AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0808840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0808840 MtrunA17_Chr5g0423921 80.000 210 42 0 1 210 1 210 2.21e-103 301
Msa0808840 MtrunA17_Chr5g0423921 88.415 164 18 1 152 314 49 212 3.66e-101 295
Msa0808840 MtrunA17_Chr3g0114751 70.286 175 44 4 5 173 6 178 1.63e-81 246
Msa0808840 MtrunA17_Chr3g0114751 79.167 144 29 1 171 314 75 217 2.16e-78 238
Msa0808840 MtrunA17_Chr2g0277981 61.111 180 67 2 138 314 27 206 2.53e-76 232
Msa0808840 MtrunA17_Chr2g0277981 65.031 163 55 2 13 173 5 167 3.08e-70 217
Msa0808840 MtrunA17_Chr8g0380801 71.724 145 40 1 171 314 67 211 3.07e-72 222
Msa0808840 MtrunA17_Chr8g0380801 63.743 171 57 3 8 173 2 172 4.23e-61 193
Msa0808840 MtrunA17_Chr8g0380821 71.171 111 31 1 205 314 2 112 1.90e-49 160
Msa0808840 MtrunA17_Chr8g0380821 63.291 79 28 1 103 180 2 80 2.09e-24 95.5
Msa0808840 MtrunA17_Chr4g0042721 47.222 144 76 0 171 314 73 216 3.45e-48 160
Msa0808840 MtrunA17_Chr4g0042721 41.615 161 88 2 26 180 24 184 3.33e-41 142
Msa0808840 MtrunA17_Chr6g0453521 41.379 145 84 1 171 314 68 212 5.08e-41 142
Msa0808840 MtrunA17_Chr6g0453521 39.216 153 86 3 28 173 21 173 1.84e-34 125
Msa0808840 MtrunA17_Chr7g0217911 39.583 144 87 0 171 314 5 148 3.79e-39 135
Msa0808840 MtrunA17_Chr7g0217911 40.385 104 62 0 69 172 5 108 3.46e-26 101
Msa0808840 MtrunA17_Chr5g0417891 36.986 146 90 2 171 314 74 219 2.19e-31 117
Msa0808840 MtrunA17_Chr5g0417891 33.140 172 106 5 12 174 10 181 2.20e-25 101
Msa0808840 MtrunA17_Chr5g0417901 37.255 153 95 1 163 314 62 214 1.29e-30 115
Msa0808840 MtrunA17_Chr5g0417901 31.429 175 118 2 1 173 1 175 3.33e-27 105
Msa0808840 MtrunA17_Chr5g0417931 38.060 134 83 0 181 314 90 223 5.92e-25 100
Msa0808840 MtrunA17_Chr5g0417931 32.558 172 106 5 12 173 13 184 5.70e-20 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0808840 AT1G09580.1 61.047 172 63 2 147 314 46 217 4.47e-71 219
Msa0808840 AT1G09580.1 59.172 169 66 2 8 173 10 178 2.92e-68 212
Msa0808840 AT1G21900.1 65.772 149 50 1 167 314 68 216 1.31e-68 213
Msa0808840 AT1G21900.1 56.497 177 68 4 2 173 5 177 7.74e-65 204
Msa0808840 AT1G57620.1 58.721 172 67 2 147 314 41 212 3.15e-67 209
Msa0808840 AT1G57620.1 54.857 175 76 2 9 180 6 180 3.58e-62 196
Msa0808840 AT3G10780.1 56.081 148 61 1 171 314 70 217 2.80e-48 161
Msa0808840 AT3G10780.1 44.162 197 103 2 21 210 19 215 8.75e-48 160
Msa0808840 AT1G26690.1 43.750 144 81 0 171 314 71 214 1.03e-43 149
Msa0808840 AT1G26690.1 39.645 169 91 2 15 172 6 174 4.89e-39 137
Msa0808840 AT1G14010.1 43.750 144 81 0 171 314 69 212 3.11e-43 148
Msa0808840 AT1G14010.1 36.970 165 98 2 14 172 8 172 4.36e-34 124
Msa0808840 AT1G69460.1 43.056 144 82 0 171 314 71 214 3.69e-42 145
Msa0808840 AT1G69460.1 38.462 169 95 3 11 173 10 175 3.63e-35 127
Msa0808840 AT2G03290.1 40.523 153 91 0 162 314 61 213 7.62e-40 139
Msa0808840 AT2G03290.1 35.256 156 94 1 25 173 19 174 4.38e-30 114
Msa0808840 AT3G29070.1 40.559 143 85 0 172 314 83 225 8.13e-37 132
Msa0808840 AT3G29070.1 37.662 154 90 2 25 172 32 185 5.86e-33 121
Msa0808840 AT2G03040.1 35.811 148 88 1 25 165 19 166 3.29e-29 110
Msa0808840 AT2G03040.1 37.736 106 66 0 162 267 61 166 3.65e-22 91.7
Msa0808840 AT3G22845.1 29.496 139 94 2 172 310 73 207 6.11e-11 61.6

Find 90 sgRNAs with CRISPR-Local

Find 784 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGAATGCTTACGGACTTT+TGG 0.251684 5_3:-33991571 Msa0808840:three_prime_UTR
GGAACAGGGTTTGGGTTTCT+TGG 0.278183 5_3:+34000989 None:intergenic
TCGATGTGAGTGCCTCTTCT+TGG 0.284936 5_3:+33991606 None:intergenic
TGTGTAGCAGGAAGTTTCTT+TGG 0.290728 5_3:+33991243 None:intergenic
GAAATTATGTGGCATGCTTT+TGG 0.304500 5_3:-33992810 Msa0808840:CDS
GAAATTATGTGGCATGCTTT+TGG 0.304500 5_3:-33997640 Msa0808840:CDS
TTTATGAGGGAACAGGGTTT+GGG 0.307947 5_3:+34000981 None:intergenic
GTCAGCCTTGATTGGAAAAC+TGG 0.328485 5_3:-33992754 Msa0808840:CDS
GTCAGCCTTGATTGGAAAAC+TGG 0.328485 5_3:-33997584 Msa0808840:CDS
GAAACTTCCTGCTACACATT+TGG 0.333338 5_3:-33991238 Msa0808840:three_prime_UTR
TTGCAGGTAACATCTCCTTT+TGG 0.356646 5_3:-33992898 Msa0808840:intron
TTGCAGGTAACATCTCCTTT+TGG 0.356646 5_3:-33997728 Msa0808840:intron
GAACAGGGTTTGGGTTTCTT+GGG 0.357699 5_3:+34000990 None:intergenic
CGATTATCTAATTTATTTGA+AGG 0.366207 5_3:-33992525 Msa0808840:CDS
CGATTATCTAATTTATTTGA+AGG 0.366207 5_3:-33997354 Msa0808840:CDS
TTTGGGTTTCTTGGGAGGGT+AGG 0.370173 5_3:+34000998 None:intergenic
AAGAGGCACTCACATCGATT+AGG 0.379215 5_3:-33991601 Msa0808840:three_prime_UTR
TACATATTTCACACCCTTCA+CGG 0.388325 5_3:+33991520 None:intergenic
TAGTTTCTGGATTGCAACTT+TGG 0.395311 5_3:-33991775 Msa0808840:CDS
TGGTTGACTCTTCCAAGTTC+AGG 0.395335 5_3:-34000774 Msa0808840:CDS
TGGAATTTCAGCAAAGGATT+GGG 0.395382 5_3:-33992734 Msa0808840:CDS
TGGAATTTCAGCAAAGGATT+GGG 0.395382 5_3:-33997564 Msa0808840:CDS
CAGGGTTTGGGTTTCTTGGG+AGG 0.403415 5_3:+34000993 None:intergenic
CTGGAATTTCAGCAAAGGAT+TGG 0.405549 5_3:-33992735 Msa0808840:CDS
CTGGAATTTCAGCAAAGGAT+TGG 0.405549 5_3:-33997565 Msa0808840:CDS
AGGGTGTTGAACTTGAAATC+AGG 0.420862 5_3:-33992577 Msa0808840:CDS
AGGGTGTTGAACTTGAAATC+AGG 0.420862 5_3:-33997406 Msa0808840:CDS
GTGTAGCAGGAAGTTTCTTT+GGG 0.421942 5_3:+33991244 None:intergenic
ATTTGGAATGCTTTGATAGC+AGG 0.427948 5_3:-33991221 Msa0808840:three_prime_UTR
CTGACACTTACACTACCTTC+AGG 0.429753 5_3:+33992772 None:intergenic
CTGACACTTACACTACCTTC+AGG 0.429753 5_3:+33997602 None:intergenic
AGAGGCACTCACATCGATTA+GGG 0.435906 5_3:-33991600 Msa0808840:three_prime_UTR
ACACATTTAGTTCCTGAACT+TGG 0.448372 5_3:+34000762 None:intergenic
AGTGAGAGCACCAAAATGAT+AGG 0.455920 5_3:+33991303 None:intergenic
TGATGAACGTTGTTTCCAAA+AGG 0.464734 5_3:+33992883 None:intergenic
TGATGAACGTTGTTTCCAAA+AGG 0.464734 5_3:+33997713 None:intergenic
CAGGAAGCTCGAAGGAATAG+TGG 0.469265 5_3:-33992558 Msa0808840:CDS
TTGATAAATTAAGTTTGTGT+TGG 0.470583 5_3:+34001021 None:intergenic
GTGTAAGTGTCAGCCTTGAT+TGG 0.480040 5_3:-33992762 Msa0808840:CDS
GTGTAAGTGTCAGCCTTGAT+TGG 0.480040 5_3:-33997592 Msa0808840:CDS
TATAGAGCAGCTATGACAAC+TGG 0.487758 5_3:-33991412 Msa0808840:three_prime_UTR
AAGCATTCCAAATGTGTAGC+AGG 0.488770 5_3:+33991231 None:intergenic
TTTAGAAGTTTAAGGAGTAT+GGG 0.488985 5_3:+33991194 None:intergenic
GAGAATCTAGTTGAGGCAAA+AGG 0.493384 5_3:-33991660 Msa0808840:three_prime_UTR
AAGTCCGTAAGCATTCTGTT+AGG 0.502865 5_3:+33991575 None:intergenic
TGGTTTAGTATCATGTCCCT+TGG 0.503070 5_3:-33991809 Msa0808840:CDS
TACTATGTTGTAACTGATGA+AGG 0.503160 5_3:-34000699 Msa0808840:CDS
GATTAGGGAACATACCTTTG+TGG 0.508795 5_3:+34000662 None:intergenic
AAACAAATGCTCGAGTCGCT+TGG 0.510777 5_3:-33991829 Msa0808840:CDS
TGCCACATAATTTCCACTCT+CGG 0.522318 5_3:+33992819 None:intergenic
TGCCACATAATTTCCACTCT+CGG 0.522318 5_3:+33997649 None:intergenic
ACATATGGCTTGAGCCGTGA+AGG 0.527506 5_3:-33991534 Msa0808840:three_prime_UTR
AGTTGAGGCAAAAGGAAACT+TGG 0.530434 5_3:-33991652 Msa0808840:three_prime_UTR
GGCGCCTAACAGAATGCTTA+CGG 0.534420 5_3:-33991579 Msa0808840:three_prime_UTR
AGGGTTTGGGTTTCTTGGGA+GGG 0.542134 5_3:+34000994 None:intergenic
AAACTAAAACGCAGAGACCA+AGG 0.543213 5_3:+33991792 None:intergenic
GAAAACTGGAATTTCAGCAA+AGG 0.546642 5_3:-33992740 Msa0808840:CDS
GAAAACTGGAATTTCAGCAA+AGG 0.546642 5_3:-33997570 Msa0808840:CDS
GCATTTACAACTACCGAGAG+TGG 0.562957 5_3:-33992832 Msa0808840:CDS
GCATTTACAACTACCGAGAG+TGG 0.562957 5_3:-33997662 Msa0808840:CDS
TGACACTTACACTACCTTCA+GGG 0.571234 5_3:+33992773 None:intergenic
TGACACTTACACTACCTTCA+GGG 0.571234 5_3:+33997603 None:intergenic
TTTGGAATGCTTTGATAGCA+GGG 0.574268 5_3:-33991220 Msa0808840:three_prime_UTR
TCAAATAAATTAGATAATCG+TGG 0.574741 5_3:+33992528 None:intergenic
TCAAATAAATTAGATAATCG+TGG 0.574741 5_3:+33997357 None:intergenic
ATAAATTAGATAATCGTGGA+TGG 0.583572 5_3:+33992532 None:intergenic
ATAAATTAGATAATCGTGGA+TGG 0.583572 5_3:+33997361 None:intergenic
AAAATCTTGTAGTATTCAAG+TGG 0.585303 5_3:+33991364 None:intergenic
TACCGAGAGTGGAAATTATG+TGG 0.589093 5_3:-33992821 Msa0808840:CDS
TACCGAGAGTGGAAATTATG+TGG 0.589093 5_3:-33997651 Msa0808840:CDS
AACTAAAACGCAGAGACCAA+GGG 0.592971 5_3:+33991793 None:intergenic
AGGAACTAAATGTGTGTCTG+AGG 0.602454 5_3:-34000754 Msa0808840:CDS
CATATGGCTTGAGCCGTGAA+GGG 0.607995 5_3:-33991533 Msa0808840:three_prime_UTR
CAAGCAATGAAGTTAAGCGA+TGG 0.616267 5_3:-34000867 Msa0808840:exon
ACAAACAAGAAACCAAGAAG+AGG 0.620782 5_3:-33991618 Msa0808840:three_prime_UTR
CTTGAAATCAGGAAGCTCGA+AGG 0.630601 5_3:-33992566 Msa0808840:CDS
CTTGAAATCAGGAAGCTCGA+AGG 0.630601 5_3:-33997395 Msa0808840:CDS
TTGGAATGCTTTGATAGCAG+GGG 0.633139 5_3:-33991219 Msa0808840:three_prime_UTR
CATAATGAAAATGTTACACA+AGG 0.634420 5_3:-33992862 Msa0808840:CDS
CATAATGAAAATGTTACACA+AGG 0.634420 5_3:-33997692 Msa0808840:CDS
TGCAAAGAAAGAAAAGATTG+AGG 0.640940 5_3:-33992704 Msa0808840:intron
TGCAAAGAAAGAAAAGATTG+AGG 0.640940 5_3:-33997534 Msa0808840:intron
GCTACAGGGAAGCAACAATG+AGG 0.645196 5_3:-33996682 Msa0808840:intron
GCTACAGGGAAGCAACGATG+AGG 0.655281 5_3:-33991865 Msa0808840:intron
CTACAGGGAAGCAACGATGA+GGG 0.656889 5_3:-33991864 Msa0808840:intron
CTACAGGGAAGCAACAATGA+GGG 0.659995 5_3:-33996681 Msa0808840:intron
TCTTCACACTATTTCCACAA+AGG 0.664764 5_3:-34000676 Msa0808840:intron
ATGGAAGGAAAACACCCTGA+AGG 0.665157 5_3:-33992787 Msa0808840:CDS
ATGGAAGGAAAACACCCTGA+AGG 0.665157 5_3:-33997617 Msa0808840:CDS
TGAGGATATTCAAACACATG+TGG 0.731163 5_3:-34000736 Msa0808840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr5_3:33996448-33996467 Msa0808840:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr5_3:33996447-33996466 Msa0808840:intron 0.0%
!! TATATATATATATATATATA+GGG + chr5_3:33996448-33996467 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr5_3:33996447-33996466 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr5_3:33996447-33996466 Msa0808840:intron 0.0%
!! TATATATATATATATATATA+GGG - chr5_3:33996448-33996467 Msa0808840:intron 0.0%
!!! TGATATTTTTCAATTTTTAA+TGG - chr5_3:33993373-33993392 Msa0808840:intron 10.0%
!! ATATTAATATTCATCAAATT+CGG - chr5_3:33994252-33994271 Msa0808840:intron 10.0%
!!! TTTAAAATCACATATATAAT+TGG - chr5_3:33994292-33994311 Msa0808840:intron 10.0%
!!! CAATTAAATTGATAATTTAA+TGG - chr5_3:33994366-33994385 Msa0808840:intron 10.0%
!!! TATTTAATTTATATTTTTGC+AGG - chr5_3:33994411-33994430 Msa0808840:intron 10.0%
!!! TGATATTTTTCAATTTTTAA+TGG - chr5_3:33993373-33993392 Msa0808840:intron 10.0%
!! ATATTAATATTCATCAAATT+CGG - chr5_3:33994252-33994271 Msa0808840:intron 10.0%
!!! TTTAAAATCACATATATAAT+TGG - chr5_3:33994292-33994311 Msa0808840:intron 10.0%
!!! CAATTAAATTGATAATTTAA+TGG - chr5_3:33994366-33994385 Msa0808840:intron 10.0%
!!! TATTTAATTTATATTTTTGC+AGG - chr5_3:33994411-33994430 Msa0808840:intron 10.0%
!! AACATAAATTGTTATGTTAA+TGG - chr5_3:33993317-33993336 Msa0808840:intron 15.0%
!!! TTTTGTTTGTTGAAATTATA+TGG - chr5_3:33993455-33993474 Msa0808840:intron 15.0%
!!! TTTGTTTGTTGAAATTATAT+GGG - chr5_3:33993456-33993475 Msa0808840:intron 15.0%
!!! ACATAAAACATTTAAAATTG+TGG + chr5_3:33993546-33993565 None:intergenic 15.0%
!!! TAAATGTTTTATGTTAATCT+TGG - chr5_3:33993552-33993571 Msa0808840:intron 15.0%
!! ATGTACATTCTATAATTTAA+AGG - chr5_3:33993655-33993674 Msa0808840:intron 15.0%
!!! TAGTTTTATACATATAATCT+TGG + chr5_3:33995139-33995158 None:intergenic 15.0%
!!! GATCTTTTTTACAATTAATA+TGG - chr5_3:33997646-33997665 Msa0808840:CDS 15.0%
!! AACATAAATTGTTATGTTAA+TGG - chr5_3:33993317-33993336 Msa0808840:intron 15.0%
!!! TTTTGTTTGTTGAAATTATA+TGG - chr5_3:33993455-33993474 Msa0808840:intron 15.0%
!!! TTTGTTTGTTGAAATTATAT+GGG - chr5_3:33993456-33993475 Msa0808840:intron 15.0%
!!! ACATAAAACATTTAAAATTG+TGG + chr5_3:33993546-33993565 None:intergenic 15.0%
!!! TAAATGTTTTATGTTAATCT+TGG - chr5_3:33993552-33993571 Msa0808840:intron 15.0%
!! ATGTACATTCTATAATTTAA+AGG - chr5_3:33993655-33993674 Msa0808840:intron 15.0%
!! ATATAAGCAAAACATTAATA+TGG + chr5_3:33994709-33994728 None:intergenic 15.0%
!!! AAAAATGTATTAGAGAATTT+TGG + chr5_3:33999767-33999786 None:intergenic 15.0%
!!! ATTTAAAATATTTTGAGTCT+AGG + chr5_3:34000994-34001013 None:intergenic 15.0%
!!! GACTCAAAATATTTTAAATT+TGG - chr5_3:34000995-34001014 Msa0808840:five_prime_UTR 15.0%
!! TTGATAAATTAAGTTTGTGT+TGG + chr5_3:33991137-33991156 None:intergenic 20.0%
!!! TTAAGGTAATGTTTTTATGA+GGG + chr5_3:33991190-33991209 None:intergenic 20.0%
!!! ATTAAGGTAATGTTTTTATG+AGG + chr5_3:33991191-33991210 None:intergenic 20.0%
!!! TAAATATTTACTCTTTTGTC+CGG + chr5_3:33991670-33991689 None:intergenic 20.0%
!! AACATTATACACTAAGAAAA+GGG + chr5_3:33991858-33991877 None:intergenic 20.0%
!! TCACAATACAATCTAAATAT+GGG - chr5_3:33992106-33992125 Msa0808840:intron 20.0%
!! ATTGTTATGTTAATGGAATT+TGG - chr5_3:33993324-33993343 Msa0808840:intron 20.0%
!!! TGGTTTTATAAGGAATTATT+TGG + chr5_3:33993910-33993929 None:intergenic 20.0%
!! AAATCACATATATAATTGGT+TGG - chr5_3:33994296-33994315 Msa0808840:intron 20.0%
!! TCAAATAAATTAGATAATCG+TGG + chr5_3:33994801-33994820 None:intergenic 20.0%
!! CGATTATCTAATTTATTTGA+AGG - chr5_3:33994801-33994820 Msa0808840:intron 20.0%
!! AAAATCTTATAGTATTCAAG+TGG + chr5_3:33995954-33995973 None:intergenic 20.0%
!!! CTCTGAAAATATTTTCAATT+TGG - chr5_3:33996196-33996215 Msa0808840:intron 20.0%
!!! ATAATGACAAAAAGGTTTTT+TGG + chr5_3:33996823-33996842 None:intergenic 20.0%
!! TGATTTGAATAATGACAAAA+AGG + chr5_3:33996831-33996850 None:intergenic 20.0%
!! TTATTCAAATCAACTTCAAA+TGG - chr5_3:33996839-33996858 Msa0808840:intron 20.0%
!! TCACAATACAATCTAAATAT+GGG - chr5_3:33992106-33992125 Msa0808840:intron 20.0%
!! ATTGTTATGTTAATGGAATT+TGG - chr5_3:33993324-33993343 Msa0808840:intron 20.0%
!!! TGGTTTTATAAGGAATTATT+TGG + chr5_3:33993910-33993929 None:intergenic 20.0%
!! AAATCACATATATAATTGGT+TGG - chr5_3:33994296-33994315 Msa0808840:intron 20.0%
!! TCAAATAAATTAGATAATCG+TGG + chr5_3:33994801-33994820 None:intergenic 20.0%
!! CGATTATCTAATTTATTTGA+AGG - chr5_3:33994801-33994820 Msa0808840:intron 20.0%
!!! TTTTAAAGTTTGATTAGATC+AGG - chr5_3:33999676-33999695 Msa0808840:intron 20.0%
!!! TTTAAAGTTTGATTAGATCA+GGG - chr5_3:33999677-33999696 Msa0808840:intron 20.0%
!! GAGAATTTAATTAATACATG+CGG + chr5_3:33999991-34000010 None:intergenic 20.0%
!! GGAATATAAGAAAAAACATA+TGG - chr5_3:34000606-34000625 Msa0808840:intron 20.0%
!! TTCTAAAAACAGAAGCTATA+TGG - chr5_3:33991361-33991380 Msa0808840:three_prime_UTR 25.0%
! TCTAAACTAAGCAATGATTA+GGG + chr5_3:33991511-33991530 None:intergenic 25.0%
! ATCTAAACTAAGCAATGATT+AGG + chr5_3:33991512-33991531 None:intergenic 25.0%
!! AAATATTTACTCTTTTGTCC+GGG + chr5_3:33991669-33991688 None:intergenic 25.0%
! ACTAGTGTGATCTATATAAA+AGG - chr5_3:33991711-33991730 Msa0808840:three_prime_UTR 25.0%
! CTAGTGTGATCTATATAAAA+GGG - chr5_3:33991712-33991731 Msa0808840:three_prime_UTR 25.0%
! CAACATTATACACTAAGAAA+AGG + chr5_3:33991859-33991878 None:intergenic 25.0%
! GTGTATAATGTTGTTAAAAC+AGG - chr5_3:33991866-33991885 Msa0808840:intron 25.0%
! AATCAAAAGTTTACCAACAA+TGG - chr5_3:33991916-33991935 Msa0808840:intron 25.0%
! AAATTTGAACTCGTTACTTA+GGG + chr5_3:33992016-33992035 None:intergenic 25.0%
! AAAATTTGAACTCGTTACTT+AGG + chr5_3:33992017-33992036 None:intergenic 25.0%
! GTCACAATACAATCTAAATA+TGG - chr5_3:33992105-33992124 Msa0808840:intron 25.0%
! AAATATGGGTGAATTGAAAT+TGG - chr5_3:33992120-33992139 Msa0808840:intron 25.0%
! ATAGAGAAAATTTGACTAGA+TGG - chr5_3:33993148-33993167 Msa0808840:intron 25.0%
! TAGAGAAAATTTGACTAGAT+GGG - chr5_3:33993149-33993168 Msa0808840:intron 25.0%
! TAAACTTAGTACCTATAACA+TGG - chr5_3:33993236-33993255 Msa0808840:intron 25.0%
!!! GTTTTTTGTTACCATGTTAT+AGG + chr5_3:33993250-33993269 None:intergenic 25.0%
! TTTCAAACATTCATTGAAGT+TGG - chr5_3:33993282-33993301 Msa0808840:intron 25.0%
! TTTGTTGAAATTATATGGGT+TGG - chr5_3:33993460-33993479 Msa0808840:intron 25.0%
!! TAAAATTGTGGTTCTACATT+CGG + chr5_3:33993534-33993553 None:intergenic 25.0%
!! TTTCTATTTTGTGAGTTTGA+CGG - chr5_3:33993684-33993703 Msa0808840:intron 25.0%
!!! TTTTGGTTCAGAAAAATCTA+TGG + chr5_3:33993725-33993744 None:intergenic 25.0%
!! GATAGAGAAAATAAGCATTT+TGG + chr5_3:33993742-33993761 None:intergenic 25.0%
!!! AATGCTTATTTTCTCTATCT+AGG - chr5_3:33993743-33993762 Msa0808840:intron 25.0%
!!! ATGCTTATTTTCTCTATCTA+GGG - chr5_3:33993744-33993763 Msa0808840:intron 25.0%
! TTGGAATTCATAAGCTTATT+AGG - chr5_3:33993793-33993812 Msa0808840:intron 25.0%
! TGGAATTCATAAGCTTATTA+GGG - chr5_3:33993794-33993813 Msa0808840:intron 25.0%
!!! CTATTTGGATTGGTTTTATA+AGG + chr5_3:33993920-33993939 None:intergenic 25.0%
!! CTTCTTATAACATTTGAGTT+TGG - chr5_3:33994009-33994028 Msa0808840:intron 25.0%
! CTTAAATTATACTTGATGTC+TGG + chr5_3:33994195-33994214 None:intergenic 25.0%
!!! TGTAAAAAGTATTACATGGT+CGG + chr5_3:33994332-33994351 None:intergenic 25.0%
!!! TCAGTGTAAAAAGTATTACA+TGG + chr5_3:33994336-33994355 None:intergenic 25.0%
! CATAATGAAAATGTTACACA+AGG - chr5_3:33994463-33994482 Msa0808840:intron 25.0%
!!! CTTATATGATTTGTTTGCTT+TGG - chr5_3:33994722-33994741 Msa0808840:intron 25.0%
! ATAAATTAGATAATCGTGGA+TGG + chr5_3:33994797-33994816 None:intergenic 25.0%
! ATTTCAGTTTGATTAGATCA+GGG - chr5_3:33994859-33994878 Msa0808840:intron 25.0%
! GGTGTATCATTAATTTCATA+CGG - chr5_3:33994880-33994899 Msa0808840:intron 25.0%
!! TAAATGTTAGAGGAGAATTT+TGG + chr5_3:33994948-33994967 None:intergenic 25.0%
! AATACAAAATTCCCCTAATT+TGG + chr5_3:33994977-33994996 None:intergenic 25.0%
! CAAACTGAAATCAAACTTAA+GGG + chr5_3:33995060-33995079 None:intergenic 25.0%
! TATTTCACTAAATCGATAGT+TGG - chr5_3:33995274-33995293 Msa0808840:intron 25.0%
!!! AATCATTTTTTGTTTCCTAG+AGG + chr5_3:33995378-33995397 None:intergenic 25.0%
! AACTAGATTCTCAAAAACTT+GGG + chr5_3:33995670-33995689 None:intergenic 25.0%
!! TTACTAACTTTTGGCAATAT+AGG - chr5_3:33995776-33995795 Msa0808840:intron 25.0%
! GGCAATATAGGAAAAAAATA+TGG - chr5_3:33995788-33995807 Msa0808840:intron 25.0%
! GGAAAAAAATATGGTTTGAA+TGG - chr5_3:33995797-33995816 Msa0808840:intron 25.0%
! AAAAAGAGTGAAATTCAAGA+GGG + chr5_3:33995847-33995866 None:intergenic 25.0%
!! CTTTTCTATTCCTATCATTT+TGG - chr5_3:33996003-33996022 Msa0808840:intron 25.0%
!! TGAAAATATTTTCAGAGTCT+AGG + chr5_3:33996193-33996212 None:intergenic 25.0%
! TTCTATGTGCATATATCATT+GGG - chr5_3:33996269-33996288 Msa0808840:intron 25.0%
! TTCAATAACATTACACCAAT+TGG + chr5_3:33996302-33996321 None:intergenic 25.0%
!!! ATAGAAGACACTTTTTATGA+AGG + chr5_3:33996634-33996653 None:intergenic 25.0%
!!! ATGGAACGAATACATTTTTT+TGG - chr5_3:33996995-33997014 Msa0808840:intron 25.0%
!!! TGGAACGAATACATTTTTTT+GGG - chr5_3:33996996-33997015 Msa0808840:intron 25.0%
!! AAATGCTCACTAATATTTTG+AGG + chr5_3:33997585-33997604 None:intergenic 25.0%
! TTTCAATTTACTCATTCTCT+CGG - chr5_3:33997606-33997625 Msa0808840:CDS 25.0%
! AAATTTGAACTCGTTACTTA+GGG + chr5_3:33992016-33992035 None:intergenic 25.0%
! AAAATTTGAACTCGTTACTT+AGG + chr5_3:33992017-33992036 None:intergenic 25.0%
! GTCACAATACAATCTAAATA+TGG - chr5_3:33992105-33992124 Msa0808840:intron 25.0%
! AAATATGGGTGAATTGAAAT+TGG - chr5_3:33992120-33992139 Msa0808840:intron 25.0%
! ATAGAGAAAATTTGACTAGA+TGG - chr5_3:33993148-33993167 Msa0808840:intron 25.0%
! TAGAGAAAATTTGACTAGAT+GGG - chr5_3:33993149-33993168 Msa0808840:intron 25.0%
! TAAACTTAGTACCTATAACA+TGG - chr5_3:33993236-33993255 Msa0808840:intron 25.0%
!!! GTTTTTTGTTACCATGTTAT+AGG + chr5_3:33993250-33993269 None:intergenic 25.0%
! TTTCAAACATTCATTGAAGT+TGG - chr5_3:33993282-33993301 Msa0808840:intron 25.0%
! TTTGTTGAAATTATATGGGT+TGG - chr5_3:33993460-33993479 Msa0808840:intron 25.0%
!! TAAAATTGTGGTTCTACATT+CGG + chr5_3:33993534-33993553 None:intergenic 25.0%
!! TTTCTATTTTGTGAGTTTGA+CGG - chr5_3:33993684-33993703 Msa0808840:intron 25.0%
! TTTGTGTTCAGAAAAATCTA+TGG + chr5_3:33998555-33998574 None:intergenic 25.0%
!!! AATGCTTATTTTCTCTATCT+AGG - chr5_3:33993743-33993762 Msa0808840:intron 25.0%
!!! ATGCTTATTTTCTCTATCTA+GGG - chr5_3:33993744-33993763 Msa0808840:intron 25.0%
! TTGGAATTCATAAGCTTATT+AGG - chr5_3:33993793-33993812 Msa0808840:intron 25.0%
! TGGAATTCATAAGCTTATTA+GGG - chr5_3:33993794-33993813 Msa0808840:intron 25.0%
!!! CTATTTGGATTGGTTTTATA+AGG + chr5_3:33993920-33993939 None:intergenic 25.0%
!! CTTCTTATAACATTTGAGTT+TGG - chr5_3:33994009-33994028 Msa0808840:intron 25.0%
! CTTAAATTATACTTGATGTC+TGG + chr5_3:33994195-33994214 None:intergenic 25.0%
!!! TGTAAAAAGTATTACATGGT+CGG + chr5_3:33994332-33994351 None:intergenic 25.0%
!!! TCAGTGTAAAAAGTATTACA+TGG + chr5_3:33994336-33994355 None:intergenic 25.0%
! CATAATGAAAATGTTACACA+AGG - chr5_3:33994463-33994482 Msa0808840:intron 25.0%
!! TTCTTTTTGTGATGTATGAA+TGG - chr5_3:33994675-33994694 Msa0808840:intron 25.0%
!!! CTTATATGATTTGTTTGCTT+TGG - chr5_3:33994722-33994741 Msa0808840:intron 25.0%
! ATAAATTAGATAATCGTGGA+TGG + chr5_3:33994797-33994816 None:intergenic 25.0%
! GGTGTATCATTAATTTCATA+CGG - chr5_3:33994880-33994899 Msa0808840:intron 25.0%
!!! TTTTCAAGTTCTCCTAAATT+AGG - chr5_3:33999783-33999802 Msa0808840:intron 25.0%
!!! TTTCAAGTTCTCCTAAATTA+GGG - chr5_3:33999784-33999803 Msa0808840:intron 25.0%
! ATACAAAATTCCCCTAATTT+AGG + chr5_3:33994976-33994995 None:intergenic 25.0%
! TATGTTTGGAAATTTAAGAG+GGG + chr5_3:33999859-33999878 None:intergenic 25.0%
! GTATGTTTGGAAATTTAAGA+GGG + chr5_3:33999860-33999879 None:intergenic 25.0%
! CAAACTGAAATCAAACTTAA+GGG + chr5_3:33995060-33995079 None:intergenic 25.0%
!!! AATCATTTTTTGTTTCCTAG+AGG + chr5_3:33995378-33995397 None:intergenic 25.0%
!! TTTTGAATATTCCCTCTTTT+TGG - chr5_3:34000686-34000705 Msa0808840:CDS 25.0%
! AAAATCTTGTAGTATTCAAG+TGG + chr5_3:34000794-34000813 None:intergenic 25.0%
!! CTTTTCTATTCCTATCATTT+TGG - chr5_3:33996003-33996022 Msa0808840:intron 25.0%
!! TTTAGAAGTTTAAGGAGTAT+GGG + chr5_3:34000964-34000983 None:intergenic 25.0%
!!! TTTTAGAAGTTTAAGGAGTA+TGG + chr5_3:34000965-34000984 None:intergenic 25.0%
! TCATCCAAAAACAAAATCAA+GGG + chr5_3:34001025-34001044 None:intergenic 25.0%
! TTCATCCAAAAACAAAATCA+AGG + chr5_3:34001026-34001045 None:intergenic 25.0%
!! AATGTTTTTATGAGGGAACA+GGG + chr5_3:33991183-33991202 None:intergenic 30.0%
!! TAATGTTTTTATGAGGGAAC+AGG + chr5_3:33991184-33991203 None:intergenic 30.0%
!! TTGTCTCTTGCTTTTGATTA+AGG + chr5_3:33991207-33991226 None:intergenic 30.0%
TACTATGTTGTAACTGATGA+AGG - chr5_3:33991456-33991475 Msa0808840:intron 30.0%
TCAAGTCAATTATTGTGATG+AGG - chr5_3:33991584-33991603 Msa0808840:three_prime_UTR 30.0%
CAAGTCAATTATTGTGATGA+GGG - chr5_3:33991585-33991604 Msa0808840:three_prime_UTR 30.0%
AATTATTGTGATGAGGGTTT+GGG - chr5_3:33991591-33991610 Msa0808840:three_prime_UTR 30.0%
! AGTTTAACTGGTTTAAGCTA+AGG - chr5_3:33991615-33991634 Msa0808840:three_prime_UTR 30.0%
! GTTTAACTGGTTTAAGCTAA+GGG - chr5_3:33991616-33991635 Msa0808840:three_prime_UTR 30.0%
AAATAAGGCCAAAAACAAAC+AGG + chr5_3:33991788-33991807 None:intergenic 30.0%
AAAAGATCTAGACCAAGTTA+GGG - chr5_3:33991831-33991850 Msa0808840:CDS 30.0%
GGATGTTATTAGTTAAGTGT+TGG - chr5_3:33991887-33991906 Msa0808840:intron 30.0%
GGTGCAAACAAAAAAAAATG+AGG - chr5_3:33992164-33992183 Msa0808840:intron 30.0%
GCAAACAAAAAAAAATGAGG+AGG - chr5_3:33992167-33992186 Msa0808840:intron 30.0%
AAAAAAAAATGAGGAGGTTC+AGG - chr5_3:33992173-33992192 Msa0808840:intron 30.0%
AAAAAAAATGAGGAGGTTCA+GGG - chr5_3:33992174-33992193 Msa0808840:intron 30.0%
GAAGGCTTATAAGAATTGTT+AGG - chr5_3:33992398-33992417 Msa0808840:intron 30.0%
AAGATGCATCTTGTTGATAT+GGG + chr5_3:33992429-33992448 None:intergenic 30.0%
! AACAAGATGCATCTTCTTTT+CGG - chr5_3:33992434-33992453 Msa0808840:intron 30.0%
GAAGGCTTATAAGAATTGTT+AGG - chr5_3:33992398-33992417 Msa0808840:intron 30.0%
AAGATGCATCTTGTTGATAT+GGG + chr5_3:33992429-33992448 None:intergenic 30.0%
! AACAAGATGCATCTTCTTTT+CGG - chr5_3:33992434-33992453 Msa0808840:intron 30.0%
TTCTCTATATGCAAGAGTTA+GGG + chr5_3:33993136-33993155 None:intergenic 30.0%
TTTCTCTATATGCAAGAGTT+AGG + chr5_3:33993137-33993156 None:intergenic 30.0%
AGAGAAAATTTGACTAGATG+GGG - chr5_3:33993150-33993169 Msa0808840:intron 30.0%
TAGTGATGACTAATCTTCAT+TGG + chr5_3:33993206-33993225 None:intergenic 30.0%
!!! TTACTGGTTTTCAGTTTTCA+TGG - chr5_3:33993600-33993619 Msa0808840:intron 30.0%
TTCAGAAAAATCTATGGATC+TGG + chr5_3:33993719-33993738 None:intergenic 30.0%
!! TGCTTATTTTCTCTATCTAG+GGG - chr5_3:33993745-33993764 Msa0808840:intron 30.0%
GGAATTCATAAGCTTATTAG+GGG - chr5_3:33993795-33993814 Msa0808840:intron 30.0%
! TACAATATTTTCTCCCAAAC+AGG - chr5_3:33993856-33993875 Msa0808840:intron 30.0%
! CATTTTCTTTAGCGTTTTTG+CGG - chr5_3:33994117-33994136 Msa0808840:intron 30.0%
! ATTTTCTTTAGCGTTTTTGC+GGG - chr5_3:33994118-33994137 Msa0808840:intron 30.0%
! AAATTCCAGTTTTCCAATCA+AGG + chr5_3:33994579-33994598 None:intergenic 30.0%
TGCAAAGAAAGAAAAGATTG+AGG - chr5_3:33994621-33994640 Msa0808840:intron 30.0%
! ATTTGTTTGCTTTGGTTCAA+GGG - chr5_3:33994730-33994749 Msa0808840:intron 30.0%
GATTTCAGTTTGATTAGATC+AGG - chr5_3:33994858-33994877 Msa0808840:intron 30.0%
!! ACATTTAGTTCTGCCAAATT+AGG - chr5_3:33994961-33994980 Msa0808840:intron 30.0%
!! CATTTAGTTCTGCCAAATTA+GGG - chr5_3:33994962-33994981 Msa0808840:intron 30.0%
!! ATTTAGTTCTGCCAAATTAG+GGG - chr5_3:33994963-33994982 Msa0808840:intron 30.0%
! TCAAACTTAAGGGTATGTTT+GGG + chr5_3:33995050-33995069 None:intergenic 30.0%
! ATCAAACTTAAGGGTATGTT+TGG + chr5_3:33995051-33995070 None:intergenic 30.0%
CCAAACTGAAATCAAACTTA+AGG + chr5_3:33995061-33995080 None:intergenic 30.0%
! CCTTAAGTTTGATTTCAGTT+TGG - chr5_3:33995058-33995077 Msa0808840:intron 30.0%
ACTTGACCATTACAGAAATT+CGG + chr5_3:33995237-33995256 None:intergenic 30.0%
CAACTAGATTCTCAAAAACT+TGG + chr5_3:33995671-33995690 None:intergenic 30.0%
!! AGTTTTTGAGAATCTAGTTG+AGG - chr5_3:33995671-33995690 Msa0808840:intron 30.0%
AAGTTAGTAAGCATTCTGTT+AGG + chr5_3:33995766-33995785 None:intergenic 30.0%
! ACAGAATGCTTACTAACTTT+TGG - chr5_3:33995767-33995786 Msa0808840:intron 30.0%
AAAAGAGTGAAATTCAAGAG+GGG + chr5_3:33995846-33995865 None:intergenic 30.0%
CAAAAAGAGTGAAATTCAAG+AGG + chr5_3:33995848-33995867 None:intergenic 30.0%
! CTCTTGAATTTCACTCTTTT+TGG - chr5_3:33995846-33995865 Msa0808840:intron 30.0%
AATGAGAGAACCAAAATGAT+AGG + chr5_3:33996016-33996035 None:intergenic 30.0%
AATTTGAACATCATTGATGC+AGG + chr5_3:33996061-33996080 None:intergenic 30.0%
! TTTAGAAGTTTAGGGAGTAT+GGG + chr5_3:33996163-33996182 None:intergenic 30.0%
!! TTTTAGAAGTTTAGGGAGTA+TGG + chr5_3:33996164-33996183 None:intergenic 30.0%
!! GTGCAACTTTTAGAAGTTTA+GGG + chr5_3:33996171-33996190 None:intergenic 30.0%
TCATCCAAAAACAAAATCCA+GGG + chr5_3:33996226-33996245 None:intergenic 30.0%
GAACCATAAACCATTCATTT+GGG + chr5_3:33996252-33996271 None:intergenic 30.0%
AGAACCATAAACCATTCATT+TGG + chr5_3:33996253-33996272 None:intergenic 30.0%
GTTCTATGTGCATATATCAT+TGG - chr5_3:33996268-33996287 Msa0808840:intron 30.0%
TGATAAAAGACACCTTCAAA+GGG + chr5_3:33996494-33996513 None:intergenic 30.0%
TTGATAAAAGACACCTTCAA+AGG + chr5_3:33996495-33996514 None:intergenic 30.0%
ACACCTTCATAAAAAGTAGT+TGG - chr5_3:33996566-33996585 Msa0808840:intron 30.0%
!!! ACACCAACTACTTTTTATGA+AGG + chr5_3:33996572-33996591 None:intergenic 30.0%
!! ACTTGCACCTTATTGTTTTT+AGG + chr5_3:33996773-33996792 None:intergenic 30.0%
!!! TTTTTTGGTCAAATCCAAGT+GGG + chr5_3:33996808-33996827 None:intergenic 30.0%
TCAAATCAACTTCAAATGGA+AGG - chr5_3:33996843-33996862 Msa0808840:intron 30.0%
!!! AACGAATACATTTTTTTGGG+TGG - chr5_3:33996999-33997018 Msa0808840:intron 30.0%
TGCGACAAATAAGTATAGTA+TGG - chr5_3:33997077-33997096 Msa0808840:intron 30.0%
TTCACAATGGAGAAAGATAT+GGG + chr5_3:33997505-33997524 None:intergenic 30.0%
! TTTCTCCATTGTGAAGTTTT+TGG - chr5_3:33997510-33997529 Msa0808840:intron 30.0%
AAGAACCAAAAACTTCACAA+TGG + chr5_3:33997518-33997537 None:intergenic 30.0%
!!! GTGAAGTTTTTGGTTCTTTA+TGG - chr5_3:33997520-33997539 Msa0808840:intron 30.0%
!!! GAACTTTTAACTTTACTCGA+AGG - chr5_3:33997707-33997726 Msa0808840:CDS 30.0%
GGTGCAAACAAAAAAAAATG+AGG - chr5_3:33992164-33992183 Msa0808840:intron 30.0%
GCAAACAAAAAAAAATGAGG+AGG - chr5_3:33992167-33992186 Msa0808840:intron 30.0%
AAAAAAAAATGAGGAGGTTC+AGG - chr5_3:33992173-33992192 Msa0808840:intron 30.0%
AAAAAAAATGAGGAGGTTCA+GGG - chr5_3:33992174-33992193 Msa0808840:intron 30.0%
TTCTCTATATGCAAGAGTTA+GGG + chr5_3:33993136-33993155 None:intergenic 30.0%
TTTCTCTATATGCAAGAGTT+AGG + chr5_3:33993137-33993156 None:intergenic 30.0%
AGAGAAAATTTGACTAGATG+GGG - chr5_3:33993150-33993169 Msa0808840:intron 30.0%
TAGTGATGACTAATCTTCAT+TGG + chr5_3:33993206-33993225 None:intergenic 30.0%
TTCTACATTCGGAAAATAGA+CGG + chr5_3:33998353-33998372 None:intergenic 30.0%
!!! TTACTGGTTTTCAGTTTTCA+TGG - chr5_3:33993600-33993619 Msa0808840:intron 30.0%
TTCAGAAAAATCTATGGATC+TGG + chr5_3:33993719-33993738 None:intergenic 30.0%
!! TGCTTATTTTCTCTATCTAG+GGG - chr5_3:33993745-33993764 Msa0808840:intron 30.0%
GGAATTCATAAGCTTATTAG+GGG - chr5_3:33993795-33993814 Msa0808840:intron 30.0%
! TACAATATTTTCTCCCAAAC+AGG - chr5_3:33993856-33993875 Msa0808840:intron 30.0%
! AAATTCCAGTTTTCCAATCA+AGG + chr5_3:33994579-33994598 None:intergenic 30.0%
TGCAAAGAAAGAAAAGATTG+AGG - chr5_3:33994621-33994640 Msa0808840:intron 30.0%
! ATTTGTTTGCTTTGGTTCAA+GGG - chr5_3:33994730-33994749 Msa0808840:intron 30.0%
! TTCAAGTTCTCCTAAATTAG+GGG - chr5_3:33999785-33999804 Msa0808840:intron 30.0%
GGTATGTTTGGAAATTTAAG+AGG + chr5_3:33999861-33999880 None:intergenic 30.0%
! ATCAAACTTAAGGGTATGTT+TGG + chr5_3:33995051-33995070 None:intergenic 30.0%
CCAAACTGAAATCAAACTTA+AGG + chr5_3:33995061-33995080 None:intergenic 30.0%
! CCTTAAGTTTGATTTCAGTT+TGG - chr5_3:33995058-33995077 Msa0808840:intron 30.0%
ACTTGACCATTACTGAAATT+CGG + chr5_3:34000055-34000074 None:intergenic 30.0%
TACTTCACTAAATCGATAGT+TGG - chr5_3:34000092-34000111 Msa0808840:intron 30.0%
!! AGTTTTTGAGAATCTAGTTG+AGG - chr5_3:33995671-33995690 Msa0808840:intron 30.0%
AACACTACAAACCAAAAAGA+GGG + chr5_3:33995860-33995879 None:intergenic 30.0%
AAACACTACAAACCAAAAAG+AGG + chr5_3:33995861-33995880 None:intergenic 30.0%
!! GTGCAACTTTTAGAAGTTTA+AGG + chr5_3:33996171-33996190 None:intergenic 30.0%
!!! AACACCCTTGATTTTGTTTT+TGG - chr5_3:34001018-34001037 Msa0808840:five_prime_UTR 30.0%
! ACACATTTAGTTCCTGAACT+TGG + chr5_3:33991396-33991415 None:intergenic 35.0%
TGAGGATATTCAAACACATG+TGG - chr5_3:33991419-33991438 Msa0808840:three_prime_UTR 35.0%
TCTTCACACTATTTCCACAA+AGG - chr5_3:33991479-33991498 Msa0808840:intron 35.0%
CAATTATTGTGATGAGGGTT+TGG - chr5_3:33991590-33991609 Msa0808840:three_prime_UTR 35.0%
CGATGATGAATTGTAGAAGA+AGG - chr5_3:33991762-33991781 Msa0808840:CDS 35.0%
CATGTGAACAGCAACAAATA+AGG + chr5_3:33991803-33991822 None:intergenic 35.0%
! TGGTCTAGATCTTTTCAACA+GGG + chr5_3:33991826-33991845 None:intergenic 35.0%
! TTGGTCTAGATCTTTTCAAC+AGG + chr5_3:33991827-33991846 None:intergenic 35.0%
GAAAAGATCTAGACCAAGTT+AGG - chr5_3:33991830-33991849 Msa0808840:CDS 35.0%
TACTTGGATCAATCCATTGT+TGG + chr5_3:33991932-33991951 None:intergenic 35.0%
!! AATGGATTGATCCAAGTAGT+AGG - chr5_3:33991934-33991953 Msa0808840:intron 35.0%
! ATGGATTGATCCAAGTAGTA+GGG - chr5_3:33991935-33991954 Msa0808840:intron 35.0%
ACCCTTTAAGCAAGTGATTA+GGG - chr5_3:33991965-33991984 Msa0808840:intron 35.0%
! GGGTGAATTGAAATTGGTTT+CGG - chr5_3:33992126-33992145 Msa0808840:intron 35.0%
AAAAAAATGAGGAGGTTCAG+GGG - chr5_3:33992175-33992194 Msa0808840:intron 35.0%
GAAGATGCATCTTGTTGATA+TGG + chr5_3:33992430-33992449 None:intergenic 35.0%
! ACAAGATGCATCTTCTTTTC+GGG - chr5_3:33992435-33992454 Msa0808840:intron 35.0%
GAAGATGCATCTTGTTGATA+TGG + chr5_3:33992430-33992449 None:intergenic 35.0%
! ACAAGATGCATCTTCTTTTC+GGG - chr5_3:33992435-33992454 Msa0808840:intron 35.0%
! AGTTAGGGATCTGATAATGA+CGG + chr5_3:33993121-33993140 None:intergenic 35.0%
! GATTAGTCATCACTAAACGA+CGG - chr5_3:33993211-33993230 Msa0808840:intron 35.0%
GGAAATAGGACTAAATAGAC+GGG + chr5_3:33993513-33993532 None:intergenic 35.0%
CGGAAATAGGACTAAATAGA+CGG + chr5_3:33993514-33993533 None:intergenic 35.0%
! TCAATACGTAGGTCTTTTAC+TGG - chr5_3:33993584-33993603 Msa0808840:intron 35.0%
AGCACATTGAAAACAGCTTA+TGG - chr5_3:33993818-33993837 Msa0808840:intron 35.0%
GCACATTGAAAACAGCTTAT+GGG - chr5_3:33993819-33993838 Msa0808840:intron 35.0%
AAGTGCTTATGAACCTGTTT+GGG + chr5_3:33993872-33993891 None:intergenic 35.0%
TAAGTGCTTATGAACCTGTT+TGG + chr5_3:33993873-33993892 None:intergenic 35.0%
TGTCCTTTGATACACAACTT+CGG - chr5_3:33994045-33994064 Msa0808840:intron 35.0%
TGTGAGAACACTCATACAAT+AGG + chr5_3:33994148-33994167 None:intergenic 35.0%
! TGATGAACGTTGTTTCCAAA+AGG + chr5_3:33994445-33994464 None:intergenic 35.0%
! GAAATTATGTGGCATGCTTT+TGG - chr5_3:33994515-33994534 Msa0808840:intron 35.0%
GAAAACTGGAATTTCAGCAA+AGG - chr5_3:33994585-33994604 Msa0808840:intron 35.0%
TGGAATTTCAGCAAAGGATT+GGG - chr5_3:33994591-33994610 Msa0808840:intron 35.0%
! GATTTGTTTGCTTTGGTTCA+AGG - chr5_3:33994729-33994748 Msa0808840:intron 35.0%
! TGTTAGAGGAGAATTTTGGA+GGG + chr5_3:33994944-33994963 None:intergenic 35.0%
! ATGTTAGAGGAGAATTTTGG+AGG + chr5_3:33994945-33994964 None:intergenic 35.0%
TTGGCAGAACTAAATGTTAG+AGG + chr5_3:33994958-33994977 None:intergenic 35.0%
TATGTTTGGGAATTCAAGAG+GGG + chr5_3:33995037-33995056 None:intergenic 35.0%
GTATGTTTGGGAATTCAAGA+GGG + chr5_3:33995038-33995057 None:intergenic 35.0%
TTCCATCCGAATTTCTGTAA+TGG - chr5_3:33995228-33995247 Msa0808840:intron 35.0%
TCGTGTAAAGAAGATACTCA+AGG + chr5_3:33995337-33995356 None:intergenic 35.0%
TAACCTGTTATACTTCCTCT+AGG - chr5_3:33995360-33995379 Msa0808840:intron 35.0%
! TTTCCTAGAGGAAGTATAAC+AGG + chr5_3:33995366-33995385 None:intergenic 35.0%
! TTTTTCCTTGACATTGCTAC+AGG - chr5_3:33995458-33995477 Msa0808840:intron 35.0%
! TTTTCCTTGACATTGCTACA+GGG - chr5_3:33995459-33995478 Msa0808840:intron 35.0%
AACTAAAACACAGAGACCAA+GGG + chr5_3:33995548-33995567 None:intergenic 35.0%
AAACTAAAACACAGAGACCA+AGG + chr5_3:33995549-33995568 None:intergenic 35.0%
! TAGTTTCTGGATTGCAACTT+TGG - chr5_3:33995563-33995582 Msa0808840:intron 35.0%
!! GGTGCAACTTTTAGAAGTTT+AGG + chr5_3:33996172-33996191 None:intergenic 35.0%
!! ATTTTCAATTTGGAACACCC+TGG - chr5_3:33996206-33996225 Msa0808840:intron 35.0%
!!! AACACCCTGGATTTTGTTTT+TGG - chr5_3:33996219-33996238 Msa0808840:intron 35.0%
GTCATCCAAAAACAAAATCC+AGG + chr5_3:33996227-33996246 None:intergenic 35.0%
CTACCCAAATGAATGGTTTA+TGG - chr5_3:33996246-33996265 Msa0808840:intron 35.0%
TCATTGGGAAAATGTCCAAT+TGG - chr5_3:33996284-33996303 Msa0808840:intron 35.0%
! TTTTATCAAGTCACACCTCA+AGG - chr5_3:33996506-33996525 Msa0808840:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr5_3:33996524-33996543 None:intergenic 35.0%
!!! GCACCTTATTGTTTTTAGGT+GGG + chr5_3:33996769-33996788 None:intergenic 35.0%
!!! TGCACCTTATTGTTTTTAGG+TGG + chr5_3:33996770-33996789 None:intergenic 35.0%
!!! GTTTTTTGGTCAAATCCAAG+TGG + chr5_3:33996809-33996828 None:intergenic 35.0%
AATCAACTTCAAATGGAAGG+AGG - chr5_3:33996846-33996865 Msa0808840:intron 35.0%
!!! CATTTTTTTGGGTGGATAGA+TGG - chr5_3:33997007-33997026 Msa0808840:intron 35.0%
! AGATATGTGTTTGCTAGGTT+TGG - chr5_3:33997104-33997123 Msa0808840:intron 35.0%
!! TGCAGTCTAATGTTTTTGAC+AGG - chr5_3:33997223-33997242 Msa0808840:intron 35.0%
!! AGTCTAATGTTTTTGACAGG+TGG - chr5_3:33997226-33997245 Msa0808840:intron 35.0%
!! ATATCAGGTGTTGACATCTA+TGG - chr5_3:33997293-33997312 Msa0808840:intron 35.0%
!! CTTTGAAGATTGTTTCTGGT+TGG + chr5_3:33997417-33997436 None:intergenic 35.0%
CAACCAGAAACAATCTTCAA+AGG - chr5_3:33997415-33997434 Msa0808840:intron 35.0%
CTTCACAATGGAGAAAGATA+TGG + chr5_3:33997506-33997525 None:intergenic 35.0%
! GGGTGAATTGAAATTGGTTT+CGG - chr5_3:33992126-33992145 Msa0808840:intron 35.0%
! AGTTAGGGATCTGATAATGA+CGG + chr5_3:33993121-33993140 None:intergenic 35.0%
! GATTAGTCATCACTAAACGA+CGG - chr5_3:33993211-33993230 Msa0808840:intron 35.0%
TCTACATTCGGAAAATAGAC+GGG + chr5_3:33998352-33998371 None:intergenic 35.0%
! TCAATACGTAGGTCTTTTAC+TGG - chr5_3:33993584-33993603 Msa0808840:intron 35.0%
AGCACATTGAAAACAGCTTA+TGG - chr5_3:33993818-33993837 Msa0808840:intron 35.0%
GCACATTGAAAACAGCTTAT+GGG - chr5_3:33993819-33993838 Msa0808840:intron 35.0%
AAGTGCTTATGAACCTGTTT+GGG + chr5_3:33993872-33993891 None:intergenic 35.0%
TAAGTGCTTATGAACCTGTT+TGG + chr5_3:33993873-33993892 None:intergenic 35.0%
TGTCCTTTGATACACAACTT+CGG - chr5_3:33994045-33994064 Msa0808840:intron 35.0%
! CATTTTCTTGAGCGTTTTTG+CGG - chr5_3:33998947-33998966 Msa0808840:intron 35.0%
! ATTTTCTTGAGCGTTTTTGC+GGG - chr5_3:33998948-33998967 Msa0808840:intron 35.0%
! TGATGAACGTTGTTTCCAAA+AGG + chr5_3:33994445-33994464 None:intergenic 35.0%
! GAAATTATGTGGCATGCTTT+TGG - chr5_3:33994515-33994534 Msa0808840:intron 35.0%
GAAAACTGGAATTTCAGCAA+AGG - chr5_3:33994585-33994604 Msa0808840:intron 35.0%
TGGAATTTCAGCAAAGGATT+GGG - chr5_3:33994591-33994610 Msa0808840:intron 35.0%
! GATTTGTTTGCTTTGGTTCA+AGG - chr5_3:33994729-33994748 Msa0808840:intron 35.0%
TTCCATCCGAATTTCAGTAA+TGG - chr5_3:34000046-34000065 Msa0808840:intron 35.0%
! TTTCCTAGAGGAAGTATAAC+AGG + chr5_3:33995366-33995385 None:intergenic 35.0%
! TTTTTCCTTGACATTGCTAC+AGG - chr5_3:33995458-33995477 Msa0808840:intron 35.0%
! TTTTCCTTGACATTGCTACA+GGG - chr5_3:33995459-33995478 Msa0808840:intron 35.0%
! TAGTTTCTGGATTGCAACTT+TGG - chr5_3:33995563-33995582 Msa0808840:intron 35.0%
ACAAACAAGAAACCAAGAAG+AGG - chr5_3:33995720-33995739 Msa0808840:intron 35.0%
TACATATTTCACACCCTTCA+CGG + chr5_3:34000638-34000657 None:intergenic 35.0%
TCAAAAAGAGTGAAACTCGA+GGG + chr5_3:34000672-34000691 None:intergenic 35.0%
TTCAAAAAGAGTGAAACTCG+AGG + chr5_3:34000673-34000692 None:intergenic 35.0%
! ATTTGGAATGCTTTGATAGC+AGG - chr5_3:34000934-34000953 Msa0808840:five_prime_UTR 35.0%
! TTTGGAATGCTTTGATAGCA+GGG - chr5_3:34000935-34000954 Msa0808840:five_prime_UTR 35.0%
TTTATGAGGGAACAGGGTTT+GGG + chr5_3:33991177-33991196 None:intergenic 40.0%
! TTTTATGAGGGAACAGGGTT+TGG + chr5_3:33991178-33991197 None:intergenic 40.0%
CAAGCAATGAAGTTAAGCGA+TGG - chr5_3:33991288-33991307 Msa0808840:three_prime_UTR 40.0%
AGGAACTAAATGTGTGTCTG+AGG - chr5_3:33991401-33991420 Msa0808840:three_prime_UTR 40.0%
GATTAGGGAACATACCTTTG+TGG + chr5_3:33991496-33991515 None:intergenic 40.0%
CTGGTTTAAGCTAAGGGTTA+AGG - chr5_3:33991622-33991641 Msa0808840:three_prime_UTR 40.0%
TAAGCTAAGGGTTAAGGAGT+TGG - chr5_3:33991628-33991647 Msa0808840:three_prime_UTR 40.0%
!! GAAGAAGGCCTGTTTGTTTT+TGG - chr5_3:33991777-33991796 Msa0808840:CDS 40.0%
TAAGAAAAGGGTCCCTAACT+TGG + chr5_3:33991846-33991865 None:intergenic 40.0%
TGGATTGATCCAAGTAGTAG+GGG - chr5_3:33991936-33991955 Msa0808840:intron 40.0%
GACCCTTTAAGCAAGTGATT+AGG - chr5_3:33991964-33991983 Msa0808840:intron 40.0%
CCCCTAATCACTTGCTTAAA+GGG + chr5_3:33991969-33991988 None:intergenic 40.0%
CCCTTTAAGCAAGTGATTAG+GGG - chr5_3:33991966-33991985 Msa0808840:intron 40.0%
ACCCCTAATCACTTGCTTAA+AGG + chr5_3:33991970-33991989 None:intergenic 40.0%
AAAAAATGAGGAGGTTCAGG+GGG - chr5_3:33992176-33992195 Msa0808840:intron 40.0%
! TGTTACACACGTGATAGTGA+GGG + chr5_3:33992213-33992232 None:intergenic 40.0%
TAGTAGGAACCGAAACACAT+CGG - chr5_3:33992326-33992345 Msa0808840:intron 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG - chr5_3:33992572-33992591 Msa0808840:CDS 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG - chr5_3:33992573-33992592 Msa0808840:CDS 40.0%
TAGTAGGAACCGAAACACAT+CGG - chr5_3:33992326-33992345 Msa0808840:intron 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG - chr5_3:33992572-33992591 Msa0808840:CDS 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG - chr5_3:33992573-33992592 Msa0808840:CDS 40.0%
AATCTTCATTGGAGAACCTG+CGG + chr5_3:33993195-33993214 None:intergenic 40.0%
! GTGGTTCTACATTCGGAAAT+AGG + chr5_3:33993527-33993546 None:intergenic 40.0%
GGTGCAACAATTCAATACGT+AGG - chr5_3:33993573-33993592 Msa0808840:intron 40.0%
TGAAGAGTGGATAAGCTTCT+TGG - chr5_3:33993774-33993793 Msa0808840:intron 40.0%
! CTTCTATGGGCTATTTGGAT+TGG + chr5_3:33993930-33993949 None:intergenic 40.0%
TCCAAATAGCCCATAGAAGA+TGG - chr5_3:33993931-33993950 Msa0808840:intron 40.0%
! ACCATCTTCTATGGGCTATT+TGG + chr5_3:33993935-33993954 None:intergenic 40.0%
AATAGCCCATAGAAGATGGT+AGG - chr5_3:33993935-33993954 Msa0808840:intron 40.0%
CCAAACCTACCATCTTCTAT+GGG + chr5_3:33993943-33993962 None:intergenic 40.0%
TCCAAACCTACCATCTTCTA+TGG + chr5_3:33993944-33993963 None:intergenic 40.0%
GTCCTTTGATACACAACTTC+GGG - chr5_3:33994046-33994065 Msa0808840:intron 40.0%
ATCCCGAAGTTGTGTATCAA+AGG + chr5_3:33994051-33994070 None:intergenic 40.0%
TTTGATACACAACTTCGGGA+TGG - chr5_3:33994050-33994069 Msa0808840:intron 40.0%
! TTGCAGGTAACATCTCCTTT+TGG - chr5_3:33994427-33994446 Msa0808840:intron 40.0%
TACCGAGAGTGGAAATTATG+TGG - chr5_3:33994504-33994523 Msa0808840:intron 40.0%
TGCCACATAATTTCCACTCT+CGG + chr5_3:33994509-33994528 None:intergenic 40.0%
! TTATGTGGCATGCTTTTGGA+TGG - chr5_3:33994519-33994538 Msa0808840:intron 40.0%
TGACACTTACACTACCTTCA+GGG + chr5_3:33994555-33994574 None:intergenic 40.0%
CTGGAATTTCAGCAAAGGAT+TGG - chr5_3:33994590-33994609 Msa0808840:intron 40.0%
!! AGGGTGTTGAACTTGAAATC+AGG - chr5_3:33994749-33994768 Msa0808840:intron 40.0%
TTCAAGAGGGGAAGAATTGA+GGG + chr5_3:33995025-33995044 None:intergenic 40.0%
ATTCAAGAGGGGAAGAATTG+AGG + chr5_3:33995026-33995045 None:intergenic 40.0%
GGTATGTTTGGGAATTCAAG+AGG + chr5_3:33995039-33995058 None:intergenic 40.0%
! TGTATTGACCATGTGATGCT+CGG - chr5_3:33995086-33995105 Msa0808840:intron 40.0%
GACCATTACAGAAATTCGGA+TGG + chr5_3:33995233-33995252 None:intergenic 40.0%
AAACAAATGCTAGAGTCGCT+TGG - chr5_3:33995509-33995528 Msa0808840:intron 40.0%
TGGTTTAGTATCATGTCCCT+TGG - chr5_3:33995529-33995548 Msa0808840:intron 40.0%
!!! GGTCTCTGTGTTTTAGTTTC+TGG - chr5_3:33995550-33995569 Msa0808840:intron 40.0%
GAGAATCTAGTTGAGGCAAA+AGG - chr5_3:33995678-33995697 Msa0808840:intron 40.0%
AGTTGAGGCAAAAGGAAACT+TGG - chr5_3:33995686-33995705 Msa0808840:intron 40.0%
TATAGAGCAGCTATGACAAC+TGG - chr5_3:33995903-33995922 Msa0808840:intron 40.0%
GTGTAGCAGGAAGTTTCTTT+GGG + chr5_3:33996086-33996105 None:intergenic 40.0%
TGTGTAGCAGGAAGTTTCTT+TGG + chr5_3:33996087-33996106 None:intergenic 40.0%
! ATCTGGAATGCTTTGATAGC+AGG - chr5_3:33996106-33996125 Msa0808840:intron 40.0%
! TCTGGAATGCTTTGATAGCA+GGG - chr5_3:33996107-33996126 Msa0808840:intron 40.0%
TGGATGACTACCCAAATGAA+TGG - chr5_3:33996239-33996258 Msa0808840:intron 40.0%
TAAAAGACACCTTCAAAGGG+TGG + chr5_3:33996491-33996510 None:intergenic 40.0%
GCACCCACCTAAAAACAATA+AGG - chr5_3:33996763-33996782 Msa0808840:intron 40.0%
!! TTTTGGGTGGATAGATGGTT+AGG - chr5_3:33997012-33997031 Msa0808840:intron 40.0%
GTCGCAAGATCAAATAAACG+CGG + chr5_3:33997063-33997082 None:intergenic 40.0%
GTAGCAGATATGTGTTTGCT+AGG - chr5_3:33997099-33997118 Msa0808840:intron 40.0%
! TATGTGTTTGCTAGGTTTGG+AGG - chr5_3:33997107-33997126 Msa0808840:intron 40.0%
!! ATGTTTTTGACAGGTGGCAA+TGG - chr5_3:33997232-33997251 Msa0808840:intron 40.0%
!! TGTTTTTGACAGGTGGCAAT+GGG - chr5_3:33997233-33997252 Msa0808840:intron 40.0%
!! ATGGAAGTACCCATTGTAGA+AGG - chr5_3:33997312-33997331 Msa0808840:intron 40.0%
TCTTCTCCTCCTTCTACAAT+GGG + chr5_3:33997324-33997343 None:intergenic 40.0%
AGAAACAATCTTCAAAGGCG+CGG - chr5_3:33997420-33997439 Msa0808840:intron 40.0%
ACAATGGAGAAAGATATGGG+AGG + chr5_3:33997502-33997521 None:intergenic 40.0%
GTTCTTTATGGCAACACATC+AGG - chr5_3:33997532-33997551 Msa0808840:intron 40.0%
AATCTTCATTGGAGAACCTG+CGG + chr5_3:33993195-33993214 None:intergenic 40.0%
GGTGCAACAATTCAATACGT+AGG - chr5_3:33993573-33993592 Msa0808840:intron 40.0%
TGAAGAGTGGATAAGCTTCT+TGG - chr5_3:33993774-33993793 Msa0808840:intron 40.0%
! CTTCTATGGGCTATTTGGAT+TGG + chr5_3:33993930-33993949 None:intergenic 40.0%
TCCAAATAGCCCATAGAAGA+TGG - chr5_3:33993931-33993950 Msa0808840:intron 40.0%
! ACCATCTTCTATGGGCTATT+TGG + chr5_3:33993935-33993954 None:intergenic 40.0%
AATAGCCCATAGAAGATGGT+AGG - chr5_3:33993935-33993954 Msa0808840:intron 40.0%
CCAAACCTACCATCTTCTAT+GGG + chr5_3:33993943-33993962 None:intergenic 40.0%
TCCAAACCTACCATCTTCTA+TGG + chr5_3:33993944-33993963 None:intergenic 40.0%
GTCCTTTGATACACAACTTC+GGG - chr5_3:33994046-33994065 Msa0808840:intron 40.0%
ATCCCGAAGTTGTGTATCAA+AGG + chr5_3:33994051-33994070 None:intergenic 40.0%
TTTGATACACAACTTCGGGA+TGG - chr5_3:33994050-33994069 Msa0808840:intron 40.0%
! TTGCAGGTAACATCTCCTTT+TGG - chr5_3:33994427-33994446 Msa0808840:intron 40.0%
TACCGAGAGTGGAAATTATG+TGG - chr5_3:33994504-33994523 Msa0808840:intron 40.0%
TGCCACATAATTTCCACTCT+CGG + chr5_3:33994509-33994528 None:intergenic 40.0%
! TTATGTGGCATGCTTTTGGA+TGG - chr5_3:33994519-33994538 Msa0808840:intron 40.0%
TGACACTTACACTACCTTCA+GGG + chr5_3:33994555-33994574 None:intergenic 40.0%
CTGGAATTTCAGCAAAGGAT+TGG - chr5_3:33994590-33994609 Msa0808840:intron 40.0%
!! AGGGTGTTGAACTTGAAATC+AGG - chr5_3:33994749-33994768 Msa0808840:intron 40.0%
TTTAAGAGGGGAAGAATCGA+GGG + chr5_3:33999847-33999866 None:intergenic 40.0%
ATTTAAGAGGGGAAGAATCG+AGG + chr5_3:33999848-33999867 None:intergenic 40.0%
GTATTTGACCATGTGATGCT+CGG - chr5_3:33999909-33999928 Msa0808840:intron 40.0%
GACCATTACTGAAATTCGGA+TGG + chr5_3:34000051-34000070 None:intergenic 40.0%
TCGTGTAATGAAGACACTCA+AGG + chr5_3:34000155-34000174 None:intergenic 40.0%
AGACCTGTTATACTTCCTCT+AGG - chr5_3:34000178-34000197 Msa0808840:intron 40.0%
TGGTTTAGTATCATGTCCCT+TGG - chr5_3:33995529-33995548 Msa0808840:intron 40.0%
AACTAAAACGCAGAGACCAA+GGG + chr5_3:34000365-34000384 None:intergenic 40.0%
AAACTAAAACGCAGAGACCA+AGG + chr5_3:34000366-34000385 None:intergenic 40.0%
GAGAATCTAGTTGAGGCAAA+AGG - chr5_3:33995678-33995697 Msa0808840:intron 40.0%
AGTTGAGGCAAAAGGAAACT+TGG - chr5_3:33995686-33995705 Msa0808840:intron 40.0%
AAGTCCGTAAGCATTCTGTT+AGG + chr5_3:34000583-34000602 None:intergenic 40.0%
! ACAGAATGCTTACGGACTTT+TGG - chr5_3:34000584-34000603 Msa0808840:intron 40.0%
! CAGAATGCTTACGGACTTTT+GGG - chr5_3:34000585-34000604 Msa0808840:intron 40.0%
CAAAAAGAGTGAAACTCGAG+GGG + chr5_3:34000671-34000690 None:intergenic 40.0%
TATAGAGCAGCTATGACAAC+TGG - chr5_3:33995903-33995922 Msa0808840:intron 40.0%
!! AGTGAGAGCACCAAAATGAT+AGG + chr5_3:34000855-34000874 None:intergenic 40.0%
GTGTAGCAGGAAGTTTCTTT+GGG + chr5_3:33996086-33996105 None:intergenic 40.0%
TGTGTAGCAGGAAGTTTCTT+TGG + chr5_3:33996087-33996106 None:intergenic 40.0%
GAAACTTCCTGCTACACATT+TGG - chr5_3:34000917-34000936 Msa0808840:five_prime_UTR 40.0%
AAGCATTCCAAATGTGTAGC+AGG + chr5_3:34000927-34000946 None:intergenic 40.0%
! TTGGAATGCTTTGATAGCAG+GGG - chr5_3:34000936-34000955 Msa0808840:five_prime_UTR 40.0%
! GAACAGGGTTTGGGTTTCTT+GGG + chr5_3:33991168-33991187 None:intergenic 45.0%
! TGGTTGACTCTTCCAAGTTC+AGG - chr5_3:33991381-33991400 Msa0808840:three_prime_UTR 45.0%
GAGGGTTTGGGTAGTTTAAC+TGG - chr5_3:33991603-33991622 Msa0808840:three_prime_UTR 45.0%
GGTTAAGGAGTTGGATGTTC+TGG - chr5_3:33991637-33991656 Msa0808840:three_prime_UTR 45.0%
!! TGGATGTTCTGGTTCAAACC+CGG - chr5_3:33991648-33991667 Msa0808840:three_prime_UTR 45.0%
TGATTAGGGGTTCGATCTAG+TGG - chr5_3:33991979-33991998 Msa0808840:intron 45.0%
! GTTACACACGTGATAGTGAG+GGG + chr5_3:33992212-33992231 None:intergenic 45.0%
! GTGTTACACACGTGATAGTG+AGG + chr5_3:33992214-33992233 None:intergenic 45.0%
AACCTTTCGTATCCACCTAG+CGG + chr5_3:33992259-33992278 None:intergenic 45.0%
TTAAACCGTTCCCCTTAGGT+CGG + chr5_3:33992283-33992302 None:intergenic 45.0%
TCGGTTCCTACTATTGTCGT+GGG + chr5_3:33992319-33992338 None:intergenic 45.0%
TTCGGTTCCTACTATTGTCG+TGG + chr5_3:33992320-33992339 None:intergenic 45.0%
CCTCTCATTCCGATGTGTTT+CGG + chr5_3:33992338-33992357 None:intergenic 45.0%
CGAAACACATCGGAATGAGA+GGG - chr5_3:33992336-33992355 Msa0808840:intron 45.0%
CATGTAGTCCCATACCTACA+CGG + chr5_3:33992371-33992390 None:intergenic 45.0%
GTATGGGACTACATGGTTGA+AGG - chr5_3:33992376-33992395 Msa0808840:intron 45.0%
!! TTTTCGGGAGCTCAATCCAT+AGG - chr5_3:33992450-33992469 Msa0808840:intron 45.0%
GCTTAACTGTGGAGTTCCTA+TGG + chr5_3:33992469-33992488 None:intergenic 45.0%
GCTTGGAGTAGTACTAGGAT+GGG - chr5_3:33992496-33992515 Msa0808840:intron 45.0%
CATGCTGAAAAGACTCGTGT+TGG - chr5_3:33992565-33992584 Msa0808840:CDS 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG - chr5_3:33992574-33992593 Msa0808840:CDS 45.0%
!! TGTTGGTTTGTGGGGTTAGT+CGG - chr5_3:33992582-33992601 Msa0808840:intron 45.0%
AACCTTTCGTATCCACCTAG+CGG + chr5_3:33992259-33992278 None:intergenic 45.0%
TTAAACCGTTCCCCTTAGGT+CGG + chr5_3:33992283-33992302 None:intergenic 45.0%
TCGGTTCCTACTATTGTCGT+GGG + chr5_3:33992319-33992338 None:intergenic 45.0%
TTCGGTTCCTACTATTGTCG+TGG + chr5_3:33992320-33992339 None:intergenic 45.0%
CCTCTCATTCCGATGTGTTT+CGG + chr5_3:33992338-33992357 None:intergenic 45.0%
CGAAACACATCGGAATGAGA+GGG - chr5_3:33992336-33992355 Msa0808840:intron 45.0%
GTATGGGACTACATGGTTGA+AGG - chr5_3:33992376-33992395 Msa0808840:intron 45.0%
!! TTTTCGGGAGCTCAATCCAT+AGG - chr5_3:33992450-33992469 Msa0808840:intron 45.0%
GCTTAACTGTGGAGTTCCTA+TGG + chr5_3:33992469-33992488 None:intergenic 45.0%
GCTTGGAGTAGTACTAGGAT+GGG - chr5_3:33992496-33992515 Msa0808840:intron 45.0%
CATGCTGAAAAGACTCGTGT+TGG - chr5_3:33992565-33992584 Msa0808840:CDS 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG - chr5_3:33992574-33992593 Msa0808840:CDS 45.0%
ATCTTCATTGGAGAACCTGC+GGG + chr5_3:33993194-33993213 None:intergenic 45.0%
GACGGGCATTCACAATTTGA+GGG + chr5_3:33993496-33993515 None:intergenic 45.0%
AGACGGGCATTCACAATTTG+AGG + chr5_3:33993497-33993516 None:intergenic 45.0%
CCCATAGAAGATGGTAGGTT+TGG - chr5_3:33993940-33993959 Msa0808840:intron 45.0%
GCATTTACAACTACCGAGAG+TGG - chr5_3:33994493-33994512 Msa0808840:intron 45.0%
ATGGAAGGAAAACACCCTGA+AGG - chr5_3:33994538-33994557 Msa0808840:intron 45.0%
CTGACACTTACACTACCTTC+AGG + chr5_3:33994556-33994575 None:intergenic 45.0%
GTGTAAGTGTCAGCCTTGAT+TGG - chr5_3:33994563-33994582 Msa0808840:intron 45.0%
GTCAGCCTTGATTGGAAAAC+TGG - chr5_3:33994571-33994590 Msa0808840:intron 45.0%
CTTGAAATCAGGAAGCTCGA+AGG - chr5_3:33994760-33994779 Msa0808840:intron 45.0%
! GGGAAGAATTGAGGGTTTTG+GGG + chr5_3:33995017-33995036 None:intergenic 45.0%
! GGGGAAGAATTGAGGGTTTT+GGG + chr5_3:33995018-33995037 None:intergenic 45.0%
! AGGGGAAGAATTGAGGGTTT+TGG + chr5_3:33995019-33995038 None:intergenic 45.0%
CTACAGGGAAGCAACAATGA+GGG - chr5_3:33995474-33995493 Msa0808840:intron 45.0%
! AAGAGCCACTCACATCGATT+AGG - chr5_3:33995737-33995756 Msa0808840:intron 45.0%
! AGAGCCACTCACATCGATTA+GGG - chr5_3:33995738-33995757 Msa0808840:intron 45.0%
GAAACTTCCTGCTACACATC+TGG - chr5_3:33996089-33996108 Msa0808840:intron 45.0%
AAGCATTCCAGATGTGTAGC+AGG + chr5_3:33996099-33996118 None:intergenic 45.0%
! CTGGAATGCTTTGATAGCAG+GGG - chr5_3:33996108-33996127 Msa0808840:intron 45.0%
TGTTACAAGCCACCCTTTGA+AGG - chr5_3:33996479-33996498 Msa0808840:intron 45.0%
AACTTCAAATGGAAGGAGGC+AGG - chr5_3:33996850-33996869 Msa0808840:intron 45.0%
ACTTCAAATGGAAGGAGGCA+GGG - chr5_3:33996851-33996870 Msa0808840:intron 45.0%
GAAGGAGGTAGCGAAGATTA+GGG - chr5_3:33996912-33996931 Msa0808840:intron 45.0%
GCGAAGATTAGGGATGGTAT+AGG - chr5_3:33996922-33996941 Msa0808840:intron 45.0%
GATTAGGGATGGTATAGGAG+AGG - chr5_3:33996927-33996946 Msa0808840:intron 45.0%
TTTGCTAGGTTTGGAGGAAG+AGG - chr5_3:33997113-33997132 Msa0808840:intron 45.0%
TTGCTAGGTTTGGAGGAAGA+GGG - chr5_3:33997114-33997133 Msa0808840:intron 45.0%
GAGTTGGAGGAGAAGACTTT+GGG - chr5_3:33997146-33997165 Msa0808840:intron 45.0%
!! CTTGGGAGGAAGACTTGTTA+GGG - chr5_3:33997169-33997188 Msa0808840:intron 45.0%
!! TTGGGAGGAAGACTTGTTAG+GGG - chr5_3:33997170-33997189 Msa0808840:intron 45.0%
!! AAGACTTGTTAGGGGAGTGT+AGG - chr5_3:33997178-33997197 Msa0808840:intron 45.0%
!! AGACTTGTTAGGGGAGTGTA+GGG - chr5_3:33997179-33997198 Msa0808840:intron 45.0%
TATAGCCTTCCTGGGGATTT+GGG + chr5_3:33997260-33997279 None:intergenic 45.0%
TCTCACTGTATAGCCTTCCT+GGG + chr5_3:33997268-33997287 None:intergenic 45.0%
! TACAGTGAGAGGTGCATATC+AGG - chr5_3:33997278-33997297 Msa0808840:intron 45.0%
! GAAGTACCCATTGTAGAAGG+AGG - chr5_3:33997315-33997334 Msa0808840:intron 45.0%
GTCTTCTCCTCCTTCTACAA+TGG + chr5_3:33997325-33997344 None:intergenic 45.0%
AAGGAGGAGAAGACCTCATA+TGG - chr5_3:33997331-33997350 Msa0808840:intron 45.0%
AGACCTCATATGGCACAAAC+AGG - chr5_3:33997341-33997360 Msa0808840:intron 45.0%
GAACCTGTTTGTGCCATATG+AGG + chr5_3:33997347-33997366 None:intergenic 45.0%
GCAAGGATGGAAACCTTCAA+CGG + chr5_3:33997369-33997388 None:intergenic 45.0%
TGAAGGTTTCCATCCTTGCT+TGG - chr5_3:33997370-33997389 Msa0808840:CDS 45.0%
! GCGCCTTTGAAGATTGTTTC+TGG + chr5_3:33997421-33997440 None:intergenic 45.0%
ACAGACATCACGTGTTTACC+AGG - chr5_3:33997456-33997475 Msa0808840:intron 45.0%
ATGGAGAAAGATATGGGAGG+CGG + chr5_3:33997499-33997518 None:intergenic 45.0%
ATCTTCATTGGAGAACCTGC+GGG + chr5_3:33993194-33993213 None:intergenic 45.0%
GACGGGCATTCACAATTTGA+GGG + chr5_3:33993496-33993515 None:intergenic 45.0%
AGACGGGCATTCACAATTTG+AGG + chr5_3:33993497-33993516 None:intergenic 45.0%
CCCATAGAAGATGGTAGGTT+TGG - chr5_3:33993940-33993959 Msa0808840:intron 45.0%
GCATTTACAACTACCGAGAG+TGG - chr5_3:33994493-33994512 Msa0808840:intron 45.0%
ATGGAAGGAAAACACCCTGA+AGG - chr5_3:33994538-33994557 Msa0808840:intron 45.0%
CTGACACTTACACTACCTTC+AGG + chr5_3:33994556-33994575 None:intergenic 45.0%
GTGTAAGTGTCAGCCTTGAT+TGG - chr5_3:33994563-33994582 Msa0808840:intron 45.0%
GTCAGCCTTGATTGGAAAAC+TGG - chr5_3:33994571-33994590 Msa0808840:intron 45.0%
CTTGAAATCAGGAAGCTCGA+AGG - chr5_3:33994760-33994779 Msa0808840:intron 45.0%
AAACAAATGCTCGAGTCGCT+TGG - chr5_3:34000326-34000345 Msa0808840:intron 45.0%
!!! GGTCTCTGCGTTTTAGTTTC+TGG - chr5_3:34000367-34000386 Msa0808840:intron 45.0%
!! AAGAGGCACTCACATCGATT+AGG - chr5_3:34000554-34000573 Msa0808840:intron 45.0%
!! AGAGGCACTCACATCGATTA+GGG - chr5_3:34000555-34000574 Msa0808840:intron 45.0%
! TTTGGGTTTCTTGGGAGGGT+AGG + chr5_3:33991160-33991179 None:intergenic 50.0%
! AGGGTTTGGGTTTCTTGGGA+GGG + chr5_3:33991164-33991183 None:intergenic 50.0%
! GGAACAGGGTTTGGGTTTCT+TGG + chr5_3:33991169-33991188 None:intergenic 50.0%
GGTCAAAGTCCCCTACTACT+TGG + chr5_3:33991948-33991967 None:intergenic 50.0%
GAACTCGTTACTTAGGGTCC+TGG + chr5_3:33992010-33992029 None:intergenic 50.0%
TTTGCACCACCAGCTCAAAG+AGG + chr5_3:33992152-33992171 None:intergenic 50.0%
GATATCGAAAGCCACGACGT+GGG + chr5_3:33992236-33992255 None:intergenic 50.0%
ACCTTTCGTATCCACCTAGC+GGG + chr5_3:33992258-33992277 None:intergenic 50.0%
TACGAAAGGTTCCCGACCTA+AGG - chr5_3:33992268-33992287 Msa0808840:intron 50.0%
ACGAAAGGTTCCCGACCTAA+GGG - chr5_3:33992269-33992288 Msa0808840:intron 50.0%
TAAACCGTTCCCCTTAGGTC+GGG + chr5_3:33992282-33992301 None:intergenic 50.0%
GGTTCCTACTATTGTCGTGG+GGG + chr5_3:33992317-33992336 None:intergenic 50.0%
CGGTTCCTACTATTGTCGTG+GGG + chr5_3:33992318-33992337 None:intergenic 50.0%
CCGAAACACATCGGAATGAG+AGG - chr5_3:33992335-33992354 Msa0808840:intron 50.0%
ACATCGGAATGAGAGGGATC+CGG - chr5_3:33992342-33992361 Msa0808840:intron 50.0%
CGTGTAGGTATGGGACTACA+TGG - chr5_3:33992369-33992388 Msa0808840:intron 50.0%
GGGACTACATGGTTGAAGGA+AGG - chr5_3:33992380-33992399 Msa0808840:intron 50.0%
ACTCCACAGTTAAGCGTGCT+TGG - chr5_3:33992474-33992493 Msa0808840:intron 50.0%
AAGCCAAGCACGCTTAACTG+TGG + chr5_3:33992480-33992499 None:intergenic 50.0%
ACAGTTAAGCGTGCTTGGCT+TGG - chr5_3:33992479-33992498 Msa0808840:intron 50.0%
!! GCTTGGCTTGGAGTAGTACT+AGG - chr5_3:33992491-33992510 Msa0808840:intron 50.0%
GGCTTGGAGTAGTACTAGGA+TGG - chr5_3:33992495-33992514 Msa0808840:intron 50.0%
TACTAGGATGGGTGACCTAC+CGG - chr5_3:33992507-33992526 Msa0808840:intron 50.0%
ATGCTTACCGGGAAACTTCC+CGG + chr5_3:33992529-33992548 None:intergenic 50.0%
TCCTCACTCACATGCTTACC+GGG + chr5_3:33992540-33992559 None:intergenic 50.0%
GTCCTCACTCACATGCTTAC+CGG + chr5_3:33992541-33992560 None:intergenic 50.0%
!! GGGTTAGTCGGCAATCATGT+AGG - chr5_3:33992594-33992613 Msa0808840:intron 50.0%
GGCAATCATGTAGGCAGTCT+GGG - chr5_3:33992603-33992622 Msa0808840:intron 50.0%
! GCAGTCTGGGATGTTACACT+TGG - chr5_3:33992616-33992635 Msa0808840:intron 50.0%
GATATCGAAAGCCACGACGT+GGG + chr5_3:33992236-33992255 None:intergenic 50.0%
ACCTTTCGTATCCACCTAGC+GGG + chr5_3:33992258-33992277 None:intergenic 50.0%
TACGAAAGGTTCCCGACCTA+AGG - chr5_3:33992268-33992287 Msa0808840:intron 50.0%
ACGAAAGGTTCCCGACCTAA+GGG - chr5_3:33992269-33992288 Msa0808840:intron 50.0%
TAAACCGTTCCCCTTAGGTC+GGG + chr5_3:33992282-33992301 None:intergenic 50.0%
GGTTCCTACTATTGTCGTGG+GGG + chr5_3:33992317-33992336 None:intergenic 50.0%
CGGTTCCTACTATTGTCGTG+GGG + chr5_3:33992318-33992337 None:intergenic 50.0%
CCGAAACACATCGGAATGAG+AGG - chr5_3:33992335-33992354 Msa0808840:intron 50.0%
ACATCGGAATGAGAGGGATC+CGG - chr5_3:33992342-33992361 Msa0808840:intron 50.0%
CATGTAGTCCCATACCTACG+CGG + chr5_3:33992849-33992868 None:intergenic 50.0%
GGGACTACATGGTTGAAGGA+AGG - chr5_3:33992380-33992399 Msa0808840:intron 50.0%
ACTCCACAGTTAAGCGTGCT+TGG - chr5_3:33992474-33992493 Msa0808840:intron 50.0%
AAGCCAAGCACGCTTAACTG+TGG + chr5_3:33992480-33992499 None:intergenic 50.0%
ACAGTTAAGCGTGCTTGGCT+TGG - chr5_3:33992479-33992498 Msa0808840:intron 50.0%
!! GCTTGGCTTGGAGTAGTACT+AGG - chr5_3:33992491-33992510 Msa0808840:intron 50.0%
GGCTTGGAGTAGTACTAGGA+TGG - chr5_3:33992495-33992514 Msa0808840:intron 50.0%
TACTAGGATGGGTGACCTAC+CGG - chr5_3:33992507-33992526 Msa0808840:intron 50.0%
ATGCTTACCGGGAAACTTCC+CGG + chr5_3:33992529-33992548 None:intergenic 50.0%
TCCTCACTCACATGCTTACC+GGG + chr5_3:33992540-33992559 None:intergenic 50.0%
GTCCTCACTCACATGCTTAC+CGG + chr5_3:33992541-33992560 None:intergenic 50.0%
!! TGTTGGTTTGTGGGGTCAGT+CGG - chr5_3:33993060-33993079 Msa0808840:intron 50.0%
TAACATCCCAGACTGCCTAC+AGG + chr5_3:33992612-33992631 None:intergenic 50.0%
CTAGGGGAGCTTATGAAGAG+TGG - chr5_3:33993761-33993780 Msa0808840:intron 50.0%
! GTGGCATGCTTTTGGATGGA+AGG - chr5_3:33994523-33994542 Msa0808840:intron 50.0%
ATCTCGAACCGAGCATCACA+TGG + chr5_3:33995097-33995116 None:intergenic 50.0%
! TGTGATGCTCGGTTCGAGAT+TGG - chr5_3:33995097-33995116 Msa0808840:intron 50.0%
GCTTCCCTGTAGCAATGTCA+AGG + chr5_3:33995466-33995485 None:intergenic 50.0%
GCTACAGGGAAGCAACAATG+AGG - chr5_3:33995473-33995492 Msa0808840:intron 50.0%
TCGATGTGAGTGGCTCTTCT+TGG + chr5_3:33995735-33995754 None:intergenic 50.0%
! GAATGCTTTGATAGCAGGGG+AGG - chr5_3:33996111-33996130 Msa0808840:intron 50.0%
GTTAGCAAGCTACACCCACT+TGG - chr5_3:33996791-33996810 Msa0808840:intron 50.0%
GGAAGGAGGTAGCGAAGATT+AGG - chr5_3:33996911-33996930 Msa0808840:intron 50.0%
GAGGTAGCGAAGATTAGGGA+TGG - chr5_3:33996916-33996935 Msa0808840:intron 50.0%
! ATGGTATAGGAGAGGCGCAT+GGG - chr5_3:33996935-33996954 Msa0808840:intron 50.0%
CGCGGATATCTCAGATGCAA+AGG + chr5_3:33997045-33997064 None:intergenic 50.0%
GGAGTTGGAGGAGAAGACTT+TGG - chr5_3:33997145-33997164 Msa0808840:intron 50.0%
GAGGAGAAGACTTTGGGCTT+GGG - chr5_3:33997152-33997171 Msa0808840:intron 50.0%
! GCTTGGGAGGAAGACTTGTT+AGG - chr5_3:33997168-33997187 Msa0808840:intron 50.0%
GTATAGCCTTCCTGGGGATT+TGG + chr5_3:33997261-33997280 None:intergenic 50.0%
CTCACTGTATAGCCTTCCTG+GGG + chr5_3:33997267-33997286 None:intergenic 50.0%
CTCTCACTGTATAGCCTTCC+TGG + chr5_3:33997269-33997288 None:intergenic 50.0%
CAGGAAGGCTATACAGTGAG+AGG - chr5_3:33997267-33997286 Msa0808840:intron 50.0%
GCACAAACAGGTTCCGTTGA+AGG - chr5_3:33997353-33997372 Msa0808840:CDS 50.0%
CAACAAACGCCAAGCAAGGA+TGG + chr5_3:33997382-33997401 None:intergenic 50.0%
CCTTCAACAAACGCCAAGCA+AGG + chr5_3:33997386-33997405 None:intergenic 50.0%
! CCTTGCTTGGCGTTTGTTGA+AGG - chr5_3:33997383-33997402 Msa0808840:CDS 50.0%
! CTTGGCGTTTGTTGAAGGAC+AGG - chr5_3:33997388-33997407 Msa0808840:CDS 50.0%
ATCACGTGTTTACCAGGCTG+CGG - chr5_3:33997462-33997481 Msa0808840:intron 50.0%
TATGGCAACACATCAGGTCG+TGG - chr5_3:33997538-33997557 Msa0808840:CDS 50.0%
CAACACATCAGGTCGTGGAT+TGG - chr5_3:33997543-33997562 Msa0808840:CDS 50.0%
!! AGGTCGTGGATTGGCATTTC+TGG - chr5_3:33997552-33997571 Msa0808840:CDS 50.0%
GAACTCGTTACTTAGGGTCC+TGG + chr5_3:33992010-33992029 None:intergenic 50.0%
TTTGCACCACCAGCTCAAAG+AGG + chr5_3:33992152-33992171 None:intergenic 50.0%
ATGAGGAGGTTCAGGGAGTT+CGG - chr5_3:33997909-33997928 Msa0808840:intron 50.0%
CTAGGGGAGCTTATGAAGAG+TGG - chr5_3:33993761-33993780 Msa0808840:intron 50.0%
! GTGGCATGCTTTTGGATGGA+AGG - chr5_3:33994523-33994542 Msa0808840:intron 50.0%
CAGGAAGCTCGAAGGAATAG+TGG - chr5_3:33994768-33994787 Msa0808840:intron 50.0%
! GGGAAGAATCGAGGGTTTTG+AGG + chr5_3:33999839-33999858 None:intergenic 50.0%
ATCTCGAACCGAGCATCACA+TGG + chr5_3:33995097-33995116 None:intergenic 50.0%
! TGTGATGCTCGGTTCGAGAT+TGG - chr5_3:33995097-33995116 Msa0808840:intron 50.0%
GCTTCCCTGTAGCAATGTCA+AGG + chr5_3:33995466-33995485 None:intergenic 50.0%
CTACAGGGAAGCAACGATGA+GGG - chr5_3:34000291-34000310 Msa0808840:intron 50.0%
TCGATGTGAGTGCCTCTTCT+TGG + chr5_3:34000552-34000571 None:intergenic 50.0%
GGCGCCTAACAGAATGCTTA+CGG - chr5_3:33995759-33995778 Msa0808840:intron 50.0%
ACATATGGCTTGAGCCGTGA+AGG - chr5_3:34000621-34000640 Msa0808840:intron 50.0%
CATATGGCTTGAGCCGTGAA+GGG - chr5_3:34000622-34000641 Msa0808840:intron 50.0%
! CAGGGTTTGGGTTTCTTGGG+AGG + chr5_3:33991165-33991184 None:intergenic 55.0%
TTCGATCTAGTGGCGTTGCC+AGG - chr5_3:33991989-33992008 Msa0808840:intron 55.0%
TGGTTTCGGCCTCTTTGAGC+TGG - chr5_3:33992140-33992159 Msa0808840:intron 55.0%
TTTCGGCCTCTTTGAGCTGG+TGG - chr5_3:33992143-33992162 Msa0808840:intron 55.0%
GGATATCGAAAGCCACGACG+TGG + chr5_3:33992237-33992256 None:intergenic 55.0%
GTGGCTTTCGATATCCCGCT+AGG - chr5_3:33992241-33992260 Msa0808840:intron 55.0%
GCTTTCGATATCCCGCTAGG+TGG - chr5_3:33992244-33992263 Msa0808840:intron 55.0%
TCCCGCTAGGTGGATACGAA+AGG - chr5_3:33992254-33992273 Msa0808840:intron 55.0%
CGAAAGGTTCCCGACCTAAG+GGG - chr5_3:33992270-33992289 Msa0808840:intron 55.0%
CGGCTTAAACCGTTCCCCTT+AGG + chr5_3:33992287-33992306 None:intergenic 55.0%
GGGAACGGTTTAAGCCGCAA+GGG - chr5_3:33992290-33992309 Msa0808840:intron 55.0%
ACTAGGATGGGTGACCTACC+GGG - chr5_3:33992508-33992527 Msa0808840:intron 55.0%
TGACCTACCGGGAAGTTTCC+CGG - chr5_3:33992519-33992538 Msa0808840:intron 55.0%
TTACCGGGAAACTTCCCGGT+AGG + chr5_3:33992525-33992544 None:intergenic 55.0%
TCCCGGTAAGCATGTGAGTG+AGG - chr5_3:33992536-33992555 Msa0808840:CDS 55.0%
CGGCAATCATGTAGGCAGTC+TGG - chr5_3:33992602-33992621 Msa0808840:intron 55.0%
AGAGCAGACCTCTCCCAGTA+CGG - chr5_3:33992643-33992662 Msa0808840:intron 55.0%
TCTCCCAGTACGGTGTGGTT+CGG - chr5_3:33992653-33992672 Msa0808840:intron 55.0%
GGATATCGAAAGCCACGACG+TGG + chr5_3:33992237-33992256 None:intergenic 55.0%
GTGGCTTTCGATATCCCGCT+AGG - chr5_3:33992241-33992260 Msa0808840:intron 55.0%
GCTTTCGATATCCCGCTAGG+TGG - chr5_3:33992244-33992263 Msa0808840:intron 55.0%
TCCCGCTAGGTGGATACGAA+AGG - chr5_3:33992254-33992273 Msa0808840:intron 55.0%
CGAAAGGTTCCCGACCTAAG+GGG - chr5_3:33992270-33992289 Msa0808840:intron 55.0%
CGGCTTAAACCGTTCCCCTT+AGG + chr5_3:33992287-33992306 None:intergenic 55.0%
GGGAACGGTTTAAGCCGCAA+GGG - chr5_3:33992290-33992309 Msa0808840:intron 55.0%
CGCGTAGGTATGGGACTACA+TGG - chr5_3:33992847-33992866 Msa0808840:CDS 55.0%
ACTAGGATGGGTGACCTACC+GGG - chr5_3:33992508-33992527 Msa0808840:intron 55.0%
TGACCTACCGGGAAGTTTCC+CGG - chr5_3:33992519-33992538 Msa0808840:intron 55.0%
TTACCGGGAAACTTCCCGGT+AGG + chr5_3:33992525-33992544 None:intergenic 55.0%
TCCCGGTAAGCATGTGAGTG+AGG - chr5_3:33992536-33992555 Msa0808840:CDS 55.0%
GGCAATCCTGTAGGCAGTCT+GGG - chr5_3:33993081-33993100 Msa0808840:intron 55.0%
! GGCAGTCTGGGATGTTACAC+TGG - chr5_3:33992615-33992634 Msa0808840:intron 55.0%
GAGGATCCACGTTGCAGTGA+GGG - chr5_3:33996130-33996149 Msa0808840:intron 55.0%
TCAAATGGAAGGAGGCAGGG+AGG - chr5_3:33996854-33996873 Msa0808840:intron 55.0%
TCCACCACGGTGAAACACTC+CGG + chr5_3:33996894-33996913 None:intergenic 55.0%
! GAGTGTTTCACCGTGGTGGA+AGG - chr5_3:33996894-33996913 Msa0808840:intron 55.0%
! TGTTTCACCGTGGTGGAAGG+AGG - chr5_3:33996897-33996916 Msa0808840:intron 55.0%
TTCGCTACCTCCTTCCACCA+CGG + chr5_3:33996907-33996926 None:intergenic 55.0%
! GATGGTATAGGAGAGGCGCA+TGG - chr5_3:33996934-33996953 Msa0808840:intron 55.0%
! TGGTATAGGAGAGGCGCATG+GGG - chr5_3:33996936-33996955 Msa0808840:intron 55.0%
GGAGGGTCTCGAAGGTGATA+GGG - chr5_3:33996971-33996990 Msa0808840:intron 55.0%
GAGGGTCTCGAAGGTGATAG+GGG - chr5_3:33996972-33996991 Msa0808840:intron 55.0%
GTCTCGAAGGTGATAGGGGA+TGG - chr5_3:33996976-33996995 Msa0808840:intron 55.0%
AGGTTTGGAGGAAGAGGGAG+AGG - chr5_3:33997119-33997138 Msa0808840:intron 55.0%
GGAGGAGAAGACTTTGGGCT+TGG - chr5_3:33997151-33997170 Msa0808840:intron 55.0%
GAGAAGACTTTGGGCTTGGG+AGG - chr5_3:33997155-33997174 Msa0808840:intron 55.0%
ACGTGATGTCTGTAGCCGCA+AGG + chr5_3:33997449-33997468 None:intergenic 55.0%
GTGTTTACCAGGCTGCGGTA+TGG - chr5_3:33997467-33997486 Msa0808840:intron 55.0%
TTTACCAGGCTGCGGTATGG+AGG - chr5_3:33997470-33997489 Msa0808840:intron 55.0%
TCATTCTCTCGGCCACTCGA+AGG - chr5_3:33997617-33997636 Msa0808840:CDS 55.0%
!! CTTTACTCGAAGGCGTTGCC+AGG - chr5_3:33997717-33997736 Msa0808840:CDS 55.0%
TGGTTTCGGCCTCTTTGAGC+TGG - chr5_3:33992140-33992159 Msa0808840:intron 55.0%
TTTCGGCCTCTTTGAGCTGG+TGG - chr5_3:33992143-33992162 Msa0808840:intron 55.0%
CTGAACCCCTCACTATCACG+TGG - chr5_3:33992204-33992223 Msa0808840:intron 55.0%
! ACGGAGCCACGTGATAGTGA+GGG + chr5_3:33997941-33997960 None:intergenic 55.0%
GCTACAGGGAAGCAACGATG+AGG - chr5_3:34000290-34000309 Msa0808840:intron 55.0%
CGTGTGTAACACCCACGTCG+TGG - chr5_3:33992222-33992241 Msa0808840:intron 60.0%
GGTTCCCGACCTAAGGGGAA+CGG - chr5_3:33992275-33992294 Msa0808840:intron 60.0%
GGGGAACGGTTTAAGCCGCA+AGG - chr5_3:33992289-33992308 Msa0808840:intron 60.0%
ATTGTCGTGGGGGTCCCTTG+CGG + chr5_3:33992307-33992326 None:intergenic 60.0%
GGGACCCCCACGACAATAGT+AGG - chr5_3:33992310-33992329 Msa0808840:intron 60.0%
TCGGAATGAGAGGGATCCGG+AGG - chr5_3:33992345-33992364 Msa0808840:intron 60.0%
ATCCGGAGGCCGTGTAGGTA+TGG - chr5_3:33992359-33992378 Msa0808840:intron 60.0%
TCCGGAGGCCGTGTAGGTAT+GGG - chr5_3:33992360-33992379 Msa0808840:intron 60.0%
TCCCATACCTACACGGCCTC+CGG + chr5_3:33992364-33992383 None:intergenic 60.0%
AGACCTCTCCCAGTACGGTG+TGG - chr5_3:33992648-33992667 Msa0808840:intron 60.0%
GAACCACACCGTACTGGGAG+AGG + chr5_3:33992654-33992673 None:intergenic 60.0%
CTCCCAGTACGGTGTGGTTC+GGG - chr5_3:33992654-33992673 Msa0808840:intron 60.0%
TCCCAGTACGGTGTGGTTCG+GGG - chr5_3:33992655-33992674 Msa0808840:intron 60.0%
TCCCCGAACCACACCGTACT+GGG + chr5_3:33992659-33992678 None:intergenic 60.0%
GGCATGTAACACCCACGTCG+TGG - chr5_3:33992700-33992719 Msa0808840:intron 60.0%
GGTTCCCGACCTAAGGGGAA+CGG - chr5_3:33992275-33992294 Msa0808840:intron 60.0%
GGGGAACGGTTTAAGCCGCA+AGG - chr5_3:33992289-33992308 Msa0808840:intron 60.0%
ATTGTCGTGGGGGTCCCTTG+CGG + chr5_3:33992307-33992326 None:intergenic 60.0%
GGGACCCCCACGACAATAGT+AGG - chr5_3:33992310-33992329 Msa0808840:intron 60.0%
TCGGAATGAGAGGGATCCGG+AGG - chr5_3:33992345-33992364 Msa0808840:intron 60.0%
GGGTCAGTCGGCAATCCTGT+AGG - chr5_3:33993072-33993091 Msa0808840:intron 60.0%
CGGCAATCCTGTAGGCAGTC+TGG - chr5_3:33993080-33993099 Msa0808840:intron 60.0%
ATCCATACCGTGTGTCCCGC+AGG - chr5_3:33993176-33993195 Msa0808840:intron 60.0%
AACCTGCGGGACACACGGTA+TGG + chr5_3:33993181-33993200 None:intergenic 60.0%
TGGAGAACCTGCGGGACACA+CGG + chr5_3:33993186-33993205 None:intergenic 60.0%
GGCGCCCTAATCGATGTGAG+TGG + chr5_3:33995745-33995764 None:intergenic 60.0%
GGAGGATCCACGTTGCAGTG+AGG - chr5_3:33996129-33996148 Msa0808840:intron 60.0%
TGCACACCCTCACTGCAACG+TGG + chr5_3:33996139-33996158 None:intergenic 60.0%
ATGGAAGGAGGCAGGGAGGT+TGG - chr5_3:33996858-33996877 Msa0808840:intron 60.0%
AGGCAGGGAGGTTGGAGGTT+GGG - chr5_3:33996866-33996885 Msa0808840:intron 60.0%
! GGTATAGGAGAGGCGCATGG+GGG - chr5_3:33996937-33996956 Msa0808840:intron 60.0%
! GTTTGCTGGGAGGGTCTCGA+AGG - chr5_3:33996963-33996982 Msa0808840:intron 60.0%
GGGAGGGTCTCGAAGGTGAT+AGG - chr5_3:33996970-33996989 Msa0808840:intron 60.0%
! AAGAGGGAGAGGCGTGGAGT+TGG - chr5_3:33997130-33997149 Msa0808840:intron 60.0%
GCAATGGGACCCAAATCCCC+AGG - chr5_3:33997248-33997267 Msa0808840:intron 60.0%
TGGGACCCAAATCCCCAGGA+AGG - chr5_3:33997252-33997271 Msa0808840:intron 60.0%
! TCAAAGGCGCGGCATCCTTG+CGG - chr5_3:33997431-33997450 Msa0808840:intron 60.0%
GTTTCCTCCATACCGCAGCC+TGG + chr5_3:33997477-33997496 None:intergenic 60.0%
AAGATCGTCGCGCCTTCGAG+TGG + chr5_3:33997632-33997651 None:intergenic 60.0%
! CGGAGCCACGTGATAGTGAG+GGG + chr5_3:33997940-33997959 None:intergenic 60.0%
! GACGGAGCCACGTGATAGTG+AGG + chr5_3:33997942-33997961 None:intergenic 60.0%
ATCCATACCGTGTGTCCCGC+AGG - chr5_3:33993176-33993195 Msa0808840:intron 60.0%
AACCTGCGGGACACACGGTA+TGG + chr5_3:33993181-33993200 None:intergenic 60.0%
TGGAGAACCTGCGGGACACA+CGG + chr5_3:33993186-33993205 None:intergenic 60.0%
GTCCCCGAACCACACCGTAC+TGG + chr5_3:33992660-33992679 None:intergenic 65.0%
! GTGTGGTTCGGGGACGAACC+AGG - chr5_3:33992665-33992684 Msa0808840:intron 65.0%
! TGGTTCGGGGACGAACCAGG+CGG - chr5_3:33992668-33992687 Msa0808840:intron 65.0%
ACGAACCAGGCGGAAGCTGG+TGG - chr5_3:33992678-33992697 Msa0808840:intron 65.0%
CGAACCAGGCGGAAGCTGGT+GGG - chr5_3:33992679-33992698 Msa0808840:intron 65.0%
ATCCGGAGGCCGCGTAGGTA+TGG - chr5_3:33992837-33992856 Msa0808840:CDS 65.0%
TCCGGAGGCCGCGTAGGTAT+GGG - chr5_3:33992838-33992857 Msa0808840:CDS 65.0%
TCCCATACCTACGCGGCCTC+CGG + chr5_3:33992842-33992861 None:intergenic 65.0%
GAAGGAGGCAGGGAGGTTGG+AGG - chr5_3:33996861-33996880 Msa0808840:intron 65.0%
GAGGCAGGGAGGTTGGAGGT+TGG - chr5_3:33996865-33996884 Msa0808840:intron 65.0%
GGCAGGGAGGTTGGAGGTTG+GGG - chr5_3:33996867-33996886 Msa0808840:intron 65.0%
GCAGGGAGGTTGGAGGTTGG+GGG - chr5_3:33996868-33996887 Msa0808840:intron 65.0%
! GCCGGAGTGTTTCACCGTGG+TGG - chr5_3:33996890-33996909 Msa0808840:intron 65.0%
!! CGCATGGGGGCTGGTTTGCT+GGG - chr5_3:33996950-33996969 Msa0808840:intron 65.0%
!! ATGGGGGCTGGTTTGCTGGG+AGG - chr5_3:33996953-33996972 Msa0808840:intron 65.0%
!! TGGGGGCTGGTTTGCTGGGA+GGG - chr5_3:33996954-33996973 Msa0808840:intron 65.0%
TGGAGGAAGAGGGAGAGGCG+TGG - chr5_3:33997124-33997143 Msa0808840:intron 65.0%
! AGGGAGAGGCGTGGAGTTGG+AGG - chr5_3:33997133-33997152 Msa0808840:intron 65.0%
GAGGGATCCGGAGGCCGTGT+AGG - chr5_3:33992354-33992373 Msa0808840:intron 70.0%
GGGACGAACCAGGCGGAAGC+TGG - chr5_3:33992675-33992694 Msa0808840:intron 70.0%
CATGCCCACCAGCTTCCGCC+TGG + chr5_3:33992686-33992705 None:intergenic 70.0%
GGAGGTTGGAGGTTGGGGGC+CGG - chr5_3:33996872-33996891 Msa0808840:intron 70.0%
! GGGGCCGGAGTGTTTCACCG+TGG - chr5_3:33996887-33996906 Msa0808840:intron 70.0%
! TAGGAGAGGCGCATGGGGGC+TGG - chr5_3:33996941-33996960 Msa0808840:intron 70.0%
!! GCGCATGGGGGCTGGTTTGC+TGG - chr5_3:33996949-33996968 Msa0808840:intron 70.0%
GAGGGATCCGGAGGCCGCGT+AGG - chr5_3:33992832-33992851 Msa0808840:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 33991127 34001050 33991127 ID=Msa0808840;Name=Msa0808840
chr5_3 mRNA 33991127 34001050 33991127 ID=Msa0808840-mRNA-1;Parent=Msa0808840;Name=Msa0808840-mRNA-1;_AED=0.22;_eAED=0.22;_QI=167|0.85|0.87|1|0.85|0.75|8|588|314
chr5_3 exon 33991127 33991468 33991127 ID=Msa0808840-mRNA-1:exon:10932;Parent=Msa0808840-mRNA-1
chr5_3 exon 33991490 33991880 33991490 ID=Msa0808840-mRNA-1:exon:10931;Parent=Msa0808840-mRNA-1
chr5_3 exon 33992521 33992597 33992521 ID=Msa0808840-mRNA-1:exon:10930;Parent=Msa0808840-mRNA-1
chr5_3 exon 33992705 33992914 33992705 ID=Msa0808840-mRNA-1:exon:10929;Parent=Msa0808840-mRNA-1
chr5_3 exon 33996679 33996697 33996679 ID=Msa0808840-mRNA-1:exon:10928;Parent=Msa0808840-mRNA-1
chr5_3 exon 33997350 33997426 33997350 ID=Msa0808840-mRNA-1:exon:10927;Parent=Msa0808840-mRNA-1
chr5_3 exon 33997535 33997744 33997535 ID=Msa0808840-mRNA-1:exon:10926;Parent=Msa0808840-mRNA-1
chr5_3 exon 34000677 34001050 34000677 ID=Msa0808840-mRNA-1:exon:10925;Parent=Msa0808840-mRNA-1
chr5_3 five_prime_UTR 34000884 34001050 34000884 ID=Msa0808840-mRNA-1:five_prime_utr;Parent=Msa0808840-mRNA-1
chr5_3 CDS 34000677 34000883 34000677 ID=Msa0808840-mRNA-1:cds;Parent=Msa0808840-mRNA-1
chr5_3 CDS 33997535 33997744 33997535 ID=Msa0808840-mRNA-1:cds;Parent=Msa0808840-mRNA-1
chr5_3 CDS 33997350 33997426 33997350 ID=Msa0808840-mRNA-1:cds;Parent=Msa0808840-mRNA-1
chr5_3 CDS 33996679 33996697 33996679 ID=Msa0808840-mRNA-1:cds;Parent=Msa0808840-mRNA-1
chr5_3 CDS 33992705 33992914 33992705 ID=Msa0808840-mRNA-1:cds;Parent=Msa0808840-mRNA-1
chr5_3 CDS 33992521 33992597 33992521 ID=Msa0808840-mRNA-1:cds;Parent=Msa0808840-mRNA-1
chr5_3 CDS 33991736 33991880 33991736 ID=Msa0808840-mRNA-1:cds;Parent=Msa0808840-mRNA-1
chr5_3 three_prime_UTR 33991490 33991735 33991490 ID=Msa0808840-mRNA-1:three_prime_utr;Parent=Msa0808840-mRNA-1
chr5_3 three_prime_UTR 33991127 33991468 33991127 ID=Msa0808840-mRNA-1:three_prime_utr;Parent=Msa0808840-mRNA-1
Gene Sequence

>Msa0808840

ATGAAGTTAAGCGATGGAAGTGAAATCACTACTATGCTAGTATTGTTATTGTGCTTAACAACTCTCTTTCTAAAAACAGAAGCTATATGGTTGACTCTTCCAAGTTCAGGAACTAAATGTGTGTCTGAGGATATTCAAACACATGTGGTTGTTTTAGCTGATTACTATGTTGTAACTGATGAAGGTCTTCACACTATTTCCACAAAGGTAACATCTCCTTTTGGAAACAACGTTCATCATAATGAAAATGTTACACAAGGACAGTTTGCATTTACAACTACCGAGAGTGGAAATTATGTGGCATGCTTTTGGATGGAAGGAAAACACCCTGAAGGTAGTGTAAGTGTCAGCCTTGATTGGAAAACTGGAATTTCAGCAAAGGATTGGGATTCTGTTGCAAAGAAAGAAAAGATTGAGGGTGTTGAACTTGAAATCAGGAAGCTCGAAGGAATAGTAGATGCCATCCACGATTATCTAATTTATTTGAAGGAAAAGGAAGCAACAATGAGGGAAGTAACATCTCCTTTTGGAAACAACGTTCATCATAATGAAAATGTTACACAAGGACAGTTTGCATTTACAACTACCGAGAGTGGAAATTATGTGGCATGCTTTTGGATGGAAGGAAAACACCCTGAAGGTAGTGTAAGTGTCAGCCTTGATTGGAAAACTGGAATTTCAGCAAAGGATTGGGATTCTGTTGCAAAGAAAGAAAAGATTGAGGGTGTTGAACTTGAAATCAGGAAGCTCGAAGGAATAGTGGATGCCATCCACGATTATCTAATTTATTTGAAGGAAAAGGAAGCAACGATGAGGGAAGTGAGTGAGAAAACAAATGCTCGAGTCGCTTGGTTTAGTATCATGTCCCTTGGTCTCTGCGTTTTAGTTTCTGGATTGCAACTTTGGTATCTACAGCGCTACTTTCGAAAGAAGAAGCTCATATAG
Protein sequence

>Msa0808840

MKLSDGSEITTMLVLLLCLTTLFLKTEAIWLTLPSSGTKCVSEDIQTHVVVLADYYVVTDEGLHTISTKVTSPFGNNVHHNENVTQGQFAFTTTESGNYVACFWMEGKHPEGSVSVSLDWKTGISAKDWDSVAKKEKIEGVELEIRKLEGIVDAIHDYLIYLKEKEATMREVTSPFGNNVHHNENVTQGQFAFTTTESGNYVACFWMEGKHPEGSVSVSLDWKTGISAKDWDSVAKKEKIEGVELEIRKLEGIVDAIHDYLIYLKEKEATMREVSEKTNARVAWFSIMSLGLCVLVSGLQLWYLQRYFRKKKLI*