTTTTGACAGGTGGCAAT+GGG | + | chr5_1:40961922-40961941 | Msa0731000:intron | 40.0% |
| !! | ATGGAAGTACCCATTGTAGA+AGG | + | chr5_1:40962001-40962020 | Msa0731000:intron | 40.0% |
| TCTTCTCCTCCTTCTACAAT+GGG | - | chr5_1:40962013-40962032 | None:intergenic | 40.0% | |
| AGAAACAATCTTCAAAGGCG+CGG | + | chr5_1:40962109-40962128 | Msa0731000:intron | 40.0% | |
| ACAATGGAGAAAGATATGGG+AGG | - | chr5_1:40962191-40962210 | None:intergenic | 40.0% | |
| GTTCTTTATGGCAACACATC+AGG | + | chr5_1:40962221-40962240 | Msa0731000:intron | 40.0% | |
| AATCTTCATTGGAGAACCTG+CGG | - | chr5_1:40957828-40957847 | None:intergenic | 40.0% | |
| GGTGCAACAATTCAATACGT+AGG | + | chr5_1:40958206-40958225 | Msa0731000:intron | 40.0% | |
| TGAAGAGTGGATAAGCTTCT+TGG | + | chr5_1:40958407-40958426 | Msa0731000:intron | 40.0% | |
| ! | CTTCTATGGGCTATTTGGAT+TGG | - | chr5_1:40958563-40958582 | None:intergenic | 40.0% |
| TCCAAATAGCCCATAGAAGA+TGG | + | chr5_1:40958564-40958583 | Msa0731000:intron | 40.0% | |
| ! | ACCATCTTCTATGGGCTATT+TGG | - | chr5_1:40958568-40958587 | None:intergenic | 40.0% |
| AATAGCCCATAGAAGATGGT+AGG | + | chr5_1:40958568-40958587 | Msa0731000:intron | 40.0% | |
| CCAAACCTACCATCTTCTAT+GGG | - | chr5_1:40958576-40958595 | None:intergenic | 40.0% | |
| TCCAAACCTACCATCTTCTA+TGG | - | chr5_1:40958577-40958596 | None:intergenic | 40.0% | |
| GTCCTTTGATACACAACTTC+GGG | + | chr5_1:40958679-40958698 | Msa0731000:intron | 40.0% | |
| ATCCCGAAGTTGTGTATCAA+AGG | - | chr5_1:40958684-40958703 | None:intergenic | 40.0% | |
| TTTGATACACAACTTCGGGA+TGG | + | chr5_1:40958683-40958702 | Msa0731000:intron | 40.0% | |
| ! | TTGCAGGTAACATCTCCTTT+TGG | + | chr5_1:40959060-40959079 | Msa0731000:intron | 40.0% |
| TACCGAGAGTGGAAATTATG+TGG | + | chr5_1:40959137-40959156 | Msa0731000:CDS | 40.0% | |
| TGCCACATAATTTCCACTCT+CGG | - | chr5_1:40959142-40959161 | None:intergenic | 40.0% | |
| ! | TTATGTGGCATGCTTTTGGA+TGG | + | chr5_1:40959152-40959171 | Msa0731000:CDS | 40.0% |
| TGACACTTACACTACCTTCA+GGG | - | chr5_1:40959188-40959207 | None:intergenic | 40.0% | |
| CTGGAATTTCAGCAAAGGAT+TGG | + | chr5_1:40959223-40959242 | Msa0731000:CDS | 40.0% | |
| !! | AGGGTGTTGAACTTGAAATC+AGG | + | chr5_1:40959382-40959401 | Msa0731000:intron | 40.0% |
| TTTAAGAGGGGAAGAATCGA+GGG | - | chr5_1:40964536-40964555 | None:intergenic | 40.0% | |
| ATTTAAGAGGGGAAGAATCG+AGG | - | chr5_1:40964537-40964556 | None:intergenic | 40.0% | |
| GTATTTGACCATGTGATGCT+CGG | + | chr5_1:40964598-40964617 | Msa0731000:intron | 40.0% | |
| GACCATTACTGAAATTCGGA+TGG | - | chr5_1:40964740-40964759 | None:intergenic | 40.0% | |
| TCGTGTAATGAAGACACTCA+AGG | - | chr5_1:40964844-40964863 | None:intergenic | 40.0% | |
| AGACCTGTTATACTTCCTCT+AGG | + | chr5_1:40964867-40964886 | Msa0731000:intron | 40.0% | |
| TGGTTTAGTATCATGTCCCT+TGG | + | chr5_1:40960162-40960181 | Msa0731000:intron | 40.0% | |
| AACTAAAACGCAGAGACCAA+GGG | - | chr5_1:40965054-40965073 | None:intergenic | 40.0% | |
| AAACTAAAACGCAGAGACCA+AGG | - | chr5_1:40965055-40965074 | None:intergenic | 40.0% | |
| GAGAATCTAGTTGAGGCAAA+AGG | + | chr5_1:40960311-40960330 | Msa0731000:intron | 40.0% | |
| AGTTGAGGCAAAAGGAAACT+TGG | + | chr5_1:40960319-40960338 | Msa0731000:intron | 40.0% | |
| AAGTCCGTAAGCATTCTGTT+AGG | - | chr5_1:40965272-40965291 | None:intergenic | 40.0% | |
| ! | ACAGAATGCTTACGGACTTT+TGG | + | chr5_1:40965273-40965292 | Msa0731000:three_prime_UTR | 40.0% |
| ! | CAGAATGCTTACGGACTTTT+GGG | + | chr5_1:40965274-40965293 | Msa0731000:three_prime_UTR | 40.0% |
| CAAAAAGAGTGAAACTCGAG+GGG | - | chr5_1:40965360-40965379 | None:intergenic | 40.0% | |
| TATAGAGCAGCTATGACAAC+TGG | + | chr5_1:40960536-40960555 | Msa0731000:intron | 40.0% | |
| !! | AGTGAGAGCACCAAAATGAT+AGG | - | chr5_1:40965544-40965563 | None:intergenic | 40.0% |
| GTGTAGCAGGAAGTTTCTTT+GGG | - | chr5_1:40960719-40960738 | None:intergenic | 40.0% | |
| TGTGTAGCAGGAAGTTTCTT+TGG | - | chr5_1:40960720-40960739 | None:intergenic | 40.0% | |
| GAAACTTCCTGCTACACATT+TGG | + | chr5_1:40965606-40965625 | Msa0731000:three_prime_UTR | 40.0% | |
| AAGCATTCCAAATGTGTAGC+AGG | - | chr5_1:40965616-40965635 | None:intergenic | 40.0% | |
| ! | TTGGAATGCTTTGATAGCAG+GGG | + | chr5_1:40965625-40965644 | Msa0731000:three_prime_UTR | 40.0% |
| ! | GAACAGGGTTTGGGTTTCTT+GGG | - | chr5_1:40955801-40955820 | None:intergenic | 45.0% |
| ! | TGGTTGACTCTTCCAAGTTC+AGG | + | chr5_1:40956014-40956033 | Msa0731000:CDS | 45.0% |
| GAGGGTTTGGGTAGTTTAAC+TGG | + | chr5_1:40956236-40956255 | Msa0731000:intron | 45.0% | |
| GGTTAAGGAGTTGGATGTTC+TGG | + | chr5_1:40956270-40956289 | Msa0731000:intron | 45.0% | |
| !! | TGGATGTTCTGGTTCAAACC+CGG | + | chr5_1:40956281-40956300 | Msa0731000:intron | 45.0% |
| TGATTAGGGGTTCGATCTAG+TGG | + | chr5_1:40956612-40956631 | Msa0731000:intron | 45.0% | |
| ! | GTTACACACGTGATAGTGAG+GGG | - | chr5_1:40956845-40956864 | None:intergenic | 45.0% |
| ! | GTGTTACACACGTGATAGTG+AGG | - | chr5_1:40956847-40956866 | None:intergenic | 45.0% |
| AACCTTTCGTATCCACCTAG+CGG | - | chr5_1:40956892-40956911 | None:intergenic | 45.0% | |
| TTAAACCGTTCCCCTTAGGT+CGG | - | chr5_1:40956916-40956935 | None:intergenic | 45.0% | |
| TCGGTTCCTACTATTGTCGT+GGG | - | chr5_1:40956952-40956971 | None:intergenic | 45.0% | |
| TTCGGTTCCTACTATTGTCG+TGG | - | chr5_1:40956953-40956972 | None:intergenic | 45.0% | |
| CCTCTCATTCCGATGTGTTT+CGG | - | chr5_1:40956971-40956990 | None:intergenic | 45.0% | |
| CGAAACACATCGGAATGAGA+GGG | + | chr5_1:40956969-40956988 | Msa0731000:intron | 45.0% | |
| CATGTAGTCCCATACCTACA+CGG | - | chr5_1:40957004-40957023 | None:intergenic | 45.0% | |
| GTATGGGACTACATGGTTGA+AGG | + | chr5_1:40957009-40957028 | Msa0731000:intron | 45.0% | |
| !! | TTTTCGGGAGCTCAATCCAT+AGG | + | chr5_1:40957083-40957102 | Msa0731000:intron | 45.0% |
| GCTTAACTGTGGAGTTCCTA+TGG | - | chr5_1:40957102-40957121 | None:intergenic | 45.0% | |
| GCTTGGAGTAGTACTAGGAT+GGG | + | chr5_1:40957129-40957148 | Msa0731000:intron | 45.0% | |
| CATGCTGAAAAGACTCGTGT+TGG | + | chr5_1:40957198-40957217 | Msa0731000:intron | 45.0% | |
| !! | AAGACTCGTGTTGGTTTGTG+GGG | + | chr5_1:40957207-40957226 | Msa0731000:intron | 45.0% |
| !! | TGTTGGTTTGTGGGGTTAGT+CGG | + | chr5_1:40957215-40957234 | Msa0731000:intron | 45.0% |
| AACCTTTCGTATCCACCTAG+CGG | - | chr5_1:40956892-40956911 | None:intergenic | 45.0% | |
| TTAAACCGTTCCCCTTAGGT+CGG | - | chr5_1:40956916-40956935 | None:intergenic | 45.0% | |
| TCGGTTCCTACTATTGTCGT+GGG | - | chr5_1:40956952-40956971 | None:intergenic | 45.0% | |
| TTCGGTTCCTACTATTGTCG+TGG | - | chr5_1:40956953-40956972 | None:intergenic | 45.0% | |
| CCTCTCATTCCGATGTGTTT+CGG | - | chr5_1:40956971-40956990 | None:intergenic | 45.0% | |
| CGAAACACATCGGAATGAGA+GGG | + | chr5_1:40956969-40956988 | Msa0731000:intron | 45.0% | |
| GTATGGGACTACATGGTTGA+AGG | + | chr5_1:40957009-40957028 | Msa0731000:intron | 45.0% | |
| !! | TTTTCGGGAGCTCAATCCAT+AGG | + | chr5_1:40957083-40957102 | Msa0731000:intron | 45.0% |
| GCTTAACTGTGGAGTTCCTA+TGG | - | chr5_1:40957102-40957121 | None:intergenic | 45.0% | |
| GCTTGGAGTAGTACTAGGAT+GGG | + | chr5_1:40957129-40957148 | Msa0731000:intron | 45.0% | |
| CATGCTGAAAAGACTCGTGT+TGG | + | chr5_1:40957198-40957217 | Msa0731000:intron | 45.0% | |
| !! | AAGACTCGTGTTGGTTTGTG+GGG | + | chr5_1:40957207-40957226 | Msa0731000:intron | 45.0% |
| ATCTTCATTGGAGAACCTGC+GGG | - | chr5_1:40957827-40957846 | None:intergenic | 45.0% | |
| GACGGGCATTCACAATTTGA+GGG | - | chr5_1:40958129-40958148 | None:intergenic | 45.0% | |
| AGACGGGCATTCACAATTTG+AGG | - | chr5_1:40958130-40958149 | None:intergenic | 45.0% | |
| CCCATAGAAGATGGTAGGTT+TGG | + | chr5_1:40958573-40958592 | Msa0731000:intron | 45.0% | |
| GCATTTACAACTACCGAGAG+TGG | + | chr5_1:40959126-40959145 | Msa0731000:CDS | 45.0% | |
| ATGGAAGGAAAACACCCTGA+AGG | + | chr5_1:40959171-40959190 | Msa0731000:CDS | 45.0% | |
| CTGACACTTACACTACCTTC+AGG | - | chr5_1:40959189-40959208 | None:intergenic | 45.0% | |
| GTGTAAGTGTCAGCCTTGAT+TGG | + | chr5_1:40959196-40959215 | Msa0731000:CDS | 45.0% | |
| GTCAGCCTTGATTGGAAAAC+TGG | + | chr5_1:40959204-40959223 | Msa0731000:CDS | 45.0% | |
| CTTGAAATCAGGAAGCTCGA+AGG | + | chr5_1:40959393-40959412 | Msa0731000:CDS | 45.0% | |
| ! | GGGAAGAATTGAGGGTTTTG+GGG | - | chr5_1:40959650-40959669 | None:intergenic | 45.0% |
| ! | GGGGAAGAATTGAGGGTTTT+GGG | - | chr5_1:40959651-40959670 | None:intergenic | 45.0% |
| ! | AGGGGAAGAATTGAGGGTTT+TGG | - | chr5_1:40959652-40959671 | None:intergenic | 45.0% |
| CTACAGGGAAGCAACAATGA+GGG | + | chr5_1:40960107-40960126 | Msa0731000:intron | 45.0% | |
| ! | AAGAGCCACTCACATCGATT+AGG | + | chr5_1:40960370-40960389 | Msa0731000:intron | 45.0% |
| ! | AGAGCCACTCACATCGATTA+GGG | + | chr5_1:40960371-40960390 | Msa0731000:intron | 45.0% |
| GAAACTTCCTGCTACACATC+TGG | + | chr5_1:40960722-40960741 | Msa0731000:intron | 45.0% | |
| AAGCATTCCAGATGTGTAGC+AGG | - | chr5_1:40960732-40960751 | None:intergenic | 45.0% | |
| ! | CTGGAATGCTTTGATAGCAG+GGG | + | chr5_1:40960741-40960760 | Msa0731000:intron | 45.0% |
| TGTTACAAGCCACCCTTTGA+AGG | + | chr5_1:40961168-40961187 | Msa0731000:intron | 45.0% | |
| AACTTCAAATGGAAGGAGGC+AGG | + | chr5_1:40961539-40961558 | Msa0731000:intron | 45.0% | |
| ACTTCAAATGGAAGGAGGCA+GGG | + | chr5_1:40961540-40961559 | Msa0731000:intron | 45.0% | |
| GAAGGAGGTAGCGAAGATTA+GGG | + | chr5_1:40961601-40961620 | Msa0731000:intron | 45.0% | |
| GCGAAGATTAGGGATGGTAT+AGG | + | chr5_1:40961611-40961630 | Msa0731000:intron | 45.0% | |
| GATTAGGGATGGTATAGGAG+AGG | + | chr5_1:40961616-40961635 | Msa0731000:intron | 45.0% | |
| TTTGCTAGGTTTGGAGGAAG+AGG | + | chr5_1:40961802-40961821 | Msa0731000:intron | 45.0% | |
| TTGCTAGGTTTGGAGGAAGA+GGG | + | chr5_1:40961803-40961822 | Msa0731000:intron | 45.0% | |
| GAGTTGGAGGAGAAGACTTT+GGG | + | chr5_1:40961835-40961854 | Msa0731000:intron | 45.0% | |
| !! | CTTGGGAGGAAGACTTGTTA+GGG | + | chr5_1:40961858-40961877 | Msa0731000:intron | 45.0% |
| !! | TTGGGAGGAAGACTTGTTAG+GGG | + | chr5_1:40961859-40961878 | Msa0731000:intron | 45.0% |
| !! | AAGACTTGTTAGGGGAGTGT+AGG | + | chr5_1:40961867-40961886 | Msa0731000:intron | 45.0% |
| !! | AGACTTGTTAGGGGAGTGTA+GGG | + | chr5_1:40961868-40961887 | Msa0731000:intron | 45.0% |
| TATAGCCTTCCTGGGGATTT+GGG | - | chr5_1:40961949-40961968 | None:intergenic | 45.0% | |
| TCTCACTGTATAGCCTTCCT+GGG | - | chr5_1:40961957-40961976 | None:intergenic | 45.0% | |
| ! | TACAGTGAGAGGTGCATATC+AGG | + | chr5_1:40961967-40961986 | Msa0731000:intron | 45.0% |
| ! | GAAGTACCCATTGTAGAAGG+AGG | + | chr5_1:40962004-40962023 | Msa0731000:intron | 45.0% |
| GTCTTCTCCTCCTTCTACAA+TGG | - | chr5_1:40962014-40962033 | None:intergenic | 45.0% | |
| AAGGAGGAGAAGACCTCATA+TGG | + | chr5_1:40962020-40962039 | Msa0731000:intron | 45.0% | |
| AGACCTCATATGGCACAAAC+AGG | + | chr5_1:40962030-40962049 | Msa0731000:intron | 45.0% | |
| GAACCTGTTTGTGCCATATG+AGG | - | chr5_1:40962036-40962055 | None:intergenic | 45.0% | |
| GCAAGGATGGAAACCTTCAA+CGG | - | chr5_1:40962058-40962077 | None:intergenic | 45.0% | |
| TGAAGGTTTCCATCCTTGCT+TGG | + | chr5_1:40962059-40962078 | Msa0731000:intron | 45.0% | |
| ! | GCGCCTTTGAAGATTGTTTC+TGG | - | chr5_1:40962110-40962129 | None:intergenic | 45.0% |
| ACAGACATCACGTGTTTACC+AGG | + | chr5_1:40962145-40962164 | Msa0731000:intron | 45.0% | |
| ATGGAGAAAGATATGGGAGG+CGG | - | chr5_1:40962188-40962207 | None:intergenic | 45.0% | |
| ATCTTCATTGGAGAACCTGC+GGG | - | chr5_1:40957827-40957846 | None:intergenic | 45.0% | |
| GACGGGCATTCACAATTTGA+GGG | - | chr5_1:40958129-40958148 | None:intergenic | 45.0% | |
| AGACGGGCATTCACAATTTG+AGG | - | chr5_1:40958130-40958149 | None:intergenic | 45.0% | |
| CCCATAGAAGATGGTAGGTT+TGG | + | chr5_1:40958573-40958592 | Msa0731000:intron | 45.0% | |
| GCATTTACAACTACCGAGAG+TGG | + | chr5_1:40959126-40959145 | Msa0731000:CDS | 45.0% | |
| ATGGAAGGAAAACACCCTGA+AGG | + | chr5_1:40959171-40959190 | Msa0731000:CDS | 45.0% | |
| CTGACACTTACACTACCTTC+AGG | - | chr5_1:40959189-40959208 | None:intergenic | 45.0% | |
| GTGTAAGTGTCAGCCTTGAT+TGG | + | chr5_1:40959196-40959215 | Msa0731000:CDS | 45.0% | |
| GTCAGCCTTGATTGGAAAAC+TGG | + | chr5_1:40959204-40959223 | Msa0731000:CDS | 45.0% | |
| CTTGAAATCAGGAAGCTCGA+AGG | + | chr5_1:40959393-40959412 | Msa0731000:CDS | 45.0% | |
| AAACAAATGCTCGAGTCGCT+TGG | + | chr5_1:40965015-40965034 | Msa0731000:CDS | 45.0% | |
| !!! | GGTCTCTGCGTTTTAGTTTC+TGG | + | chr5_1:40965056-40965075 | Msa0731000:CDS | 45.0% |
| !! | AAGAGGCACTCACATCGATT+AGG | + | chr5_1:40965243-40965262 | Msa0731000:three_prime_UTR | 45.0% |
| !! | AGAGGCACTCACATCGATTA+GGG | + | chr5_1:40965244-40965263 | Msa0731000:three_prime_UTR | 45.0% |
| ! | TTTGGGTTTCTTGGGAGGGT+AGG | - | chr5_1:40955793-40955812 | None:intergenic | 50.0% |
| ! | AGGGTTTGGGTTTCTTGGGA+GGG | - | chr5_1:40955797-40955816 | None:intergenic | 50.0% |
| ! | GGAACAGGGTTTGGGTTTCT+TGG | - | chr5_1:40955802-40955821 | None:intergenic | 50.0% |
| GGTCAAAGTCCCCTACTACT+TGG | - | chr5_1:40956581-40956600 | None:intergenic | 50.0% | |
| GAACTCGTTACTTAGGGTCC+TGG | - | chr5_1:40956643-40956662 | None:intergenic | 50.0% | |
| TTTGCACCACCAGCTCAAAG+AGG | - | chr5_1:40956785-40956804 | None:intergenic | 50.0% | |
| GATATCGAAAGCCACGACGT+GGG | - | chr5_1:40956869-40956888 | None:intergenic | 50.0% | |
| ACCTTTCGTATCCACCTAGC+GGG | - | chr5_1:40956891-40956910 | None:intergenic | 50.0% | |
| TACGAAAGGTTCCCGACCTA+AGG | + | chr5_1:40956901-40956920 | Msa0731000:intron | 50.0% | |
| ACGAAAGGTTCCCGACCTAA+GGG | + | chr5_1:40956902-40956921 | Msa0731000:intron | 50.0% | |
| TAAACCGTTCCCCTTAGGTC+GGG | - | chr5_1:40956915-40956934 | None:intergenic | 50.0% | |
| GGTTCCTACTATTGTCGTGG+GGG | - | chr5_1:40956950-40956969 | None:intergenic | 50.0% | |
| CGGTTCCTACTATTGTCGTG+GGG | - | chr5_1:40956951-40956970 | None:intergenic | 50.0% | |
| CCGAAACACATCGGAATGAG+AGG | + | chr5_1:40956968-40956987 | Msa0731000:intron | 50.0% | |
| ACATCGGAATGAGAGGGATC+CGG | + | chr5_1:40956975-40956994 | Msa0731000:intron | 50.0% | |
| CGTGTAGGTATGGGACTACA+TGG | + | chr5_1:40957002-40957021 | Msa0731000:intron | 50.0% | |
| GGGACTACATGGTTGAAGGA+AGG | + | chr5_1:40957013-40957032 | Msa0731000:intron | 50.0% | |
| ACTCCACAGTTAAGCGTGCT+TGG | + | chr5_1:40957107-40957126 | Msa0731000:intron | 50.0% | |
| AAGCCAAGCACGCTTAACTG+TGG | - | chr5_1:40957113-40957132 | None:intergenic | 50.0% | |
| ACAGTTAAGCGTGCTTGGCT+TGG | + | chr5_1:40957112-40957131 | Msa0731000:intron | 50.0% | |
| !! | GCTTGGCTTGGAGTAGTACT+AGG | + | chr5_1:40957124-40957143 | Msa0731000:intron | 50.0% |
| GGCTTGGAGTAGTACTAGGA+TGG | + | chr5_1:40957128-40957147 | Msa0731000:intron | 50.0% | |
| TACTAGGATGGGTGACCTAC+CGG | + | chr5_1:40957140-40957159 | Msa0731000:intron | 50.0% | |
| ATGCTTACCGGGAAACTTCC+CGG | - | chr5_1:40957162-40957181 | None:intergenic | 50.0% | |
| TCCTCACTCACATGCTTACC+GGG | - | chr5_1:40957173-40957192 | None:intergenic | 50.0% | |
| GTCCTCACTCACATGCTTAC+CGG | - | chr5_1:40957174-40957193 | None:intergenic | 50.0% | |
| !! | GGGTTAGTCGGCAATCATGT+AGG | + | chr5_1:40957227-40957246 | Msa0731000:intron | 50.0% |
| GGCAATCATGTAGGCAGTCT+GGG | + | chr5_1:40957236-40957255 | Msa0731000:intron | 50.0% | |
| ! | GCAGTCTGGGATGTTACACT+TGG | + | chr5_1:40957249-40957268 | Msa0731000:intron | 50.0% |
| GATATCGAAAGCCACGACGT+GGG | - | chr5_1:40956869-40956888 | None:intergenic | 50.0% | |
| ACCTTTCGTATCCACCTAGC+GGG | - | chr5_1:40956891-40956910 | None:intergenic | 50.0% | |
| TACGAAAGGTTCCCGACCTA+AGG | + | chr5_1:40956901-40956920 | Msa0731000:intron | 50.0% | |
| ACGAAAGGTTCCCGACCTAA+GGG | + | chr5_1:40956902-40956921 | Msa0731000:intron | 50.0% | |
| TAAACCGTTCCCCTTAGGTC+GGG | - | chr5_1:40956915-40956934 | None:intergenic | 50.0% | |
| GGTTCCTACTATTGTCGTGG+GGG | - | chr5_1:40956950-40956969 | None:intergenic | 50.0% | |
| CGGTTCCTACTATTGTCGTG+GGG | - | chr5_1:40956951-40956970 | None:intergenic | 50.0% | |
| CCGAAACACATCGGAATGAG+AGG | + | chr5_1:40956968-40956987 | Msa0731000:intron | 50.0% | |
| ACATCGGAATGAGAGGGATC+CGG | + | chr5_1:40956975-40956994 | Msa0731000:intron | 50.0% | |
| CATGTAGTCCCATACCTACG+CGG | - | chr5_1:40957482-40957501 | None:intergenic | 50.0% | |
| GGGACTACATGGTTGAAGGA+AGG | + | chr5_1:40957013-40957032 | Msa0731000:intron | 50.0% | |
| ACTCCACAGTTAAGCGTGCT+TGG | + | chr5_1:40957107-40957126 | Msa0731000:intron | 50.0% | |
| AAGCCAAGCACGCTTAACTG+TGG | - | chr5_1:40957113-40957132 | None:intergenic | 50.0% | |
| ACAGTTAAGCGTGCTTGGCT+TGG | + | chr5_1:40957112-40957131 | Msa0731000:intron | 50.0% | |
| !! | GCTTGGCTTGGAGTAGTACT+AGG | + | chr5_1:40957124-40957143 | Msa0731000:intron | 50.0% |
| GGCTTGGAGTAGTACTAGGA+TGG | + | chr5_1:40957128-40957147 | Msa0731000:intron | 50.0% | |
| TACTAGGATGGGTGACCTAC+CGG | + | chr5_1:40957140-40957159 | Msa0731000:intron | 50.0% | |
| ATGCTTACCGGGAAACTTCC+CGG | - | chr5_1:40957162-40957181 | None:intergenic | 50.0% | |
| TCCTCACTCACATGCTTACC+GGG | - | chr5_1:40957173-40957192 | None:intergenic | 50.0% | |
| GTCCTCACTCACATGCTTAC+CGG | - | chr5_1:40957174-40957193 | None:intergenic | 50.0% | |
| !! | TGTTGGTTTGTGGGGTCAGT+CGG | + | chr5_1:40957693-40957712 | Msa0731000:intron | 50.0% |
| TAACATCCCAGACTGCCTAC+AGG | - | chr5_1:40957245-40957264 | None:intergenic | 50.0% | |
| CTAGGGGAGCTTATGAAGAG+TGG | + | chr5_1:40958394-40958413 | Msa0731000:intron | 50.0% | |
| ! | GTGGCATGCTTTTGGATGGA+AGG | + | chr5_1:40959156-40959175 | Msa0731000:CDS | 50.0% |
| ATCTCGAACCGAGCATCACA+TGG | - | chr5_1:40959730-40959749 | None:intergenic | 50.0% | |
| ! | TGTGATGCTCGGTTCGAGAT+TGG | + | chr5_1:40959730-40959749 | Msa0731000:intron | 50.0% |
| GCTTCCCTGTAGCAATGTCA+AGG | - | chr5_1:40960099-40960118 | None:intergenic | 50.0% | |
| GCTACAGGGAAGCAACAATG+AGG | + | chr5_1:40960106-40960125 | Msa0731000:intron | 50.0% | |
| TCGATGTGAGTGGCTCTTCT+TGG | - | chr5_1:40960368-40960387 | None:intergenic | 50.0% | |
| ! | GAATGCTTTGATAGCAGGGG+AGG | + | chr5_1:40960744-40960763 | Msa0731000:intron | 50.0% |
| GTTAGCAAGCTACACCCACT+TGG | + | chr5_1:40961480-40961499 | Msa0731000:intron | 50.0% | |
| GGAAGGAGGTAGCGAAGATT+AGG | + | chr5_1:40961600-40961619 | Msa0731000:intron | 50.0% | |
| GAGGTAGCGAAGATTAGGGA+TGG | + | chr5_1:40961605-40961624 | Msa0731000:intron | 50.0% | |
| ! | ATGGTATAGGAGAGGCGCAT+GGG | + | chr5_1:40961624-40961643 | Msa0731000:intron | 50.0% |
| CGCGGATATCTCAGATGCAA+AGG | - | chr5_1:40961734-40961753 | None:intergenic | 50.0% | |
| GGAGTTGGAGGAGAAGACTT+TGG | + | chr5_1:40961834-40961853 | Msa0731000:intron | 50.0% | |
| GAGGAGAAGACTTTGGGCTT+GGG | + | chr5_1:40961841-40961860 | Msa0731000:intron | 50.0% | |
| ! | GCTTGGGAGGAAGACTTGTT+AGG | + | chr5_1:40961857-40961876 | Msa0731000:intron | 50.0% |
| GTATAGCCTTCCTGGGGATT+TGG | - | chr5_1:40961950-40961969 | None:intergenic | 50.0% | |
| CTCACTGTATAGCCTTCCTG+GGG | - | chr5_1:40961956-40961975 | None:intergenic | 50.0% | |
| CTCTCACTGTATAGCCTTCC+TGG | - | chr5_1:40961958-40961977 | None:intergenic | 50.0% | |
| CAGGAAGGCTATACAGTGAG+AGG | + | chr5_1:40961956-40961975 | Msa0731000:intron | 50.0% | |
| GCACAAACAGGTTCCGTTGA+AGG | + | chr5_1:40962042-40962061 | Msa0731000:intron | 50.0% | |
| CAACAAACGCCAAGCAAGGA+TGG | - | chr5_1:40962071-40962090 | None:intergenic | 50.0% | |
| CCTTCAACAAACGCCAAGCA+AGG | - | chr5_1:40962075-40962094 | None:intergenic | 50.0% | |
| ! | CCTTGCTTGGCGTTTGTTGA+AGG | + | chr5_1:40962072-40962091 | Msa0731000:intron | 50.0% |
| ! | CTTGGCGTTTGTTGAAGGAC+AGG | + | chr5_1:40962077-40962096 | Msa0731000:intron | 50.0% |
| ATCACGTGTTTACCAGGCTG+CGG | + | chr5_1:40962151-40962170 | Msa0731000:intron | 50.0% | |
| TATGGCAACACATCAGGTCG+TGG | + | chr5_1:40962227-40962246 | Msa0731000:intron | 50.0% | |
| CAACACATCAGGTCGTGGAT+TGG | + | chr5_1:40962232-40962251 | Msa0731000:intron | 50.0% | |
| !! | AGGTCGTGGATTGGCATTTC+TGG | + | chr5_1:40962241-40962260 | Msa0731000:intron | 50.0% |
| GAACTCGTTACTTAGGGTCC+TGG | - | chr5_1:40956643-40956662 | None:intergenic | 50.0% | |
| TTTGCACCACCAGCTCAAAG+AGG | - | chr5_1:40956785-40956804 | None:intergenic | 50.0% | |
| ATGAGGAGGTTCAGGGAGTT+CGG | + | chr5_1:40962598-40962617 | Msa0731000:intron | 50.0% | |
| CTAGGGGAGCTTATGAAGAG+TGG | + | chr5_1:40958394-40958413 | Msa0731000:intron | 50.0% | |
| ! | GTGGCATGCTTTTGGATGGA+AGG | + | chr5_1:40959156-40959175 | Msa0731000:CDS | 50.0% |
| CAGGAAGCTCGAAGGAATAG+TGG | + | chr5_1:40959401-40959420 | Msa0731000:CDS | 50.0% | |
| ! | GGGAAGAATCGAGGGTTTTG+AGG | - | chr5_1:40964528-40964547 | None:intergenic | 50.0% |
| ATCTCGAACCGAGCATCACA+TGG | - | chr5_1:40959730-40959749 | None:intergenic | 50.0% | |
| ! | TGTGATGCTCGGTTCGAGAT+TGG | + | chr5_1:40959730-40959749 | Msa0731000:intron | 50.0% |
| GCTTCCCTGTAGCAATGTCA+AGG | - | chr5_1:40960099-40960118 | None:intergenic | 50.0% | |
| CTACAGGGAAGCAACGATGA+GGG | + | chr5_1:40964980-40964999 | Msa0731000:intron | 50.0% | |
| TCGATGTGAGTGCCTCTTCT+TGG | - | chr5_1:40965241-40965260 | None:intergenic | 50.0% | |
| GGCGCCTAACAGAATGCTTA+CGG | + | chr5_1:40960392-40960411 | Msa0731000:intron | 50.0% | |
| ACATATGGCTTGAGCCGTGA+AGG | + | chr5_1:40965310-40965329 | Msa0731000:three_prime_UTR | 50.0% | |
| CATATGGCTTGAGCCGTGAA+GGG | + | chr5_1:40965311-40965330 | Msa0731000:three_prime_UTR | 50.0% | |
| ! | CAGGGTTTGGGTTTCTTGGG+AGG | - | chr5_1:40955798-40955817 | None:intergenic | 55.0% |
| TTCGATCTAGTGGCGTTGCC+AGG | + | chr5_1:40956622-40956641 | Msa0731000:intron | 55.0% | |
| TGGTTTCGGCCTCTTTGAGC+TGG | + | chr5_1:40956773-40956792 | Msa0731000:intron | 55.0% | |
| TTTCGGCCTCTTTGAGCTGG+TGG | + | chr5_1:40956776-40956795 | Msa0731000:intron | 55.0% | |
| GGATATCGAAAGCCACGACG+TGG | - | chr5_1:40956870-40956889 | None:intergenic | 55.0% | |
| GTGGCTTTCGATATCCCGCT+AGG | + | chr5_1:40956874-40956893 | Msa0731000:intron | 55.0% | |
| GCTTTCGATATCCCGCTAGG+TGG | + | chr5_1:40956877-40956896 | Msa0731000:intron | 55.0% | |
| TCCCGCTAGGTGGATACGAA+AGG | + | chr5_1:40956887-40956906 | Msa0731000:intron | 55.0% | |
| CGAAAGGTTCCCGACCTAAG+GGG | + | chr5_1:40956903-40956922 | Msa0731000:intron | 55.0% | |
| CGGCTTAAACCGTTCCCCTT+AGG | - | chr5_1:40956920-40956939 | None:intergenic | 55.0% | |
| GGGAACGGTTTAAGCCGCAA+GGG | + | chr5_1:40956923-40956942 | Msa0731000:intron | 55.0% | |
| ACTAGGATGGGTGACCTACC+GGG | + | chr5_1:40957141-40957160 | Msa0731000:intron | 55.0% | |
| TGACCTACCGGGAAGTTTCC+CGG | + | chr5_1:40957152-40957171 | Msa0731000:intron | 55.0% | |
| TTACCGGGAAACTTCCCGGT+AGG | - | chr5_1:40957158-40957177 | None:intergenic | 55.0% | |
| TCCCGGTAAGCATGTGAGTG+AGG | + | chr5_1:40957169-40957188 | Msa0731000:intron | 55.0% | |
| CGGCAATCATGTAGGCAGTC+TGG | + | chr5_1:40957235-40957254 | Msa0731000:intron | 55.0% | |
| AGAGCAGACCTCTCCCAGTA+CGG | + | chr5_1:40957276-40957295 | Msa0731000:intron | 55.0% | |
| TCTCCCAGTACGGTGTGGTT+CGG | + | chr5_1:40957286-40957305 | Msa0731000:intron | 55.0% | |
| GGATATCGAAAGCCACGACG+TGG | - | chr5_1:40956870-40956889 | None:intergenic | 55.0% | |
| GTGGCTTTCGATATCCCGCT+AGG | + | chr5_1:40956874-40956893 | Msa0731000:intron | 55.0% | |
| GCTTTCGATATCCCGCTAGG+TGG | + | chr5_1:40956877-40956896 | Msa0731000:intron | 55.0% | |
| TCCCGCTAGGTGGATACGAA+AGG | + | chr5_1:40956887-40956906 | Msa0731000:intron | 55.0% | |
| CGAAAGGTTCCCGACCTAAG+GGG | + | chr5_1:40956903-40956922 | Msa0731000:intron | 55.0% | |
| CGGCTTAAACCGTTCCCCTT+AGG | - | chr5_1:40956920-40956939 | None:intergenic | 55.0% | |
| GGGAACGGTTTAAGCCGCAA+GGG | + | chr5_1:40956923-40956942 | Msa0731000:intron | 55.0% | |
| CGCGTAGGTATGGGACTACA+TGG | + | chr5_1:40957480-40957499 | Msa0731000:intron | 55.0% | |
| ACTAGGATGGGTGACCTACC+GGG | + | chr5_1:40957141-40957160 | Msa0731000:intron | 55.0% | |
| TGACCTACCGGGAAGTTTCC+CGG | + | chr5_1:40957152-40957171 | Msa0731000:intron | 55.0% | |
| TTACCGGGAAACTTCCCGGT+AGG | - | chr5_1:40957158-40957177 | None:intergenic | 55.0% | |
| TCCCGGTAAGCATGTGAGTG+AGG | + | chr5_1:40957169-40957188 | Msa0731000:intron | 55.0% | |
| GGCAATCCTGTAGGCAGTCT+GGG | + | chr5_1:40957714-40957733 | Msa0731000:intron | 55.0% | |
| ! | GGCAGTCTGGGATGTTACAC+TGG | + | chr5_1:40957248-40957267 | Msa0731000:intron | 55.0% |
| GAGGATCCACGTTGCAGTGA+GGG | + | chr5_1:40960763-40960782 | Msa0731000:intron | 55.0% | |
| TCAAATGGAAGGAGGCAGGG+AGG | + | chr5_1:40961543-40961562 | Msa0731000:intron | 55.0% | |
| TCCACCACGGTGAAACACTC+CGG | - | chr5_1:40961583-40961602 | None:intergenic | 55.0% | |
| ! | GAGTGTTTCACCGTGGTGGA+AGG | + | chr5_1:40961583-40961602 | Msa0731000:intron | 55.0% |
| ! | TGTTTCACCGTGGTGGAAGG+AGG | + | chr5_1:40961586-40961605 | Msa0731000:intron | 55.0% |
| TTCGCTACCTCCTTCCACCA+CGG | - | chr5_1:40961596-40961615 | None:intergenic | 55.0% | |
| ! | GATGGTATAGGAGAGGCGCA+TGG | + | chr5_1:40961623-40961642 | Msa0731000:intron | 55.0% |
| ! | TGGTATAGGAGAGGCGCATG+GGG | + | chr5_1:40961625-40961644 | Msa0731000:intron | 55.0% |
| GGAGGGTCTCGAAGGTGATA+GGG | + | chr5_1:40961660-40961679 | Msa0731000:intron | 55.0% | |
| GAGGGTCTCGAAGGTGATAG+GGG | + | chr5_1:40961661-40961680 | Msa0731000:intron | 55.0% | |
| GTCTCGAAGGTGATAGGGGA+TGG | + | chr5_1:40961665-40961684 | Msa0731000:intron | 55.0% | |
| AGGTTTGGAGGAAGAGGGAG+AGG | + | chr5_1:40961808-40961827 | Msa0731000:intron | 55.0% | |
| GGAGGAGAAGACTTTGGGCT+TGG | + | chr5_1:40961840-40961859 | Msa0731000:intron | 55.0% | |
| GAGAAGACTTTGGGCTTGGG+AGG | + | chr5_1:40961844-40961863 | Msa0731000:intron | 55.0% | |
| ACGTGATGTCTGTAGCCGCA+AGG | - | chr5_1:40962138-40962157 | None:intergenic | 55.0% | |
| GTGTTTACCAGGCTGCGGTA+TGG | + | chr5_1:40962156-40962175 | Msa0731000:intron | 55.0% | |
| TTTACCAGGCTGCGGTATGG+AGG | + | chr5_1:40962159-40962178 | Msa0731000:intron | 55.0% | |
| TCATTCTCTCGGCCACTCGA+AGG | + | chr5_1:40962306-40962325 | Msa0731000:intron | 55.0% | |
| !! | CTTTACTCGAAGGCGTTGCC+AGG | + | chr5_1:40962406-40962425 | Msa0731000:intron | 55.0% |
| TGGTTTCGGCCTCTTTGAGC+TGG | + | chr5_1:40956773-40956792 | Msa0731000:intron | 55.0% | |
| TTTCGGCCTCTTTGAGCTGG+TGG | + | chr5_1:40956776-40956795 | Msa0731000:intron | 55.0% | |
| CTGAACCCCTCACTATCACG+TGG | + | chr5_1:40956837-40956856 | Msa0731000:intron | 55.0% | |
| ! | ACGGAGCCACGTGATAGTGA+GGG | - | chr5_1:40962630-40962649 | None:intergenic | 55.0% |
| GCTACAGGGAAGCAACGATG+AGG | + | chr5_1:40964979-40964998 | Msa0731000:intron | 55.0% | |
| CGTGTGTAACACCCACGTCG+TGG | + | chr5_1:40956855-40956874 | Msa0731000:intron | 60.0% | |
| GGTTCCCGACCTAAGGGGAA+CGG | + | chr5_1:40956908-40956927 | Msa0731000:intron | 60.0% | |
| GGGGAACGGTTTAAGCCGCA+AGG | + | chr5_1:40956922-40956941 | Msa0731000:intron | 60.0% | |
| ATTGTCGTGGGGGTCCCTTG+CGG | - | chr5_1:40956940-40956959 | None:intergenic | 60.0% | |
| GGGACCCCCACGACAATAGT+AGG | + | chr5_1:40956943-40956962 | Msa0731000:intron | 60.0% | |
| TCGGAATGAGAGGGATCCGG+AGG | + | chr5_1:40956978-40956997 | Msa0731000:intron | 60.0% | |
| ATCCGGAGGCCGTGTAGGTA+TGG | + | chr5_1:40956992-40957011 | Msa0731000:intron | 60.0% | |
| TCCGGAGGCCGTGTAGGTAT+GGG | + | chr5_1:40956993-40957012 | Msa0731000:intron | 60.0% | |
| TCCCATACCTACACGGCCTC+CGG | - | chr5_1:40956997-40957016 | None:intergenic | 60.0% | |
| AGACCTCTCCCAGTACGGTG+TGG | + | chr5_1:40957281-40957300 | Msa0731000:intron | 60.0% | |
| GAACCACACCGTACTGGGAG+AGG | - | chr5_1:40957287-40957306 | None:intergenic | 60.0% | |
| CTCCCAGTACGGTGTGGTTC+GGG | + | chr5_1:40957287-40957306 | Msa0731000:intron | 60.0% | |
| TCCCAGTACGGTGTGGTTCG+GGG | + | chr5_1:40957288-40957307 | Msa0731000:intron | 60.0% | |
| TCCCCGAACCACACCGTACT+GGG | - | chr5_1:40957292-40957311 | None:intergenic | 60.0% | |
| GGCATGTAACACCCACGTCG+TGG | + | chr5_1:40957333-40957352 | Msa0731000:intron | 60.0% | |
| GGTTCCCGACCTAAGGGGAA+CGG | + | chr5_1:40956908-40956927 | Msa0731000:intron | 60.0% | |
| GGGGAACGGTTTAAGCCGCA+AGG | + | chr5_1:40956922-40956941 | Msa0731000:intron | 60.0% | |
| ATTGTCGTGGGGGTCCCTTG+CGG | - | chr5_1:40956940-40956959 | None:intergenic | 60.0% | |
| GGGACCCCCACGACAATAGT+AGG | + | chr5_1:40956943-40956962 | Msa0731000:intron | 60.0% | |
| TCGGAATGAGAGGGATCCGG+AGG | + | chr5_1:40956978-40956997 | Msa0731000:intron | 60.0% | |
| GGGTCAGTCGGCAATCCTGT+AGG | + | chr5_1:40957705-40957724 | Msa0731000:intron | 60.0% | |
| CGGCAATCCTGTAGGCAGTC+TGG | + | chr5_1:40957713-40957732 | Msa0731000:intron | 60.0% | |
| ATCCATACCGTGTGTCCCGC+AGG | + | chr5_1:40957809-40957828 | Msa0731000:intron | 60.0% | |
| AACCTGCGGGACACACGGTA+TGG | - | chr5_1:40957814-40957833 | None:intergenic | 60.0% | |
| TGGAGAACCTGCGGGACACA+CGG | - | chr5_1:40957819-40957838 | None:intergenic | 60.0% | |
| GGCGCCCTAATCGATGTGAG+TGG | - | chr5_1:40960378-40960397 | None:intergenic | 60.0% | |
| GGAGGATCCACGTTGCAGTG+AGG | + | chr5_1:40960762-40960781 | Msa0731000:intron | 60.0% | |
| TGCACACCCTCACTGCAACG+TGG | - | chr5_1:40960772-40960791 | None:intergenic | 60.0% | |
| ATGGAAGGAGGCAGGGAGGT+TGG | + | chr5_1:40961547-40961566 | Msa0731000:intron | 60.0% | |
| AGGCAGGGAGGTTGGAGGTT+GGG | + | chr5_1:40961555-40961574 | Msa0731000:intron | 60.0% | |
| ! | GGTATAGGAGAGGCGCATGG+GGG | + | chr5_1:40961626-40961645 | Msa0731000:intron | 60.0% |
| ! | GTTTGCTGGGAGGGTCTCGA+AGG | + | chr5_1:40961652-40961671 | Msa0731000:intron | 60.0% |
| GGGAGGGTCTCGAAGGTGAT+AGG | + | chr5_1:40961659-40961678 | Msa0731000:intron | 60.0% | |
| ! | AAGAGGGAGAGGCGTGGAGT+TGG | + | chr5_1:40961819-40961838 | Msa0731000:intron | 60.0% |
| GCAATGGGACCCAAATCCCC+AGG | + | chr5_1:40961937-40961956 | Msa0731000:intron | 60.0% | |
| TGGGACCCAAATCCCCAGGA+AGG | + | chr5_1:40961941-40961960 | Msa0731000:intron | 60.0% | |
| ! | TCAAAGGCGCGGCATCCTTG+CGG | + | chr5_1:40962120-40962139 | Msa0731000:intron | 60.0% |
| GTTTCCTCCATACCGCAGCC+TGG | - | chr5_1:40962166-40962185 | None:intergenic | 60.0% | |
| AAGATCGTCGCGCCTTCGAG+TGG | - | chr5_1:40962321-40962340 | None:intergenic | 60.0% | |
| ! | CGGAGCCACGTGATAGTGAG+GGG | - | chr5_1:40962629-40962648 | None:intergenic | 60.0% |
| ! | GACGGAGCCACGTGATAGTG+AGG | - | chr5_1:40962631-40962650 | None:intergenic | 60.0% |
| ATCCATACCGTGTGTCCCGC+AGG | + | chr5_1:40957809-40957828 | Msa0731000:intron | 60.0% | |
| AACCTGCGGGACACACGGTA+TGG | - | chr5_1:40957814-40957833 | None:intergenic | 60.0% | |
| TGGAGAACCTGCGGGACACA+CGG | - | chr5_1:40957819-40957838 | None:intergenic | 60.0% | |
| GTCCCCGAACCACACCGTAC+TGG | - | chr5_1:40957293-40957312 | None:intergenic | 65.0% | |
| ! | GTGTGGTTCGGGGACGAACC+AGG | + | chr5_1:40957298-40957317 | Msa0731000:intron | 65.0% |
| ! | TGGTTCGGGGACGAACCAGG+CGG | + | chr5_1:40957301-40957320 | Msa0731000:intron | 65.0% |
| ACGAACCAGGCGGAAGCTGG+TGG | + | chr5_1:40957311-40957330 | Msa0731000:intron | 65.0% | |
| CGAACCAGGCGGAAGCTGGT+GGG | + | chr5_1:40957312-40957331 | Msa0731000:intron | 65.0% | |
| ATCCGGAGGCCGCGTAGGTA+TGG | + | chr5_1:40957470-40957489 | Msa0731000:intron | 65.0% | |
| TCCGGAGGCCGCGTAGGTAT+GGG | + | chr5_1:40957471-40957490 | Msa0731000:intron | 65.0% | |
| TCCCATACCTACGCGGCCTC+CGG | - | chr5_1:40957475-40957494 | None:intergenic | 65.0% | |
| GAAGGAGGCAGGGAGGTTGG+AGG | + | chr5_1:40961550-40961569 | Msa0731000:intron | 65.0% | |
| GAGGCAGGGAGGTTGGAGGT+TGG | + | chr5_1:40961554-40961573 | Msa0731000:intron | 65.0% | |
| GGCAGGGAGGTTGGAGGTTG+GGG | + | chr5_1:40961556-40961575 | Msa0731000:intron | 65.0% | |
| GCAGGGAGGTTGGAGGTTGG+GGG | + | chr5_1:40961557-40961576 | Msa0731000:intron | 65.0% | |
| ! | GCCGGAGTGTTTCACCGTGG+TGG | + | chr5_1:40961579-40961598 | Msa0731000:intron | 65.0% |
| !! | CGCATGGGGGCTGGTTTGCT+GGG | + | chr5_1:40961639-40961658 | Msa0731000:intron | 65.0% |
| !! | ATGGGGGCTGGTTTGCTGGG+AGG | + | chr5_1:40961642-40961661 | Msa0731000:intron | 65.0% |
| !! | TGGGGGCTGGTTTGCTGGGA+GGG | + | chr5_1:40961643-40961662 | Msa0731000:intron | 65.0% |
| TGGAGGAAGAGGGAGAGGCG+TGG | + | chr5_1:40961813-40961832 | Msa0731000:intron | 65.0% | |
| ! | AGGGAGAGGCGTGGAGTTGG+AGG | + | chr5_1:40961822-40961841 | Msa0731000:intron | 65.0% |
| GAGGGATCCGGAGGCCGTGT+AGG | + | chr5_1:40956987-40957006 | Msa0731000:intron | 70.0% | |
| GGGACGAACCAGGCGGAAGC+TGG | + | chr5_1:40957308-40957327 | Msa0731000:intron | 70.0% | |
| CATGCCCACCAGCTTCCGCC+TGG | - | chr5_1:40957319-40957338 | None:intergenic | 70.0% | |
| GGAGGTTGGAGGTTGGGGGC+CGG | + | chr5_1:40961561-40961580 | Msa0731000:intron | 70.0% | |
| ! | GGGGCCGGAGTGTTTCACCG+TGG | + | chr5_1:40961576-40961595 | Msa0731000:intron | 70.0% |
| ! | TAGGAGAGGCGCATGGGGGC+TGG | + | chr5_1:40961630-40961649 | Msa0731000:intron | 70.0% |
| !! | GCGCATGGGGGCTGGTTTGC+TGG | + | chr5_1:40961638-40961657 | Msa0731000:intron | 70.0% |
| GAGGGATCCGGAGGCCGCGT+AGG | + | chr5_1:40957465-40957484 | Msa0731000:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 40955760 | 40965739 | 40955760 | ID=Msa0731000;Name=Msa0731000 |
| chr5_1 | mRNA | 40955760 | 40965739 | 40955760 | ID=Msa0731000-mRNA-1;Parent=Msa0731000;Name=Msa0731000-mRNA-1;_AED=0.22;_eAED=0.22;_QI=167|0.85|0.87|1|0.85|0.75|8|588|314 |
| chr5_1 | exon | 40955760 | 40956133 | 40955760 | ID=Msa0731000-mRNA-1:exon:11929;Parent=Msa0731000-mRNA-1 |
| chr5_1 | exon | 40959066 | 40959275 | 40959066 | ID=Msa0731000-mRNA-1:exon:11930;Parent=Msa0731000-mRNA-1 |
| chr5_1 | exon | 40959384 | 40959460 | 40959384 | ID=Msa0731000-mRNA-1:exon:11931;Parent=Msa0731000-mRNA-1 |
| chr5_1 | exon | 40960113 | 40960131 | 40960113 | ID=Msa0731000-mRNA-1:exon:11932;Parent=Msa0731000-mRNA-1 |
| chr5_1 | exon | 40963952 | 40964161 | 40963952 | ID=Msa0731000-mRNA-1:exon:11933;Parent=Msa0731000-mRNA-1 |
| chr5_1 | exon | 40964269 | 40964345 | 40964269 | ID=Msa0731000-mRNA-1:exon:11934;Parent=Msa0731000-mRNA-1 |
| chr5_1 | exon | 40964986 | 40965376 | 40964986 | ID=Msa0731000-mRNA-1:exon:11935;Parent=Msa0731000-mRNA-1 |
| chr5_1 | exon | 40965398 | 40965739 | 40965398 | ID=Msa0731000-mRNA-1:exon:11936;Parent=Msa0731000-mRNA-1 |
| chr5_1 | five_prime_UTR | 40955760 | 40955926 | 40955760 | ID=Msa0731000-mRNA-1:five_prime_utr;Parent=Msa0731000-mRNA-1 |
| chr5_1 | CDS | 40955927 | 40956133 | 40955927 | ID=Msa0731000-mRNA-1:cds;Parent=Msa0731000-mRNA-1 |
| chr5_1 | CDS | 40959066 | 40959275 | 40959066 | ID=Msa0731000-mRNA-1:cds;Parent=Msa0731000-mRNA-1 |
| chr5_1 | CDS | 40959384 | 40959460 | 40959384 | ID=Msa0731000-mRNA-1:cds;Parent=Msa0731000-mRNA-1 |
| chr5_1 | CDS | 40960113 | 40960131 | 40960113 | ID=Msa0731000-mRNA-1:cds;Parent=Msa0731000-mRNA-1 |
| chr5_1 | CDS | 40963952 | 40964161 | 40963952 | ID=Msa0731000-mRNA-1:cds;Parent=Msa0731000-mRNA-1 |
| chr5_1 | CDS | 40964269 | 40964345 | 40964269 | ID=Msa0731000-mRNA-1:cds;Parent=Msa0731000-mRNA-1 |
| chr5_1 | CDS | 40964986 | 40965130 | 40964986 | ID=Msa0731000-mRNA-1:cds;Parent=Msa0731000-mRNA-1 |
| chr5_1 | three_prime_UTR | 40965131 | 40965376 | 40965131 | ID=Msa0731000-mRNA-1:three_prime_utr;Parent=Msa0731000-mRNA-1 |
| chr5_1 | three_prime_UTR | 40965398 | 40965739 | 40965398 | ID=Msa0731000-mRNA-1:three_prime_utr;Parent=Msa0731000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
