Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813260 | XP_003615726.1 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813260 | sp|Q8RX37|P2C02_ARATH | 62.468 | 389 | 122 | 7 | 1 | 376 | 1 | 378 | 1.33e-158 | 453 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813260 | G7JZL5 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 774 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012100 | Msa0813260 | 0.815083 | 1.108429e-51 | -8.615850e-47 |
| Msa0017320 | Msa0813260 | 0.827488 | 1.521997e-54 | -8.615850e-47 |
| Msa0030480 | Msa0813260 | 0.800140 | 1.657329e-48 | -8.615850e-47 |
| Msa0045550 | Msa0813260 | 0.805022 | 1.631684e-49 | -8.615850e-47 |
| Msa0055070 | Msa0813260 | 0.809581 | 1.763146e-50 | -8.615850e-47 |
| Msa0060070 | Msa0813260 | 0.808911 | 2.453510e-50 | -8.615850e-47 |
| Msa0071480 | Msa0813260 | 0.830635 | 2.628751e-55 | -8.615850e-47 |
| Msa0081940 | Msa0813260 | 0.824686 | 7.055574e-54 | -8.615850e-47 |
| Msa0082050 | Msa0813260 | 0.809258 | 2.068370e-50 | -8.615850e-47 |
| Msa0101020 | Msa0813260 | 0.818010 | 2.450157e-52 | -8.615850e-47 |
| Msa0111080 | Msa0813260 | 0.807911 | 4.010579e-50 | -8.615850e-47 |
| Msa0119440 | Msa0813260 | 0.892931 | 1.006790e-74 | -8.615850e-47 |
| Msa0609220 | Msa0813260 | 0.802389 | 5.742859e-49 | -8.615850e-47 |
| Msa0615680 | Msa0813260 | 0.807999 | 3.840690e-50 | -8.615850e-47 |
| Msa0616450 | Msa0813260 | 0.829043 | 6.418915e-55 | -8.615850e-47 |
| Msa0638350 | Msa0813260 | 0.832610 | 8.568446e-56 | -8.615850e-47 |
| Msa0638360 | Msa0813260 | 0.823505 | 1.335702e-53 | -8.615850e-47 |
| Msa0655920 | Msa0813260 | 0.818333 | 2.070382e-52 | -8.615850e-47 |
| Msa0659790 | Msa0813260 | 0.814085 | 1.843198e-51 | -8.615850e-47 |
| Msa0696850 | Msa0813260 | 0.803853 | 2.858411e-49 | -8.615850e-47 |
| Msa0705990 | Msa0813260 | 0.800273 | 1.556802e-48 | -8.615850e-47 |
| Msa0721340 | Msa0813260 | 0.809360 | 1.966694e-50 | -8.615850e-47 |
| Msa0732600 | Msa0813260 | 0.807347 | 5.284605e-50 | -8.615850e-47 |
| Msa0734390 | Msa0813260 | 0.824799 | 6.636425e-54 | -8.615850e-47 |
| Msa0748660 | Msa0813260 | 0.855339 | 6.741663e-62 | -8.615850e-47 |
| Msa0758250 | Msa0813260 | 0.842091 | 3.194643e-58 | -8.615850e-47 |
| Msa0764920 | Msa0813260 | 0.833557 | 4.979975e-56 | -8.615850e-47 |
| Msa0775560 | Msa0813260 | 0.817833 | 2.686190e-52 | -8.615850e-47 |
| Msa0775920 | Msa0813260 | 0.896759 | 2.708327e-76 | -8.615850e-47 |
| Msa0776750 | Msa0813260 | 0.819498 | 1.125470e-52 | -8.615850e-47 |
| Msa0779260 | Msa0813260 | 0.833366 | 5.556714e-56 | -8.615850e-47 |
| Msa0813260 | Msa0844610 | 0.838379 | 2.977686e-57 | -8.615850e-47 |
| Msa0813260 | Msa0847470 | 0.801717 | 7.891231e-49 | -8.615850e-47 |
| Msa0813260 | Msa0853810 | 0.958936 | 6.829048e-117 | -8.615850e-47 |
| Msa0813260 | Msa0857300 | 0.802792 | 4.741119e-49 | -8.615850e-47 |
| Msa0813260 | Msa0860250 | 0.809478 | 1.855520e-50 | -8.615850e-47 |
| Msa0813260 | Msa0865970 | 0.822764 | 1.989775e-53 | -8.615850e-47 |
| Msa0813260 | Msa0866070 | 0.817191 | 3.747584e-52 | -8.615850e-47 |
| Msa0813260 | Msa0877710 | 0.820381 | 7.067357e-53 | -8.615850e-47 |
| Msa0813260 | Msa0888990 | 0.805927 | 1.053918e-49 | -8.615850e-47 |
| Msa0813260 | Msa0914260 | 0.810850 | 9.391007e-51 | -8.615850e-47 |
| Msa0813260 | Msa0914290 | 0.805629 | 1.216947e-49 | -8.615850e-47 |
| Msa0813260 | Msa0944610 | 0.807774 | 4.289731e-50 | -8.615850e-47 |
| Msa0813260 | Msa0964960 | 0.845678 | 3.495491e-59 | -8.615850e-47 |
| Msa0813260 | Msa0968050 | 0.815179 | 1.055289e-51 | -8.615850e-47 |
| Msa0813260 | Msa0973070 | 0.839660 | 1.386998e-57 | -8.615850e-47 |
| Msa0813260 | Msa0980020 | 0.807887 | 4.058361e-50 | -8.615850e-47 |
| Msa0813260 | Msa1034700 | 0.838958 | 2.110698e-57 | -8.615850e-47 |
| Msa0813260 | Msa1063420 | 0.811932 | 5.466979e-51 | -8.615850e-47 |
| Msa0813260 | Msa1074540 | 0.861665 | 8.748244e-64 | -8.615850e-47 |
| Msa0813260 | Msa1076960 | 0.805141 | 1.540841e-49 | -8.615850e-47 |
| Msa0813260 | Msa1114040 | 0.800181 | 1.625572e-48 | -8.615850e-47 |
| Msa0813260 | Msa1122860 | 0.801342 | 9.418942e-49 | -8.615850e-47 |
| Msa0813260 | Msa1123720 | 0.819564 | 1.087012e-52 | -8.615850e-47 |
| Msa0813260 | Msa1158770 | 0.809390 | 1.937488e-50 | -8.615850e-47 |
| Msa0813260 | Msa1182130 | 0.803265 | 3.786597e-49 | -8.615850e-47 |
| Msa0813260 | Msa1184780 | 0.811058 | 8.465785e-51 | -8.615850e-47 |
| Msa0813260 | Msa1197070 | 0.800598 | 1.336955e-48 | -8.615850e-47 |
| Msa0813260 | Msa1206650 | 0.821542 | 3.820430e-53 | -8.615850e-47 |
| Msa0813260 | Msa1225100 | 0.877558 | 5.706618e-69 | -8.615850e-47 |
| Msa0813260 | Msa1238690 | 0.816004 | 6.914567e-52 | -8.615850e-47 |
| Msa0813260 | Msa1246700 | 0.813892 | 2.033563e-51 | -8.615850e-47 |
| Msa0813260 | Msa1258370 | 0.817648 | 2.956634e-52 | -8.615850e-47 |
| Msa0813260 | Msa1262020 | 0.815740 | 7.918625e-52 | -8.615850e-47 |
| Msa0813260 | Msa1266330 | 0.800785 | 1.224659e-48 | -8.615850e-47 |
| Msa0813260 | Msa1270660 | 0.812801 | 3.531660e-51 | -8.615850e-47 |
| Msa0813260 | Msa1277780 | 0.801861 | 7.374099e-49 | -8.615850e-47 |
| Msa0813260 | Msa1280150 | 0.847556 | 1.072891e-59 | -8.615850e-47 |
| Msa0813260 | Msa1280170 | 0.818641 | 1.762878e-52 | -8.615850e-47 |
| Msa0813260 | Msa1285200 | 0.857129 | 2.013707e-62 | -8.615850e-47 |
| Msa0813260 | Msa1307180 | 0.806557 | 7.764300e-50 | -8.615850e-47 |
| Msa0813260 | Msa1329870 | 0.878136 | 3.582925e-69 | -8.615850e-47 |
| Msa0813260 | Msa1332050 | 0.815449 | 9.191444e-52 | -8.615850e-47 |
| Msa0813260 | Msa1336040 | 0.804345 | 2.259133e-49 | -8.615850e-47 |
| Msa0813260 | Msa1344890 | 0.817646 | 2.960333e-52 | -8.615850e-47 |
| Msa0813260 | Msa1361250 | 0.875667 | 2.571812e-68 | -8.615850e-47 |
| Msa0813260 | Msa1365270 | 0.803705 | 3.068956e-49 | -8.615850e-47 |
| Msa0813260 | Msa1370590 | 0.824594 | 7.418671e-54 | -8.615850e-47 |
| Msa0813260 | Msa1376450 | 0.822004 | 2.986469e-53 | -8.615850e-47 |
| Msa0813260 | Msa1384100 | 0.824717 | 6.938212e-54 | -8.615850e-47 |
| Msa0813260 | Msa1389760 | 0.813702 | 2.239606e-51 | -8.615850e-47 |
| Msa0813260 | Msa1391550 | 0.852269 | 5.158276e-61 | -8.615850e-47 |
| Msa0813260 | Msa1405220 | 0.879999 | 7.873281e-70 | -8.615850e-47 |
| Msa0813260 | Msa1407190 | 0.802085 | 6.632491e-49 | -8.615850e-47 |
| Msa0813260 | Msa1408050 | 0.801491 | 8.782838e-49 | -8.615850e-47 |
| Msa0813260 | Msa1421890 | 0.800610 | 1.329177e-48 | -8.615850e-47 |
| Msa0813260 | Msa1421900 | 0.884864 | 1.331881e-71 | -8.615850e-47 |
| Msa0813260 | Msa1422810 | 0.800412 | 1.458688e-48 | -8.615850e-47 |
| Msa0813260 | Msa1424350 | 0.809315 | 2.010988e-50 | -8.615850e-47 |
| Msa0813260 | Msa1424630 | 0.809649 | 1.704279e-50 | -8.615850e-47 |
| Msa0813260 | Msa1432130 | 0.806753 | 7.056962e-50 | -8.615850e-47 |
| Msa0813260 | Msa1444120 | 0.824947 | 6.124004e-54 | -8.615850e-47 |
| Msa0813260 | Msa1444260 | 0.829998 | 3.761076e-55 | -8.615850e-47 |
| Msa0813260 | Msa1454450 | 0.810010 | 1.425617e-50 | -8.615850e-47 |
| Msa0813260 | Msa1457160 | 0.808931 | 2.430267e-50 | -8.615850e-47 |
| Msa0813260 | Msa1462470 | 0.810539 | 1.096358e-50 | -8.615850e-47 |
| Msa0813260 | Msa1465570 | 0.802035 | 6.791575e-49 | -8.615850e-47 |
| Msa0126880 | Msa0813260 | 0.802309 | 5.963060e-49 | -8.615850e-47 |
| Msa0128430 | Msa0813260 | 0.832026 | 1.195201e-55 | -8.615850e-47 |
| Msa0136630 | Msa0813260 | 0.824928 | 6.188325e-54 | -8.615850e-47 |
| Msa0137510 | Msa0813260 | 0.810640 | 1.042537e-50 | -8.615850e-47 |
| Msa0145110 | Msa0813260 | 0.808591 | 2.872840e-50 | -8.615850e-47 |
| Msa0154920 | Msa0813260 | 0.805937 | 1.048961e-49 | -8.615850e-47 |
| Msa0162690 | Msa0813260 | 0.868384 | 6.794371e-66 | -8.615850e-47 |
| Msa0163040 | Msa0813260 | 0.803296 | 3.730292e-49 | -8.615850e-47 |
| Msa0174260 | Msa0813260 | 0.818304 | 2.102417e-52 | -8.615850e-47 |
| Msa0187490 | Msa0813260 | 0.807899 | 4.033407e-50 | -8.615850e-47 |
| Msa0187830 | Msa0813260 | 0.817252 | 3.632070e-52 | -8.615850e-47 |
| Msa0192640 | Msa0813260 | 0.809764 | 1.610373e-50 | -8.615850e-47 |
| Msa0194010 | Msa0813260 | 0.848622 | 5.449811e-60 | -8.615850e-47 |
| Msa0197530 | Msa0813260 | 0.805019 | 1.633938e-49 | -8.615850e-47 |
| Msa0201570 | Msa0813260 | 0.807454 | 5.014325e-50 | -8.615850e-47 |
| Msa0202930 | Msa0813260 | 0.801428 | 9.047698e-49 | -8.615850e-47 |
| Msa0209080 | Msa0813260 | 0.802466 | 5.537309e-49 | -8.615850e-47 |
| Msa0213430 | Msa0813260 | 0.821657 | 3.594396e-53 | -8.615850e-47 |
| Msa0235880 | Msa0813260 | 0.850115 | 2.091382e-60 | -8.615850e-47 |
| Msa0364790 | Msa0813260 | 0.804333 | 2.271306e-49 | -8.615850e-47 |
| Msa0380600 | Msa0813260 | 0.811030 | 8.585218e-51 | -8.615850e-47 |
| Msa0382370 | Msa0813260 | 0.821015 | 5.052787e-53 | -8.615850e-47 |
| Msa0394470 | Msa0813260 | 0.812569 | 3.969925e-51 | -8.615850e-47 |
| Msa0418400 | Msa0813260 | 0.867718 | 1.113122e-65 | -8.615850e-47 |
| Msa0430240 | Msa0813260 | 0.809496 | 1.839131e-50 | -8.615850e-47 |
| Msa0432160 | Msa0813260 | 0.814752 | 1.313073e-51 | -8.615850e-47 |
| Msa0437070 | Msa0813260 | 0.823217 | 1.559819e-53 | -8.615850e-47 |
| Msa0472710 | Msa0813260 | 0.866097 | 3.658160e-65 | -8.615850e-47 |
| Msa0472720 | Msa0813260 | 0.841364 | 4.970819e-58 | -8.615850e-47 |
| Msa0472760 | Msa0813260 | 0.805385 | 1.369616e-49 | -8.615850e-47 |
| Msa0472770 | Msa0813260 | 0.869990 | 2.045222e-66 | -8.615850e-47 |
| Msa0476680 | Msa0813260 | 0.807188 | 5.710891e-50 | -8.615850e-47 |
| Msa0482180 | Msa0813260 | 0.829937 | 3.892276e-55 | -8.615850e-47 |
| Msa0239060 | Msa0813260 | 0.804481 | 2.116360e-49 | -8.615850e-47 |
| Msa0240270 | Msa0813260 | 0.831571 | 1.548294e-55 | -8.615850e-47 |
| Msa0245540 | Msa0813260 | 0.806631 | 7.491197e-50 | -8.615850e-47 |
| Msa0282720 | Msa0813260 | 0.845909 | 3.026716e-59 | -8.615850e-47 |
| Msa0284450 | Msa0813260 | 0.805489 | 1.302106e-49 | -8.615850e-47 |
| Msa0305620 | Msa0813260 | 0.832374 | 9.802061e-56 | -8.615850e-47 |
| Msa0312910 | Msa0813260 | 0.810161 | 1.322655e-50 | -8.615850e-47 |
| Msa0347750 | Msa0813260 | 0.839891 | 1.207964e-57 | -8.615850e-47 |
| Msa0358110 | Msa0813260 | 0.862918 | 3.605071e-64 | -8.615850e-47 |
| Msa0358120 | Msa0813260 | 0.844240 | 8.544683e-59 | -8.615850e-47 |
| Msa0482940 | Msa0813260 | 0.823102 | 1.659018e-53 | -8.615850e-47 |
| Msa0485490 | Msa0813260 | 0.816416 | 5.593220e-52 | -8.615850e-47 |
| Msa0514610 | Msa0813260 | 0.828423 | 9.065267e-55 | -8.615850e-47 |
| Msa0517610 | Msa0813260 | 0.802582 | 5.239859e-49 | -8.615850e-47 |
| Msa0521010 | Msa0813260 | 0.805869 | 1.084068e-49 | -8.615850e-47 |
| Msa0583670 | Msa0813260 | 0.837015 | 6.668749e-57 | -8.615850e-47 |
| Msa0599150 | Msa0813260 | 0.805899 | 1.068330e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813260 | MtrunA17_Chr5g0430481 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 774 |
| Msa0813260 | MtrunA17_Chr3g0105371 | 62.895 | 380 | 101 | 4 | 1 | 378 | 1 | 342 | 9.54e-164 | 462 |
| Msa0813260 | MtrunA17_Chr3g0105351 | 74.150 | 294 | 74 | 2 | 87 | 378 | 25 | 318 | 2.23e-163 | 460 |
| Msa0813260 | MtrunA17_Chr1g0150451 | 40.000 | 255 | 140 | 4 | 124 | 374 | 78 | 323 | 4.32e-55 | 184 |
| Msa0813260 | MtrunA17_Chr3g0136711 | 39.216 | 255 | 142 | 4 | 124 | 374 | 35 | 280 | 5.98e-54 | 180 |
| Msa0813260 | MtrunA17_Chr1g0212961 | 38.672 | 256 | 138 | 7 | 123 | 374 | 97 | 337 | 3.39e-53 | 179 |
| Msa0813260 | MtrunA17_Chr3g0126511 | 38.372 | 258 | 144 | 5 | 123 | 376 | 96 | 342 | 4.06e-50 | 172 |
| Msa0813260 | MtrunA17_Chr5g0426141 | 38.996 | 259 | 140 | 10 | 124 | 375 | 35 | 282 | 2.28e-45 | 157 |
| Msa0813260 | MtrunA17_Chr4g0065141 | 36.330 | 267 | 134 | 7 | 131 | 372 | 93 | 348 | 4.63e-45 | 159 |
| Msa0813260 | MtrunA17_Chr3g0115851 | 37.984 | 258 | 144 | 8 | 124 | 375 | 35 | 282 | 5.48e-44 | 154 |
| Msa0813260 | MtrunA17_Chr4g0070871 | 38.189 | 254 | 123 | 6 | 154 | 375 | 253 | 504 | 1.88e-43 | 157 |
| Msa0813260 | MtrunA17_Chr2g0317021 | 39.147 | 258 | 141 | 8 | 124 | 375 | 86 | 333 | 3.24e-43 | 153 |
| Msa0813260 | MtrunA17_Chr4g0050381 | 37.931 | 261 | 140 | 11 | 124 | 375 | 30 | 277 | 5.41e-43 | 150 |
| Msa0813260 | MtrunA17_Chr8g0360351 | 38.521 | 257 | 142 | 7 | 124 | 374 | 35 | 281 | 1.59e-41 | 147 |
| Msa0813260 | MtrunA17_Chr2g0279151 | 38.710 | 248 | 131 | 8 | 136 | 375 | 47 | 281 | 1.80e-39 | 142 |
| Msa0813260 | MtrunA17_Chr3g0112291 | 31.988 | 347 | 187 | 9 | 64 | 376 | 46 | 377 | 8.16e-39 | 142 |
| Msa0813260 | MtrunA17_Chr3g0138281 | 35.849 | 265 | 136 | 7 | 131 | 372 | 90 | 343 | 3.28e-38 | 140 |
| Msa0813260 | MtrunA17_Chr1g0171571 | 33.083 | 266 | 156 | 4 | 124 | 375 | 388 | 645 | 3.82e-38 | 145 |
| Msa0813260 | MtrunA17_Chr2g0299981 | 31.949 | 313 | 141 | 9 | 131 | 375 | 228 | 536 | 6.58e-37 | 140 |
| Msa0813260 | MtrunA17_Chr2g0293811 | 32.932 | 249 | 144 | 5 | 143 | 374 | 89 | 331 | 1.60e-36 | 136 |
| Msa0813260 | MtrunA17_Chr4g0051661 | 38.589 | 241 | 134 | 8 | 136 | 372 | 165 | 395 | 2.32e-36 | 136 |
| Msa0813260 | MtrunA17_Chr3g0135961 | 33.969 | 262 | 136 | 7 | 149 | 375 | 281 | 540 | 8.70e-36 | 137 |
| Msa0813260 | MtrunA17_Chr5g0407161 | 32.950 | 261 | 150 | 7 | 129 | 372 | 91 | 343 | 3.82e-35 | 132 |
| Msa0813260 | MtrunA17_Chr1g0150781 | 31.915 | 329 | 158 | 10 | 107 | 375 | 222 | 544 | 1.11e-34 | 134 |
| Msa0813260 | MtrunA17_Chr1g0158781 | 37.405 | 262 | 146 | 6 | 131 | 375 | 120 | 380 | 1.32e-34 | 131 |
| Msa0813260 | MtrunA17_Chr5g0435721 | 36.709 | 237 | 130 | 5 | 124 | 343 | 193 | 426 | 3.26e-34 | 132 |
| Msa0813260 | MtrunA17_Chr1g0194191 | 31.136 | 273 | 157 | 7 | 127 | 374 | 83 | 349 | 4.70e-33 | 127 |
| Msa0813260 | MtrunA17_Chr3g0144111 | 34.513 | 226 | 116 | 5 | 153 | 372 | 26 | 225 | 6.06e-33 | 124 |
| Msa0813260 | MtrunA17_Chr7g0263281 | 34.978 | 223 | 103 | 6 | 154 | 335 | 71 | 292 | 1.51e-32 | 125 |
| Msa0813260 | MtrunA17_Chr8g0389921 | 34.440 | 241 | 140 | 5 | 152 | 375 | 196 | 435 | 1.22e-31 | 124 |
| Msa0813260 | MtrunA17_Chr1g0150071 | 31.884 | 276 | 116 | 9 | 124 | 337 | 24 | 289 | 1.25e-30 | 120 |
| Msa0813260 | MtrunA17_Chr3g0136811 | 30.935 | 278 | 121 | 9 | 124 | 339 | 24 | 292 | 1.20e-29 | 117 |
| Msa0813260 | MtrunA17_Chr1g0213351 | 31.119 | 286 | 139 | 10 | 145 | 374 | 71 | 354 | 2.15e-28 | 114 |
| Msa0813260 | MtrunA17_Chr3g0127091 | 30.137 | 292 | 148 | 10 | 130 | 374 | 67 | 349 | 4.22e-28 | 113 |
| Msa0813260 | MtrunA17_Chr1g0181901 | 32.287 | 223 | 109 | 6 | 154 | 335 | 76 | 297 | 9.97e-28 | 112 |
| Msa0813260 | MtrunA17_Chr4g0001761 | 29.779 | 272 | 121 | 8 | 124 | 334 | 24 | 286 | 1.22e-27 | 112 |
| Msa0813260 | MtrunA17_Chr5g0396731 | 32.847 | 274 | 151 | 7 | 131 | 374 | 80 | 350 | 9.74e-27 | 109 |
| Msa0813260 | MtrunA17_Chr7g0256751 | 34.426 | 244 | 115 | 8 | 134 | 336 | 52 | 291 | 2.70e-26 | 109 |
| Msa0813260 | MtrunA17_Chr1g0211251 | 31.250 | 224 | 112 | 6 | 154 | 336 | 81 | 303 | 7.97e-26 | 107 |
| Msa0813260 | MtrunA17_Chr2g0286951 | 29.801 | 302 | 151 | 13 | 124 | 375 | 52 | 342 | 6.61e-25 | 105 |
| Msa0813260 | MtrunA17_Chr1g0175381 | 29.391 | 279 | 140 | 9 | 153 | 376 | 78 | 354 | 1.09e-24 | 103 |
| Msa0813260 | MtrunA17_Chr3g0089721 | 32.510 | 243 | 119 | 9 | 136 | 337 | 53 | 291 | 1.33e-24 | 103 |
| Msa0813260 | MtrunA17_Chr4g0066371 | 28.873 | 284 | 146 | 11 | 137 | 375 | 69 | 341 | 1.44e-24 | 103 |
| Msa0813260 | MtrunA17_Chr3g0089711 | 32.099 | 243 | 120 | 9 | 136 | 337 | 53 | 291 | 2.85e-24 | 102 |
| Msa0813260 | MtrunA17_Chr7g0256771 | 31.939 | 263 | 124 | 10 | 134 | 353 | 53 | 303 | 3.73e-24 | 101 |
| Msa0813260 | MtrunA17_Chr1g0207571 | 30.568 | 229 | 113 | 6 | 154 | 338 | 61 | 287 | 1.07e-23 | 101 |
| Msa0813260 | MtrunA17_Chr7g0250061 | 30.804 | 224 | 113 | 8 | 154 | 336 | 76 | 298 | 1.38e-23 | 100 |
| Msa0813260 | MtrunA17_Chr7g0271971 | 29.555 | 247 | 145 | 8 | 148 | 374 | 60 | 297 | 4.48e-23 | 100 |
| Msa0813260 | MtrunA17_Chr8g0371321 | 29.464 | 224 | 116 | 6 | 154 | 336 | 79 | 301 | 2.90e-22 | 97.1 |
| Msa0813260 | MtrunA17_Chr6g0483411 | 29.237 | 236 | 137 | 7 | 130 | 338 | 51 | 283 | 3.87e-22 | 95.9 |
| Msa0813260 | MtrunA17_Chr2g0294291 | 29.333 | 225 | 118 | 6 | 154 | 337 | 75 | 299 | 6.47e-21 | 93.2 |
| Msa0813260 | MtrunA17_Chr1g0192471 | 27.007 | 274 | 168 | 10 | 124 | 374 | 33 | 297 | 3.25e-20 | 91.7 |
| Msa0813260 | MtrunA17_Chr4g0004971 | 29.020 | 255 | 135 | 9 | 125 | 334 | 49 | 302 | 8.24e-20 | 89.7 |
| Msa0813260 | MtrunA17_Chr1g0209451 | 25.461 | 271 | 173 | 7 | 123 | 374 | 37 | 297 | 1.15e-19 | 90.1 |
| Msa0813260 | MtrunA17_Chr7g0225501 | 30.645 | 248 | 145 | 10 | 148 | 374 | 78 | 319 | 3.90e-19 | 88.6 |
| Msa0813260 | MtrunA17_Chr3g0133801 | 27.572 | 243 | 153 | 9 | 148 | 374 | 60 | 295 | 1.32e-18 | 87.0 |
| Msa0813260 | MtrunA17_Chr1g0153671 | 27.984 | 243 | 152 | 9 | 148 | 374 | 59 | 294 | 1.87e-18 | 86.3 |
| Msa0813260 | MtrunA17_Chr4g0063111 | 31.698 | 265 | 129 | 14 | 136 | 362 | 60 | 310 | 9.85e-17 | 81.6 |
| Msa0813260 | MtrunA17_Chr6g0486661 | 28.625 | 269 | 139 | 10 | 151 | 374 | 121 | 381 | 3.49e-16 | 80.5 |
| Msa0813260 | MtrunA17_Chr7g0243571 | 27.481 | 262 | 137 | 10 | 125 | 334 | 63 | 323 | 4.77e-16 | 79.3 |
| Msa0813260 | MtrunA17_Chr1g0192421 | 27.852 | 298 | 172 | 12 | 117 | 372 | 52 | 348 | 1.08e-15 | 77.4 |
| Msa0813260 | MtrunA17_Chr4g0067711 | 27.273 | 264 | 144 | 11 | 116 | 334 | 51 | 311 | 1.88e-15 | 77.0 |
| Msa0813260 | MtrunA17_Chr7g0272061 | 27.184 | 309 | 173 | 13 | 117 | 374 | 54 | 361 | 2.43e-15 | 76.6 |
| Msa0813260 | MtrunA17_Chr2g0295401 | 25.087 | 287 | 172 | 12 | 126 | 370 | 64 | 349 | 9.36e-15 | 74.7 |
| Msa0813260 | MtrunA17_Chr3g0089691 | 30.570 | 193 | 93 | 7 | 186 | 337 | 13 | 205 | 1.72e-14 | 73.6 |
| Msa0813260 | MtrunA17_Chr1g0185141 | 25.820 | 244 | 124 | 8 | 190 | 377 | 199 | 441 | 7.44e-14 | 73.2 |
| Msa0813260 | MtrunA17_Chr7g0221691 | 26.568 | 271 | 136 | 10 | 125 | 334 | 100 | 368 | 9.26e-14 | 72.4 |
| Msa0813260 | MtrunA17_Chr1g0151781 | 30.159 | 252 | 132 | 11 | 125 | 335 | 40 | 288 | 2.07e-13 | 70.9 |
| Msa0813260 | MtrunA17_Chr7g0249421 | 25.540 | 278 | 138 | 10 | 125 | 334 | 67 | 343 | 8.53e-12 | 66.6 |
| Msa0813260 | MtrunA17_Chr2g0324061 | 27.863 | 262 | 134 | 10 | 126 | 334 | 63 | 322 | 1.02e-11 | 66.2 |
| Msa0813260 | MtrunA17_Chr1g0187481 | 24.348 | 230 | 144 | 6 | 149 | 374 | 74 | 277 | 1.51e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0813260 | AT1G07160.1 | 62.468 | 389 | 122 | 7 | 1 | 376 | 1 | 378 | 1.35e-159 | 453 |
| Msa0813260 | AT2G30020.1 | 61.194 | 402 | 126 | 7 | 1 | 378 | 1 | 396 | 4.00e-157 | 447 |
| Msa0813260 | AT2G40180.1 | 60.635 | 315 | 110 | 6 | 76 | 378 | 77 | 389 | 4.14e-125 | 366 |
| Msa0813260 | AT1G67820.1 | 46.417 | 321 | 144 | 6 | 37 | 332 | 13 | 330 | 1.07e-84 | 265 |
| Msa0813260 | AT1G67820.2 | 46.965 | 313 | 129 | 7 | 34 | 332 | 5 | 294 | 3.17e-84 | 262 |
| Msa0813260 | AT4G08260.1 | 52.459 | 244 | 83 | 4 | 136 | 378 | 1 | 212 | 2.35e-77 | 238 |
| Msa0813260 | AT3G27140.1 | 48.963 | 241 | 70 | 3 | 136 | 375 | 1 | 189 | 8.34e-65 | 207 |
| Msa0813260 | AT2G05050.1 | 44.262 | 244 | 84 | 4 | 136 | 378 | 1 | 193 | 2.16e-57 | 186 |
| Msa0813260 | AT4G31750.2 | 40.000 | 255 | 140 | 4 | 124 | 374 | 34 | 279 | 7.62e-55 | 183 |
| Msa0813260 | AT4G31750.1 | 40.000 | 255 | 140 | 4 | 124 | 374 | 34 | 279 | 8.25e-55 | 183 |
| Msa0813260 | AT4G31750.3 | 40.000 | 255 | 140 | 4 | 124 | 374 | 34 | 279 | 8.25e-55 | 183 |
| Msa0813260 | AT5G10740.1 | 39.608 | 255 | 141 | 4 | 124 | 374 | 34 | 279 | 2.06e-54 | 183 |
| Msa0813260 | AT5G10740.2 | 39.608 | 255 | 141 | 4 | 124 | 374 | 34 | 279 | 2.06e-54 | 183 |
| Msa0813260 | AT5G53140.1 | 39.216 | 255 | 141 | 6 | 127 | 376 | 104 | 349 | 3.44e-54 | 184 |
| Msa0813260 | AT5G53140.2 | 39.216 | 255 | 141 | 6 | 127 | 376 | 104 | 349 | 3.44e-54 | 184 |
| Msa0813260 | AT5G24940.1 | 38.824 | 255 | 143 | 4 | 124 | 374 | 34 | 279 | 1.08e-53 | 184 |
| Msa0813260 | AT1G43900.1 | 38.996 | 259 | 138 | 7 | 123 | 375 | 125 | 369 | 1.71e-52 | 179 |
| Msa0813260 | AT4G28400.3 | 36.965 | 257 | 146 | 7 | 124 | 374 | 14 | 260 | 1.31e-44 | 155 |
| Msa0813260 | AT4G28400.1 | 36.965 | 257 | 146 | 7 | 124 | 374 | 36 | 282 | 1.68e-44 | 155 |
| Msa0813260 | AT3G15260.2 | 41.633 | 245 | 128 | 7 | 136 | 375 | 55 | 289 | 1.69e-44 | 155 |
| Msa0813260 | AT3G15260.1 | 41.633 | 245 | 128 | 7 | 136 | 375 | 55 | 289 | 1.69e-44 | 155 |
| Msa0813260 | AT1G78200.5 | 37.500 | 248 | 137 | 7 | 136 | 375 | 1 | 238 | 3.54e-43 | 150 |
| Msa0813260 | AT1G78200.4 | 37.500 | 248 | 137 | 7 | 136 | 375 | 1 | 238 | 3.54e-43 | 150 |
| Msa0813260 | AT1G78200.1 | 36.364 | 264 | 149 | 8 | 121 | 375 | 30 | 283 | 7.34e-43 | 151 |
| Msa0813260 | AT1G78200.3 | 36.364 | 264 | 149 | 8 | 121 | 375 | 30 | 283 | 7.34e-43 | 151 |
| Msa0813260 | AT1G78200.2 | 36.364 | 264 | 149 | 8 | 121 | 375 | 30 | 283 | 7.34e-43 | 151 |
| Msa0813260 | AT2G20630.1 | 36.327 | 245 | 141 | 6 | 136 | 375 | 45 | 279 | 1.46e-42 | 150 |
| Msa0813260 | AT2G20630.2 | 36.929 | 241 | 137 | 6 | 136 | 371 | 45 | 275 | 1.70e-41 | 147 |
| Msa0813260 | AT1G34750.2 | 38.224 | 259 | 142 | 9 | 123 | 375 | 36 | 282 | 3.48e-41 | 146 |
| Msa0813260 | AT1G34750.1 | 38.224 | 259 | 142 | 9 | 123 | 375 | 36 | 282 | 3.48e-41 | 146 |
| Msa0813260 | AT1G34750.3 | 38.224 | 259 | 142 | 9 | 123 | 375 | 36 | 282 | 3.48e-41 | 146 |
| Msa0813260 | AT5G51760.2 | 34.202 | 307 | 146 | 8 | 124 | 376 | 79 | 383 | 8.19e-40 | 145 |
| Msa0813260 | AT5G51760.1 | 34.202 | 307 | 146 | 8 | 124 | 376 | 109 | 413 | 1.32e-39 | 145 |
| Msa0813260 | AT2G29380.1 | 36.585 | 287 | 144 | 10 | 123 | 375 | 79 | 361 | 2.13e-39 | 144 |
| Msa0813260 | AT2G25620.1 | 32.203 | 295 | 154 | 7 | 105 | 375 | 85 | 357 | 2.72e-39 | 144 |
| Msa0813260 | AT2G25620.2 | 32.203 | 295 | 154 | 7 | 105 | 375 | 85 | 357 | 2.72e-39 | 144 |
| Msa0813260 | AT2G33700.1 | 34.483 | 261 | 146 | 6 | 129 | 372 | 90 | 342 | 3.92e-39 | 144 |
| Msa0813260 | AT1G22280.3 | 34.601 | 263 | 152 | 10 | 124 | 375 | 34 | 287 | 6.78e-39 | 140 |
| Msa0813260 | AT5G57050.2 | 33.007 | 306 | 145 | 8 | 124 | 375 | 73 | 372 | 1.48e-38 | 142 |
| Msa0813260 | AT5G57050.1 | 33.660 | 306 | 143 | 9 | 124 | 375 | 113 | 412 | 1.65e-38 | 143 |
| Msa0813260 | AT4G26080.1 | 32.333 | 300 | 150 | 8 | 123 | 375 | 130 | 423 | 2.79e-38 | 142 |
| Msa0813260 | AT1G22280.1 | 34.749 | 259 | 151 | 10 | 124 | 375 | 34 | 281 | 1.11e-37 | 137 |
| Msa0813260 | AT1G72770.4 | 34.586 | 266 | 129 | 6 | 154 | 375 | 238 | 502 | 1.54e-36 | 139 |
| Msa0813260 | AT1G72770.1 | 34.586 | 266 | 129 | 6 | 154 | 375 | 238 | 502 | 1.54e-36 | 139 |
| Msa0813260 | AT1G72770.3 | 34.586 | 266 | 129 | 6 | 154 | 375 | 238 | 502 | 1.54e-36 | 139 |
| Msa0813260 | AT1G17550.1 | 34.831 | 267 | 128 | 7 | 154 | 375 | 237 | 502 | 1.85e-36 | 139 |
| Msa0813260 | AT1G17550.2 | 34.831 | 267 | 128 | 7 | 154 | 375 | 237 | 502 | 1.85e-36 | 139 |
| Msa0813260 | AT2G40860.1 | 32.692 | 260 | 150 | 5 | 131 | 375 | 400 | 649 | 2.66e-36 | 140 |
| Msa0813260 | AT2G40860.4 | 32.692 | 260 | 150 | 5 | 131 | 375 | 302 | 551 | 2.79e-36 | 139 |
| Msa0813260 | AT4G28400.2 | 37.198 | 207 | 120 | 6 | 124 | 324 | 36 | 238 | 2.04e-34 | 128 |
| Msa0813260 | AT2G34740.1 | 34.274 | 248 | 148 | 8 | 136 | 378 | 101 | 338 | 3.11e-34 | 129 |
| Msa0813260 | AT3G51470.1 | 31.801 | 261 | 152 | 8 | 127 | 372 | 76 | 325 | 5.15e-34 | 129 |
| Msa0813260 | AT3G51470.2 | 31.418 | 261 | 153 | 7 | 127 | 372 | 32 | 281 | 5.77e-34 | 128 |
| Msa0813260 | AT1G48040.1 | 33.835 | 266 | 144 | 7 | 133 | 372 | 88 | 347 | 8.45e-34 | 129 |
| Msa0813260 | AT3G11410.1 | 36.052 | 233 | 121 | 4 | 131 | 336 | 112 | 343 | 5.83e-33 | 127 |
| Msa0813260 | AT2G40860.2 | 32.520 | 246 | 141 | 5 | 131 | 361 | 400 | 635 | 1.70e-32 | 129 |
| Msa0813260 | AT1G07430.1 | 34.746 | 236 | 130 | 5 | 124 | 336 | 121 | 355 | 2.47e-32 | 126 |
| Msa0813260 | AT5G59220.1 | 34.694 | 245 | 135 | 4 | 124 | 346 | 112 | 353 | 3.09e-31 | 123 |
| Msa0813260 | AT1G34750.4 | 39.151 | 212 | 116 | 9 | 123 | 328 | 36 | 240 | 1.95e-29 | 114 |
| Msa0813260 | AT2G34740.2 | 37.438 | 203 | 111 | 8 | 136 | 330 | 115 | 309 | 3.45e-29 | 115 |
| Msa0813260 | AT2G34740.3 | 37.000 | 200 | 116 | 7 | 136 | 330 | 97 | 291 | 3.47e-29 | 115 |
| Msa0813260 | AT5G02760.1 | 32.127 | 221 | 110 | 6 | 154 | 335 | 72 | 291 | 1.04e-28 | 115 |
| Msa0813260 | AT3G17250.1 | 28.159 | 277 | 162 | 8 | 127 | 372 | 121 | 391 | 1.80e-28 | 115 |
| Msa0813260 | AT3G62260.3 | 30.802 | 237 | 142 | 5 | 153 | 372 | 26 | 257 | 1.87e-28 | 113 |
| Msa0813260 | AT3G62260.1 | 30.802 | 237 | 142 | 5 | 153 | 372 | 115 | 346 | 3.45e-28 | 114 |
| Msa0813260 | AT3G62260.2 | 30.802 | 237 | 142 | 5 | 153 | 372 | 116 | 347 | 3.46e-28 | 114 |
| Msa0813260 | AT3G55050.1 | 34.821 | 224 | 102 | 7 | 154 | 335 | 84 | 305 | 4.91e-28 | 114 |
| Msa0813260 | AT3G55050.2 | 34.821 | 224 | 102 | 7 | 154 | 335 | 84 | 305 | 4.91e-28 | 114 |
| Msa0813260 | AT4G31860.1 | 27.900 | 319 | 153 | 10 | 124 | 376 | 24 | 331 | 9.02e-28 | 112 |
| Msa0813260 | AT4G31860.3 | 29.818 | 275 | 123 | 8 | 124 | 337 | 24 | 289 | 1.13e-27 | 110 |
| Msa0813260 | AT4G33920.1 | 30.357 | 280 | 134 | 9 | 154 | 374 | 61 | 338 | 2.67e-27 | 111 |
| Msa0813260 | AT3G12620.2 | 33.186 | 226 | 101 | 6 | 154 | 334 | 83 | 303 | 3.19e-27 | 111 |
| Msa0813260 | AT3G12620.1 | 33.186 | 226 | 101 | 6 | 154 | 334 | 83 | 303 | 3.19e-27 | 111 |
| Msa0813260 | AT1G18030.1 | 32.203 | 236 | 130 | 8 | 130 | 338 | 81 | 313 | 1.06e-26 | 109 |
| Msa0813260 | AT2G25070.1 | 30.403 | 273 | 124 | 7 | 124 | 337 | 24 | 289 | 1.34e-26 | 109 |
| Msa0813260 | AT2G25070.2 | 30.403 | 273 | 124 | 7 | 124 | 337 | 24 | 289 | 1.34e-26 | 109 |
| Msa0813260 | AT5G06750.3 | 32.759 | 232 | 107 | 7 | 150 | 335 | 78 | 306 | 2.51e-26 | 108 |
| Msa0813260 | AT5G06750.1 | 32.759 | 232 | 107 | 7 | 150 | 335 | 78 | 306 | 2.51e-26 | 108 |
| Msa0813260 | AT1G18030.2 | 33.333 | 222 | 118 | 8 | 130 | 324 | 81 | 299 | 2.74e-26 | 107 |
| Msa0813260 | AT4G38520.2 | 34.081 | 223 | 107 | 8 | 154 | 336 | 81 | 303 | 1.28e-25 | 107 |
| Msa0813260 | AT4G38520.1 | 34.081 | 223 | 107 | 8 | 154 | 336 | 81 | 303 | 1.28e-25 | 107 |
| Msa0813260 | AT4G31860.2 | 30.268 | 261 | 112 | 8 | 124 | 323 | 24 | 275 | 3.69e-25 | 103 |
| Msa0813260 | AT3G51370.1 | 30.804 | 224 | 113 | 6 | 154 | 336 | 79 | 301 | 7.83e-25 | 104 |
| Msa0813260 | AT3G51370.3 | 30.804 | 224 | 113 | 6 | 154 | 336 | 79 | 301 | 7.83e-25 | 104 |
| Msa0813260 | AT5G66080.1 | 32.287 | 223 | 111 | 6 | 154 | 336 | 82 | 304 | 3.81e-24 | 102 |
| Msa0813260 | AT2G40860.3 | 32.338 | 201 | 116 | 4 | 131 | 316 | 400 | 595 | 1.50e-23 | 102 |
| Msa0813260 | AT4G33920.2 | 30.992 | 242 | 107 | 8 | 192 | 374 | 15 | 255 | 1.64e-23 | 99.8 |
| Msa0813260 | AT4G33920.3 | 32.701 | 211 | 92 | 6 | 213 | 374 | 16 | 225 | 8.48e-23 | 97.1 |
| Msa0813260 | AT3G06270.1 | 26.087 | 299 | 166 | 11 | 124 | 375 | 53 | 343 | 2.23e-21 | 94.4 |
| Msa0813260 | AT1G09160.2 | 28.870 | 239 | 147 | 9 | 152 | 374 | 66 | 297 | 4.11e-21 | 94.7 |
| Msa0813260 | AT1G09160.1 | 28.870 | 239 | 147 | 9 | 152 | 374 | 66 | 297 | 4.11e-21 | 94.7 |
| Msa0813260 | AT5G06750.2 | 32.984 | 191 | 84 | 5 | 191 | 337 | 36 | 226 | 1.27e-20 | 91.7 |
| Msa0813260 | AT1G47380.1 | 28.980 | 245 | 147 | 10 | 148 | 374 | 58 | 293 | 1.51e-20 | 93.2 |
| Msa0813260 | AT3G17090.2 | 28.700 | 223 | 119 | 7 | 154 | 336 | 84 | 306 | 1.89e-20 | 91.3 |
| Msa0813260 | AT4G27800.1 | 27.835 | 291 | 156 | 10 | 130 | 374 | 66 | 348 | 2.11e-20 | 92.0 |
| Msa0813260 | AT3G17090.1 | 26.715 | 277 | 149 | 9 | 154 | 376 | 84 | 360 | 2.26e-20 | 92.0 |
| Msa0813260 | AT3G51370.2 | 34.839 | 155 | 70 | 3 | 213 | 336 | 62 | 216 | 5.75e-20 | 89.7 |
| Msa0813260 | AT5G57050.3 | 33.831 | 201 | 93 | 7 | 124 | 290 | 113 | 307 | 8.03e-20 | 89.4 |
| Msa0813260 | AT5G66080.2 | 33.520 | 179 | 85 | 5 | 192 | 336 | 22 | 200 | 6.11e-19 | 86.3 |
| Msa0813260 | AT3G63320.1 | 26.518 | 313 | 135 | 10 | 156 | 375 | 71 | 381 | 9.59e-19 | 87.8 |
| Msa0813260 | AT1G68410.4 | 26.360 | 239 | 153 | 8 | 152 | 374 | 71 | 302 | 1.06e-18 | 87.8 |
| Msa0813260 | AT1G68410.3 | 26.360 | 239 | 153 | 8 | 152 | 374 | 71 | 302 | 1.06e-18 | 87.8 |
| Msa0813260 | AT1G68410.1 | 26.360 | 239 | 153 | 8 | 152 | 374 | 71 | 302 | 1.06e-18 | 87.8 |
| Msa0813260 | AT1G68410.2 | 26.360 | 239 | 153 | 8 | 152 | 374 | 71 | 302 | 1.06e-18 | 87.8 |
| Msa0813260 | AT5G27930.1 | 29.605 | 304 | 160 | 14 | 117 | 372 | 55 | 352 | 1.48e-18 | 86.7 |
| Msa0813260 | AT5G27930.2 | 29.605 | 304 | 160 | 14 | 117 | 372 | 55 | 352 | 1.48e-18 | 86.7 |
| Msa0813260 | AT3G63340.12 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 1.60e-18 | 87.4 |
| Msa0813260 | AT3G63340.11 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 2.82e-18 | 87.0 |
| Msa0813260 | AT3G63320.2 | 28.571 | 245 | 116 | 8 | 188 | 375 | 56 | 298 | 3.09e-18 | 85.5 |
| Msa0813260 | AT3G63340.8 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 3.18e-18 | 87.0 |
| Msa0813260 | AT3G63340.5 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 3.30e-18 | 87.0 |
| Msa0813260 | AT3G63340.1 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 3.30e-18 | 87.0 |
| Msa0813260 | AT3G63340.6 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 3.32e-18 | 87.0 |
| Msa0813260 | AT3G63340.3 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 3.32e-18 | 87.0 |
| Msa0813260 | AT3G63340.10 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 3.32e-18 | 87.0 |
| Msa0813260 | AT3G63340.4 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 3.32e-18 | 87.0 |
| Msa0813260 | AT3G63340.7 | 29.084 | 251 | 107 | 9 | 188 | 375 | 204 | 446 | 3.39e-18 | 87.0 |
| Msa0813260 | AT2G20050.1 | 29.278 | 263 | 136 | 12 | 154 | 374 | 143 | 397 | 4.87e-18 | 86.7 |
| Msa0813260 | AT2G20050.2 | 29.278 | 263 | 136 | 12 | 154 | 374 | 143 | 397 | 4.96e-18 | 86.7 |
| Msa0813260 | AT3G16800.2 | 29.600 | 250 | 134 | 10 | 125 | 336 | 64 | 309 | 6.50e-17 | 81.6 |
| Msa0813260 | AT3G16800.1 | 29.600 | 250 | 134 | 10 | 125 | 336 | 64 | 309 | 6.50e-17 | 81.6 |
| Msa0813260 | AT3G16800.3 | 29.600 | 250 | 134 | 10 | 125 | 336 | 64 | 309 | 6.50e-17 | 81.6 |
| Msa0813260 | AT1G72770.2 | 32.727 | 165 | 81 | 3 | 154 | 289 | 238 | 401 | 8.78e-17 | 81.6 |
| Msa0813260 | AT1G72770.5 | 32.727 | 165 | 81 | 3 | 154 | 289 | 238 | 401 | 8.78e-17 | 81.6 |
| Msa0813260 | AT5G01700.1 | 27.304 | 293 | 162 | 11 | 129 | 376 | 4 | 290 | 1.14e-16 | 80.5 |
| Msa0813260 | AT5G59220.2 | 31.915 | 188 | 103 | 4 | 124 | 289 | 112 | 296 | 2.36e-16 | 79.3 |
| Msa0813260 | AT5G01700.2 | 27.273 | 297 | 165 | 11 | 125 | 376 | 49 | 339 | 3.13e-16 | 79.7 |
| Msa0813260 | AT3G16800.4 | 38.298 | 141 | 69 | 6 | 213 | 336 | 75 | 214 | 8.10e-16 | 77.0 |
| Msa0813260 | AT3G16800.6 | 38.298 | 141 | 69 | 6 | 213 | 336 | 75 | 214 | 8.10e-16 | 77.0 |
| Msa0813260 | AT3G63340.2 | 35.570 | 149 | 72 | 6 | 243 | 375 | 339 | 479 | 1.25e-15 | 79.3 |
| Msa0813260 | AT3G05640.2 | 27.148 | 291 | 162 | 14 | 125 | 372 | 64 | 347 | 2.57e-14 | 73.9 |
| Msa0813260 | AT3G05640.1 | 27.148 | 291 | 162 | 14 | 125 | 372 | 64 | 347 | 2.57e-14 | 73.9 |
| Msa0813260 | AT3G05640.3 | 27.148 | 291 | 162 | 14 | 125 | 372 | 64 | 347 | 2.57e-14 | 73.9 |
| Msa0813260 | AT1G22280.2 | 33.553 | 152 | 90 | 8 | 124 | 269 | 34 | 180 | 1.05e-13 | 69.7 |
| Msa0813260 | AT4G32950.1 | 31.308 | 214 | 112 | 12 | 153 | 337 | 71 | 278 | 4.04e-13 | 70.1 |
| Msa0813260 | AT5G19280.1 | 30.263 | 228 | 133 | 9 | 131 | 338 | 318 | 539 | 4.60e-13 | 70.9 |
| Msa0813260 | AT3G16560.1 | 23.962 | 313 | 149 | 10 | 149 | 374 | 170 | 480 | 5.57e-13 | 70.5 |
| Msa0813260 | AT3G16560.4 | 23.962 | 313 | 149 | 10 | 149 | 374 | 170 | 480 | 5.57e-13 | 70.5 |
| Msa0813260 | AT3G16560.2 | 23.962 | 313 | 149 | 10 | 149 | 374 | 170 | 480 | 5.57e-13 | 70.5 |
| Msa0813260 | AT3G16560.3 | 25.373 | 268 | 129 | 8 | 149 | 347 | 170 | 435 | 8.63e-13 | 69.7 |
| Msa0813260 | AT5G19280.2 | 28.992 | 238 | 133 | 10 | 131 | 338 | 318 | 549 | 8.68e-11 | 63.9 |
Find 95 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAAATGATGACATTTAT+TGG | 0.132356 | 5_3:+43821907 | Msa0813260:three_prime_UTR |
| TATAGATTATCTAATTATTT+TGG | 0.174941 | 5_3:+43822026 | Msa0813260:three_prime_UTR |
| TATTAGCTTCAGATGGATTA+TGG | 0.192944 | 5_3:+43821392 | Msa0813260:CDS |
| TTTACGTCAAACAAAGATTC+TGG | 0.235726 | 5_3:+43819905 | Msa0813260:CDS |
| TCTTCGTGGTGAAAACAATT+TGG | 0.251614 | 5_3:+43820126 | Msa0813260:CDS |
| GAGAGGGAGGAGGGAGTATA+TGG | 0.257999 | 5_3:+43820078 | Msa0813260:CDS |
| GTCTGTTTCAAGAGGCTCTT+TGG | 0.279836 | 5_3:+43821746 | Msa0813260:CDS |
| CTAGTAAACAAATGGCTAAA+TGG | 0.283175 | 5_3:-43821973 | None:intergenic |
| AATTGAAACACTATGTTTAG+AGG | 0.303735 | 5_3:+43821793 | Msa0813260:CDS |
| GACGGAGCAAGACATGTTTA+AGG | 0.316038 | 5_3:-43819684 | None:intergenic |
| TTGATTTATGTCGCGGTGTT+TGG | 0.326760 | 5_3:+43821251 | Msa0813260:CDS |
| ATCATTCCAGGTTAGTAATC+AGG | 0.327138 | 5_3:+43821641 | Msa0813260:intron |
| AAATAATTTAACGTTGGAAT+TGG | 0.339098 | 5_3:-43819613 | None:intergenic |
| TGCCGCAAATTCAGCGGCTT+TGG | 0.344353 | 5_3:-43820826 | None:intergenic |
| GTTGTGTAACAGCATTCATT+AGG | 0.357922 | 5_3:+43820979 | Msa0813260:CDS |
| AATATTAACAAGTCATGTTC+AGG | 0.369231 | 5_3:-43821373 | None:intergenic |
| ATTAGCTTCAGATGGATTAT+GGG | 0.376455 | 5_3:+43821393 | Msa0813260:CDS |
| CACTATGTTTAGAGGTTCAT+TGG | 0.381019 | 5_3:+43821801 | Msa0813260:exon |
| GTTGTTGTTCACGATGATTA+AGG | 0.382149 | 5_3:-43819656 | None:intergenic |
| TTCGGTAATCGAAGACAAAA+AGG | 0.384570 | 5_3:-43819869 | None:intergenic |
| TAACAACCAACAACCGTTGA+TGG | 0.393883 | 5_3:+43821701 | Msa0813260:CDS |
| CGCGGTGTTTGGAGGATTCA+AGG | 0.409122 | 5_3:+43821262 | Msa0813260:CDS |
| ATTCTAATAACTTTAGTCTC+AGG | 0.420683 | 5_3:-43821346 | None:intergenic |
| GTTGTTGAGGCGGAGGGAGA+TGG | 0.425322 | 5_3:+43820037 | Msa0813260:CDS |
| TGCCAAAGCCGCTGAATTTG+CGG | 0.431289 | 5_3:+43820824 | Msa0813260:CDS |
| TTACGTCAAACAAAGATTCT+GGG | 0.451101 | 5_3:+43819906 | Msa0813260:CDS |
| ATTTATGTCGCGGTGTTTGG+AGG | 0.459287 | 5_3:+43821254 | Msa0813260:CDS |
| ATGGAAGATCGTTATACAGC+TGG | 0.461700 | 5_3:+43820097 | Msa0813260:CDS |
| GTCGTTGTTGTTGTTGAAGA+TGG | 0.465895 | 5_3:-43819797 | None:intergenic |
| TAGGCTAATCTCTAATCATC+AGG | 0.469978 | 5_3:-43821847 | None:intergenic |
| TAAATATTCTAGTAAACAAA+TGG | 0.472837 | 5_3:-43821981 | None:intergenic |
| TTTATTGTAAGAGAGGGAGG+AGG | 0.476578 | 5_3:+43820068 | Msa0813260:CDS |
| CTGTTTATTGTAAGAGAGGG+AGG | 0.478469 | 5_3:+43820065 | Msa0813260:CDS |
| TTGTTGAGGCGGAGGGAGAT+GGG | 0.484067 | 5_3:+43820038 | Msa0813260:CDS |
| ACCTTCAAGGGAAGATGAAA+AGG | 0.484633 | 5_3:+43821091 | Msa0813260:CDS |
| TTGCAGAAAAGAGATGAAGA+AGG | 0.490349 | 5_3:-43819734 | None:intergenic |
| GAGGGATGTTGTTGAGGCGG+AGG | 0.493467 | 5_3:+43820030 | Msa0813260:CDS |
| TTATTGTAAGAGAGGGAGGA+GGG | 0.495221 | 5_3:+43820069 | Msa0813260:CDS |
| TTCAGATGGATTATGGGAAA+AGG | 0.495283 | 5_3:+43821399 | Msa0813260:CDS |
| CTTGCTGTATCAAGAGGAAT+CGG | 0.497083 | 5_3:+43821289 | Msa0813260:CDS |
| TCACCCATTGTTTCAAGTGT+CGG | 0.498005 | 5_3:-43821315 | None:intergenic |
| ATCTGATCACCGACCTTCAA+GGG | 0.504972 | 5_3:+43821079 | Msa0813260:CDS |
| CATCTGATCACCGACCTTCA+AGG | 0.507130 | 5_3:+43821078 | Msa0813260:CDS |
| ACAGCTGGGGTTAATCTTCG+TGG | 0.510384 | 5_3:+43820112 | Msa0813260:CDS |
| CGACACCGTCTGCGGTGGCG+AGG | 0.516352 | 5_3:+43820011 | Msa0813260:CDS |
| TACAGGCCATCAACGGTTGT+TGG | 0.517697 | 5_3:-43821707 | None:intergenic |
| ATTCTGTTTATTGTAAGAGA+GGG | 0.518939 | 5_3:+43820062 | Msa0813260:CDS |
| TTGTTAATATTAGCTTCAGA+TGG | 0.519141 | 5_3:+43821385 | Msa0813260:CDS |
| CAGCGGCTTTGGCACCTCCA+TGG | 0.527083 | 5_3:-43820815 | None:intergenic |
| TATTCTGTTTATTGTAAGAG+AGG | 0.528687 | 5_3:+43820061 | Msa0813260:CDS |
| GTGCTGTTATTAGTAGAGGA+GGG | 0.529836 | 5_3:+43821039 | Msa0813260:CDS |
| GCACAATTGTCTGTTTCAAG+AGG | 0.531606 | 5_3:+43821738 | Msa0813260:CDS |
| TTTCATCTTCCCTTGAAGGT+CGG | 0.533441 | 5_3:-43821088 | None:intergenic |
| AGACCGACACTTGAAACAAT+GGG | 0.534360 | 5_3:+43821312 | Msa0813260:CDS |
| AGGGATGTTGTTGAGGCGGA+GGG | 0.535503 | 5_3:+43820031 | Msa0813260:CDS |
| TCGATTACCGAAACTACCCT+TGG | 0.539502 | 5_3:+43819880 | Msa0813260:CDS |
| CAATTTGATTATCATGACAC+TGG | 0.543628 | 5_3:-43821775 | None:intergenic |
| CGTGCTGTTATTAGTAGAGG+AGG | 0.544244 | 5_3:+43821038 | Msa0813260:CDS |
| TGGAAGATCGTTATACAGCT+GGG | 0.545761 | 5_3:+43820098 | Msa0813260:CDS |
| TTTGGCGTATTTGATGGCCA+TGG | 0.545794 | 5_3:+43820798 | Msa0813260:CDS |
| GGTGAAGAAGGTGAAGAACA+AGG | 0.546327 | 5_3:-43819848 | None:intergenic |
| TGAACTCAGAATCGGTATTG+AGG | 0.547989 | 5_3:-43820929 | None:intergenic |
| TGCCGTGCTGTTATTAGTAG+AGG | 0.550511 | 5_3:+43821035 | Msa0813260:CDS |
| TGCTGTTATTAGTAGAGGAG+GGG | 0.551553 | 5_3:+43821040 | Msa0813260:CDS |
| AGAAACAGGTATATTAAGCC+TGG | 0.552089 | 5_3:-43819966 | None:intergenic |
| GACACCGTCTGCGGTGGCGA+GGG | 0.554379 | 5_3:+43820012 | Msa0813260:CDS |
| ACATCCCTCGCCACCGCAGA+CGG | 0.561418 | 5_3:-43820016 | None:intergenic |
| GTAACAGCATTCATTAGGAA+TGG | 0.564177 | 5_3:+43820984 | Msa0813260:CDS |
| AAACATGTCTTGCTCCGTCG+CGG | 0.570392 | 5_3:+43819688 | Msa0813260:exon |
| GCCACCGCAGACGGTGTCGC+CGG | 0.573609 | 5_3:-43820007 | None:intergenic |
| GAGACCGACACTTGAAACAA+TGG | 0.575527 | 5_3:+43821311 | Msa0813260:CDS |
| CGTCGCGGTTTCGAATTCGC+CGG | 0.576069 | 5_3:+43819703 | Msa0813260:CDS |
| TGAGTCAAATAATTTAACGT+TGG | 0.579202 | 5_3:-43819619 | None:intergenic |
| GGATCTCTTGCTGTATCAAG+AGG | 0.589287 | 5_3:+43821283 | Msa0813260:CDS |
| TGAAGAGGAAAAGACCTACC+AGG | 0.589521 | 5_3:+43819948 | Msa0813260:CDS |
| ACAGGTATATTAAGCCTGGT+AGG | 0.595689 | 5_3:-43819962 | None:intergenic |
| GGTAGAACAGAAGAAGATGA+TGG | 0.602328 | 5_3:+43821822 | Msa0813260:three_prime_UTR |
| GAAGGTGAAGAACAAGGAGA+AGG | 0.604617 | 5_3:-43819842 | None:intergenic |
| GAGCGACGAAGATGATGTTG+AGG | 0.609121 | 5_3:+43820887 | Msa0813260:CDS |
| GGCGAGGGATGTTGTTGAGG+CGG | 0.612440 | 5_3:+43820027 | Msa0813260:CDS |
| CGACGAAGATGATGTTGAGG+AGG | 0.613126 | 5_3:+43820890 | Msa0813260:CDS |
| AACTTAGTTGTGTCTAACGC+TGG | 0.615689 | 5_3:+43821008 | Msa0813260:CDS |
| TCCGGCGACACCGTCTGCGG+TGG | 0.616313 | 5_3:+43820006 | Msa0813260:CDS |
| GTTATTTGCCGCAAATTCAG+CGG | 0.620742 | 5_3:-43820832 | None:intergenic |
| TGTTCCGGCGACACCGTCTG+CGG | 0.623253 | 5_3:+43820003 | Msa0813260:CDS |
| GGTGGCGAGGGATGTTGTTG+AGG | 0.629842 | 5_3:+43820024 | Msa0813260:CDS |
| TAGTAGAGGAGGGGTTGCTG+AGG | 0.630412 | 5_3:+43821049 | Msa0813260:CDS |
| CGGCGAATTCGAAACCGCGA+CGG | 0.641319 | 5_3:-43819702 | None:intergenic |
| AAAGGACAGAATTGAGACCC+TGG | 0.643034 | 5_3:+43821109 | Msa0813260:CDS |
| CTCCTCTACTAATAACAGCA+CGG | 0.646708 | 5_3:-43821037 | None:intergenic |
| GGTTATGTTGATTTATGTCG+CGG | 0.653499 | 5_3:+43821244 | Msa0813260:CDS |
| GATGAAGAAGGTGAAAACAC+CGG | 0.659578 | 5_3:-43819722 | None:intergenic |
| GGAAGATCGTTATACAGCTG+GGG | 0.671830 | 5_3:+43820099 | Msa0813260:CDS |
| GTTGAGGAGGCAGTGAAGCG+CGG | 0.685913 | 5_3:+43820903 | Msa0813260:CDS |
| GGCGTATTTGATGGCCATGG+AGG | 0.699437 | 5_3:+43820801 | Msa0813260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAATATTTGTTATTTTTT+TGG | + | chr5_3:43820290-43820309 | Msa0813260:intron | 10.0% |
| !! | ATATATATACAAAAAAGAAT+AGG | - | chr5_3:43821869-43821888 | None:intergenic | 10.0% |
| !!! | TATAGATTATCTAATTATTT+TGG | + | chr5_3:43822026-43822045 | Msa0813260:three_prime_UTR | 10.0% |
| !! | ATAGAATATATAATATTGAG+TGG | + | chr5_3:43820179-43820198 | Msa0813260:intron | 15.0% |
| !!! | TTTAAAATGATGACATTTAT+TGG | + | chr5_3:43821907-43821926 | Msa0813260:three_prime_UTR | 15.0% |
| !! | TAAATATTCTAGTAAACAAA+TGG | - | chr5_3:43821984-43822003 | None:intergenic | 15.0% |
| !! | AAATAATTTAACGTTGGAAT+TGG | - | chr5_3:43819616-43819635 | None:intergenic | 20.0% |
| !! | AATATATAATATTGAGTGGT+TGG | + | chr5_3:43820183-43820202 | Msa0813260:intron | 20.0% |
| !! | TTTCAAACTTGATTTCTTAT+TGG | + | chr5_3:43820248-43820267 | Msa0813260:intron | 20.0% |
| !! | TGATTTACTCAAATTATTAG+CGG | - | chr5_3:43820425-43820444 | None:intergenic | 20.0% |
| !! | CACAATTCAAATTTAACTAA+TGG | - | chr5_3:43820607-43820626 | None:intergenic | 20.0% |
| !! | TAACTTAGAAAAAAACATCT+TGG | + | chr5_3:43820851-43820870 | Msa0813260:CDS | 20.0% |
| ! | TGAGTCAAATAATTTAACGT+TGG | - | chr5_3:43819622-43819641 | None:intergenic | 25.0% |
| ! | TATTCTGTTTATTGTAAGAG+AGG | + | chr5_3:43820061-43820080 | Msa0813260:CDS | 25.0% |
| ! | ATTCTGTTTATTGTAAGAGA+GGG | + | chr5_3:43820062-43820081 | Msa0813260:CDS | 25.0% |
| !! | TTGATATGCTTTTGTCAATT+GGG | + | chr5_3:43820214-43820233 | Msa0813260:intron | 25.0% |
| !!! | GTTATTTTTTTGGTCTGATT+TGG | + | chr5_3:43820300-43820319 | Msa0813260:intron | 25.0% |
| !!! | AATTTTTAAGCTATGTAGCT+CGG | + | chr5_3:43820371-43820390 | Msa0813260:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr5_3:43820450-43820469 | Msa0813260:intron | 25.0% |
| ! | GTAGATAGTTGAAACAAATT+AGG | + | chr5_3:43820626-43820645 | Msa0813260:intron | 25.0% |
| ! | TATAAGATGTGATTGTGTAA+AGG | + | chr5_3:43820733-43820752 | Msa0813260:intron | 25.0% |
| !!! | GTTTATTTTGTGATAATTGC+AGG | + | chr5_3:43820770-43820789 | Msa0813260:intron | 25.0% |
| !!! | TTTTTTCATGAACTCAGAAT+CGG | - | chr5_3:43820940-43820959 | None:intergenic | 25.0% |
| ! | TTCATGAAAAAAGATCTACA+TGG | + | chr5_3:43820948-43820967 | Msa0813260:CDS | 25.0% |
| ! | ATGGTAAAGAAAATTTACCA+GGG | - | chr5_3:43821129-43821148 | None:intergenic | 25.0% |
| ! | AATGGTAAAGAAAATTTACC+AGG | - | chr5_3:43821130-43821149 | None:intergenic | 25.0% |
| ! | ATTCTAATAACTTTAGTCTC+AGG | - | chr5_3:43821349-43821368 | None:intergenic | 25.0% |
| ! | AATATTAACAAGTCATGTTC+AGG | - | chr5_3:43821376-43821395 | None:intergenic | 25.0% |
| !! | TTGTTAATATTAGCTTCAGA+TGG | + | chr5_3:43821385-43821404 | Msa0813260:CDS | 25.0% |
| ! | GATTAACCTATATGTGTATT+CGG | + | chr5_3:43821444-43821463 | Msa0813260:intron | 25.0% |
| ! | GTTAATCATTCGATATCAAA+AGG | - | chr5_3:43821606-43821625 | None:intergenic | 25.0% |
| ! | AATTGAAACACTATGTTTAG+AGG | + | chr5_3:43821793-43821812 | Msa0813260:CDS | 25.0% |
| TTGTTTGACGTAAAAACCAA+GGG | - | chr5_3:43819899-43819918 | None:intergenic | 30.0% | |
| TTTGTTTGACGTAAAAACCA+AGG | - | chr5_3:43819900-43819919 | None:intergenic | 30.0% | |
| TTTACGTCAAACAAAGATTC+TGG | + | chr5_3:43819905-43819924 | Msa0813260:CDS | 30.0% | |
| TTACGTCAAACAAAGATTCT+GGG | + | chr5_3:43819906-43819925 | Msa0813260:CDS | 30.0% | |
| ! | GTTGATATGCTTTTGTCAAT+TGG | + | chr5_3:43820213-43820232 | Msa0813260:intron | 30.0% |
| ! | TTCATAGATTTTAAGCTGCT+AGG | + | chr5_3:43820532-43820551 | Msa0813260:intron | 30.0% |
| !! | TGTTGTTGTTGTTGATGATT+TGG | + | chr5_3:43820705-43820724 | Msa0813260:intron | 30.0% |
| !!! | TGATAATTGCAGGCTTTTTT+TGG | + | chr5_3:43820780-43820799 | Msa0813260:intron | 30.0% |
| ATGAAAAAAGATCTACATGG+TGG | + | chr5_3:43820951-43820970 | Msa0813260:CDS | 30.0% | |
| AAGAGAACTCAATACACAAA+TGG | - | chr5_3:43821148-43821167 | None:intergenic | 30.0% | |
| ! | TGAAACCTTGTATTTGAGTT+TGG | + | chr5_3:43821184-43821203 | Msa0813260:intron | 30.0% |
| AAGAACCAAACTCAAATACA+AGG | - | chr5_3:43821192-43821211 | None:intergenic | 30.0% | |
| !! | TATTAGCTTCAGATGGATTA+TGG | + | chr5_3:43821392-43821411 | Msa0813260:CDS | 30.0% |
| !! | ATTAGCTTCAGATGGATTAT+GGG | + | chr5_3:43821393-43821412 | Msa0813260:CDS | 30.0% |
| TCAAGTTTCTTAATCATTCC+AGG | + | chr5_3:43821629-43821648 | Msa0813260:intron | 30.0% | |
| CAATTTGATTATCATGACAC+TGG | - | chr5_3:43821778-43821797 | None:intergenic | 30.0% | |
| CTAGTAAACAAATGGCTAAA+TGG | - | chr5_3:43821976-43821995 | None:intergenic | 30.0% | |
| ! | GTTGTTGTTCACGATGATTA+AGG | - | chr5_3:43819659-43819678 | None:intergenic | 35.0% |
| TTGCAGAAAAGAGATGAAGA+AGG | - | chr5_3:43819737-43819756 | None:intergenic | 35.0% | |
| TTCGGTAATCGAAGACAAAA+AGG | - | chr5_3:43819872-43819891 | None:intergenic | 35.0% | |
| GTAAAAACCAAGGGTAGTTT+CGG | - | chr5_3:43819890-43819909 | None:intergenic | 35.0% | |
| !!! | AGAATGATGCTGTTTTGAAG+AGG | + | chr5_3:43819933-43819952 | Msa0813260:CDS | 35.0% |
| AGAAACAGGTATATTAAGCC+TGG | - | chr5_3:43819969-43819988 | None:intergenic | 35.0% | |
| ! | CAAAAAGCATGTTCAGAAAC+AGG | - | chr5_3:43819983-43820002 | None:intergenic | 35.0% |
| !! | TGAACATGCTTTTTGTGTTC+CGG | + | chr5_3:43819988-43820007 | Msa0813260:CDS | 35.0% |
| TCTTCGTGGTGAAAACAATT+TGG | + | chr5_3:43820126-43820145 | Msa0813260:CDS | 35.0% | |
| ACTCAAATTATTAGCGGTGT+CGG | - | chr5_3:43820419-43820438 | None:intergenic | 35.0% | |
| ! | TGTAAAGGTCTAACTTGTAC+AGG | + | chr5_3:43820748-43820767 | Msa0813260:intron | 35.0% |
| !!! | GCTTTTTTTGGCGTATTTGA+TGG | + | chr5_3:43820792-43820811 | Msa0813260:CDS | 35.0% |
| GTTGTGTAACAGCATTCATT+AGG | + | chr5_3:43820979-43820998 | Msa0813260:CDS | 35.0% | |
| GTAACAGCATTCATTAGGAA+TGG | + | chr5_3:43820984-43821003 | Msa0813260:CDS | 35.0% | |
| TGCATTGAAATTTGTCTTGC+AGG | + | chr5_3:43821219-43821238 | Msa0813260:intron | 35.0% | |
| GCATTGAAATTTGTCTTGCA+GGG | + | chr5_3:43821220-43821239 | Msa0813260:intron | 35.0% | |
| !! | GGTTATGTTGATTTATGTCG+CGG | + | chr5_3:43821244-43821263 | Msa0813260:CDS | 35.0% |
| !! | TTCAGATGGATTATGGGAAA+AGG | + | chr5_3:43821399-43821418 | Msa0813260:CDS | 35.0% |
| ACATGATTTGAGTGTGTGTT+TGG | - | chr5_3:43821527-43821546 | None:intergenic | 35.0% | |
| ! | GGAAAGTGTGTTTAGTTACT+CGG | - | chr5_3:43821585-43821604 | None:intergenic | 35.0% |
| ATCATTCCAGGTTAGTAATC+AGG | + | chr5_3:43821641-43821660 | Msa0813260:intron | 35.0% | |
| ! | CAATTGTGCAAGCTTTTTAC+AGG | - | chr5_3:43821727-43821746 | None:intergenic | 35.0% |
| CACTATGTTTAGAGGTTCAT+TGG | + | chr5_3:43821801-43821820 | Msa0813260:exon | 35.0% | |
| TAGGCTAATCTCTAATCATC+AGG | - | chr5_3:43821850-43821869 | None:intergenic | 35.0% | |
| ! | TGAATTTTTGTACCCGTAGA+TGG | + | chr5_3:43821930-43821949 | Msa0813260:three_prime_UTR | 35.0% |
| ! | GAATTTTTGTACCCGTAGAT+GGG | + | chr5_3:43821931-43821950 | Msa0813260:three_prime_UTR | 35.0% |
| ! | AATTTTTGTACCCGTAGATG+GGG | + | chr5_3:43821932-43821951 | Msa0813260:three_prime_UTR | 35.0% |
| GATGAAGAAGGTGAAAACAC+CGG | - | chr5_3:43819725-43819744 | None:intergenic | 40.0% | |
| ! | GTCGTTGTTGTTGTTGAAGA+TGG | - | chr5_3:43819800-43819819 | None:intergenic | 40.0% |
| CGAAGACAAAAAGGTGAAGA+AGG | - | chr5_3:43819863-43819882 | None:intergenic | 40.0% | |
| ACAGGTATATTAAGCCTGGT+AGG | - | chr5_3:43819965-43819984 | None:intergenic | 40.0% | |
| CTGTTTATTGTAAGAGAGGG+AGG | + | chr5_3:43820065-43820084 | Msa0813260:CDS | 40.0% | |
| TTTATTGTAAGAGAGGGAGG+AGG | + | chr5_3:43820068-43820087 | Msa0813260:CDS | 40.0% | |
| TTATTGTAAGAGAGGGAGGA+GGG | + | chr5_3:43820069-43820088 | Msa0813260:CDS | 40.0% | |
| ATGGAAGATCGTTATACAGC+TGG | + | chr5_3:43820097-43820116 | Msa0813260:CDS | 40.0% | |
| TGGAAGATCGTTATACAGCT+GGG | + | chr5_3:43820098-43820117 | Msa0813260:CDS | 40.0% | |
| TAAGCTATGTAGCTCGGATA+CGG | + | chr5_3:43820377-43820396 | Msa0813260:intron | 40.0% | |
| GTTATTTGCCGCAAATTCAG+CGG | - | chr5_3:43820835-43820854 | None:intergenic | 40.0% | |
| TGAACTCAGAATCGGTATTG+AGG | - | chr5_3:43820932-43820951 | None:intergenic | 40.0% | |
| AACTTAGTTGTGTCTAACGC+TGG | + | chr5_3:43821008-43821027 | Msa0813260:CDS | 40.0% | |
| CTCCTCTACTAATAACAGCA+CGG | - | chr5_3:43821040-43821059 | None:intergenic | 40.0% | |
| ! | GTGCTGTTATTAGTAGAGGA+GGG | + | chr5_3:43821039-43821058 | Msa0813260:CDS | 40.0% |
| TGCTGTTATTAGTAGAGGAG+GGG | + | chr5_3:43821040-43821059 | Msa0813260:CDS | 40.0% | |
| TTTCATCTTCCCTTGAAGGT+CGG | - | chr5_3:43821091-43821110 | None:intergenic | 40.0% | |
| ACCTTCAAGGGAAGATGAAA+AGG | + | chr5_3:43821091-43821110 | Msa0813260:CDS | 40.0% | |
| ! | TCCTTTTCATCTTCCCTTGA+AGG | - | chr5_3:43821095-43821114 | None:intergenic | 40.0% |
| TTGAAATTTGTCTTGCAGGG+TGG | + | chr5_3:43821223-43821242 | Msa0813260:intron | 40.0% | |
| TTGATTTATGTCGCGGTGTT+TGG | + | chr5_3:43821251-43821270 | Msa0813260:CDS | 40.0% | |
| ! | CTTGCTGTATCAAGAGGAAT+CGG | + | chr5_3:43821289-43821308 | Msa0813260:CDS | 40.0% |
| AGACCGACACTTGAAACAAT+GGG | + | chr5_3:43821312-43821331 | Msa0813260:CDS | 40.0% | |
| ! | TCACCCATTGTTTCAAGTGT+CGG | - | chr5_3:43821318-43821337 | None:intergenic | 40.0% |
| CAAACGCCGAATACACATAT+AGG | - | chr5_3:43821453-43821472 | None:intergenic | 40.0% | |
| ! | ATTGCTCGTCAATTTTGCGT+AGG | + | chr5_3:43821675-43821694 | Msa0813260:CDS | 40.0% |
| TAACAACCAACAACCGTTGA+TGG | + | chr5_3:43821701-43821720 | Msa0813260:CDS | 40.0% | |
| ! | AGCTTTTTACAGGCCATCAA+CGG | - | chr5_3:43821717-43821736 | None:intergenic | 40.0% |
| GCACAATTGTCTGTTTCAAG+AGG | + | chr5_3:43821738-43821757 | Msa0813260:CDS | 40.0% | |
| GGTAGAACAGAAGAAGATGA+TGG | + | chr5_3:43821822-43821841 | Msa0813260:three_prime_UTR | 40.0% | |
| ! | ATTTTTGTACCCGTAGATGG+GGG | + | chr5_3:43821933-43821952 | Msa0813260:three_prime_UTR | 40.0% |
| GACGGAGCAAGACATGTTTA+AGG | - | chr5_3:43819687-43819706 | None:intergenic | 45.0% | |
| GAAGGTGAAGAACAAGGAGA+AGG | - | chr5_3:43819845-43819864 | None:intergenic | 45.0% | |
| GGTGAAGAAGGTGAAGAACA+AGG | - | chr5_3:43819851-43819870 | None:intergenic | 45.0% | |
| TCGATTACCGAAACTACCCT+TGG | + | chr5_3:43819880-43819899 | Msa0813260:CDS | 45.0% | |
| TGAAGAGGAAAAGACCTACC+AGG | + | chr5_3:43819948-43819967 | Msa0813260:CDS | 45.0% | |
| GGAAGATCGTTATACAGCTG+GGG | + | chr5_3:43820099-43820118 | Msa0813260:CDS | 45.0% | |
| !! | TCTGATTTGGTAGCTGCACA+TGG | + | chr5_3:43820313-43820332 | Msa0813260:intron | 45.0% |
| ! | TTTGGCGTATTTGATGGCCA+TGG | + | chr5_3:43820798-43820817 | Msa0813260:CDS | 45.0% |
| ! | TGCCGTGCTGTTATTAGTAG+AGG | + | chr5_3:43821035-43821054 | Msa0813260:CDS | 45.0% |
| ! | CGTGCTGTTATTAGTAGAGG+AGG | + | chr5_3:43821038-43821057 | Msa0813260:CDS | 45.0% |
| ATCTGATCACCGACCTTCAA+GGG | + | chr5_3:43821079-43821098 | Msa0813260:CDS | 45.0% | |
| AAAGGACAGAATTGAGACCC+TGG | + | chr5_3:43821109-43821128 | Msa0813260:CDS | 45.0% | |
| ATTTATGTCGCGGTGTTTGG+AGG | + | chr5_3:43821254-43821273 | Msa0813260:CDS | 45.0% | |
| ! | GGATCTCTTGCTGTATCAAG+AGG | + | chr5_3:43821283-43821302 | Msa0813260:CDS | 45.0% |
| GAGACCGACACTTGAAACAA+TGG | + | chr5_3:43821311-43821330 | Msa0813260:CDS | 45.0% | |
| CTGCTTCCTGATTACTAACC+TGG | - | chr5_3:43821650-43821669 | None:intergenic | 45.0% | |
| GTCTGTTTCAAGAGGCTCTT+TGG | + | chr5_3:43821746-43821765 | Msa0813260:CDS | 45.0% | |
| AATCTCTACTCCCCCATCTA+CGG | - | chr5_3:43821946-43821965 | None:intergenic | 45.0% | |
| AAACATGTCTTGCTCCGTCG+CGG | + | chr5_3:43819688-43819707 | Msa0813260:exon | 50.0% | |
| ACAGCTGGGGTTAATCTTCG+TGG | + | chr5_3:43820112-43820131 | Msa0813260:CDS | 50.0% | |
| !! | ATATGTGTCGGTGTCGTGTC+CGG | + | chr5_3:43820462-43820481 | Msa0813260:intron | 50.0% |
| GTTTAGGAGGATCCTGGTGT+CGG | - | chr5_3:43820496-43820515 | None:intergenic | 50.0% | |
| GACACCAGGATCCTCCTAAA+CGG | + | chr5_3:43820495-43820514 | Msa0813260:intron | 50.0% | |
| TGCCAAAGCCGCTGAATTTG+CGG | + | chr5_3:43820824-43820843 | Msa0813260:CDS | 50.0% | |
| GAGCGACGAAGATGATGTTG+AGG | + | chr5_3:43820887-43820906 | Msa0813260:CDS | 50.0% | |
| CGACGAAGATGATGTTGAGG+AGG | + | chr5_3:43820890-43820909 | Msa0813260:CDS | 50.0% | |
| CATCTGATCACCGACCTTCA+AGG | + | chr5_3:43821078-43821097 | Msa0813260:CDS | 50.0% | |
| TACAGGCCATCAACGGTTGT+TGG | - | chr5_3:43821710-43821729 | None:intergenic | 50.0% | |
| ATCTCTACTCCCCCATCTAC+GGG | - | chr5_3:43821945-43821964 | None:intergenic | 50.0% | |
| AGGGATGTTGTTGAGGCGGA+GGG | + | chr5_3:43820031-43820050 | Msa0813260:CDS | 55.0% | |
| TTGTTGAGGCGGAGGGAGAT+GGG | + | chr5_3:43820038-43820057 | Msa0813260:CDS | 55.0% | |
| ! | GAGAGGGAGGAGGGAGTATA+TGG | + | chr5_3:43820078-43820097 | Msa0813260:CDS | 55.0% |
| ACCAGGATCCTCCTAAACGG+AGG | + | chr5_3:43820498-43820517 | Msa0813260:intron | 55.0% | |
| TCCTCCGTTTAGGAGGATCC+TGG | - | chr5_3:43820502-43820521 | None:intergenic | 55.0% | |
| CAGACACTCCTCCGTTTAGG+AGG | - | chr5_3:43820509-43820528 | None:intergenic | 55.0% | |
| GCACAGACACTCCTCCGTTT+AGG | - | chr5_3:43820512-43820531 | None:intergenic | 55.0% | |
| ! | GGCGTATTTGATGGCCATGG+AGG | + | chr5_3:43820801-43820820 | Msa0813260:CDS | 55.0% |
| TGCCGCAAATTCAGCGGCTT+TGG | - | chr5_3:43820829-43820848 | None:intergenic | 55.0% | |
| TAGTAGAGGAGGGGTTGCTG+AGG | + | chr5_3:43821049-43821068 | Msa0813260:CDS | 55.0% | |
| CGCGGTGTTTGGAGGATTCA+AGG | + | chr5_3:43821262-43821281 | Msa0813260:CDS | 55.0% | |
| CGGCGAATTCGAAACCGCGA+CGG | - | chr5_3:43819705-43819724 | None:intergenic | 60.0% | |
| CGTCGCGGTTTCGAATTCGC+CGG | + | chr5_3:43819703-43819722 | Msa0813260:CDS | 60.0% | |
| GGTGGCGAGGGATGTTGTTG+AGG | + | chr5_3:43820024-43820043 | Msa0813260:CDS | 60.0% | |
| GGCGAGGGATGTTGTTGAGG+CGG | + | chr5_3:43820027-43820046 | Msa0813260:CDS | 60.0% | |
| GAGGGATGTTGTTGAGGCGG+AGG | + | chr5_3:43820030-43820049 | Msa0813260:CDS | 60.0% | |
| GTTGTTGAGGCGGAGGGAGA+TGG | + | chr5_3:43820037-43820056 | Msa0813260:CDS | 60.0% | |
| GCTCGGATACGGACACGACA+CGG | + | chr5_3:43820388-43820407 | Msa0813260:intron | 60.0% | |
| GTTGAGGAGGCAGTGAAGCG+CGG | + | chr5_3:43820903-43820922 | Msa0813260:CDS | 60.0% | |
| TGTTCCGGCGACACCGTCTG+CGG | + | chr5_3:43820003-43820022 | Msa0813260:CDS | 65.0% | |
| ACATCCCTCGCCACCGCAGA+CGG | - | chr5_3:43820019-43820038 | None:intergenic | 65.0% | |
| ! | CCTGGTGTCGGACACGACAC+CGG | - | chr5_3:43820484-43820503 | None:intergenic | 65.0% |
| ! | CAGCGGCTTTGGCACCTCCA+TGG | - | chr5_3:43820818-43820837 | None:intergenic | 65.0% |
| GACACCGTCTGCGGTGGCGA+GGG | + | chr5_3:43820012-43820031 | Msa0813260:CDS | 70.0% | |
| !! | CCGGTGTCGTGTCCGACACC+AGG | + | chr5_3:43820481-43820500 | Msa0813260:intron | 70.0% |
| TCCGGCGACACCGTCTGCGG+TGG | + | chr5_3:43820006-43820025 | Msa0813260:CDS | 75.0% | |
| !! | GCCACCGCAGACGGTGTCGC+CGG | - | chr5_3:43820010-43820029 | None:intergenic | 75.0% |
| CGACACCGTCTGCGGTGGCG+AGG | + | chr5_3:43820011-43820030 | Msa0813260:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 43819568 | 43822076 | 43819568 | ID=Msa0813260;Name=Msa0813260 |
| chr5_3 | mRNA | 43819568 | 43822076 | 43819568 | ID=Msa0813260-mRNA-1;Parent=Msa0813260;Name=Msa0813260-mRNA-1;_AED=0.09;_eAED=0.09;_QI=124|1|1|1|1|1|4|264|378 |
| chr5_3 | exon | 43819568 | 43820147 | 43819568 | ID=Msa0813260-mRNA-1:exon:13488;Parent=Msa0813260-mRNA-1 |
| chr5_3 | exon | 43820792 | 43821130 | 43820792 | ID=Msa0813260-mRNA-1:exon:13489;Parent=Msa0813260-mRNA-1 |
| chr5_3 | exon | 43821241 | 43821420 | 43821241 | ID=Msa0813260-mRNA-1:exon:13490;Parent=Msa0813260-mRNA-1 |
| chr5_3 | exon | 43821651 | 43822076 | 43821651 | ID=Msa0813260-mRNA-1:exon:13491;Parent=Msa0813260-mRNA-1 |
| chr5_3 | five_prime_UTR | 43819568 | 43819691 | 43819568 | ID=Msa0813260-mRNA-1:five_prime_utr;Parent=Msa0813260-mRNA-1 |
| chr5_3 | CDS | 43819692 | 43820147 | 43819692 | ID=Msa0813260-mRNA-1:cds;Parent=Msa0813260-mRNA-1 |
| chr5_3 | CDS | 43820792 | 43821130 | 43820792 | ID=Msa0813260-mRNA-1:cds;Parent=Msa0813260-mRNA-1 |
| chr5_3 | CDS | 43821241 | 43821420 | 43821241 | ID=Msa0813260-mRNA-1:cds;Parent=Msa0813260-mRNA-1 |
| chr5_3 | CDS | 43821651 | 43821812 | 43821651 | ID=Msa0813260-mRNA-1:cds;Parent=Msa0813260-mRNA-1 |
| chr5_3 | three_prime_UTR | 43821813 | 43822076 | 43821813 | ID=Msa0813260-mRNA-1:three_prime_utr;Parent=Msa0813260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
