AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0734390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734390 MtrunA17_Chr5g0430481 98.942 378 4 0 1 378 1 378 0.0 775
Msa0734390 MtrunA17_Chr3g0105371 62.632 380 102 4 1 378 1 342 3.54e-163 460
Msa0734390 MtrunA17_Chr3g0105351 73.810 294 75 2 87 378 25 318 1.74e-162 457
Msa0734390 MtrunA17_Chr1g0150451 40.392 255 139 4 124 374 78 323 6.79e-56 186
Msa0734390 MtrunA17_Chr3g0136711 39.608 255 141 4 124 374 35 280 1.07e-54 182
Msa0734390 MtrunA17_Chr1g0212961 39.062 256 137 7 123 374 97 337 7.50e-54 181
Msa0734390 MtrunA17_Chr3g0126511 38.760 258 143 5 123 376 96 342 8.07e-51 174
Msa0734390 MtrunA17_Chr4g0065141 36.704 267 133 7 131 372 93 348 1.18e-45 160
Msa0734390 MtrunA17_Chr5g0426141 38.996 259 140 10 124 375 35 282 4.39e-45 156
Msa0734390 MtrunA17_Chr4g0070871 38.976 254 121 6 154 375 253 504 2.43e-44 160
Msa0734390 MtrunA17_Chr3g0115851 37.984 258 144 8 124 375 35 282 9.00e-44 153
Msa0734390 MtrunA17_Chr2g0317021 39.147 258 141 8 124 375 86 333 4.26e-43 152
Msa0734390 MtrunA17_Chr4g0050381 37.931 261 140 11 124 375 30 277 6.68e-43 150
Msa0734390 MtrunA17_Chr8g0360351 38.521 257 142 7 124 374 35 281 3.60e-41 146
Msa0734390 MtrunA17_Chr3g0112291 32.277 347 186 9 64 376 46 377 1.79e-39 144
Msa0734390 MtrunA17_Chr2g0279151 38.710 248 131 8 136 375 47 281 4.20e-39 140
Msa0734390 MtrunA17_Chr3g0138281 36.226 265 135 7 131 372 90 343 7.66e-39 142
Msa0734390 MtrunA17_Chr1g0171571 33.459 266 155 4 124 375 388 645 7.99e-39 147
Msa0734390 MtrunA17_Chr2g0299981 32.588 313 139 9 131 375 228 536 1.06e-37 142
Msa0734390 MtrunA17_Chr2g0293811 33.735 249 142 5 143 374 89 331 2.78e-37 138
Msa0734390 MtrunA17_Chr4g0051661 38.589 241 134 8 136 372 165 395 3.50e-36 135
Msa0734390 MtrunA17_Chr3g0135961 33.969 262 136 7 149 375 281 540 4.35e-36 138
Msa0734390 MtrunA17_Chr5g0407161 32.950 261 150 7 129 372 91 343 1.46e-35 134
Msa0734390 MtrunA17_Chr1g0150781 31.915 329 158 10 107 375 222 544 4.75e-35 135
Msa0734390 MtrunA17_Chr5g0435721 37.131 237 129 5 124 343 193 426 5.77e-35 134
Msa0734390 MtrunA17_Chr1g0158781 37.405 262 146 6 131 375 120 380 7.43e-35 132
Msa0734390 MtrunA17_Chr1g0194191 31.868 273 155 7 127 374 83 349 6.56e-34 129
Msa0734390 MtrunA17_Chr3g0144111 34.513 226 116 5 153 372 26 225 2.93e-33 124
Msa0734390 MtrunA17_Chr8g0389921 34.855 241 139 5 152 375 196 435 2.29e-32 126
Msa0734390 MtrunA17_Chr7g0263281 34.529 223 104 6 154 335 71 292 4.90e-32 124
Msa0734390 MtrunA17_Chr1g0150071 32.609 276 114 9 124 337 24 289 2.28e-31 122
Msa0734390 MtrunA17_Chr3g0136811 31.655 278 119 9 124 339 24 292 2.01e-30 119
Msa0734390 MtrunA17_Chr3g0127091 30.822 292 146 10 130 374 67 349 6.23e-29 115
Msa0734390 MtrunA17_Chr4g0001761 30.515 272 119 8 124 334 24 286 2.17e-28 114
Msa0734390 MtrunA17_Chr1g0213351 30.769 286 140 10 145 374 71 354 4.51e-28 113
Msa0734390 MtrunA17_Chr1g0181901 31.839 223 110 6 154 335 76 297 2.38e-27 111
Msa0734390 MtrunA17_Chr5g0396731 33.094 278 145 7 131 374 80 350 2.71e-27 110
Msa0734390 MtrunA17_Chr7g0256751 34.836 244 114 8 134 336 52 291 5.03e-27 111
Msa0734390 MtrunA17_Chr1g0211251 30.804 224 113 6 154 336 81 303 2.26e-25 106
Msa0734390 MtrunA17_Chr3g0089721 32.922 243 118 9 136 337 53 291 3.92e-25 105
Msa0734390 MtrunA17_Chr7g0256771 32.319 263 123 10 134 353 53 303 6.03e-25 103
Msa0734390 MtrunA17_Chr3g0089711 32.510 243 119 9 136 337 53 291 6.92e-25 104
Msa0734390 MtrunA17_Chr2g0286951 29.801 302 151 13 124 375 52 342 1.83e-24 103
Msa0734390 MtrunA17_Chr1g0175381 29.032 279 141 9 153 376 78 354 2.71e-24 102
Msa0734390 MtrunA17_Chr4g0066371 28.873 284 146 11 137 375 69 341 3.55e-24 102
Msa0734390 MtrunA17_Chr7g0271971 30.364 247 143 8 148 374 60 297 7.93e-24 102
Msa0734390 MtrunA17_Chr1g0207571 30.131 229 114 6 154 338 61 287 3.07e-23 99.8
Msa0734390 MtrunA17_Chr7g0250061 30.357 224 114 8 154 336 76 298 3.58e-23 99.8
Msa0734390 MtrunA17_Chr6g0483411 29.237 236 137 7 130 338 51 283 3.91e-22 95.9
Msa0734390 MtrunA17_Chr8g0371321 29.018 224 117 6 154 336 79 301 7.67e-22 95.9
Msa0734390 MtrunA17_Chr1g0192471 27.737 274 166 10 124 374 33 297 5.43e-21 94.0
Msa0734390 MtrunA17_Chr1g0209451 26.199 271 171 7 123 374 37 297 1.78e-20 92.4
Msa0734390 MtrunA17_Chr2g0294291 28.889 225 119 6 154 337 75 299 1.99e-20 91.7
Msa0734390 MtrunA17_Chr4g0004971 29.020 255 135 9 125 334 49 302 5.35e-20 90.1
Msa0734390 MtrunA17_Chr7g0225501 31.048 248 144 10 148 374 78 319 7.60e-20 90.5
Msa0734390 MtrunA17_Chr3g0133801 28.395 243 151 9 148 374 60 295 2.69e-19 89.0
Msa0734390 MtrunA17_Chr1g0153671 28.807 243 150 9 148 374 59 294 3.17e-19 88.6
Msa0734390 MtrunA17_Chr7g0243571 27.863 262 136 10 125 334 63 323 1.32e-16 80.9
Msa0734390 MtrunA17_Chr1g0192421 28.188 298 171 12 117 372 52 348 2.31e-16 79.7
Msa0734390 MtrunA17_Chr4g0063111 31.321 265 130 14 136 362 60 310 2.66e-16 80.5
Msa0734390 MtrunA17_Chr4g0067711 27.652 264 143 11 116 334 51 311 3.90e-16 79.0
Msa0734390 MtrunA17_Chr7g0272061 27.508 309 172 13 117 374 54 361 5.77e-16 78.6
Msa0734390 MtrunA17_Chr6g0486661 28.253 269 140 10 151 374 121 381 1.13e-15 79.0
Msa0734390 MtrunA17_Chr2g0295401 25.436 287 171 12 126 370 64 349 1.94e-15 77.0
Msa0734390 MtrunA17_Chr3g0089691 31.088 193 92 7 186 337 13 205 5.34e-15 75.1
Msa0734390 MtrunA17_Chr7g0221691 26.937 271 135 10 125 334 100 368 2.63e-14 73.9
Msa0734390 MtrunA17_Chr1g0151781 30.556 252 131 11 125 335 40 288 5.28e-14 72.4
Msa0734390 MtrunA17_Chr1g0185141 24.632 272 142 9 161 377 178 441 2.01e-13 72.0
Msa0734390 MtrunA17_Chr7g0249421 25.899 278 137 10 125 334 67 343 1.98e-12 68.6
Msa0734390 MtrunA17_Chr5g0394181 27.407 270 165 13 131 377 339 600 2.51e-11 65.1
Msa0734390 MtrunA17_Chr1g0187481 23.913 230 145 6 149 374 74 277 3.30e-11 63.5
Msa0734390 MtrunA17_Chr4g0068971 30.469 128 77 3 253 374 110 231 5.01e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734390 AT1G07160.1 62.725 389 121 7 1 376 1 378 3.67e-160 454
Msa0734390 AT2G30020.1 61.443 402 125 7 1 378 1 396 8.38e-158 449
Msa0734390 AT2G40180.1 60.952 315 109 6 76 378 77 389 9.72e-126 367
Msa0734390 AT1G67820.1 46.729 321 143 6 37 332 13 330 3.32e-85 266
Msa0734390 AT1G67820.2 47.284 313 128 7 34 332 5 294 6.44e-85 264
Msa0734390 AT4G08260.1 52.869 244 82 4 136 378 1 212 3.07e-78 240
Msa0734390 AT3G27140.1 49.378 241 69 3 136 375 1 189 1.16e-65 209
Msa0734390 AT2G05050.1 44.672 244 83 4 136 378 1 193 2.46e-58 188
Msa0734390 AT4G31750.1 40.392 255 139 4 124 374 34 279 1.30e-55 185
Msa0734390 AT4G31750.3 40.392 255 139 4 124 374 34 279 1.30e-55 185
Msa0734390 AT4G31750.2 40.392 255 139 4 124 374 34 279 1.37e-55 185
Msa0734390 AT5G10740.1 40.000 255 140 4 124 374 34 279 3.89e-55 185
Msa0734390 AT5G10740.2 40.000 255 140 4 124 374 34 279 3.89e-55 185
Msa0734390 AT5G53140.1 39.608 255 140 6 127 376 104 349 9.91e-55 186
Msa0734390 AT5G53140.2 39.608 255 140 6 127 376 104 349 9.91e-55 186
Msa0734390 AT5G24940.1 39.216 255 142 4 124 374 34 279 2.02e-54 186
Msa0734390 AT1G43900.1 38.996 259 138 7 123 375 125 369 9.79e-53 179
Msa0734390 AT3G15260.2 41.633 245 128 7 136 375 55 289 2.42e-44 155
Msa0734390 AT3G15260.1 41.633 245 128 7 136 375 55 289 2.42e-44 155
Msa0734390 AT4G28400.3 36.965 257 146 7 124 374 14 260 2.50e-44 154
Msa0734390 AT4G28400.1 36.965 257 146 7 124 374 36 282 2.64e-44 155
Msa0734390 AT1G78200.5 37.903 248 136 7 136 375 1 238 4.91e-43 150
Msa0734390 AT1G78200.4 37.903 248 136 7 136 375 1 238 4.91e-43 150
Msa0734390 AT1G78200.1 36.742 264 148 8 121 375 30 283 9.25e-43 150
Msa0734390 AT1G78200.3 36.742 264 148 8 121 375 30 283 9.25e-43 150
Msa0734390 AT1G78200.2 36.742 264 148 8 121 375 30 283 9.25e-43 150
Msa0734390 AT2G20630.1 36.327 245 141 6 136 375 45 279 2.55e-42 149
Msa0734390 AT2G20630.2 36.929 241 137 6 136 371 45 275 2.68e-41 147
Msa0734390 AT1G34750.2 38.224 259 142 9 123 375 36 282 3.70e-41 146
Msa0734390 AT1G34750.1 38.224 259 142 9 123 375 36 282 3.70e-41 146
Msa0734390 AT1G34750.3 38.224 259 142 9 123 375 36 282 3.70e-41 146
Msa0734390 AT5G51760.2 34.528 307 145 8 124 376 79 383 2.22e-40 147
Msa0734390 AT5G51760.1 34.528 307 145 8 124 376 109 413 3.79e-40 147
Msa0734390 AT2G25620.1 32.542 295 153 7 105 375 85 357 4.29e-40 146
Msa0734390 AT2G25620.2 32.542 295 153 7 105 375 85 357 4.29e-40 146
Msa0734390 AT2G29380.1 36.585 287 144 10 123 375 79 361 4.92e-40 145
Msa0734390 AT2G33700.1 34.866 261 145 6 129 372 90 342 8.32e-40 145
Msa0734390 AT5G57050.2 33.660 306 143 8 124 375 73 372 2.67e-39 144
Msa0734390 AT5G57050.1 34.314 306 141 9 124 375 113 412 2.91e-39 145
Msa0734390 AT4G26080.1 33.000 300 148 8 123 375 130 423 5.42e-39 144
Msa0734390 AT1G22280.3 34.601 263 152 10 124 375 34 287 9.00e-39 140
Msa0734390 AT1G22280.1 34.749 259 151 10 124 375 34 281 1.45e-37 137
Msa0734390 AT2G40860.1 33.077 260 149 5 131 375 400 649 4.45e-37 142
Msa0734390 AT1G72770.4 34.962 266 128 6 154 375 238 502 4.54e-37 140
Msa0734390 AT1G72770.1 34.962 266 128 6 154 375 238 502 4.54e-37 140
Msa0734390 AT1G72770.3 34.962 266 128 6 154 375 238 502 4.54e-37 140
Msa0734390 AT1G17550.1 35.206 267 127 7 154 375 237 502 5.33e-37 140
Msa0734390 AT1G17550.2 35.206 267 127 7 154 375 237 502 5.33e-37 140
Msa0734390 AT2G40860.4 33.077 260 149 5 131 375 302 551 5.70e-37 141
Msa0734390 AT3G51470.1 31.801 261 152 8 127 372 76 325 1.95e-34 130
Msa0734390 AT3G51470.2 31.418 261 153 7 127 372 32 281 2.19e-34 129
Msa0734390 AT4G28400.2 38.095 210 119 7 124 327 36 240 2.32e-34 127
Msa0734390 AT1G48040.1 33.835 266 144 7 133 372 88 347 3.21e-34 130
Msa0734390 AT2G34740.1 34.274 248 148 8 136 378 101 338 5.41e-34 129
Msa0734390 AT3G11410.1 36.481 233 120 4 131 336 112 343 1.19e-33 129
Msa0734390 AT2G40860.2 32.927 246 140 5 131 361 400 635 2.96e-33 131
Msa0734390 AT1G07430.1 35.169 236 129 5 124 336 121 355 4.49e-33 128
Msa0734390 AT5G59220.1 35.102 245 134 4 124 346 112 353 7.13e-32 124
Msa0734390 AT1G34750.4 39.151 212 116 9 123 328 36 240 1.62e-29 114
Msa0734390 AT2G34740.3 37.000 200 116 7 136 330 97 291 2.26e-29 115
Msa0734390 AT2G34740.2 37.438 203 111 8 136 330 115 309 2.60e-29 116
Msa0734390 AT3G17250.1 28.520 277 161 8 127 372 121 391 5.06e-29 117
Msa0734390 AT3G62260.3 30.802 237 142 5 153 372 26 257 7.65e-29 114
Msa0734390 AT3G62260.1 30.802 237 142 5 153 372 115 346 1.35e-28 115
Msa0734390 AT3G62260.2 30.802 237 142 5 153 372 116 347 1.51e-28 115
Msa0734390 AT4G31860.1 28.527 319 151 10 124 376 24 331 1.61e-28 114
Msa0734390 AT4G31860.3 30.545 275 121 8 124 337 24 289 2.01e-28 113
Msa0734390 AT5G02760.1 31.674 221 111 6 154 335 72 291 2.38e-28 114
Msa0734390 AT3G55050.1 34.375 224 103 7 154 335 84 305 1.28e-27 112
Msa0734390 AT3G55050.2 34.375 224 103 7 154 335 84 305 1.28e-27 112
Msa0734390 AT4G33920.1 30.000 280 135 9 154 374 61 338 7.15e-27 110
Msa0734390 AT2G25070.1 30.403 273 124 7 124 337 24 289 7.28e-27 110
Msa0734390 AT2G25070.2 30.403 273 124 7 124 337 24 289 7.28e-27 110
Msa0734390 AT3G12620.2 32.743 226 102 6 154 334 83 303 8.87e-27 110
Msa0734390 AT3G12620.1 32.743 226 102 6 154 334 83 303 8.87e-27 110
Msa0734390 AT1G18030.1 31.780 236 131 8 130 338 81 313 4.55e-26 107
Msa0734390 AT5G06750.3 32.328 232 108 7 150 335 78 306 5.59e-26 108
Msa0734390 AT5G06750.1 32.328 232 108 7 150 335 78 306 5.59e-26 108
Msa0734390 AT1G18030.2 32.883 222 119 8 130 324 81 299 9.34e-26 105
Msa0734390 AT4G31860.2 30.651 261 111 8 124 323 24 275 2.57e-25 103
Msa0734390 AT4G38520.2 33.632 223 108 8 154 336 81 303 3.77e-25 105
Msa0734390 AT4G38520.1 33.632 223 108 8 154 336 81 303 3.77e-25 105
Msa0734390 AT3G51370.1 30.357 224 114 6 154 336 79 301 1.99e-24 103
Msa0734390 AT3G51370.3 30.357 224 114 6 154 336 79 301 1.99e-24 103
Msa0734390 AT2G40860.3 32.338 201 116 4 131 316 400 595 1.16e-23 103
Msa0734390 AT5G66080.1 31.839 223 112 6 154 336 82 304 1.23e-23 101
Msa0734390 AT4G33920.2 30.579 242 108 8 192 374 15 255 4.76e-23 98.2
Msa0734390 AT4G33920.3 32.227 211 93 6 213 374 16 225 2.14e-22 95.9
Msa0734390 AT1G09160.2 29.707 239 145 9 152 374 66 297 6.81e-22 97.1
Msa0734390 AT1G09160.1 29.707 239 145 9 152 374 66 297 6.81e-22 97.1
Msa0734390 AT1G47380.1 29.796 245 145 10 148 374 58 293 3.09e-21 95.1
Msa0734390 AT4G27800.1 28.522 291 154 10 130 374 66 348 3.77e-21 94.4
Msa0734390 AT3G06270.1 26.087 299 166 11 124 375 53 343 4.80e-21 93.6
Msa0734390 AT5G06750.2 32.461 191 85 5 191 337 36 226 2.69e-20 90.9
Msa0734390 AT3G17090.1 26.354 277 150 9 154 376 84 360 7.31e-20 90.5
Msa0734390 AT3G17090.2 28.251 223 120 7 154 336 84 306 7.39e-20 89.7
Msa0734390 AT5G57050.3 33.831 201 93 7 124 290 113 307 8.10e-20 89.4
Msa0734390 AT3G51370.2 34.194 155 71 3 213 336 62 216 1.33e-19 88.6
Msa0734390 AT1G68410.4 27.197 239 151 8 152 374 71 302 1.81e-19 89.7
Msa0734390 AT1G68410.3 27.197 239 151 8 152 374 71 302 1.81e-19 89.7
Msa0734390 AT1G68410.1 27.197 239 151 8 152 374 71 302 1.81e-19 89.7
Msa0734390 AT1G68410.2 27.197 239 151 8 152 374 71 302 1.81e-19 89.7
Msa0734390 AT5G27930.1 29.836 305 158 15 117 372 55 352 2.77e-19 89.0
Msa0734390 AT5G27930.2 29.836 305 158 15 117 372 55 352 2.77e-19 89.0
Msa0734390 AT5G66080.2 32.961 179 86 5 192 336 22 200 1.57e-18 85.1
Msa0734390 AT3G63320.1 26.198 313 136 10 156 375 71 381 3.72e-18 85.9
Msa0734390 AT3G63340.12 28.685 251 108 9 188 375 204 446 5.93e-18 85.9
Msa0734390 AT3G63340.11 28.685 251 108 9 188 375 204 446 1.02e-17 85.5
Msa0734390 AT2G20050.2 29.278 263 136 12 154 374 143 397 1.08e-17 85.5
Msa0734390 AT3G63340.7 28.685 251 108 9 188 375 204 446 1.10e-17 85.5
Msa0734390 AT3G63340.6 28.685 251 108 9 188 375 204 446 1.12e-17 85.5
Msa0734390 AT3G63340.3 28.685 251 108 9 188 375 204 446 1.12e-17 85.5
Msa0734390 AT3G63340.10 28.685 251 108 9 188 375 204 446 1.12e-17 85.5
Msa0734390 AT3G63340.4 28.685 251 108 9 188 375 204 446 1.12e-17 85.5
Msa0734390 AT3G63340.8 28.685 251 108 9 188 375 204 446 1.13e-17 85.5
Msa0734390 AT3G63340.5 28.685 251 108 9 188 375 204 446 1.13e-17 85.5
Msa0734390 AT3G63340.1 28.685 251 108 9 188 375 204 446 1.13e-17 85.5
Msa0734390 AT2G20050.1 29.278 263 136 12 154 374 143 397 1.16e-17 85.5
Msa0734390 AT3G63320.2 28.163 245 117 8 188 375 56 298 1.29e-17 84.0
Msa0734390 AT3G16800.2 30.000 250 133 10 125 336 64 309 1.38e-17 83.6
Msa0734390 AT3G16800.1 30.000 250 133 10 125 336 64 309 1.38e-17 83.6
Msa0734390 AT3G16800.3 30.000 250 133 10 125 336 64 309 1.38e-17 83.6
Msa0734390 AT5G01700.1 27.645 293 161 11 129 376 4 290 2.70e-17 82.4
Msa0734390 AT1G72770.2 32.727 165 81 3 154 289 238 401 8.00e-17 81.6
Msa0734390 AT1G72770.5 32.727 165 81 3 154 289 238 401 8.00e-17 81.6
Msa0734390 AT5G01700.2 27.609 297 164 11 125 376 49 339 8.02e-17 81.6
Msa0734390 AT3G16800.4 39.007 141 68 6 213 336 75 214 2.06e-16 78.6
Msa0734390 AT3G16800.6 39.007 141 68 6 213 336 75 214 2.06e-16 78.6
Msa0734390 AT5G59220.2 31.915 188 103 4 124 289 112 296 2.34e-16 79.3
Msa0734390 AT3G63340.2 34.899 149 73 6 243 375 339 479 4.12e-15 77.8
Msa0734390 AT3G05640.2 27.491 291 161 14 125 372 64 347 5.94e-15 75.9
Msa0734390 AT3G05640.1 27.491 291 161 14 125 372 64 347 5.94e-15 75.9
Msa0734390 AT3G05640.3 27.491 291 161 14 125 372 64 347 5.94e-15 75.9
Msa0734390 AT1G22280.2 33.553 152 90 8 124 269 34 180 1.06e-13 69.7
Msa0734390 AT3G16560.1 24.281 313 148 10 149 374 170 480 1.77e-13 72.0
Msa0734390 AT3G16560.4 24.281 313 148 10 149 374 170 480 1.77e-13 72.0
Msa0734390 AT3G16560.2 24.281 313 148 10 149 374 170 480 1.77e-13 72.0
Msa0734390 AT3G16560.3 25.746 268 128 8 149 347 170 435 2.31e-13 71.6
Msa0734390 AT5G36250.1 23.793 290 152 9 113 335 57 344 6.76e-12 67.0
Msa0734390 AT5G19280.2 29.412 238 132 10 131 338 318 549 3.14e-11 65.5
Msa0734390 AT1G79630.2 35.252 139 73 5 213 335 152 289 3.70e-11 64.7
Msa0734390 AT1G79630.7 35.252 139 73 5 213 335 152 289 3.70e-11 64.7
Msa0734390 AT1G79630.6 35.252 139 73 5 213 335 112 249 3.78e-11 64.7
Msa0734390 AT1G79630.3 35.252 139 73 5 213 335 112 249 3.78e-11 64.7
Msa0734390 AT1G79630.4 35.252 139 73 5 213 335 112 249 3.78e-11 64.7
Msa0734390 AT1G79630.5 35.252 139 73 5 213 335 112 249 3.78e-11 64.7
Msa0734390 AT1G79630.8 35.507 138 72 5 213 334 218 354 6.09e-11 64.3
Msa0734390 AT1G79630.1 35.507 138 72 5 213 334 222 358 6.58e-11 64.3

Find 97 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATCTGACAGACATTTAT+TGG 0.151921 5_1:+48298810 Msa0734390:three_prime_UTR
TATAGATTATCTAATTATTT+TGG 0.174941 5_1:+48298929 Msa0734390:three_prime_UTR
TATTAGCTTCAGATGGATTA+TGG 0.192944 5_1:+48298294 Msa0734390:CDS
TCTTCGTGGTGAAAATAATT+TGG 0.216756 5_1:+48297175 Msa0734390:CDS
TTTACGTCAAACAAAGATTC+TGG 0.235726 5_1:+48296954 Msa0734390:CDS
GAGAGGGAGGAGGGAGTATA+TGG 0.257999 5_1:+48297127 Msa0734390:CDS
GTCTGTTTCAAGAGGCTCTT+TGG 0.279836 5_1:+48298649 Msa0734390:CDS
CTAGTAAACAAATGGCTAAA+TGG 0.283175 5_1:-48298876 None:intergenic
CTCATTCCAGGTTAGTAATC+AGG 0.298380 5_1:+48298544 Msa0734390:intron
AATTGAAACACTATGTTTAG+AGG 0.303735 5_1:+48298696 Msa0734390:CDS
GACGGAGCAAGACATGTTTA+AGG 0.316038 5_1:-48296733 None:intergenic
TTGATTTATGTCGCGGTGTT+TGG 0.326760 5_1:+48298153 Msa0734390:CDS
AAATAATTTAACGTTGGAAT+TGG 0.339098 5_1:-48296662 None:intergenic
TGCCGCAAATTCAGCGGCTT+TGG 0.344353 5_1:-48297719 None:intergenic
AATATTAACAAGTCATGTTC+AGG 0.369231 5_1:-48298275 None:intergenic
ATTAGCTTCAGATGGATTAT+GGG 0.376455 5_1:+48298295 Msa0734390:CDS
CACTATGTTTAGAGGTTCAT+TGG 0.381019 5_1:+48298704 Msa0734390:exon
GTTGTTGTTCACGATGATTA+AGG 0.382149 5_1:-48296705 None:intergenic
TTCGGTAATCGAAGACAAAA+AGG 0.384570 5_1:-48296918 None:intergenic
TAACAACCAACAACCGTTGA+TGG 0.393883 5_1:+48298604 Msa0734390:CDS
GCTGTGTAACAGCATTCATT+AGG 0.400134 5_1:+48297872 Msa0734390:CDS
CGCGGTGTTTGGAGGATTCA+AGG 0.409122 5_1:+48298164 Msa0734390:CDS
GTTGTTGAGGCGGAGGGAGA+TGG 0.425322 5_1:+48297086 Msa0734390:CDS
TAACTTAGAAAAGAATATCT+TGG 0.427613 5_1:+48297744 Msa0734390:CDS
TGCCAAAGCCGCTGAATTTG+CGG 0.431289 5_1:+48297717 Msa0734390:CDS
ATTCTAACAACTTTAGTCTC+AGG 0.432534 5_1:-48298248 None:intergenic
TTACGTCAAACAAAGATTCT+GGG 0.451101 5_1:+48296955 Msa0734390:CDS
ATTTATGTCGCGGTGTTTGG+AGG 0.459287 5_1:+48298156 Msa0734390:CDS
ATGGAAGATCGTTATACAGC+TGG 0.461700 5_1:+48297146 Msa0734390:CDS
GTCGTTGTTGTTGTTGAAGA+TGG 0.465895 5_1:-48296846 None:intergenic
TAGGCTAATCTCTAATCATC+AGG 0.469978 5_1:-48298750 None:intergenic
TAAATATTCTAGTAAACAAA+TGG 0.472837 5_1:-48298884 None:intergenic
TTTATTGTAAGAGAGGGAGG+AGG 0.476578 5_1:+48297117 Msa0734390:CDS
CTGTTTATTGTAAGAGAGGG+AGG 0.478469 5_1:+48297114 Msa0734390:CDS
TTGTTGAGGCGGAGGGAGAT+GGG 0.484067 5_1:+48297087 Msa0734390:CDS
TTGCAGAAAAGAGATGAAGA+AGG 0.490349 5_1:-48296783 None:intergenic
ACCTTCAAGGGAAGACGAAA+AGG 0.493186 5_1:+48297984 Msa0734390:CDS
GAGGGATGTTGTTGAGGCGG+AGG 0.493467 5_1:+48297079 Msa0734390:CDS
TTATTGTAAGAGAGGGAGGA+GGG 0.495221 5_1:+48297118 Msa0734390:CDS
TTCAGATGGATTATGGGATA+AGG 0.496992 5_1:+48298301 Msa0734390:CDS
CTTGCTGTATCAAGAGGAAT+CGG 0.497083 5_1:+48298191 Msa0734390:CDS
ATATATATACAGAAAAGAAT+AGG 0.498035 5_1:-48298769 None:intergenic
AACTTAGTTGTGTCTAATGC+TGG 0.499105 5_1:+48297901 Msa0734390:CDS
ATCTGATCACCGACCTTCAA+GGG 0.504972 5_1:+48297972 Msa0734390:CDS
CATCTGATCACCGACCTTCA+AGG 0.507130 5_1:+48297971 Msa0734390:CDS
TTTCGTCTTCCCTTGAAGGT+CGG 0.508205 5_1:-48297981 None:intergenic
CGACACCGTCTGCGGTGGCG+AGG 0.516352 5_1:+48297060 Msa0734390:CDS
TACAGGCCATCAACGGTTGT+TGG 0.517697 5_1:-48298610 None:intergenic
ATTCTGTTTATTGTAAGAGA+GGG 0.518939 5_1:+48297111 Msa0734390:CDS
TTGTTAATATTAGCTTCAGA+TGG 0.519141 5_1:+48298287 Msa0734390:CDS
TTTGGCGTATTTGATGGCCA+TGG 0.525971 5_1:+48297691 Msa0734390:CDS
CAGCGGCTTTGGCACCTCCA+TGG 0.527083 5_1:-48297708 None:intergenic
TATTCTGTTTATTGTAAGAG+AGG 0.528687 5_1:+48297110 Msa0734390:CDS
GTGCTGTTATTAGTAGAGGA+GGG 0.529836 5_1:+48297932 Msa0734390:CDS
GCACAATTGTCTGTTTCAAG+AGG 0.531606 5_1:+48298641 Msa0734390:CDS
AGATCGACACTTGAAACAAT+GGG 0.532064 5_1:+48298214 Msa0734390:CDS
AGGGATGTTGTTGAGGCGGA+GGG 0.535503 5_1:+48297080 Msa0734390:CDS
TCGATTACCGAAACTACCCT+TGG 0.539502 5_1:+48296929 Msa0734390:CDS
CAATTTGATTATCATGACAC+TGG 0.543628 5_1:-48298678 None:intergenic
CGTGCTGTTATTAGTAGAGG+AGG 0.544244 5_1:+48297931 Msa0734390:CDS
TGGAAGATCGTTATACAGCT+GGG 0.545761 5_1:+48297147 Msa0734390:CDS
GGTGAAGAAGGTGAAGAACA+AGG 0.546327 5_1:-48296897 None:intergenic
TGAACTCAGAATCGGTATTG+AGG 0.547989 5_1:-48297822 None:intergenic
TGAAGAGGAAACGACCTACC+AGG 0.550346 5_1:+48296997 Msa0734390:CDS
TGCCGTGCTGTTATTAGTAG+AGG 0.550511 5_1:+48297928 Msa0734390:CDS
TGCTGTTATTAGTAGAGGAG+GGG 0.551553 5_1:+48297933 Msa0734390:CDS
ACAGCTGGGGTCAATCTTCG+TGG 0.551952 5_1:+48297161 Msa0734390:CDS
AGAAACAGGTATATTAAGCC+TGG 0.552089 5_1:-48297015 None:intergenic
CGAAGATGATGTTGAGGAGG+CGG 0.553327 5_1:+48297786 Msa0734390:CDS
GACACCGTCTGCGGTGGCGA+GGG 0.554379 5_1:+48297061 Msa0734390:CDS
ACATCCCTCGCCACCGCAGA+CGG 0.561418 5_1:-48297065 None:intergenic
GAGATCGACACTTGAAACAA+TGG 0.569960 5_1:+48298213 Msa0734390:CDS
AAACATGTCTTGCTCCGTCG+CGG 0.570392 5_1:+48296737 Msa0734390:exon
GCCACCGCAGACGGTGTCGC+CGG 0.573609 5_1:-48297056 None:intergenic
CGTCGCGGTTTCGAATTCGC+CGG 0.576069 5_1:+48296752 Msa0734390:CDS
TGAGTCAAATAATTTAACGT+TGG 0.579202 5_1:-48296668 None:intergenic
GGATCTCTTGCTGTATCAAG+AGG 0.589287 5_1:+48298185 Msa0734390:CDS
GTAACAGCATTCATTAGGAA+TGG 0.600306 5_1:+48297877 Msa0734390:CDS
GGTAGAACAGAAGAAGATGA+TGG 0.602328 5_1:+48298725 Msa0734390:three_prime_UTR
GAAGGTGAAGAACAAGGAGA+AGG 0.604617 5_1:-48296891 None:intergenic
ACAGGTATATTAAGCCTGGT+AGG 0.605164 5_1:-48297011 None:intergenic
GAGCGACGAAGATGATGTTG+AGG 0.609121 5_1:+48297780 Msa0734390:CDS
GGCGAGGGATGTTGTTGAGG+CGG 0.612440 5_1:+48297076 Msa0734390:CDS
TCCGGCGACACCGTCTGCGG+TGG 0.616313 5_1:+48297055 Msa0734390:CDS
GTTATTTGCCGCAAATTCAG+CGG 0.620742 5_1:-48297725 None:intergenic
CGACGAAGATGATGTTGAGG+AGG 0.621342 5_1:+48297783 Msa0734390:CDS
TGTTCCGGCGACACCGTCTG+CGG 0.623253 5_1:+48297052 Msa0734390:CDS
GGTGGCGAGGGATGTTGTTG+AGG 0.629842 5_1:+48297073 Msa0734390:CDS
TAGTAGAGGAGGGGTTGCTG+AGG 0.630412 5_1:+48297942 Msa0734390:CDS
CGGCGAATTCGAAACCGCGA+CGG 0.641319 5_1:-48296751 None:intergenic
CTCCTCTACTAATAACAGCA+CGG 0.646708 5_1:-48297930 None:intergenic
GGTTATGTTGATTTATGTCG+CGG 0.653499 5_1:+48298146 Msa0734390:CDS
GATGAAGAAGGTGAAAACAC+CGG 0.659578 5_1:-48296771 None:intergenic
AAAGGACAGAATCGAGACCC+TGG 0.666426 5_1:+48298002 Msa0734390:CDS
GGAAGATCGTTATACAGCTG+GGG 0.680165 5_1:+48297148 Msa0734390:CDS
GGCGTATTTGATGGCCATGG+AGG 0.699437 5_1:+48297694 Msa0734390:CDS
GTTGAGGAGGCGGTGAAACG+TGG 0.709755 5_1:+48297796 Msa0734390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTTAATATTGAG+TGG + chr5_1:48297219-48297238 Msa0734390:intron 10.0%
!!! TTCAATATTTGTTATTTTTT+TGG + chr5_1:48297345-48297364 Msa0734390:intron 10.0%
!!! TATAGATTATCTAATTATTT+TGG + chr5_1:48298929-48298948 Msa0734390:three_prime_UTR 10.0%
!!! TATTTTTTTTTAATATTGAG+TGG + chr5_1:48297219-48297238 Msa0734390:intron 10.0%
!!! TTCAATATTTGTTATTTTTT+TGG + chr5_1:48297345-48297364 Msa0734390:intron 10.0%
!!! TATAGATTATCTAATTATTT+TGG + chr5_1:48298929-48298948 Msa0734390:three_prime_UTR 10.0%
!! ATATATATACAGAAAAGAAT+AGG - chr5_1:48298772-48298791 None:intergenic 15.0%
!! TAAATATTCTAGTAAACAAA+TGG - chr5_1:48298887-48298906 None:intergenic 15.0%
!! ATATATATACAGAAAAGAAT+AGG - chr5_1:48298772-48298791 None:intergenic 15.0%
!! TAAATATTCTAGTAAACAAA+TGG - chr5_1:48298887-48298906 None:intergenic 15.0%
!! AAATAATTTAACGTTGGAAT+TGG - chr5_1:48296665-48296684 None:intergenic 20.0%
!!! TTTTTTTAATATTGAGTGGT+TGG + chr5_1:48297223-48297242 Msa0734390:intron 20.0%
!!! TTGATATGTTTTTGTCAATT+GGG + chr5_1:48297254-48297273 Msa0734390:intron 20.0%
!! ACTTGATTTCTTAATTGATT+TGG + chr5_1:48297294-48297313 Msa0734390:intron 20.0%
!! CACAATTCAAATTTAACTAA+TGG - chr5_1:48297504-48297523 None:intergenic 20.0%
!! TAACTTAGAAAAGAATATCT+TGG + chr5_1:48297744-48297763 Msa0734390:CDS 20.0%
!!! TTTATGTTTTTTTGAAACCT+TGG + chr5_1:48298064-48298083 Msa0734390:intron 20.0%
!!! ATTCATTCATTCTTTTATAC+TGG + chr5_1:48298961-48298980 Msa0734390:three_prime_UTR 20.0%
!! AAATAATTTAACGTTGGAAT+TGG - chr5_1:48296665-48296684 None:intergenic 20.0%
!!! TTTTTTTAATATTGAGTGGT+TGG + chr5_1:48297223-48297242 Msa0734390:intron 20.0%
!!! TTGATATGTTTTTGTCAATT+GGG + chr5_1:48297254-48297273 Msa0734390:intron 20.0%
!! ACTTGATTTCTTAATTGATT+TGG + chr5_1:48297294-48297313 Msa0734390:intron 20.0%
!! CACAATTCAAATTTAACTAA+TGG - chr5_1:48297504-48297523 None:intergenic 20.0%
!! TAACTTAGAAAAGAATATCT+TGG + chr5_1:48297744-48297763 Msa0734390:CDS 20.0%
!!! TTTATGTTTTTTTGAAACCT+TGG + chr5_1:48298064-48298083 Msa0734390:intron 20.0%
! TGAGTCAAATAATTTAACGT+TGG - chr5_1:48296671-48296690 None:intergenic 25.0%
! TATTCTGTTTATTGTAAGAG+AGG + chr5_1:48297110-48297129 Msa0734390:CDS 25.0%
! ATTCTGTTTATTGTAAGAGA+GGG + chr5_1:48297111-48297130 Msa0734390:CDS 25.0%
!!! GTTGATATGTTTTTGTCAAT+TGG + chr5_1:48297253-48297272 Msa0734390:intron 25.0%
!!! CTTAATTGATTTGGTCTTAT+TGG + chr5_1:48297303-48297322 Msa0734390:intron 25.0%
!!! GTTATTTTTTTGGTCTGATT+TGG + chr5_1:48297355-48297374 Msa0734390:intron 25.0%
!!! GTTTATTTTGTGATAATTGC+AGG + chr5_1:48297663-48297682 Msa0734390:intron 25.0%
!!! TTTTTTCATGAACTCAGAAT+CGG - chr5_1:48297833-48297852 None:intergenic 25.0%
! TTCATGAAAAAAGATCTACA+TGG + chr5_1:48297841-48297860 Msa0734390:CDS 25.0%
! AATATTAACAAGTCATGTTC+AGG - chr5_1:48298278-48298297 None:intergenic 25.0%
!! TTGTTAATATTAGCTTCAGA+TGG + chr5_1:48298287-48298306 Msa0734390:CDS 25.0%
! GTTAATCATTCGATATCAAA+AGG - chr5_1:48298507-48298526 None:intergenic 25.0%
! AATTGAAACACTATGTTTAG+AGG + chr5_1:48298696-48298715 Msa0734390:CDS 25.0%
! TTTATCTGACAGACATTTAT+TGG + chr5_1:48298810-48298829 Msa0734390:three_prime_UTR 25.0%
! TGAGTCAAATAATTTAACGT+TGG - chr5_1:48296671-48296690 None:intergenic 25.0%
! TATTCTGTTTATTGTAAGAG+AGG + chr5_1:48297110-48297129 Msa0734390:CDS 25.0%
! ATTCTGTTTATTGTAAGAGA+GGG + chr5_1:48297111-48297130 Msa0734390:CDS 25.0%
!!! GTTGATATGTTTTTGTCAAT+TGG + chr5_1:48297253-48297272 Msa0734390:intron 25.0%
!!! CTTAATTGATTTGGTCTTAT+TGG + chr5_1:48297303-48297322 Msa0734390:intron 25.0%
!!! GTTATTTTTTTGGTCTGATT+TGG + chr5_1:48297355-48297374 Msa0734390:intron 25.0%
!!! GTTTATTTTGTGATAATTGC+AGG + chr5_1:48297663-48297682 Msa0734390:intron 25.0%
!!! TTTTTTCATGAACTCAGAAT+CGG - chr5_1:48297833-48297852 None:intergenic 25.0%
! TTCATGAAAAAAGATCTACA+TGG + chr5_1:48297841-48297860 Msa0734390:CDS 25.0%
! AATATTAACAAGTCATGTTC+AGG - chr5_1:48298278-48298297 None:intergenic 25.0%
!! TTGTTAATATTAGCTTCAGA+TGG + chr5_1:48298287-48298306 Msa0734390:CDS 25.0%
! GTTAATCATTCGATATCAAA+AGG - chr5_1:48298507-48298526 None:intergenic 25.0%
! AATTGAAACACTATGTTTAG+AGG + chr5_1:48298696-48298715 Msa0734390:CDS 25.0%
! TTTATCTGACAGACATTTAT+TGG + chr5_1:48298810-48298829 Msa0734390:three_prime_UTR 25.0%
TTGTTTGACGTAAAAACCAA+GGG - chr5_1:48296948-48296967 None:intergenic 30.0%
TTTGTTTGACGTAAAAACCA+AGG - chr5_1:48296949-48296968 None:intergenic 30.0%
TTTACGTCAAACAAAGATTC+TGG + chr5_1:48296954-48296973 Msa0734390:CDS 30.0%
TTACGTCAAACAAAGATTCT+GGG + chr5_1:48296955-48296974 Msa0734390:CDS 30.0%
TCTTCGTGGTGAAAATAATT+TGG + chr5_1:48297175-48297194 Msa0734390:CDS 30.0%
TGAAGTTAAAAAGTCTGTCT+TGG + chr5_1:48297471-48297490 Msa0734390:intron 30.0%
GTAGATAGTTGAAGCAAATT+AGG + chr5_1:48297523-48297542 Msa0734390:intron 30.0%
! GTGTAAAATCTAACTTGTAC+AGG + chr5_1:48297641-48297660 Msa0734390:intron 30.0%
ATGAAAAAAGATCTACATGG+TGG + chr5_1:48297844-48297863 Msa0734390:CDS 30.0%
AATGGTAAGGAAATTTACCA+GGG - chr5_1:48298022-48298041 None:intergenic 30.0%
AAATGGTAAGGAAATTTACC+AGG - chr5_1:48298023-48298042 None:intergenic 30.0%
AACTCAATACACAAATGGTA+AGG - chr5_1:48298035-48298054 None:intergenic 30.0%
AAGAGAACTCAATACACAAA+TGG - chr5_1:48298040-48298059 None:intergenic 30.0%
ATTCTAACAACTTTAGTCTC+AGG - chr5_1:48298251-48298270 None:intergenic 30.0%
!! TATTAGCTTCAGATGGATTA+TGG + chr5_1:48298294-48298313 Msa0734390:CDS 30.0%
!! ATTAGCTTCAGATGGATTAT+GGG + chr5_1:48298295-48298314 Msa0734390:CDS 30.0%
GACTAACCTTTATGTGTATT+CGG + chr5_1:48298346-48298365 Msa0734390:intron 30.0%
! AAGTTTCTTTTTCTCATTCC+AGG + chr5_1:48298532-48298551 Msa0734390:intron 30.0%
CAATTTGATTATCATGACAC+TGG - chr5_1:48298681-48298700 None:intergenic 30.0%
CTAGTAAACAAATGGCTAAA+TGG - chr5_1:48298879-48298898 None:intergenic 30.0%
TTGTTTGACGTAAAAACCAA+GGG - chr5_1:48296948-48296967 None:intergenic 30.0%
TTTGTTTGACGTAAAAACCA+AGG - chr5_1:48296949-48296968 None:intergenic 30.0%
TTTACGTCAAACAAAGATTC+TGG + chr5_1:48296954-48296973 Msa0734390:CDS 30.0%
TTACGTCAAACAAAGATTCT+GGG + chr5_1:48296955-48296974 Msa0734390:CDS 30.0%
TCTTCGTGGTGAAAATAATT+TGG + chr5_1:48297175-48297194 Msa0734390:CDS 30.0%
TGAAGTTAAAAAGTCTGTCT+TGG + chr5_1:48297471-48297490 Msa0734390:intron 30.0%
GTAGATAGTTGAAGCAAATT+AGG + chr5_1:48297523-48297542 Msa0734390:intron 30.0%
! GTGTAAAATCTAACTTGTAC+AGG + chr5_1:48297641-48297660 Msa0734390:intron 30.0%
ATGAAAAAAGATCTACATGG+TGG + chr5_1:48297844-48297863 Msa0734390:CDS 30.0%
AATGGTAAGGAAATTTACCA+GGG - chr5_1:48298022-48298041 None:intergenic 30.0%
AAATGGTAAGGAAATTTACC+AGG - chr5_1:48298023-48298042 None:intergenic 30.0%
AACTCAATACACAAATGGTA+AGG - chr5_1:48298035-48298054 None:intergenic 30.0%
AAGAGAACTCAATACACAAA+TGG - chr5_1:48298040-48298059 None:intergenic 30.0%
ATTCTAACAACTTTAGTCTC+AGG - chr5_1:48298251-48298270 None:intergenic 30.0%
!! TATTAGCTTCAGATGGATTA+TGG + chr5_1:48298294-48298313 Msa0734390:CDS 30.0%
!! ATTAGCTTCAGATGGATTAT+GGG + chr5_1:48298295-48298314 Msa0734390:CDS 30.0%
GACTAACCTTTATGTGTATT+CGG + chr5_1:48298346-48298365 Msa0734390:intron 30.0%
! AAGTTTCTTTTTCTCATTCC+AGG + chr5_1:48298532-48298551 Msa0734390:intron 30.0%
CAATTTGATTATCATGACAC+TGG - chr5_1:48298681-48298700 None:intergenic 30.0%
CTAGTAAACAAATGGCTAAA+TGG - chr5_1:48298879-48298898 None:intergenic 30.0%
! GTTGTTGTTCACGATGATTA+AGG - chr5_1:48296708-48296727 None:intergenic 35.0%
TTGCAGAAAAGAGATGAAGA+AGG - chr5_1:48296786-48296805 None:intergenic 35.0%
TTCGGTAATCGAAGACAAAA+AGG - chr5_1:48296921-48296940 None:intergenic 35.0%
GTAAAAACCAAGGGTAGTTT+CGG - chr5_1:48296939-48296958 None:intergenic 35.0%
!!! AGAATGATGCTGTTTTGAAG+AGG + chr5_1:48296982-48297001 Msa0734390:CDS 35.0%
AGAAACAGGTATATTAAGCC+TGG - chr5_1:48297018-48297037 None:intergenic 35.0%
! CAAAAAGCATGTTCAGAAAC+AGG - chr5_1:48297032-48297051 None:intergenic 35.0%
!! TGAACATGCTTTTTGTGTTC+CGG + chr5_1:48297037-48297056 Msa0734390:CDS 35.0%
!! TGTTGTTGTTGATGATGACT+TGG + chr5_1:48297599-48297618 Msa0734390:intron 35.0%
!!! TGATAATTGCAGGCCTTTTT+TGG + chr5_1:48297673-48297692 Msa0734390:intron 35.0%
GTAACAGCATTCATTAGGAA+TGG + chr5_1:48297877-48297896 Msa0734390:CDS 35.0%
AACTTAGTTGTGTCTAATGC+TGG + chr5_1:48297901-48297920 Msa0734390:CDS 35.0%
TGCATTGAAATTTGTCTTGC+AGG + chr5_1:48298121-48298140 Msa0734390:intron 35.0%
GCATTGAAATTTGTCTTGCA+GGG + chr5_1:48298122-48298141 Msa0734390:intron 35.0%
!! GGTTATGTTGATTTATGTCG+CGG + chr5_1:48298146-48298165 Msa0734390:CDS 35.0%
AGATCGACACTTGAAACAAT+GGG + chr5_1:48298214-48298233 Msa0734390:CDS 35.0%
!! TTCAGATGGATTATGGGATA+AGG + chr5_1:48298301-48298320 Msa0734390:CDS 35.0%
ACATGATTTGAGTGTGTGTT+TGG - chr5_1:48298429-48298448 None:intergenic 35.0%
! CAATTGTGCAAGCTTTTTAC+AGG - chr5_1:48298630-48298649 None:intergenic 35.0%
CACTATGTTTAGAGGTTCAT+TGG + chr5_1:48298704-48298723 Msa0734390:exon 35.0%
TAGGCTAATCTCTAATCATC+AGG - chr5_1:48298753-48298772 None:intergenic 35.0%
! TGAATTTTTGTACCCGTAGA+TGG + chr5_1:48298833-48298852 Msa0734390:three_prime_UTR 35.0%
! GAATTTTTGTACCCGTAGAT+GGG + chr5_1:48298834-48298853 Msa0734390:three_prime_UTR 35.0%
! AATTTTTGTACCCGTAGATG+GGG + chr5_1:48298835-48298854 Msa0734390:three_prime_UTR 35.0%
! GTTGTTGTTCACGATGATTA+AGG - chr5_1:48296708-48296727 None:intergenic 35.0%
TTGCAGAAAAGAGATGAAGA+AGG - chr5_1:48296786-48296805 None:intergenic 35.0%
TTCGGTAATCGAAGACAAAA+AGG - chr5_1:48296921-48296940 None:intergenic 35.0%
GTAAAAACCAAGGGTAGTTT+CGG - chr5_1:48296939-48296958 None:intergenic 35.0%
!!! AGAATGATGCTGTTTTGAAG+AGG + chr5_1:48296982-48297001 Msa0734390:CDS 35.0%
AGAAACAGGTATATTAAGCC+TGG - chr5_1:48297018-48297037 None:intergenic 35.0%
! CAAAAAGCATGTTCAGAAAC+AGG - chr5_1:48297032-48297051 None:intergenic 35.0%
!! TGAACATGCTTTTTGTGTTC+CGG + chr5_1:48297037-48297056 Msa0734390:CDS 35.0%
!! TGTTGTTGTTGATGATGACT+TGG + chr5_1:48297599-48297618 Msa0734390:intron 35.0%
!!! TGATAATTGCAGGCCTTTTT+TGG + chr5_1:48297673-48297692 Msa0734390:intron 35.0%
GTAACAGCATTCATTAGGAA+TGG + chr5_1:48297877-48297896 Msa0734390:CDS 35.0%
AACTTAGTTGTGTCTAATGC+TGG + chr5_1:48297901-48297920 Msa0734390:CDS 35.0%
TGCATTGAAATTTGTCTTGC+AGG + chr5_1:48298121-48298140 Msa0734390:intron 35.0%
GCATTGAAATTTGTCTTGCA+GGG + chr5_1:48298122-48298141 Msa0734390:intron 35.0%
!! GGTTATGTTGATTTATGTCG+CGG + chr5_1:48298146-48298165 Msa0734390:CDS 35.0%
AGATCGACACTTGAAACAAT+GGG + chr5_1:48298214-48298233 Msa0734390:CDS 35.0%
!! TTCAGATGGATTATGGGATA+AGG + chr5_1:48298301-48298320 Msa0734390:CDS 35.0%
ACATGATTTGAGTGTGTGTT+TGG - chr5_1:48298429-48298448 None:intergenic 35.0%
! CAATTGTGCAAGCTTTTTAC+AGG - chr5_1:48298630-48298649 None:intergenic 35.0%
CACTATGTTTAGAGGTTCAT+TGG + chr5_1:48298704-48298723 Msa0734390:exon 35.0%
TAGGCTAATCTCTAATCATC+AGG - chr5_1:48298753-48298772 None:intergenic 35.0%
! TGAATTTTTGTACCCGTAGA+TGG + chr5_1:48298833-48298852 Msa0734390:three_prime_UTR 35.0%
! GAATTTTTGTACCCGTAGAT+GGG + chr5_1:48298834-48298853 Msa0734390:three_prime_UTR 35.0%
! AATTTTTGTACCCGTAGATG+GGG + chr5_1:48298835-48298854 Msa0734390:three_prime_UTR 35.0%
GATGAAGAAGGTGAAAACAC+CGG - chr5_1:48296774-48296793 None:intergenic 40.0%
! GTCGTTGTTGTTGTTGAAGA+TGG - chr5_1:48296849-48296868 None:intergenic 40.0%
CGAAGACAAAAAGGTGAAGA+AGG - chr5_1:48296912-48296931 None:intergenic 40.0%
ACAGGTATATTAAGCCTGGT+AGG - chr5_1:48297014-48297033 None:intergenic 40.0%
CTGTTTATTGTAAGAGAGGG+AGG + chr5_1:48297114-48297133 Msa0734390:CDS 40.0%
TTTATTGTAAGAGAGGGAGG+AGG + chr5_1:48297117-48297136 Msa0734390:CDS 40.0%
TTATTGTAAGAGAGGGAGGA+GGG + chr5_1:48297118-48297137 Msa0734390:CDS 40.0%
ATGGAAGATCGTTATACAGC+TGG + chr5_1:48297146-48297165 Msa0734390:CDS 40.0%
TGGAAGATCGTTATACAGCT+GGG + chr5_1:48297147-48297166 Msa0734390:CDS 40.0%
!! TCTGATTTGGTAGCTGCATA+TGG + chr5_1:48297368-48297387 Msa0734390:intron 40.0%
!!! GCCTTTTTTGGCGTATTTGA+TGG + chr5_1:48297685-48297704 Msa0734390:CDS 40.0%
GCCATCAAATACGCCAAAAA+AGG - chr5_1:48297689-48297708 None:intergenic 40.0%
GTTATTTGCCGCAAATTCAG+CGG - chr5_1:48297728-48297747 None:intergenic 40.0%
TGAACTCAGAATCGGTATTG+AGG - chr5_1:48297825-48297844 None:intergenic 40.0%
GCTGTGTAACAGCATTCATT+AGG + chr5_1:48297872-48297891 Msa0734390:CDS 40.0%
CTCCTCTACTAATAACAGCA+CGG - chr5_1:48297933-48297952 None:intergenic 40.0%
! GTGCTGTTATTAGTAGAGGA+GGG + chr5_1:48297932-48297951 Msa0734390:CDS 40.0%
TGCTGTTATTAGTAGAGGAG+GGG + chr5_1:48297933-48297952 Msa0734390:CDS 40.0%
!! GAAACCTTGGTGTTTGAGTT+TGG + chr5_1:48298077-48298096 Msa0734390:intron 40.0%
AGAACCAAACTCAAACACCA+AGG - chr5_1:48298084-48298103 None:intergenic 40.0%
!! GTGTTTGAGTTTGGTTCTGT+TGG + chr5_1:48298086-48298105 Msa0734390:intron 40.0%
TTGAAATTTGTCTTGCAGGG+TGG + chr5_1:48298125-48298144 Msa0734390:intron 40.0%
TTGATTTATGTCGCGGTGTT+TGG + chr5_1:48298153-48298172 Msa0734390:CDS 40.0%
! CTTGCTGTATCAAGAGGAAT+CGG + chr5_1:48298191-48298210 Msa0734390:CDS 40.0%
GAGATCGACACTTGAAACAA+TGG + chr5_1:48298213-48298232 Msa0734390:CDS 40.0%
CAAACGCCGAATACACATAA+AGG - chr5_1:48298355-48298374 None:intergenic 40.0%
! GGAAAGCGTGTTTAGTTACA+CGG - chr5_1:48298486-48298505 None:intergenic 40.0%
CTCATTCCAGGTTAGTAATC+AGG + chr5_1:48298544-48298563 Msa0734390:intron 40.0%
! ATTGCTCGTCAATTTTGCGT+AGG + chr5_1:48298578-48298597 Msa0734390:CDS 40.0%
TAACAACCAACAACCGTTGA+TGG + chr5_1:48298604-48298623 Msa0734390:CDS 40.0%
! AGCTTTTTACAGGCCATCAA+CGG - chr5_1:48298620-48298639 None:intergenic 40.0%
GCACAATTGTCTGTTTCAAG+AGG + chr5_1:48298641-48298660 Msa0734390:CDS 40.0%
GGTAGAACAGAAGAAGATGA+TGG + chr5_1:48298725-48298744 Msa0734390:three_prime_UTR 40.0%
! ATTTTTGTACCCGTAGATGG+GGG + chr5_1:48298836-48298855 Msa0734390:three_prime_UTR 40.0%
GATGAAGAAGGTGAAAACAC+CGG - chr5_1:48296774-48296793 None:intergenic 40.0%
! GTCGTTGTTGTTGTTGAAGA+TGG - chr5_1:48296849-48296868 None:intergenic 40.0%
CGAAGACAAAAAGGTGAAGA+AGG - chr5_1:48296912-48296931 None:intergenic 40.0%
ACAGGTATATTAAGCCTGGT+AGG - chr5_1:48297014-48297033 None:intergenic 40.0%
CTGTTTATTGTAAGAGAGGG+AGG + chr5_1:48297114-48297133 Msa0734390:CDS 40.0%
TTTATTGTAAGAGAGGGAGG+AGG + chr5_1:48297117-48297136 Msa0734390:CDS 40.0%
TTATTGTAAGAGAGGGAGGA+GGG + chr5_1:48297118-48297137 Msa0734390:CDS 40.0%
ATGGAAGATCGTTATACAGC+TGG + chr5_1:48297146-48297165 Msa0734390:CDS 40.0%
TGGAAGATCGTTATACAGCT+GGG + chr5_1:48297147-48297166 Msa0734390:CDS 40.0%
!! TCTGATTTGGTAGCTGCATA+TGG + chr5_1:48297368-48297387 Msa0734390:intron 40.0%
!!! GCCTTTTTTGGCGTATTTGA+TGG + chr5_1:48297685-48297704 Msa0734390:CDS 40.0%
GCCATCAAATACGCCAAAAA+AGG - chr5_1:48297689-48297708 None:intergenic 40.0%
GTTATTTGCCGCAAATTCAG+CGG - chr5_1:48297728-48297747 None:intergenic 40.0%
TGAACTCAGAATCGGTATTG+AGG - chr5_1:48297825-48297844 None:intergenic 40.0%
GCTGTGTAACAGCATTCATT+AGG + chr5_1:48297872-48297891 Msa0734390:CDS 40.0%
CTCCTCTACTAATAACAGCA+CGG - chr5_1:48297933-48297952 None:intergenic 40.0%
! GTGCTGTTATTAGTAGAGGA+GGG + chr5_1:48297932-48297951 Msa0734390:CDS 40.0%
TGCTGTTATTAGTAGAGGAG+GGG + chr5_1:48297933-48297952 Msa0734390:CDS 40.0%
!! GAAACCTTGGTGTTTGAGTT+TGG + chr5_1:48298077-48298096 Msa0734390:intron 40.0%
AGAACCAAACTCAAACACCA+AGG - chr5_1:48298084-48298103 None:intergenic 40.0%
!! GTGTTTGAGTTTGGTTCTGT+TGG + chr5_1:48298086-48298105 Msa0734390:intron 40.0%
TTGAAATTTGTCTTGCAGGG+TGG + chr5_1:48298125-48298144 Msa0734390:intron 40.0%
TTGATTTATGTCGCGGTGTT+TGG + chr5_1:48298153-48298172 Msa0734390:CDS 40.0%
! CTTGCTGTATCAAGAGGAAT+CGG + chr5_1:48298191-48298210 Msa0734390:CDS 40.0%
GAGATCGACACTTGAAACAA+TGG + chr5_1:48298213-48298232 Msa0734390:CDS 40.0%
CAAACGCCGAATACACATAA+AGG - chr5_1:48298355-48298374 None:intergenic 40.0%
! GGAAAGCGTGTTTAGTTACA+CGG - chr5_1:48298486-48298505 None:intergenic 40.0%
CTCATTCCAGGTTAGTAATC+AGG + chr5_1:48298544-48298563 Msa0734390:intron 40.0%
! ATTGCTCGTCAATTTTGCGT+AGG + chr5_1:48298578-48298597 Msa0734390:CDS 40.0%
TAACAACCAACAACCGTTGA+TGG + chr5_1:48298604-48298623 Msa0734390:CDS 40.0%
! AGCTTTTTACAGGCCATCAA+CGG - chr5_1:48298620-48298639 None:intergenic 40.0%
GCACAATTGTCTGTTTCAAG+AGG + chr5_1:48298641-48298660 Msa0734390:CDS 40.0%
GGTAGAACAGAAGAAGATGA+TGG + chr5_1:48298725-48298744 Msa0734390:three_prime_UTR 40.0%
! ATTTTTGTACCCGTAGATGG+GGG + chr5_1:48298836-48298855 Msa0734390:three_prime_UTR 40.0%
GACGGAGCAAGACATGTTTA+AGG - chr5_1:48296736-48296755 None:intergenic 45.0%
GAAGGTGAAGAACAAGGAGA+AGG - chr5_1:48296894-48296913 None:intergenic 45.0%
GGTGAAGAAGGTGAAGAACA+AGG - chr5_1:48296900-48296919 None:intergenic 45.0%
TCGATTACCGAAACTACCCT+TGG + chr5_1:48296929-48296948 Msa0734390:CDS 45.0%
GGAAGATCGTTATACAGCTG+GGG + chr5_1:48297148-48297167 Msa0734390:CDS 45.0%
! TTTGGCGTATTTGATGGCCA+TGG + chr5_1:48297691-48297710 Msa0734390:CDS 45.0%
! TGCCGTGCTGTTATTAGTAG+AGG + chr5_1:48297928-48297947 Msa0734390:CDS 45.0%
! CGTGCTGTTATTAGTAGAGG+AGG + chr5_1:48297931-48297950 Msa0734390:CDS 45.0%
ATCTGATCACCGACCTTCAA+GGG + chr5_1:48297972-48297991 Msa0734390:CDS 45.0%
TTTCGTCTTCCCTTGAAGGT+CGG - chr5_1:48297984-48298003 None:intergenic 45.0%
ACCTTCAAGGGAAGACGAAA+AGG + chr5_1:48297984-48298003 Msa0734390:CDS 45.0%
! TCCTTTTCGTCTTCCCTTGA+AGG - chr5_1:48297988-48298007 None:intergenic 45.0%
ATTTATGTCGCGGTGTTTGG+AGG + chr5_1:48298156-48298175 Msa0734390:CDS 45.0%
! GGATCTCTTGCTGTATCAAG+AGG + chr5_1:48298185-48298204 Msa0734390:CDS 45.0%
CTGCTTCCTGATTACTAACC+TGG - chr5_1:48298553-48298572 None:intergenic 45.0%
GTCTGTTTCAAGAGGCTCTT+TGG + chr5_1:48298649-48298668 Msa0734390:CDS 45.0%
AATCTCTACTCCCCCATCTA+CGG - chr5_1:48298849-48298868 None:intergenic 45.0%
GACGGAGCAAGACATGTTTA+AGG - chr5_1:48296736-48296755 None:intergenic 45.0%
GAAGGTGAAGAACAAGGAGA+AGG - chr5_1:48296894-48296913 None:intergenic 45.0%
GGTGAAGAAGGTGAAGAACA+AGG - chr5_1:48296900-48296919 None:intergenic 45.0%
TCGATTACCGAAACTACCCT+TGG + chr5_1:48296929-48296948 Msa0734390:CDS 45.0%
GGAAGATCGTTATACAGCTG+GGG + chr5_1:48297148-48297167 Msa0734390:CDS 45.0%
! TTTGGCGTATTTGATGGCCA+TGG + chr5_1:48297691-48297710 Msa0734390:CDS 45.0%
! TGCCGTGCTGTTATTAGTAG+AGG + chr5_1:48297928-48297947 Msa0734390:CDS 45.0%
! CGTGCTGTTATTAGTAGAGG+AGG + chr5_1:48297931-48297950 Msa0734390:CDS 45.0%
ATCTGATCACCGACCTTCAA+GGG + chr5_1:48297972-48297991 Msa0734390:CDS 45.0%
TTTCGTCTTCCCTTGAAGGT+CGG - chr5_1:48297984-48298003 None:intergenic 45.0%
ACCTTCAAGGGAAGACGAAA+AGG + chr5_1:48297984-48298003 Msa0734390:CDS 45.0%
! TCCTTTTCGTCTTCCCTTGA+AGG - chr5_1:48297988-48298007 None:intergenic 45.0%
ATTTATGTCGCGGTGTTTGG+AGG + chr5_1:48298156-48298175 Msa0734390:CDS 45.0%
! GGATCTCTTGCTGTATCAAG+AGG + chr5_1:48298185-48298204 Msa0734390:CDS 45.0%
CTGCTTCCTGATTACTAACC+TGG - chr5_1:48298553-48298572 None:intergenic 45.0%
GTCTGTTTCAAGAGGCTCTT+TGG + chr5_1:48298649-48298668 Msa0734390:CDS 45.0%
AATCTCTACTCCCCCATCTA+CGG - chr5_1:48298849-48298868 None:intergenic 45.0%
AAACATGTCTTGCTCCGTCG+CGG + chr5_1:48296737-48296756 Msa0734390:exon 50.0%
TGAAGAGGAAACGACCTACC+AGG + chr5_1:48296997-48297016 Msa0734390:CDS 50.0%
TGCCAAAGCCGCTGAATTTG+CGG + chr5_1:48297717-48297736 Msa0734390:CDS 50.0%
GAGCGACGAAGATGATGTTG+AGG + chr5_1:48297780-48297799 Msa0734390:CDS 50.0%
CGACGAAGATGATGTTGAGG+AGG + chr5_1:48297783-48297802 Msa0734390:CDS 50.0%
CGAAGATGATGTTGAGGAGG+CGG + chr5_1:48297786-48297805 Msa0734390:CDS 50.0%
CATCTGATCACCGACCTTCA+AGG + chr5_1:48297971-48297990 Msa0734390:CDS 50.0%
AAAGGACAGAATCGAGACCC+TGG + chr5_1:48298002-48298021 Msa0734390:CDS 50.0%
TACAGGCCATCAACGGTTGT+TGG - chr5_1:48298613-48298632 None:intergenic 50.0%
ATCTCTACTCCCCCATCTAC+GGG - chr5_1:48298848-48298867 None:intergenic 50.0%
AAACATGTCTTGCTCCGTCG+CGG + chr5_1:48296737-48296756 Msa0734390:exon 50.0%
TGAAGAGGAAACGACCTACC+AGG + chr5_1:48296997-48297016 Msa0734390:CDS 50.0%
TGCCAAAGCCGCTGAATTTG+CGG + chr5_1:48297717-48297736 Msa0734390:CDS 50.0%
GAGCGACGAAGATGATGTTG+AGG + chr5_1:48297780-48297799 Msa0734390:CDS 50.0%
CGACGAAGATGATGTTGAGG+AGG + chr5_1:48297783-48297802 Msa0734390:CDS 50.0%
CGAAGATGATGTTGAGGAGG+CGG + chr5_1:48297786-48297805 Msa0734390:CDS 50.0%
CATCTGATCACCGACCTTCA+AGG + chr5_1:48297971-48297990 Msa0734390:CDS 50.0%
AAAGGACAGAATCGAGACCC+TGG + chr5_1:48298002-48298021 Msa0734390:CDS 50.0%
TACAGGCCATCAACGGTTGT+TGG - chr5_1:48298613-48298632 None:intergenic 50.0%
ATCTCTACTCCCCCATCTAC+GGG - chr5_1:48298848-48298867 None:intergenic 50.0%
AGGGATGTTGTTGAGGCGGA+GGG + chr5_1:48297080-48297099 Msa0734390:CDS 55.0%
TTGTTGAGGCGGAGGGAGAT+GGG + chr5_1:48297087-48297106 Msa0734390:CDS 55.0%
! GAGAGGGAGGAGGGAGTATA+TGG + chr5_1:48297127-48297146 Msa0734390:CDS 55.0%
ACAGCTGGGGTCAATCTTCG+TGG + chr5_1:48297161-48297180 Msa0734390:CDS 55.0%
! GGCGTATTTGATGGCCATGG+AGG + chr5_1:48297694-48297713 Msa0734390:CDS 55.0%
TGCCGCAAATTCAGCGGCTT+TGG - chr5_1:48297722-48297741 None:intergenic 55.0%
TAGTAGAGGAGGGGTTGCTG+AGG + chr5_1:48297942-48297961 Msa0734390:CDS 55.0%
CGCGGTGTTTGGAGGATTCA+AGG + chr5_1:48298164-48298183 Msa0734390:CDS 55.0%
AGGGATGTTGTTGAGGCGGA+GGG + chr5_1:48297080-48297099 Msa0734390:CDS 55.0%
TTGTTGAGGCGGAGGGAGAT+GGG + chr5_1:48297087-48297106 Msa0734390:CDS 55.0%
! GAGAGGGAGGAGGGAGTATA+TGG + chr5_1:48297127-48297146 Msa0734390:CDS 55.0%
ACAGCTGGGGTCAATCTTCG+TGG + chr5_1:48297161-48297180 Msa0734390:CDS 55.0%
! GGCGTATTTGATGGCCATGG+AGG + chr5_1:48297694-48297713 Msa0734390:CDS 55.0%
TGCCGCAAATTCAGCGGCTT+TGG - chr5_1:48297722-48297741 None:intergenic 55.0%
TAGTAGAGGAGGGGTTGCTG+AGG + chr5_1:48297942-48297961 Msa0734390:CDS 55.0%
CGCGGTGTTTGGAGGATTCA+AGG + chr5_1:48298164-48298183 Msa0734390:CDS 55.0%
CGGCGAATTCGAAACCGCGA+CGG - chr5_1:48296754-48296773 None:intergenic 60.0%
CGTCGCGGTTTCGAATTCGC+CGG + chr5_1:48296752-48296771 Msa0734390:CDS 60.0%
GGTGGCGAGGGATGTTGTTG+AGG + chr5_1:48297073-48297092 Msa0734390:CDS 60.0%
GGCGAGGGATGTTGTTGAGG+CGG + chr5_1:48297076-48297095 Msa0734390:CDS 60.0%
GAGGGATGTTGTTGAGGCGG+AGG + chr5_1:48297079-48297098 Msa0734390:CDS 60.0%
GTTGTTGAGGCGGAGGGAGA+TGG + chr5_1:48297086-48297105 Msa0734390:CDS 60.0%
GTTGAGGAGGCGGTGAAACG+TGG + chr5_1:48297796-48297815 Msa0734390:CDS 60.0%
CGGCGAATTCGAAACCGCGA+CGG - chr5_1:48296754-48296773 None:intergenic 60.0%
CGTCGCGGTTTCGAATTCGC+CGG + chr5_1:48296752-48296771 Msa0734390:CDS 60.0%
GGTGGCGAGGGATGTTGTTG+AGG + chr5_1:48297073-48297092 Msa0734390:CDS 60.0%
GGCGAGGGATGTTGTTGAGG+CGG + chr5_1:48297076-48297095 Msa0734390:CDS 60.0%
GAGGGATGTTGTTGAGGCGG+AGG + chr5_1:48297079-48297098 Msa0734390:CDS 60.0%
GTTGTTGAGGCGGAGGGAGA+TGG + chr5_1:48297086-48297105 Msa0734390:CDS 60.0%
GTTGAGGAGGCGGTGAAACG+TGG + chr5_1:48297796-48297815 Msa0734390:CDS 60.0%
TGTTCCGGCGACACCGTCTG+CGG + chr5_1:48297052-48297071 Msa0734390:CDS 65.0%
ACATCCCTCGCCACCGCAGA+CGG - chr5_1:48297068-48297087 None:intergenic 65.0%
! CAGCGGCTTTGGCACCTCCA+TGG - chr5_1:48297711-48297730 None:intergenic 65.0%
TGTTCCGGCGACACCGTCTG+CGG + chr5_1:48297052-48297071 Msa0734390:CDS 65.0%
ACATCCCTCGCCACCGCAGA+CGG - chr5_1:48297068-48297087 None:intergenic 65.0%
! CAGCGGCTTTGGCACCTCCA+TGG - chr5_1:48297711-48297730 None:intergenic 65.0%
GACACCGTCTGCGGTGGCGA+GGG + chr5_1:48297061-48297080 Msa0734390:CDS 70.0%
GACACCGTCTGCGGTGGCGA+GGG + chr5_1:48297061-48297080 Msa0734390:CDS 70.0%
TCCGGCGACACCGTCTGCGG+TGG + chr5_1:48297055-48297074 Msa0734390:CDS 75.0%
!! GCCACCGCAGACGGTGTCGC+CGG - chr5_1:48297059-48297078 None:intergenic 75.0%
CGACACCGTCTGCGGTGGCG+AGG + chr5_1:48297060-48297079 Msa0734390:CDS 75.0%
TCCGGCGACACCGTCTGCGG+TGG + chr5_1:48297055-48297074 Msa0734390:CDS 75.0%
!! GCCACCGCAGACGGTGTCGC+CGG - chr5_1:48297059-48297078 None:intergenic 75.0%
CGACACCGTCTGCGGTGGCG+AGG + chr5_1:48297060-48297079 Msa0734390:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 48296617 48298983 48296617 ID=Msa0734390;Name=Msa0734390
chr5_1 mRNA 48296617 48298983 48296617 ID=Msa0734390-mRNA-1;Parent=Msa0734390;Name=Msa0734390-mRNA-1;_AED=0.09;_eAED=0.09;_QI=124|1|1|1|1|1|4|268|378
chr5_1 exon 48296617 48297196 48296617 ID=Msa0734390-mRNA-1:exon:13831;Parent=Msa0734390-mRNA-1
chr5_1 exon 48297685 48298023 48297685 ID=Msa0734390-mRNA-1:exon:13832;Parent=Msa0734390-mRNA-1
chr5_1 exon 48298143 48298322 48298143 ID=Msa0734390-mRNA-1:exon:13833;Parent=Msa0734390-mRNA-1
chr5_1 exon 48298554 48298983 48298554 ID=Msa0734390-mRNA-1:exon:13834;Parent=Msa0734390-mRNA-1
chr5_1 five_prime_UTR 48296617 48296740 48296617 ID=Msa0734390-mRNA-1:five_prime_utr;Parent=Msa0734390-mRNA-1
chr5_1 CDS 48296741 48297196 48296741 ID=Msa0734390-mRNA-1:cds;Parent=Msa0734390-mRNA-1
chr5_1 CDS 48297685 48298023 48297685 ID=Msa0734390-mRNA-1:cds;Parent=Msa0734390-mRNA-1
chr5_1 CDS 48298143 48298322 48298143 ID=Msa0734390-mRNA-1:cds;Parent=Msa0734390-mRNA-1
chr5_1 CDS 48298554 48298715 48298554 ID=Msa0734390-mRNA-1:cds;Parent=Msa0734390-mRNA-1
chr5_1 three_prime_UTR 48298716 48298983 48298716 ID=Msa0734390-mRNA-1:three_prime_utr;Parent=Msa0734390-mRNA-1
Gene Sequence

>Msa0734390

ATGTCTTGCTCCGTCGCGGTTTCGAATTCGCCGGTGTTTTCACCTTCTTCATCTCTTTTCTGCAACAAATCTGAATCGTTAACGTTATCTCTTTCTCATCTCAAACCATCTTCAACAACAACAACGACGTCTTCATCGTCTTCTTCTTCGCCTTCTCCTTGTTCTTCACCTTCTTCACCTTTTTGTCTTCGATTACCGAAACTACCCTTGGTTTTTACGTCAAACAAAGATTCTGGGTCGCAGAATGATGCTGTTTTGAAGAGGAAACGACCTACCAGGCTTAATATACCTGTTTCTGAACATGCTTTTTGTGTTCCGGCGACACCGTCTGCGGTGGCGAGGGATGTTGTTGAGGCGGAGGGAGATGGGTATTCTGTTTATTGTAAGAGAGGGAGGAGGGAGTATATGGAAGATCGTTATACAGCTGGGGTCAATCTTCGTGGTGAAAATAATTTGGCCTTTTTTGGCGTATTTGATGGCCATGGAGGTGCCAAAGCCGCTGAATTTGCGGCAAATAACTTAGAAAAGAATATCTTGGATGAAGTTATCATGAGCGACGAAGATGATGTTGAGGAGGCGGTGAAACGTGGTTACCTCAATACCGATTCTGAGTTCATGAAAAAAGATCTACATGGTGGTTCTTGCTGTGTAACAGCATTCATTAGGAATGGTAACTTAGTTGTGTCTAATGCTGGTGATTGCCGTGCTGTTATTAGTAGAGGAGGGGTTGCTGAGGCACTAACATCTGATCACCGACCTTCAAGGGAAGACGAAAAGGACAGAATCGAGACCCTGGGTGGTTATGTTGATTTATGTCGCGGTGTTTGGAGGATTCAAGGATCTCTTGCTGTATCAAGAGGAATCGGAGATCGACACTTGAAACAATGGGTGACAGCAGAGCCTGAGACTAAAGTTGTTAGAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAAGCAGTAGACATTGCTCGTCAATTTTGCGTAGGAAATAACAACCAACAACCGTTGATGGCCTGTAAAAAGCTTGCACAATTGTCTGTTTCAAGAGGCTCTTTGGATGATACCAGTGTCATGATAATCAAATTGAAACACTATGTTTAG
Protein sequence

>Msa0734390

MSCSVAVSNSPVFSPSSSLFCNKSESLTLSLSHLKPSSTTTTTSSSSSSSPSPCSSPSSPFCLRLPKLPLVFTSNKDSGSQNDAVLKRKRPTRLNIPVSEHAFCVPATPSAVARDVVEAEGDGYSVYCKRGRREYMEDRYTAGVNLRGENNLAFFGVFDGHGGAKAAEFAANNLEKNILDEVIMSDEDDVEEAVKRGYLNTDSEFMKKDLHGGSCCVTAFIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDEKDRIETLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVVRIEPEHDLLILASDGLWDKVSNQEAVDIARQFCVGNNNQQPLMACKKLAQLSVSRGSLDDTSVMIIKLKHYV*