Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361250 | XP_003600684.1 | 96.811 | 439 | 14 | 0 | 1 | 439 | 1 | 439 | 0.0 | 861 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361250 | sp|Q5PNY6|PUB21_ARATH | 45.894 | 414 | 207 | 8 | 33 | 438 | 28 | 432 | 1.11e-109 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361250 | G7J8Q8 | 96.811 | 439 | 14 | 0 | 1 | 439 | 1 | 439 | 0.0 | 861 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0060070 | Msa1361250 | 0.800428 | 1.448308e-48 | -8.615850e-47 |
| Msa0071480 | Msa1361250 | 0.813872 | 2.054343e-51 | -8.615850e-47 |
| Msa0119440 | Msa1361250 | 0.862684 | 4.256802e-64 | -8.615850e-47 |
| Msa1361250 | Msa1364160 | 0.816975 | 4.190319e-52 | -8.615850e-47 |
| Msa1361250 | Msa1405220 | 0.832234 | 1.061684e-55 | -8.615850e-47 |
| Msa1361250 | Msa1421890 | 0.807908 | 4.017308e-50 | -8.615850e-47 |
| Msa1361250 | Msa1421900 | 0.889372 | 2.568961e-73 | -8.615850e-47 |
| Msa1361250 | Msa1424350 | 0.801775 | 7.677630e-49 | -8.615850e-47 |
| Msa1361250 | Msa1462470 | 0.806745 | 7.085324e-50 | -8.615850e-47 |
| Msa1361250 | Msa1465180 | 0.804082 | 2.561884e-49 | -8.615850e-47 |
| Msa0616450 | Msa1361250 | 0.827066 | 1.921122e-54 | -8.615850e-47 |
| Msa0655920 | Msa1361250 | 0.821269 | 4.416123e-53 | -8.615850e-47 |
| Msa0734390 | Msa1361250 | 0.818704 | 1.705938e-52 | -8.615850e-47 |
| Msa0748660 | Msa1361250 | 0.855743 | 5.139543e-62 | -8.615850e-47 |
| Msa0758250 | Msa1361250 | 0.800244 | 1.578542e-48 | -8.615850e-47 |
| Msa0775920 | Msa1361250 | 0.852037 | 6.001973e-61 | -8.615850e-47 |
| Msa0776750 | Msa1361250 | 0.812163 | 4.867193e-51 | -8.615850e-47 |
| Msa0813260 | Msa1361250 | 0.875667 | 2.571812e-68 | -8.615850e-47 |
| Msa0128430 | Msa1361250 | 0.805785 | 1.128778e-49 | -8.615850e-47 |
| Msa0162690 | Msa1361250 | 0.823105 | 1.656330e-53 | -8.615850e-47 |
| Msa0194010 | Msa1361250 | 0.808120 | 3.619759e-50 | -8.615850e-47 |
| Msa0235880 | Msa1361250 | 0.802247 | 6.141587e-49 | -8.615850e-47 |
| Msa1225100 | Msa1361250 | 0.819088 | 1.395034e-52 | -8.615850e-47 |
| Msa1266330 | Msa1361250 | 0.826864 | 2.146843e-54 | -8.615850e-47 |
| Msa1285200 | Msa1361250 | 0.817549 | 3.113094e-52 | -8.615850e-47 |
| Msa1329870 | Msa1361250 | 0.819173 | 1.334405e-52 | -8.615850e-47 |
| Msa1334400 | Msa1361250 | 0.818804 | 1.618891e-52 | -8.615850e-47 |
| Msa1334490 | Msa1361250 | 0.804180 | 2.444125e-49 | -8.615850e-47 |
| Msa0382370 | Msa1361250 | 0.807724 | 4.396169e-50 | -8.615850e-47 |
| Msa0418400 | Msa1361250 | 0.847224 | 1.323525e-59 | -8.615850e-47 |
| Msa0418410 | Msa1361250 | 0.816200 | 6.250973e-52 | -8.615850e-47 |
| Msa0437070 | Msa1361250 | 0.867828 | 1.026105e-65 | -8.615850e-47 |
| Msa0463490 | Msa1361250 | 0.807139 | 5.849050e-50 | -8.615850e-47 |
| Msa0472710 | Msa1361250 | 0.861616 | 9.049449e-64 | -8.615850e-47 |
| Msa0472720 | Msa1361250 | 0.867449 | 1.357339e-65 | -8.615850e-47 |
| Msa0472760 | Msa1361250 | 0.835566 | 1.557028e-56 | -8.615850e-47 |
| Msa0472770 | Msa1361250 | 0.855264 | 7.090717e-62 | -8.615850e-47 |
| Msa1074540 | Msa1361250 | 0.836936 | 6.984860e-57 | -8.615850e-47 |
| Msa1078330 | Msa1361250 | 0.847547 | 1.079372e-59 | -8.615850e-47 |
| Msa1089270 | Msa1361250 | 0.820669 | 6.070883e-53 | -8.615850e-47 |
| Msa0246590 | Msa1361250 | 0.824298 | 8.706838e-54 | -8.615850e-47 |
| Msa0282720 | Msa1361250 | 0.804462 | 2.135529e-49 | -8.615850e-47 |
| Msa0285070 | Msa1361250 | 0.824990 | 5.983456e-54 | -8.615850e-47 |
| Msa0305620 | Msa1361250 | 0.836367 | 9.754665e-57 | -8.615850e-47 |
| Msa0358110 | Msa1361250 | 0.853433 | 2.397269e-61 | -8.615850e-47 |
| Msa0358120 | Msa1361250 | 0.867871 | 9.942310e-66 | -8.615850e-47 |
| Msa1108720 | Msa1361250 | 0.805910 | 1.062320e-49 | -8.615850e-47 |
| Msa1114040 | Msa1361250 | 0.802005 | 6.887810e-49 | -8.615850e-47 |
| Msa1123720 | Msa1361250 | 0.862799 | 3.923691e-64 | -8.615850e-47 |
| Msa1220000 | Msa1361250 | 0.818962 | 1.490389e-52 | -8.615850e-47 |
| Msa0514610 | Msa1361250 | 0.807282 | 5.454432e-50 | -8.615850e-47 |
| Msa0581970 | Msa1361250 | 0.850172 | 2.016391e-60 | -8.615850e-47 |
| Msa0583670 | Msa1361250 | 0.804535 | 2.061898e-49 | -8.615850e-47 |
| Msa0853810 | Msa1361250 | 0.837282 | 5.697789e-57 | -8.615850e-47 |
| Msa0860250 | Msa1361250 | 0.844493 | 7.307912e-59 | -8.615850e-47 |
| Msa0968050 | Msa1361250 | 0.804656 | 1.945003e-49 | -8.615850e-47 |
| Msa0973070 | Msa1361250 | 0.873154 | 1.831923e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361250 | MtrunA17_Chr3g0110121 | 96.811 | 439 | 14 | 0 | 1 | 439 | 1 | 439 | 0.0 | 861 |
| Msa1361250 | MtrunA17_Chr5g0434171 | 64.334 | 443 | 149 | 8 | 1 | 438 | 1 | 439 | 0.0 | 545 |
| Msa1361250 | MtrunA17_Chr6g0479261 | 47.733 | 419 | 201 | 7 | 33 | 438 | 22 | 435 | 4.07e-125 | 370 |
| Msa1361250 | MtrunA17_Chr5g0420471 | 47.494 | 419 | 202 | 7 | 33 | 438 | 22 | 435 | 1.65e-123 | 365 |
| Msa1361250 | MtrunA17_Chr7g0267501 | 35.225 | 423 | 247 | 11 | 32 | 436 | 4 | 417 | 1.63e-61 | 205 |
| Msa1361250 | MtrunA17_Chr1g0177261 | 34.389 | 442 | 242 | 11 | 32 | 436 | 3 | 433 | 4.37e-61 | 204 |
| Msa1361250 | MtrunA17_Chr2g0322021 | 35.238 | 420 | 240 | 11 | 31 | 436 | 1 | 402 | 2.21e-60 | 202 |
| Msa1361250 | MtrunA17_Chr1g0177281 | 34.163 | 442 | 243 | 11 | 32 | 436 | 3 | 433 | 3.83e-60 | 202 |
| Msa1361250 | MtrunA17_Chr4g0044631 | 32.767 | 412 | 247 | 10 | 34 | 434 | 12 | 404 | 8.67e-59 | 198 |
| Msa1361250 | MtrunA17_Chr1g0177271 | 33.710 | 442 | 245 | 11 | 32 | 436 | 3 | 433 | 2.15e-52 | 182 |
| Msa1361250 | MtrunA17_Chr1g0177301 | 31.830 | 399 | 246 | 13 | 31 | 416 | 1 | 386 | 1.22e-48 | 171 |
| Msa1361250 | MtrunA17_Chr4g0025501 | 27.990 | 418 | 264 | 14 | 33 | 429 | 3 | 404 | 5.10e-41 | 150 |
| Msa1361250 | MtrunA17_Chr4g0031431 | 26.379 | 417 | 266 | 13 | 25 | 426 | 244 | 634 | 1.07e-35 | 139 |
| Msa1361250 | MtrunA17_Chr5g0437411 | 27.711 | 415 | 250 | 13 | 34 | 419 | 291 | 684 | 6.37e-34 | 134 |
| Msa1361250 | MtrunA17_Chr8g0384041 | 26.014 | 419 | 278 | 12 | 34 | 435 | 8 | 411 | 3.84e-33 | 129 |
| Msa1361250 | MtrunA17_Chr4g0044411 | 25.935 | 401 | 260 | 11 | 32 | 418 | 269 | 646 | 4.76e-33 | 131 |
| Msa1361250 | MtrunA17_Chr3g0129811 | 24.821 | 419 | 281 | 11 | 34 | 435 | 81 | 482 | 6.83e-33 | 129 |
| Msa1361250 | MtrunA17_Chr7g0237931 | 26.799 | 403 | 243 | 17 | 36 | 419 | 237 | 606 | 4.96e-32 | 128 |
| Msa1361250 | MtrunA17_Chr5g0400971 | 27.390 | 387 | 253 | 8 | 36 | 417 | 67 | 430 | 2.96e-29 | 119 |
| Msa1361250 | MtrunA17_Chr4g0059201 | 29.630 | 378 | 226 | 14 | 3 | 360 | 286 | 643 | 1.10e-28 | 119 |
| Msa1361250 | MtrunA17_Chr1g0199321 | 26.361 | 349 | 221 | 11 | 36 | 370 | 247 | 573 | 5.68e-27 | 114 |
| Msa1361250 | MtrunA17_Chr7g0248251 | 24.085 | 328 | 220 | 8 | 9 | 324 | 240 | 550 | 1.21e-26 | 112 |
| Msa1361250 | MtrunA17_Chr1g0152291 | 27.885 | 416 | 243 | 13 | 26 | 417 | 31 | 413 | 6.06e-26 | 109 |
| Msa1361250 | MtrunA17_Chr2g0284461 | 28.125 | 320 | 180 | 14 | 34 | 328 | 290 | 584 | 7.62e-26 | 110 |
| Msa1361250 | MtrunA17_Chr4g0013091 | 28.435 | 313 | 164 | 13 | 22 | 319 | 295 | 562 | 1.58e-25 | 109 |
| Msa1361250 | MtrunA17_Chr3g0122721 | 28.571 | 308 | 168 | 8 | 37 | 335 | 281 | 545 | 2.53e-23 | 103 |
| Msa1361250 | MtrunA17_Chr7g0275081 | 47.000 | 100 | 45 | 3 | 32 | 131 | 74 | 165 | 1.44e-20 | 93.6 |
| Msa1361250 | MtrunA17_Chr7g0234671 | 52.174 | 69 | 33 | 0 | 34 | 102 | 76 | 144 | 4.57e-20 | 92.4 |
| Msa1361250 | MtrunA17_Chr4g0048811 | 23.196 | 388 | 226 | 13 | 35 | 420 | 4 | 321 | 4.77e-20 | 90.9 |
| Msa1361250 | MtrunA17_Chr3g0117851 | 27.851 | 377 | 220 | 16 | 37 | 383 | 276 | 630 | 6.39e-20 | 92.4 |
| Msa1361250 | MtrunA17_Chr5g0413681 | 45.133 | 113 | 46 | 4 | 40 | 141 | 284 | 391 | 1.77e-19 | 91.3 |
| Msa1361250 | MtrunA17_Chr7g0261371 | 45.946 | 74 | 40 | 0 | 34 | 107 | 239 | 312 | 1.79e-19 | 91.3 |
| Msa1361250 | MtrunA17_Chr1g0183781 | 47.143 | 70 | 37 | 0 | 34 | 103 | 239 | 308 | 2.02e-18 | 88.2 |
| Msa1361250 | MtrunA17_Chr2g0280671 | 24.937 | 397 | 245 | 14 | 21 | 400 | 1 | 361 | 5.06e-18 | 85.5 |
| Msa1361250 | MtrunA17_Chr8g0377151 | 39.560 | 91 | 49 | 1 | 37 | 127 | 283 | 367 | 5.34e-18 | 86.7 |
| Msa1361250 | MtrunA17_Chr8g0373031 | 23.789 | 475 | 293 | 14 | 17 | 433 | 258 | 721 | 3.87e-17 | 84.0 |
| Msa1361250 | MtrunA17_Chr1g0189811 | 25.000 | 292 | 190 | 10 | 34 | 314 | 61 | 334 | 1.76e-16 | 81.3 |
| Msa1361250 | MtrunA17_Chr3g0106931 | 41.892 | 74 | 43 | 0 | 34 | 107 | 231 | 304 | 3.31e-15 | 78.2 |
| Msa1361250 | MtrunA17_Chr2g0328101 | 45.070 | 71 | 39 | 0 | 32 | 102 | 736 | 806 | 1.31e-14 | 76.3 |
| Msa1361250 | MtrunA17_Chr5g0404311 | 38.372 | 86 | 49 | 2 | 32 | 117 | 269 | 350 | 1.52e-14 | 75.9 |
| Msa1361250 | MtrunA17_Chr7g0275961 | 26.459 | 257 | 158 | 7 | 40 | 292 | 259 | 488 | 3.27e-14 | 75.1 |
| Msa1361250 | MtrunA17_Chr3g0130281 | 72.093 | 43 | 12 | 0 | 33 | 75 | 7 | 49 | 4.21e-14 | 72.8 |
| Msa1361250 | MtrunA17_Chr1g0198984 | 48.276 | 58 | 30 | 0 | 49 | 106 | 1 | 58 | 8.57e-14 | 67.8 |
| Msa1361250 | MtrunA17_Chr1g0196911 | 40.625 | 96 | 48 | 4 | 31 | 118 | 497 | 591 | 4.18e-13 | 71.6 |
| Msa1361250 | MtrunA17_Chr8g0390311 | 38.636 | 88 | 48 | 2 | 22 | 108 | 386 | 468 | 9.31e-13 | 70.5 |
| Msa1361250 | MtrunA17_Chr5g0412171 | 34.247 | 73 | 48 | 0 | 36 | 108 | 732 | 804 | 3.67e-12 | 68.6 |
| Msa1361250 | MtrunA17_Chr3g0144071 | 24.399 | 291 | 172 | 10 | 40 | 316 | 34 | 290 | 3.92e-12 | 68.6 |
| Msa1361250 | MtrunA17_Chr1g0202971 | 36.364 | 66 | 42 | 0 | 37 | 102 | 649 | 714 | 1.09e-11 | 67.0 |
| Msa1361250 | MtrunA17_Chr3g0079031 | 43.939 | 66 | 36 | 1 | 37 | 102 | 731 | 795 | 1.09e-11 | 67.0 |
| Msa1361250 | MtrunA17_Chr7g0247831 | 36.364 | 66 | 42 | 0 | 37 | 102 | 827 | 892 | 3.06e-11 | 65.9 |
| Msa1361250 | MtrunA17_Chr8g0346441 | 41.176 | 68 | 40 | 0 | 40 | 107 | 263 | 330 | 7.12e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1361250 | AT5G37490.1 | 45.894 | 414 | 207 | 8 | 33 | 438 | 28 | 432 | 1.13e-110 | 333 |
| Msa1361250 | AT1G66160.1 | 41.346 | 416 | 217 | 9 | 33 | 438 | 30 | 428 | 2.47e-101 | 309 |
| Msa1361250 | AT1G66160.2 | 38.942 | 416 | 211 | 10 | 33 | 438 | 30 | 412 | 1.51e-89 | 278 |
| Msa1361250 | AT3G02840.1 | 42.486 | 346 | 180 | 7 | 107 | 438 | 36 | 376 | 9.16e-77 | 244 |
| Msa1361250 | AT2G35930.1 | 35.154 | 421 | 248 | 8 | 27 | 436 | 3 | 409 | 4.75e-64 | 212 |
| Msa1361250 | AT3G19380.1 | 32.990 | 388 | 230 | 12 | 34 | 406 | 12 | 384 | 8.27e-54 | 185 |
| Msa1361250 | AT1G49780.1 | 33.417 | 398 | 241 | 11 | 34 | 418 | 12 | 398 | 9.08e-54 | 185 |
| Msa1361250 | AT3G11840.1 | 32.159 | 454 | 248 | 13 | 32 | 437 | 6 | 447 | 8.69e-47 | 167 |
| Msa1361250 | AT5G09800.1 | 28.101 | 395 | 257 | 12 | 35 | 418 | 10 | 388 | 8.42e-34 | 131 |
| Msa1361250 | AT2G28830.1 | 27.230 | 426 | 268 | 14 | 16 | 424 | 166 | 566 | 2.42e-33 | 132 |
| Msa1361250 | AT5G64660.1 | 27.206 | 408 | 258 | 13 | 34 | 418 | 8 | 399 | 4.66e-33 | 129 |
| Msa1361250 | AT3G46510.1 | 26.209 | 393 | 255 | 12 | 36 | 416 | 256 | 625 | 2.06e-32 | 130 |
| Msa1361250 | AT3G49810.1 | 25.700 | 393 | 264 | 6 | 36 | 423 | 64 | 433 | 1.69e-31 | 125 |
| Msa1361250 | AT1G23030.1 | 26.617 | 402 | 249 | 14 | 32 | 418 | 237 | 607 | 3.50e-31 | 126 |
| Msa1361250 | AT1G71020.2 | 26.877 | 413 | 255 | 14 | 26 | 418 | 85 | 470 | 5.89e-31 | 124 |
| Msa1361250 | AT1G71020.1 | 26.877 | 413 | 255 | 14 | 26 | 418 | 233 | 618 | 1.92e-30 | 124 |
| Msa1361250 | AT5G65920.1 | 25.570 | 395 | 266 | 6 | 36 | 425 | 60 | 431 | 1.08e-29 | 120 |
| Msa1361250 | AT5G65920.2 | 25.570 | 395 | 266 | 6 | 36 | 425 | 60 | 431 | 1.08e-29 | 120 |
| Msa1361250 | AT3G18710.1 | 26.238 | 404 | 261 | 12 | 34 | 418 | 10 | 395 | 3.78e-27 | 112 |
| Msa1361250 | AT3G54850.1 | 26.750 | 400 | 251 | 14 | 36 | 419 | 248 | 621 | 2.09e-26 | 112 |
| Msa1361250 | AT5G42340.1 | 24.242 | 264 | 182 | 6 | 34 | 293 | 288 | 537 | 4.02e-22 | 99.8 |
| Msa1361250 | AT3G07360.1 | 50.000 | 76 | 38 | 0 | 31 | 106 | 69 | 144 | 2.28e-20 | 93.6 |
| Msa1361250 | AT1G29340.1 | 44.037 | 109 | 53 | 3 | 34 | 134 | 303 | 411 | 7.54e-20 | 92.8 |
| Msa1361250 | AT1G10560.1 | 28.024 | 339 | 211 | 14 | 42 | 362 | 294 | 617 | 2.55e-19 | 91.3 |
| Msa1361250 | AT4G21350.1 | 25.962 | 312 | 198 | 10 | 36 | 339 | 5 | 291 | 6.19e-19 | 88.6 |
| Msa1361250 | AT5G01830.1 | 27.740 | 292 | 174 | 9 | 30 | 306 | 268 | 537 | 1.06e-18 | 89.4 |
| Msa1361250 | AT1G27910.1 | 41.758 | 91 | 47 | 1 | 37 | 127 | 280 | 364 | 1.20e-18 | 89.4 |
| Msa1361250 | AT1G60190.1 | 25.145 | 346 | 232 | 11 | 40 | 370 | 282 | 615 | 3.33e-18 | 87.8 |
| Msa1361250 | AT3G54790.2 | 49.315 | 73 | 37 | 0 | 34 | 106 | 200 | 272 | 5.52e-18 | 87.0 |
| Msa1361250 | AT3G54790.3 | 49.315 | 73 | 37 | 0 | 34 | 106 | 236 | 308 | 7.07e-18 | 86.7 |
| Msa1361250 | AT3G54790.1 | 49.315 | 73 | 37 | 0 | 34 | 106 | 236 | 308 | 7.07e-18 | 86.7 |
| Msa1361250 | AT1G67530.3 | 45.000 | 80 | 40 | 1 | 37 | 116 | 273 | 348 | 9.20e-18 | 85.9 |
| Msa1361250 | AT1G24330.1 | 40.659 | 91 | 48 | 1 | 37 | 127 | 276 | 360 | 1.14e-17 | 86.3 |
| Msa1361250 | AT1G24330.2 | 40.659 | 91 | 48 | 1 | 37 | 127 | 276 | 360 | 1.14e-17 | 86.3 |
| Msa1361250 | AT1G67530.2 | 45.000 | 80 | 40 | 1 | 37 | 116 | 273 | 348 | 1.19e-17 | 86.3 |
| Msa1361250 | AT1G67530.1 | 45.000 | 80 | 40 | 1 | 37 | 116 | 273 | 348 | 1.19e-17 | 86.3 |
| Msa1361250 | AT1G67530.4 | 45.000 | 80 | 40 | 1 | 37 | 116 | 273 | 348 | 1.19e-17 | 86.3 |
| Msa1361250 | AT5G67340.1 | 44.737 | 76 | 42 | 0 | 34 | 109 | 238 | 313 | 1.34e-16 | 82.8 |
| Msa1361250 | AT5G67340.2 | 44.737 | 76 | 42 | 0 | 34 | 109 | 238 | 313 | 1.34e-16 | 82.8 |
| Msa1361250 | AT3G52450.1 | 33.146 | 178 | 111 | 2 | 263 | 436 | 260 | 433 | 2.76e-16 | 80.9 |
| Msa1361250 | AT4G36550.1 | 40.278 | 72 | 43 | 0 | 35 | 106 | 218 | 289 | 4.02e-15 | 78.2 |
| Msa1361250 | AT1G01660.2 | 35.556 | 90 | 57 | 1 | 18 | 107 | 481 | 569 | 7.37e-15 | 77.0 |
| Msa1361250 | AT1G01660.1 | 35.556 | 90 | 57 | 1 | 18 | 107 | 480 | 568 | 7.63e-15 | 77.0 |
| Msa1361250 | AT2G45920.1 | 41.096 | 73 | 43 | 0 | 37 | 109 | 326 | 398 | 8.66e-15 | 76.3 |
| Msa1361250 | AT1G01680.1 | 38.571 | 70 | 43 | 0 | 40 | 109 | 237 | 306 | 1.03e-14 | 75.1 |
| Msa1361250 | AT2G23140.1 | 35.714 | 98 | 59 | 1 | 34 | 131 | 231 | 324 | 2.19e-14 | 75.9 |
| Msa1361250 | AT2G23140.2 | 35.714 | 98 | 59 | 1 | 34 | 131 | 228 | 321 | 2.26e-14 | 75.9 |
| Msa1361250 | AT2G23140.4 | 35.714 | 98 | 59 | 1 | 34 | 131 | 228 | 321 | 2.26e-14 | 75.9 |
| Msa1361250 | AT2G23140.3 | 37.000 | 100 | 57 | 2 | 34 | 131 | 39 | 134 | 3.97e-14 | 75.1 |
| Msa1361250 | AT2G23140.5 | 37.000 | 100 | 57 | 2 | 34 | 131 | 39 | 134 | 3.97e-14 | 75.1 |
| Msa1361250 | AT5G57035.1 | 40.909 | 66 | 39 | 0 | 37 | 102 | 709 | 774 | 1.06e-13 | 73.9 |
| Msa1361250 | AT1G56030.1 | 42.857 | 70 | 40 | 0 | 31 | 100 | 318 | 387 | 4.40e-13 | 70.9 |
| Msa1361250 | AT5G51270.2 | 44.286 | 70 | 38 | 1 | 37 | 106 | 736 | 804 | 6.23e-13 | 71.2 |
| Msa1361250 | AT5G51270.1 | 44.286 | 70 | 38 | 1 | 37 | 106 | 736 | 804 | 6.23e-13 | 71.2 |
| Msa1361250 | AT5G65500.1 | 40.299 | 67 | 40 | 0 | 36 | 102 | 715 | 781 | 6.87e-13 | 71.2 |
| Msa1361250 | AT5G65500.2 | 40.299 | 67 | 40 | 0 | 36 | 102 | 723 | 789 | 6.90e-13 | 71.2 |
| Msa1361250 | AT2G19410.3 | 43.939 | 66 | 36 | 1 | 37 | 102 | 712 | 776 | 8.03e-13 | 71.2 |
| Msa1361250 | AT2G19410.2 | 43.939 | 66 | 36 | 1 | 37 | 102 | 747 | 811 | 8.20e-13 | 71.2 |
| Msa1361250 | AT2G19410.1 | 43.939 | 66 | 36 | 1 | 37 | 102 | 726 | 790 | 8.25e-13 | 70.9 |
| Msa1361250 | AT3G61390.4 | 37.879 | 66 | 41 | 0 | 37 | 102 | 279 | 344 | 3.52e-12 | 68.2 |
| Msa1361250 | AT3G61390.2 | 37.879 | 66 | 41 | 0 | 37 | 102 | 354 | 419 | 4.69e-12 | 68.2 |
| Msa1361250 | AT3G49060.2 | 37.879 | 66 | 41 | 0 | 37 | 102 | 726 | 791 | 5.55e-12 | 68.6 |
| Msa1361250 | AT3G49060.1 | 37.879 | 66 | 41 | 0 | 37 | 102 | 736 | 801 | 5.73e-12 | 68.6 |
| Msa1361250 | AT3G49060.3 | 37.879 | 66 | 41 | 0 | 37 | 102 | 703 | 768 | 6.08e-12 | 68.2 |
| Msa1361250 | AT1G56040.1 | 40.625 | 64 | 38 | 0 | 37 | 100 | 354 | 417 | 1.20e-11 | 66.6 |
| Msa1361250 | AT4G25160.1 | 40.909 | 66 | 38 | 1 | 37 | 102 | 767 | 831 | 7.87e-11 | 64.7 |
Find 75 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATTGTTGATGGAGAAAA+AGG | 0.166972 | tig0017414:+8640 | Msa1361250:CDS |
| GAAAGTTTCTGATTTGTAAC+TGG | 0.278770 | tig0017414:-7938 | None:intergenic |
| TAGTGAAAAGTTTGTTGAAT+TGG | 0.291875 | tig0017414:+8594 | Msa1361250:CDS |
| TGAGGAACATGTTGTTGTTT+TGG | 0.298411 | tig0017414:+8267 | Msa1361250:CDS |
| ATTCCTGTTGATAGAGTTAC+TGG | 0.298592 | tig0017414:-7860 | None:intergenic |
| CATCTTTGAATTGTTTAGTT+TGG | 0.299040 | tig0017414:+8368 | Msa1361250:CDS |
| AGGAATAAGAGGGTTATAAT+AGG | 0.322167 | tig0017414:+8187 | Msa1361250:CDS |
| AGTGAAAAGTTTGTTGAATT+GGG | 0.337948 | tig0017414:+8595 | Msa1361250:CDS |
| TGAGTTTGTTGGAAAGATTA+AGG | 0.348264 | tig0017414:+8144 | Msa1361250:CDS |
| TTGCTTGAAACAATTGTTGA+TGG | 0.366375 | tig0017414:+8631 | Msa1361250:CDS |
| GTTGTCGGGTTGTAGAAATT+TGG | 0.371187 | tig0017414:+8105 | Msa1361250:CDS |
| TGTGTTGAAAATAGTTCTTA+TGG | 0.375679 | tig0017414:+8013 | Msa1361250:CDS |
| TGAAGGTGTTGTTGAGGGTT+TGG | 0.377823 | tig0017414:+8474 | Msa1361250:CDS |
| GAGAGAGTGAGAGGAATAAG+AGG | 0.381694 | tig0017414:+8176 | Msa1361250:CDS |
| AAGATTGTTAAGGAACCAAT+TGG | 0.381968 | tig0017414:+8499 | Msa1361250:CDS |
| GACTCACCGGACAACGGAAA+TGG | 0.385326 | tig0017414:-7820 | None:intergenic |
| GAAGATGCTTTGTGAGAAGA+AGG | 0.393306 | tig0017414:+8819 | Msa1361250:CDS |
| TAATTCGCCGTCGCCGGCGC+CGG | 0.395081 | tig0017414:-7771 | None:intergenic |
| CGCCGGCGACGGCGAATTAA+CGG | 0.401684 | tig0017414:+7775 | Msa1361250:CDS |
| AAGAGGGTTATAATAGGAAA+TGG | 0.402171 | tig0017414:+8193 | Msa1361250:CDS |
| TTTGTAGCACTTGACCCAAT+TGG | 0.406484 | tig0017414:-8514 | None:intergenic |
| CCCAACCCATTTCCGTTGTC+CGG | 0.411042 | tig0017414:+7814 | Msa1361250:CDS |
| CACCGTTAATTCGCCGTCGC+CGG | 0.412333 | tig0017414:-7777 | None:intergenic |
| TGTTTATGTGATTGTAAGAA+AGG | 0.414472 | tig0017414:+8694 | Msa1361250:CDS |
| TGTTGGTTATGTTGCAAGTT+GGG | 0.414797 | tig0017414:+8890 | Msa1361250:CDS |
| AAAGCAAAACACCAACTTCC+CGG | 0.416680 | tig0017414:+7752 | Msa1361250:CDS |
| AATTCGCCGTCGCCGGCGCC+GGG | 0.439130 | tig0017414:-7770 | None:intergenic |
| GTGTTGAAAATAGTTCTTAT+GGG | 0.440410 | tig0017414:+8014 | Msa1361250:CDS |
| TGAAAAGGCACTAGGTGTAT+TGG | 0.441241 | tig0017414:+8669 | Msa1361250:CDS |
| TTAACCTCGTACGCTGAAAC+AGG | 0.447425 | tig0017414:-8064 | None:intergenic |
| CGTCGCCGGCGCCGGGAAGT+TGG | 0.449959 | tig0017414:-7763 | None:intergenic |
| TTGGAAAGATTAAGGTTTGG+TGG | 0.456739 | tig0017414:+8152 | Msa1361250:CDS |
| GGTTTGTACTAGGTTGTTGT+CGG | 0.456977 | tig0017414:+8090 | Msa1361250:CDS |
| CCGGACAACGGAAATGGGTT+GGG | 0.459441 | tig0017414:-7814 | None:intergenic |
| GATCCAGTAACTCTATCAAC+AGG | 0.465887 | tig0017414:+7857 | Msa1361250:CDS |
| GGGTTTGGTGAAGATTGTTA+AGG | 0.467901 | tig0017414:+8489 | Msa1361250:CDS |
| AGAATTGAAGGTGTTGTTGA+GGG | 0.472391 | tig0017414:+8469 | Msa1361250:CDS |
| ATAGATTCAGCATCGAGAAA+TGG | 0.477438 | tig0017414:+7891 | Msa1361250:CDS |
| AGGTTAATGAGGTTTGTACT+AGG | 0.482538 | tig0017414:+8080 | Msa1361250:CDS |
| ACTCACCGGACAACGGAAAT+GGG | 0.483936 | tig0017414:-7819 | None:intergenic |
| GAAGAGTTATCAAGAATTGA+AGG | 0.485697 | tig0017414:+8457 | Msa1361250:CDS |
| ACCGGACAACGGAAATGGGT+TGG | 0.495073 | tig0017414:-7815 | None:intergenic |
| GTTTATGTGATTGTAAGAAA+GGG | 0.496421 | tig0017414:+8695 | Msa1361250:CDS |
| TTGTTGGAAAGATTAAGGTT+TGG | 0.496940 | tig0017414:+8149 | Msa1361250:CDS |
| AGAGAGTGAGAGGAATAAGA+GGG | 0.507848 | tig0017414:+8177 | Msa1361250:CDS |
| ATCGAGAAATGGATCGAAGC+TGG | 0.513343 | tig0017414:+7902 | Msa1361250:CDS |
| TTGTTGGTTATGTTGCAAGT+TGG | 0.518220 | tig0017414:+8889 | Msa1361250:CDS |
| CAACTTCCCGGCGCCGGCGA+CGG | 0.518938 | tig0017414:+7764 | Msa1361250:CDS |
| TTTGGTGGAGAGAGAGTGAG+AGG | 0.525448 | tig0017414:+8167 | Msa1361250:CDS |
| GTTTGTACTAGGTTGTTGTC+GGG | 0.528503 | tig0017414:+8091 | Msa1361250:CDS |
| AAAGTTTCTGATTTGTAACT+GGG | 0.529983 | tig0017414:-7937 | None:intergenic |
| AGAAACATGTTCCGCCGCAC+CGG | 0.531078 | tig0017414:+7728 | Msa1361250:CDS |
| AAAAGCTTCTTAATCACAAG+AGG | 0.544112 | tig0017414:-8751 | None:intergenic |
| GAGTTGTTGAAATTGTTGAA+TGG | 0.546361 | tig0017414:+8943 | Msa1361250:CDS |
| AAACACCAACTTCCCGGCGC+CGG | 0.546949 | tig0017414:+7758 | Msa1361250:CDS |
| TTGATTGAAGCAATTCAACT+TGG | 0.549684 | tig0017414:+8853 | Msa1361250:CDS |
| AAGAATTGAAGGTGTTGTTG+AGG | 0.552708 | tig0017414:+8468 | Msa1361250:CDS |
| TTCAGCGTACGAGGTTAATG+AGG | 0.552963 | tig0017414:+8069 | Msa1361250:CDS |
| GAAACAGGTATACGAGGTGT+TGG | 0.554990 | tig0017414:-8049 | None:intergenic |
| GTGATTTGGTGTGATTTCGA+AGG | 0.579587 | tig0017414:-7963 | None:intergenic |
| TTCATCAAGTCTAGACTCAC+CGG | 0.580014 | tig0017414:-7833 | None:intergenic |
| AGATTGTTAAGGAACCAATT+GGG | 0.580879 | tig0017414:+8500 | Msa1361250:CDS |
| CGACGGCGAATTAACGGTGG+AGG | 0.584194 | tig0017414:+7781 | Msa1361250:CDS |
| TATGTTGCAAGTTGGGTGTG+AGG | 0.588109 | tig0017414:+8897 | Msa1361250:CDS |
| AAGGGAAAGAGGTTGTTCAA+AGG | 0.593560 | tig0017414:+8713 | Msa1361250:CDS |
| TGATTGTAAGAAAGGGAAAG+AGG | 0.594131 | tig0017414:+8702 | Msa1361250:CDS |
| TATACCTGTTTCAGCGTACG+AGG | 0.604860 | tig0017414:+8060 | Msa1361250:CDS |
| CTCGATGCTGAATCTATCGT+AGG | 0.614355 | tig0017414:-7885 | None:intergenic |
| GGGATATGTGAAAAGGCACT+AGG | 0.622666 | tig0017414:+8661 | Msa1361250:CDS |
| ACAGCAAAACTAGAAGCCAA+AGG | 0.636688 | tig0017414:-8784 | None:intergenic |
| AGTCTAGACTCACCGGACAA+CGG | 0.656680 | tig0017414:-7826 | None:intergenic |
| TGGGTGTGAGGAGAAAACAA+AGG | 0.673609 | tig0017414:+8909 | Msa1361250:CDS |
| GTGTGAGGAGAAAACAAAGG+AGG | 0.681227 | tig0017414:+8912 | Msa1361250:CDS |
| TACGCTGAAACAGGTATACG+AGG | 0.716974 | tig0017414:-8055 | None:intergenic |
| CGGCGACGGCGAATTAACGG+TGG | 0.722796 | tig0017414:+7778 | Msa1361250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAGATGGTAAAGATTT+AGG | + | tig0017414:8391-8410 | Msa1361250:CDS | 20.0% |
| !!! | TTTTTAGATGGTAAAGATTT+AGG | + | tig0017414:8391-8410 | Msa1361250:CDS | 20.0% |
| !! | AAAGTTTCTGATTTGTAACT+GGG | - | tig0017414:7940-7959 | None:intergenic | 25.0% |
| !! | ATTTTTCTTATGGTGTGATT+TGG | - | tig0017414:7980-7999 | None:intergenic | 25.0% |
| !!! | ACTCTGAATCATTTTTCTTA+TGG | - | tig0017414:7990-8009 | None:intergenic | 25.0% |
| ! | TAAGAAAAATGATTCAGAGT+TGG | + | tig0017414:7990-8009 | Msa1361250:CDS | 25.0% |
| ! | TGTGTTGAAAATAGTTCTTA+TGG | + | tig0017414:8013-8032 | Msa1361250:CDS | 25.0% |
| ! | GTGTTGAAAATAGTTCTTAT+GGG | + | tig0017414:8014-8033 | Msa1361250:CDS | 25.0% |
| !! | TTTTTCATGTGTTTCTTTTG+AGG | + | tig0017414:8249-8268 | Msa1361250:CDS | 25.0% |
| !!! | AGATTTTGGAGATTTTAACA+TGG | + | tig0017414:8293-8312 | Msa1361250:CDS | 25.0% |
| ! | CATCTTTGAATTGTTTAGTT+TGG | + | tig0017414:8368-8387 | Msa1361250:CDS | 25.0% |
| !!! | TGTTTAGTTTGGTTTTTAGA+TGG | + | tig0017414:8379-8398 | Msa1361250:CDS | 25.0% |
| !!! | TTTGACTACAATTTTCAAGT+TGG | + | tig0017414:8543-8562 | Msa1361250:CDS | 25.0% |
| !!! | AATTTTCAAGTTGGTTTCAT+CGG | + | tig0017414:8552-8571 | Msa1361250:CDS | 25.0% |
| !!! | TAGTGAAAAGTTTGTTGAAT+TGG | + | tig0017414:8594-8613 | Msa1361250:CDS | 25.0% |
| !!! | AGTGAAAAGTTTGTTGAATT+GGG | + | tig0017414:8595-8614 | Msa1361250:CDS | 25.0% |
| ! | TGTTTATGTGATTGTAAGAA+AGG | + | tig0017414:8694-8713 | Msa1361250:CDS | 25.0% |
| ! | GTTTATGTGATTGTAAGAAA+GGG | + | tig0017414:8695-8714 | Msa1361250:CDS | 25.0% |
| !! | AAAGTTTCTGATTTGTAACT+GGG | - | tig0017414:7940-7959 | None:intergenic | 25.0% |
| !! | ATTTTTCTTATGGTGTGATT+TGG | - | tig0017414:7980-7999 | None:intergenic | 25.0% |
| !!! | ACTCTGAATCATTTTTCTTA+TGG | - | tig0017414:7990-8009 | None:intergenic | 25.0% |
| ! | TAAGAAAAATGATTCAGAGT+TGG | + | tig0017414:7990-8009 | Msa1361250:CDS | 25.0% |
| ! | TGTGTTGAAAATAGTTCTTA+TGG | + | tig0017414:8013-8032 | Msa1361250:CDS | 25.0% |
| ! | GTGTTGAAAATAGTTCTTAT+GGG | + | tig0017414:8014-8033 | Msa1361250:CDS | 25.0% |
| !! | TTTTTCATGTGTTTCTTTTG+AGG | + | tig0017414:8249-8268 | Msa1361250:CDS | 25.0% |
| !!! | AGATTTTGGAGATTTTAACA+TGG | + | tig0017414:8293-8312 | Msa1361250:CDS | 25.0% |
| ! | CATCTTTGAATTGTTTAGTT+TGG | + | tig0017414:8368-8387 | Msa1361250:CDS | 25.0% |
| !!! | TGTTTAGTTTGGTTTTTAGA+TGG | + | tig0017414:8379-8398 | Msa1361250:CDS | 25.0% |
| !!! | TTTGACTACAATTTTCAAGT+TGG | + | tig0017414:8543-8562 | Msa1361250:CDS | 25.0% |
| !!! | AATTTTCAAGTTGGTTTCAT+CGG | + | tig0017414:8552-8571 | Msa1361250:CDS | 25.0% |
| !!! | TAGTGAAAAGTTTGTTGAAT+TGG | + | tig0017414:8594-8613 | Msa1361250:CDS | 25.0% |
| !!! | AGTGAAAAGTTTGTTGAATT+GGG | + | tig0017414:8595-8614 | Msa1361250:CDS | 25.0% |
| ! | TGTTTATGTGATTGTAAGAA+AGG | + | tig0017414:8694-8713 | Msa1361250:CDS | 25.0% |
| ! | GTTTATGTGATTGTAAGAAA+GGG | + | tig0017414:8695-8714 | Msa1361250:CDS | 25.0% |
| ! | GAAAGTTTCTGATTTGTAAC+TGG | - | tig0017414:7941-7960 | None:intergenic | 30.0% |
| ! | AAAAAGTGTGTTGAGTTTGT+TGG | + | tig0017414:8133-8152 | Msa1361250:CDS | 30.0% |
| !! | TGAGTTTGTTGGAAAGATTA+AGG | + | tig0017414:8144-8163 | Msa1361250:CDS | 30.0% |
| TTGTTGGAAAGATTAAGGTT+TGG | + | tig0017414:8149-8168 | Msa1361250:CDS | 30.0% | |
| AGGAATAAGAGGGTTATAAT+AGG | + | tig0017414:8187-8206 | Msa1361250:CDS | 30.0% | |
| AAGAGGGTTATAATAGGAAA+TGG | + | tig0017414:8193-8212 | Msa1361250:CDS | 30.0% | |
| !!! | AGTTTGTTCTGTTTTAGCTA+CGG | + | tig0017414:8216-8235 | Msa1361250:CDS | 30.0% |
| GAAGAGTTATCAAGAATTGA+AGG | + | tig0017414:8457-8476 | Msa1361250:CDS | 30.0% | |
| AAGATTGTTAAGGAACCAAT+TGG | + | tig0017414:8499-8518 | Msa1361250:CDS | 30.0% | |
| AGATTGTTAAGGAACCAATT+GGG | + | tig0017414:8500-8519 | Msa1361250:CDS | 30.0% | |
| TTGCTTGAAACAATTGTTGA+TGG | + | tig0017414:8631-8650 | Msa1361250:CDS | 30.0% | |
| ! | ACAATTGTTGATGGAGAAAA+AGG | + | tig0017414:8640-8659 | Msa1361250:CDS | 30.0% |
| ! | CAATTGTTGATGGAGAAAAA+GGG | + | tig0017414:8641-8660 | Msa1361250:CDS | 30.0% |
| AGAAAAAGGGATATGTGAAA+AGG | + | tig0017414:8654-8673 | Msa1361250:CDS | 30.0% | |
| AAAAGCTTCTTAATCACAAG+AGG | - | tig0017414:8754-8773 | None:intergenic | 30.0% | |
| ! | TTGTGATTAAGAAGCTTTTG+AGG | + | tig0017414:8755-8774 | Msa1361250:CDS | 30.0% |
| ! | TGTGATTAAGAAGCTTTTGA+GGG | + | tig0017414:8756-8775 | Msa1361250:CDS | 30.0% |
| TTGATTGAAGCAATTCAACT+TGG | + | tig0017414:8853-8872 | Msa1361250:CDS | 30.0% | |
| GAGTTGTTGAAATTGTTGAA+TGG | + | tig0017414:8943-8962 | Msa1361250:CDS | 30.0% | |
| ! | GAAAGTTTCTGATTTGTAAC+TGG | - | tig0017414:7941-7960 | None:intergenic | 30.0% |
| ! | AAAAAGTGTGTTGAGTTTGT+TGG | + | tig0017414:8133-8152 | Msa1361250:CDS | 30.0% |
| !! | TGAGTTTGTTGGAAAGATTA+AGG | + | tig0017414:8144-8163 | Msa1361250:CDS | 30.0% |
| TTGTTGGAAAGATTAAGGTT+TGG | + | tig0017414:8149-8168 | Msa1361250:CDS | 30.0% | |
| AGGAATAAGAGGGTTATAAT+AGG | + | tig0017414:8187-8206 | Msa1361250:CDS | 30.0% | |
| AAGAGGGTTATAATAGGAAA+TGG | + | tig0017414:8193-8212 | Msa1361250:CDS | 30.0% | |
| !!! | AGTTTGTTCTGTTTTAGCTA+CGG | + | tig0017414:8216-8235 | Msa1361250:CDS | 30.0% |
| GAAGAGTTATCAAGAATTGA+AGG | + | tig0017414:8457-8476 | Msa1361250:CDS | 30.0% | |
| AAGATTGTTAAGGAACCAAT+TGG | + | tig0017414:8499-8518 | Msa1361250:CDS | 30.0% | |
| AGATTGTTAAGGAACCAATT+GGG | + | tig0017414:8500-8519 | Msa1361250:CDS | 30.0% | |
| TTGCTTGAAACAATTGTTGA+TGG | + | tig0017414:8631-8650 | Msa1361250:CDS | 30.0% | |
| ! | ACAATTGTTGATGGAGAAAA+AGG | + | tig0017414:8640-8659 | Msa1361250:CDS | 30.0% |
| ! | CAATTGTTGATGGAGAAAAA+GGG | + | tig0017414:8641-8660 | Msa1361250:CDS | 30.0% |
| AGAAAAAGGGATATGTGAAA+AGG | + | tig0017414:8654-8673 | Msa1361250:CDS | 30.0% | |
| AAAAGCTTCTTAATCACAAG+AGG | - | tig0017414:8754-8773 | None:intergenic | 30.0% | |
| ! | TTGTGATTAAGAAGCTTTTG+AGG | + | tig0017414:8755-8774 | Msa1361250:CDS | 30.0% |
| ! | TGTGATTAAGAAGCTTTTGA+GGG | + | tig0017414:8756-8775 | Msa1361250:CDS | 30.0% |
| TTGATTGAAGCAATTCAACT+TGG | + | tig0017414:8853-8872 | Msa1361250:CDS | 30.0% | |
| GAGTTGTTGAAATTGTTGAA+TGG | + | tig0017414:8943-8962 | Msa1361250:CDS | 30.0% | |
| ! | ATTCCTGTTGATAGAGTTAC+TGG | - | tig0017414:7863-7882 | None:intergenic | 35.0% |
| ! | ATAGATTCAGCATCGAGAAA+TGG | + | tig0017414:7891-7910 | Msa1361250:CDS | 35.0% |
| AGGTTAATGAGGTTTGTACT+AGG | + | tig0017414:8080-8099 | Msa1361250:CDS | 35.0% | |
| TTGGAAAGATTAAGGTTTGG+TGG | + | tig0017414:8152-8171 | Msa1361250:CDS | 35.0% | |
| !!! | TGAGGAACATGTTGTTGTTT+TGG | + | tig0017414:8267-8286 | Msa1361250:CDS | 35.0% |
| !!! | TGTTGTTTTGGAGGAGATTT+TGG | + | tig0017414:8279-8298 | Msa1361250:CDS | 35.0% |
| !! | AAGAATTGAAGGTGTTGTTG+AGG | + | tig0017414:8468-8487 | Msa1361250:CDS | 35.0% |
| !! | AGAATTGAAGGTGTTGTTGA+GGG | + | tig0017414:8469-8488 | Msa1361250:CDS | 35.0% |
| TGATTGTAAGAAAGGGAAAG+AGG | + | tig0017414:8702-8721 | Msa1361250:CDS | 35.0% | |
| ! | TGGTGCTTTTCAGAAATTGT+TGG | + | tig0017414:8873-8892 | Msa1361250:CDS | 35.0% |
| ! | TTGTTGGTTATGTTGCAAGT+TGG | + | tig0017414:8889-8908 | Msa1361250:CDS | 35.0% |
| ! | TGTTGGTTATGTTGCAAGTT+GGG | + | tig0017414:8890-8909 | Msa1361250:CDS | 35.0% |
| ! | ATTCCTGTTGATAGAGTTAC+TGG | - | tig0017414:7863-7882 | None:intergenic | 35.0% |
| ! | ATAGATTCAGCATCGAGAAA+TGG | + | tig0017414:7891-7910 | Msa1361250:CDS | 35.0% |
| AGGTTAATGAGGTTTGTACT+AGG | + | tig0017414:8080-8099 | Msa1361250:CDS | 35.0% | |
| TTGGAAAGATTAAGGTTTGG+TGG | + | tig0017414:8152-8171 | Msa1361250:CDS | 35.0% | |
| !!! | TGAGGAACATGTTGTTGTTT+TGG | + | tig0017414:8267-8286 | Msa1361250:CDS | 35.0% |
| !!! | TGTTGTTTTGGAGGAGATTT+TGG | + | tig0017414:8279-8298 | Msa1361250:CDS | 35.0% |
| !! | AAGAATTGAAGGTGTTGTTG+AGG | + | tig0017414:8468-8487 | Msa1361250:CDS | 35.0% |
| !! | AGAATTGAAGGTGTTGTTGA+GGG | + | tig0017414:8469-8488 | Msa1361250:CDS | 35.0% |
| TGATTGTAAGAAAGGGAAAG+AGG | + | tig0017414:8702-8721 | Msa1361250:CDS | 35.0% | |
| ! | TGGTGCTTTTCAGAAATTGT+TGG | + | tig0017414:8873-8892 | Msa1361250:CDS | 35.0% |
| ! | TTGTTGGTTATGTTGCAAGT+TGG | + | tig0017414:8889-8908 | Msa1361250:CDS | 35.0% |
| ! | TGTTGGTTATGTTGCAAGTT+GGG | + | tig0017414:8890-8909 | Msa1361250:CDS | 35.0% |
| !!! | AAGTTGGTGTTTTGCTTTGC+CGG | - | tig0017414:7750-7769 | None:intergenic | 40.0% |
| AAAGCAAAACACCAACTTCC+CGG | + | tig0017414:7752-7771 | Msa1361250:CDS | 40.0% | |
| TTCATCAAGTCTAGACTCAC+CGG | - | tig0017414:7836-7855 | None:intergenic | 40.0% | |
| GATCCAGTAACTCTATCAAC+AGG | + | tig0017414:7857-7876 | Msa1361250:CDS | 40.0% | |
| !! | GTGATTTGGTGTGATTTCGA+AGG | - | tig0017414:7966-7985 | None:intergenic | 40.0% |
| GGTTTGTACTAGGTTGTTGT+CGG | + | tig0017414:8090-8109 | Msa1361250:CDS | 40.0% | |
| GTTTGTACTAGGTTGTTGTC+GGG | + | tig0017414:8091-8110 | Msa1361250:CDS | 40.0% | |
| ! | GTTGTCGGGTTGTAGAAATT+TGG | + | tig0017414:8105-8124 | Msa1361250:CDS | 40.0% |
| AGAGAGTGAGAGGAATAAGA+GGG | + | tig0017414:8177-8196 | Msa1361250:CDS | 40.0% | |
| !!! | GGAACATGTTGTTGTTTTGG+AGG | + | tig0017414:8270-8289 | Msa1361250:CDS | 40.0% |
| ! | CGTTTTCGAATCGCTAAAAG+AGG | - | tig0017414:8329-8348 | None:intergenic | 40.0% |
| !! | GGGTTTGGTGAAGATTGTTA+AGG | + | tig0017414:8489-8508 | Msa1361250:CDS | 40.0% |
| TTTGTAGCACTTGACCCAAT+TGG | - | tig0017414:8517-8536 | None:intergenic | 40.0% | |
| !! | TGAAAAGGCACTAGGTGTAT+TGG | + | tig0017414:8669-8688 | Msa1361250:CDS | 40.0% |
| AAGGGAAAGAGGTTGTTCAA+AGG | + | tig0017414:8713-8732 | Msa1361250:CDS | 40.0% | |
| ACAGCAAAACTAGAAGCCAA+AGG | - | tig0017414:8787-8806 | None:intergenic | 40.0% | |
| !!! | TTGGCTTCTAGTTTTGCTGT+TGG | + | tig0017414:8787-8806 | Msa1361250:CDS | 40.0% |
| !!! | TGGCTTCTAGTTTTGCTGTT+GGG | + | tig0017414:8788-8807 | Msa1361250:CDS | 40.0% |
| !!! | GTTTTGCTGTTGGGATTGTT+AGG | + | tig0017414:8797-8816 | Msa1361250:CDS | 40.0% |
| GAAGATGCTTTGTGAGAAGA+AGG | + | tig0017414:8819-8838 | Msa1361250:CDS | 40.0% | |
| !!! | AAGTTGGTGTTTTGCTTTGC+CGG | - | tig0017414:7750-7769 | None:intergenic | 40.0% |
| AAAGCAAAACACCAACTTCC+CGG | + | tig0017414:7752-7771 | Msa1361250:CDS | 40.0% | |
| TTCATCAAGTCTAGACTCAC+CGG | - | tig0017414:7836-7855 | None:intergenic | 40.0% | |
| GATCCAGTAACTCTATCAAC+AGG | + | tig0017414:7857-7876 | Msa1361250:CDS | 40.0% | |
| !! | GTGATTTGGTGTGATTTCGA+AGG | - | tig0017414:7966-7985 | None:intergenic | 40.0% |
| GGTTTGTACTAGGTTGTTGT+CGG | + | tig0017414:8090-8109 | Msa1361250:CDS | 40.0% | |
| GTTTGTACTAGGTTGTTGTC+GGG | + | tig0017414:8091-8110 | Msa1361250:CDS | 40.0% | |
| ! | GTTGTCGGGTTGTAGAAATT+TGG | + | tig0017414:8105-8124 | Msa1361250:CDS | 40.0% |
| AGAGAGTGAGAGGAATAAGA+GGG | + | tig0017414:8177-8196 | Msa1361250:CDS | 40.0% | |
| !!! | GGAACATGTTGTTGTTTTGG+AGG | + | tig0017414:8270-8289 | Msa1361250:CDS | 40.0% |
| ! | CGTTTTCGAATCGCTAAAAG+AGG | - | tig0017414:8329-8348 | None:intergenic | 40.0% |
| !! | GGGTTTGGTGAAGATTGTTA+AGG | + | tig0017414:8489-8508 | Msa1361250:CDS | 40.0% |
| TTTGTAGCACTTGACCCAAT+TGG | - | tig0017414:8517-8536 | None:intergenic | 40.0% | |
| !! | TGAAAAGGCACTAGGTGTAT+TGG | + | tig0017414:8669-8688 | Msa1361250:CDS | 40.0% |
| AAGGGAAAGAGGTTGTTCAA+AGG | + | tig0017414:8713-8732 | Msa1361250:CDS | 40.0% | |
| ACAGCAAAACTAGAAGCCAA+AGG | - | tig0017414:8787-8806 | None:intergenic | 40.0% | |
| !!! | TTGGCTTCTAGTTTTGCTGT+TGG | + | tig0017414:8787-8806 | Msa1361250:CDS | 40.0% |
| !!! | TGGCTTCTAGTTTTGCTGTT+GGG | + | tig0017414:8788-8807 | Msa1361250:CDS | 40.0% |
| !!! | GTTTTGCTGTTGGGATTGTT+AGG | + | tig0017414:8797-8816 | Msa1361250:CDS | 40.0% |
| GAAGATGCTTTGTGAGAAGA+AGG | + | tig0017414:8819-8838 | Msa1361250:CDS | 40.0% | |
| CTCGATGCTGAATCTATCGT+AGG | - | tig0017414:7888-7907 | None:intergenic | 45.0% | |
| ATCGAGAAATGGATCGAAGC+TGG | + | tig0017414:7902-7921 | Msa1361250:CDS | 45.0% | |
| GAAACAGGTATACGAGGTGT+TGG | - | tig0017414:8052-8071 | None:intergenic | 45.0% | |
| TACGCTGAAACAGGTATACG+AGG | - | tig0017414:8058-8077 | None:intergenic | 45.0% | |
| TATACCTGTTTCAGCGTACG+AGG | + | tig0017414:8060-8079 | Msa1361250:CDS | 45.0% | |
| TTAACCTCGTACGCTGAAAC+AGG | - | tig0017414:8067-8086 | None:intergenic | 45.0% | |
| TTCAGCGTACGAGGTTAATG+AGG | + | tig0017414:8069-8088 | Msa1361250:CDS | 45.0% | |
| GAGAGAGTGAGAGGAATAAG+AGG | + | tig0017414:8176-8195 | Msa1361250:CDS | 45.0% | |
| !! | TGAAGGTGTTGTTGAGGGTT+TGG | + | tig0017414:8474-8493 | Msa1361250:CDS | 45.0% |
| !! | GGGATATGTGAAAAGGCACT+AGG | + | tig0017414:8661-8680 | Msa1361250:CDS | 45.0% |
| ! | TATGTTGCAAGTTGGGTGTG+AGG | + | tig0017414:8897-8916 | Msa1361250:CDS | 45.0% |
| TGGGTGTGAGGAGAAAACAA+AGG | + | tig0017414:8909-8928 | Msa1361250:CDS | 45.0% | |
| GTGTGAGGAGAAAACAAAGG+AGG | + | tig0017414:8912-8931 | Msa1361250:CDS | 45.0% | |
| CTCGATGCTGAATCTATCGT+AGG | - | tig0017414:7888-7907 | None:intergenic | 45.0% | |
| ATCGAGAAATGGATCGAAGC+TGG | + | tig0017414:7902-7921 | Msa1361250:CDS | 45.0% | |
| GAAACAGGTATACGAGGTGT+TGG | - | tig0017414:8052-8071 | None:intergenic | 45.0% | |
| TACGCTGAAACAGGTATACG+AGG | - | tig0017414:8058-8077 | None:intergenic | 45.0% | |
| TATACCTGTTTCAGCGTACG+AGG | + | tig0017414:8060-8079 | Msa1361250:CDS | 45.0% | |
| TTAACCTCGTACGCTGAAAC+AGG | - | tig0017414:8067-8086 | None:intergenic | 45.0% | |
| TTCAGCGTACGAGGTTAATG+AGG | + | tig0017414:8069-8088 | Msa1361250:CDS | 45.0% | |
| GAGAGAGTGAGAGGAATAAG+AGG | + | tig0017414:8176-8195 | Msa1361250:CDS | 45.0% | |
| !! | TGAAGGTGTTGTTGAGGGTT+TGG | + | tig0017414:8474-8493 | Msa1361250:CDS | 45.0% |
| !! | GGGATATGTGAAAAGGCACT+AGG | + | tig0017414:8661-8680 | Msa1361250:CDS | 45.0% |
| ! | TATGTTGCAAGTTGGGTGTG+AGG | + | tig0017414:8897-8916 | Msa1361250:CDS | 45.0% |
| TGGGTGTGAGGAGAAAACAA+AGG | + | tig0017414:8909-8928 | Msa1361250:CDS | 45.0% | |
| GTGTGAGGAGAAAACAAAGG+AGG | + | tig0017414:8912-8931 | Msa1361250:CDS | 45.0% | |
| ACTCACCGGACAACGGAAAT+GGG | - | tig0017414:7822-7841 | None:intergenic | 50.0% | |
| AGTCTAGACTCACCGGACAA+CGG | - | tig0017414:7829-7848 | None:intergenic | 50.0% | |
| TTTGGTGGAGAGAGAGTGAG+AGG | + | tig0017414:8167-8186 | Msa1361250:CDS | 50.0% | |
| !!! | GCTTTTGAGGGTGTCTCCTT+TGG | + | tig0017414:8768-8787 | Msa1361250:CDS | 50.0% |
| ACTCACCGGACAACGGAAAT+GGG | - | tig0017414:7822-7841 | None:intergenic | 50.0% | |
| AGTCTAGACTCACCGGACAA+CGG | - | tig0017414:7829-7848 | None:intergenic | 50.0% | |
| TTTGGTGGAGAGAGAGTGAG+AGG | + | tig0017414:8167-8186 | Msa1361250:CDS | 50.0% | |
| !!! | GCTTTTGAGGGTGTCTCCTT+TGG | + | tig0017414:8768-8787 | Msa1361250:CDS | 50.0% |
| AGAAACATGTTCCGCCGCAC+CGG | + | tig0017414:7728-7747 | Msa1361250:CDS | 55.0% | |
| ! | GGTGTTTTGCTTTGCCGGTG+CGG | - | tig0017414:7745-7764 | None:intergenic | 55.0% |
| ! | CCGGACAACGGAAATGGGTT+GGG | - | tig0017414:7817-7836 | None:intergenic | 55.0% |
| CCCAACCCATTTCCGTTGTC+CGG | + | tig0017414:7814-7833 | Msa1361250:CDS | 55.0% | |
| ACCGGACAACGGAAATGGGT+TGG | - | tig0017414:7818-7837 | None:intergenic | 55.0% | |
| GACTCACCGGACAACGGAAA+TGG | - | tig0017414:7823-7842 | None:intergenic | 55.0% | |
| AGAAACATGTTCCGCCGCAC+CGG | + | tig0017414:7728-7747 | Msa1361250:CDS | 55.0% | |
| ! | GGTGTTTTGCTTTGCCGGTG+CGG | - | tig0017414:7745-7764 | None:intergenic | 55.0% |
| ! | CCGGACAACGGAAATGGGTT+GGG | - | tig0017414:7817-7836 | None:intergenic | 55.0% |
| CCCAACCCATTTCCGTTGTC+CGG | + | tig0017414:7814-7833 | Msa1361250:CDS | 55.0% | |
| ACCGGACAACGGAAATGGGT+TGG | - | tig0017414:7818-7837 | None:intergenic | 55.0% | |
| GACTCACCGGACAACGGAAA+TGG | - | tig0017414:7823-7842 | None:intergenic | 55.0% | |
| ! | GTTTTGCTTTGCCGGTGCGG+CGG | - | tig0017414:7742-7761 | None:intergenic | 60.0% |
| AAACACCAACTTCCCGGCGC+CGG | + | tig0017414:7758-7777 | Msa1361250:CDS | 60.0% | |
| CACCGTTAATTCGCCGTCGC+CGG | - | tig0017414:7780-7799 | None:intergenic | 60.0% | |
| CGACGGCGAATTAACGGTGG+AGG | + | tig0017414:7781-7800 | Msa1361250:CDS | 60.0% | |
| ! | GTTTTGCTTTGCCGGTGCGG+CGG | - | tig0017414:7742-7761 | None:intergenic | 60.0% |
| AAACACCAACTTCCCGGCGC+CGG | + | tig0017414:7758-7777 | Msa1361250:CDS | 60.0% | |
| CACCGTTAATTCGCCGTCGC+CGG | - | tig0017414:7780-7799 | None:intergenic | 60.0% | |
| CGACGGCGAATTAACGGTGG+AGG | + | tig0017414:7781-7800 | Msa1361250:CDS | 60.0% | |
| CGCCGGCGACGGCGAATTAA+CGG | + | tig0017414:7775-7794 | Msa1361250:CDS | 65.0% | |
| CGGCGACGGCGAATTAACGG+TGG | + | tig0017414:7778-7797 | Msa1361250:CDS | 65.0% | |
| CGCCGGCGACGGCGAATTAA+CGG | + | tig0017414:7775-7794 | Msa1361250:CDS | 65.0% | |
| CGGCGACGGCGAATTAACGG+TGG | + | tig0017414:7778-7797 | Msa1361250:CDS | 65.0% | |
| TAATTCGCCGTCGCCGGCGC+CGG | - | tig0017414:7774-7793 | None:intergenic | 70.0% | |
| TAATTCGCCGTCGCCGGCGC+CGG | - | tig0017414:7774-7793 | None:intergenic | 70.0% | |
| !! | CAACTTCCCGGCGCCGGCGA+CGG | + | tig0017414:7764-7783 | Msa1361250:CDS | 75.0% |
| AATTCGCCGTCGCCGGCGCC+GGG | - | tig0017414:7773-7792 | None:intergenic | 75.0% | |
| !! | CAACTTCCCGGCGCCGGCGA+CGG | + | tig0017414:7764-7783 | Msa1361250:CDS | 75.0% |
| AATTCGCCGTCGCCGGCGCC+GGG | - | tig0017414:7773-7792 | None:intergenic | 75.0% | |
| !! | CGTCGCCGGCGCCGGGAAGT+TGG | - | tig0017414:7766-7785 | None:intergenic | 80.0% |
| !! | CGTCGCCGGCGCCGGGAAGT+TGG | - | tig0017414:7766-7785 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017414 | gene | 7707 | 9026 | 7707 | ID=Msa1361250;Name=Msa1361250 |
| tig0017414 | mRNA | 7707 | 9026 | 7707 | ID=Msa1361250-mRNA-1;Parent=Msa1361250;Name=Msa1361250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|439 |
| tig0017414 | exon | 7707 | 9026 | 7707 | ID=Msa1361250-mRNA-1:exon:12329;Parent=Msa1361250-mRNA-1 |
| tig0017414 | CDS | 7707 | 9026 | 7707 | ID=Msa1361250-mRNA-1:cds;Parent=Msa1361250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
