AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0739340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739340 MtrunA17_Chr5g0439061 78.541 466 85 4 41 506 294 744 0.0 694
Msa0739340 MtrunA17_Chr3g0102001 52.510 478 189 9 39 506 300 749 2.77e-154 457
Msa0739340 MtrunA17_Chr5g0439051 91.626 203 17 0 304 506 20 222 2.85e-125 364
Msa0739340 MtrunA17_Chr3g0098481 55.046 327 139 3 184 506 23 345 5.69e-123 363
Msa0739340 MtrunA17_Chr3g0098531 52.703 296 133 3 214 506 6 297 1.51e-104 314
Msa0739340 MtrunA17_Chr3g0098301 48.428 318 156 3 184 497 89 402 2.14e-98 303
Msa0739340 MtrunA17_Chr2g0286601 37.263 475 244 10 37 502 260 689 8.73e-95 302
Msa0739340 MtrunA17_Chr5g0439081 66.667 201 66 1 304 504 16 215 7.11e-90 274
Msa0739340 MtrunA17_Chr2g0286551 38.767 454 228 9 54 502 260 668 2.03e-89 287
Msa0739340 MtrunA17_Chr5g0439041 85.161 155 23 0 150 304 14 168 5.48e-88 269
Msa0739340 MtrunA17_Chr2g0286561 48.571 210 107 1 294 502 5 214 2.10e-64 208
Msa0739340 MtrunA17_Chr2g0284541 37.954 303 171 5 195 493 351 640 1.09e-46 172
Msa0739340 MtrunA17_Chr2g0297701 34.694 294 183 3 198 489 280 566 2.51e-46 170
Msa0739340 MtrunA17_Chr2g0297481 33.993 303 188 4 188 489 177 468 4.24e-46 167
Msa0739340 MtrunA17_Chr2g0297691 33.758 314 189 6 187 491 387 690 9.85e-46 170
Msa0739340 MtrunA17_Chr2g0284501 37.013 308 175 5 195 496 367 661 1.58e-45 169
Msa0739340 MtrunA17_Chr5g0439071 39.456 294 108 7 41 304 289 542 2.30e-45 167
Msa0739340 MtrunA17_Chr2g0297491 33.003 303 195 2 188 489 79 374 2.34e-45 163
Msa0739340 MtrunA17_Chr2g0297681 34.405 311 193 6 187 492 385 689 1.22e-44 167
Msa0739340 MtrunA17_Chr5g0439031 71.200 125 27 2 26 150 106 221 4.46e-44 155
Msa0739340 MtrunA17_Chr2g0297651 34.694 294 178 6 200 489 404 687 1.24e-42 161
Msa0739340 MtrunA17_Chr5g0443001 33.673 294 184 5 200 491 316 600 5.93e-41 155
Msa0739340 MtrunA17_Chr6g0456101 31.561 301 189 4 198 493 451 739 3.80e-39 151
Msa0739340 MtrunA17_Chr5g0410271 29.552 335 209 5 155 488 12 320 1.43e-37 140
Msa0739340 MtrunA17_Chr6g0456141 28.614 332 219 5 159 485 56 374 1.44e-37 142
Msa0739340 MtrunA17_Chr5g0410201 29.394 330 206 5 160 488 18 321 1.45e-37 140
Msa0739340 MtrunA17_Chr6g0457101 29.293 297 201 4 198 493 398 686 1.34e-36 144
Msa0739340 MtrunA17_Chr5g0410171 30.717 293 197 3 197 488 440 727 1.70e-36 143
Msa0739340 MtrunA17_Chr5g0410341 28.829 333 210 5 157 488 433 739 1.99e-35 140
Msa0739340 MtrunA17_Chr5g0410461 31.081 296 193 4 198 488 169 458 6.93e-35 136
Msa0739340 MtrunA17_Chr3g0100741 30.420 286 188 5 200 483 311 587 4.08e-34 135
Msa0739340 MtrunA17_Chr3g0100301 36.000 200 125 3 289 486 205 403 5.68e-34 132
Msa0739340 MtrunA17_Chr3g0098511 55.882 102 43 1 407 506 1 102 7.80e-34 123
Msa0739340 MtrunA17_Chr5g0410581 29.967 307 188 5 198 488 500 795 1.20e-33 135
Msa0739340 MtrunA17_Chr2g0297711 30.034 293 195 4 200 489 238 523 2.09e-32 130
Msa0739340 MtrunA17_Chr5g0410371 30.479 292 191 5 198 484 2 286 5.86e-32 124
Msa0739340 MtrunA17_Chr5g0410191 35.673 171 108 2 319 488 17 186 6.42e-30 115
Msa0739340 MtrunA17_Chr3g0096941 27.719 285 197 3 200 483 312 588 4.10e-29 121
Msa0739340 MtrunA17_Chr5g0410541 33.533 167 107 1 319 481 38 204 9.47e-23 96.7
Msa0739340 MtrunA17_Chr5g0410451 31.429 175 115 2 319 488 56 230 6.09e-20 89.0
Msa0739340 MtrunA17_Chr1g0211531 25.667 300 204 6 200 490 243 532 1.31e-17 85.9
Msa0739340 MtrunA17_Chr5g0410511 32.447 188 112 4 304 482 2 183 2.89e-17 80.5
Msa0739340 MtrunA17_Chr2g0297611 37.778 90 55 1 309 398 1 89 4.24e-16 73.6
Msa0739340 MtrunA17_Chr5g0410181 35.294 136 83 5 363 495 2 135 5.86e-16 74.7
Msa0739340 MtrunA17_Chr2g0297521 35.294 85 53 2 296 379 1 84 1.13e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0739340 AT3G18670.1 33.224 304 194 4 200 502 296 591 5.18e-44 164
Msa0739340 AT3G18670.2 32.895 304 195 3 200 502 351 646 5.58e-44 165
Msa0739340 AT5G35810.1 32.353 306 184 7 195 487 31 326 1.83e-39 146
Msa0739340 AT5G04700.1 32.051 312 203 4 187 495 353 658 4.80e-39 151
Msa0739340 AT5G04690.3 31.731 312 199 6 187 495 334 634 5.49e-38 147
Msa0739340 AT5G04690.1 35.065 231 146 2 267 495 386 614 5.86e-38 147
Msa0739340 AT5G04690.2 31.731 312 199 6 187 495 348 648 8.65e-38 147
Msa0739340 AT5G04730.1 29.882 338 216 8 159 489 262 585 2.70e-36 142
Msa0739340 AT3G54065.1 34.146 205 128 1 290 487 8 212 7.61e-34 128
Msa0739340 AT5G04680.3 32.627 236 147 3 267 491 401 635 1.48e-31 129
Msa0739340 AT5G04680.4 32.627 236 147 3 267 491 415 649 2.40e-31 128
Msa0739340 AT5G04680.1 32.627 236 147 3 267 491 444 678 2.81e-31 128
Msa0739340 AT5G04680.2 32.627 236 147 3 267 491 292 526 4.51e-31 126

Find 156 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGTTCTTGTTCTTTCTTC+TGG 0.038655 5_1:-57485952 None:intergenic
TTGTTCGTTCTTCTTTAATT+TGG 0.141661 5_1:-57485861 None:intergenic
AAACAAGTTGTTGCGTAAAT+TGG 0.148570 5_1:-57489272 None:intergenic
ATCTTGTTTGATGGATCTTC+TGG 0.161596 5_1:-57485887 None:intergenic
CGATCATTTGATGGATCTTC+TGG 0.196673 5_1:-57485830 None:intergenic
TGTTCTTCTTTAAATGTAAA+TGG 0.198671 5_1:-57485744 None:intergenic
CTTGTTTGTTCTTCTTTAAA+AGG 0.208124 5_1:-57485805 None:intergenic
TTCTTCTGGGTCTTGTTTGA+TGG 0.210847 5_1:-57485938 None:intergenic
AAAATATGTAAGTGTATTAT+TGG 0.211060 5_1:+57483470 Msa0739340:five_prime_UTR
GGACTTTGCTTCTCTGTTAC+TGG 0.211203 5_1:+57489068 Msa0739340:CDS
AAATGATGTGGGATATAAAA+TGG 0.216030 5_1:+57487975 Msa0739340:CDS
TTTGCCATTTCTTCGCTTAT+CGG 0.224342 5_1:+57489047 Msa0739340:CDS
AGTACACATTGGAAGGTAAA+TGG 0.231452 5_1:+57483222 Msa0739340:five_prime_UTR
TTCTTCTGGATCTTGTTTGA+TGG 0.241654 5_1:-57485896 None:intergenic
GTGGGATATAAAATGGTTTC+AGG 0.281361 5_1:+57487982 Msa0739340:CDS
GTGTCATTTGATGGATCTTC+TGG 0.282694 5_1:-57485775 None:intergenic
ATTGCTTTGTGAGCTGGTTC+TGG 0.293493 5_1:-57483275 None:intergenic
TCGTTCTTGTTCTTTCTTCT+GGG 0.298583 5_1:-57485951 None:intergenic
AAAGGAAGAAGTTGACAAAA+AGG 0.298922 5_1:+57487649 Msa0739340:CDS
AAAGTTCAAGCAACCTTTCA+TGG 0.305274 5_1:+57484846 Msa0739340:five_prime_UTR
ACAAAATCGACTTAAAATTA+TGG 0.305812 5_1:-57489247 None:intergenic
CGGTTGTGCCGCCGGGTACT+TGG 0.306931 5_1:-57488980 None:intergenic
TTTCAATGTCTCAACAATAA+GGG 0.308887 5_1:-57487810 None:intergenic
ATTGAAAACGAGAATGATTA+AGG 0.309215 5_1:+57487826 Msa0739340:CDS
CAAATCTCGACGAAAATCTT+TGG 0.312718 5_1:-57489132 None:intergenic
AAATATGTAAGTGTATTATT+GGG 0.317500 5_1:+57483471 Msa0739340:five_prime_UTR
TTGCCACTGAAACTTCTTCT+TGG 0.320343 5_1:+57489152 Msa0739340:CDS
TCAGCTGTTGAAGGCATTAA+TGG 0.324445 5_1:+57486385 Msa0739340:CDS
TATAAAGTGGTATAGTTATC+TGG 0.336636 5_1:-57485226 None:intergenic
GAATCCTGCTCCGTCGTATC+TGG 0.341785 5_1:+57488924 Msa0739340:CDS
ATCTTCTTCGTCCAAATCTA+TGG 0.349665 5_1:-57483333 None:intergenic
TTGGTGTGATTATGTTATGT+TGG 0.350614 5_1:+57489481 Msa0739340:three_prime_UTR
TGGTGTGATTATGTTATGTT+GGG 0.371403 5_1:+57489482 Msa0739340:three_prime_UTR
GCAGGCTTGCCTTCTAATAC+TGG 0.371770 5_1:-57489014 None:intergenic
ATCACATTATATATGAGTTC+TGG 0.376179 5_1:+57489620 Msa0739340:three_prime_UTR
GACTGACTACGATCATTTGA+TGG 0.376806 5_1:-57485839 None:intergenic
GGAGAATACAATATTGCATT+TGG 0.380804 5_1:+57487898 Msa0739340:CDS
GCCTTCATCGGTTGTGCCGC+CGG 0.385688 5_1:-57488988 None:intergenic
ATTACATGTAGCCATAGATT+TGG 0.386158 5_1:+57483322 Msa0739340:five_prime_UTR
TATATCCCACATCATTTGTA+AGG 0.387340 5_1:-57487969 None:intergenic
GTACACACTCTTGGCCTTAC+GGG 0.388425 5_1:+57486043 Msa0739340:CDS
TATATACCTTGTTTGAAGTT+GGG 0.389324 5_1:-57486491 None:intergenic
TCTTGTTTGATGGATCTTCT+GGG 0.391484 5_1:-57485886 None:intergenic
GGTAAACCTTGGCAGATTGC+TGG 0.400538 5_1:+57487941 Msa0739340:CDS
ACATAAAGAAAGTCAGATAA+AGG 0.400939 5_1:+57487574 Msa0739340:CDS
GTTCCAACGGCAACTGATAA+AGG 0.401370 5_1:+57489365 Msa0739340:CDS
TGCCACTGAAACTTCTTCTT+GGG 0.402128 5_1:+57489153 Msa0739340:CDS
CCATTTATTTAAAGAGTTGA+AGG 0.402654 5_1:+57486325 Msa0739340:intron
CTTGGTTCTTGCAATGGATA+AGG 0.410815 5_1:+57487874 Msa0739340:CDS
AACAAGTTGTTGCGTAAATT+GGG 0.414969 5_1:-57489271 None:intergenic
CTTTGAGTTTGTGTCATGAA+TGG 0.419985 5_1:-57487747 None:intergenic
AGGACTCAAAAGAAGAACTT+TGG 0.420552 5_1:+57487846 Msa0739340:CDS
TTGCAAAGTGACTATCCCTT+TGG 0.422762 5_1:-57483609 None:intergenic
ATATATACCTTGTTTGAAGT+TGG 0.427370 5_1:-57486492 None:intergenic
ATCAGTTGCCGTTGGAACCT+TGG 0.431237 5_1:-57489360 None:intergenic
AAGTCCGATAAGCGAAGAAA+TGG 0.432499 5_1:-57489051 None:intergenic
GAGATAATTGCTTTGTGAGC+TGG 0.433016 5_1:-57483281 None:intergenic
TCTATACTTTGATCTTGTAA+TGG 0.440450 5_1:+57489328 Msa0739340:CDS
ATGAGTACTTACAGTGGTAT+AGG 0.447687 5_1:-57484880 None:intergenic
TGTACACACTCTTGGCCTTA+CGG 0.449429 5_1:+57486042 Msa0739340:CDS
GAATAACTTGGTTCTTGCAA+TGG 0.454265 5_1:+57487868 Msa0739340:CDS
GCTATCCGAGGAGAATATTT+CGG 0.455653 5_1:+57483671 Msa0739340:five_prime_UTR
CTGCAAAGAAGAAGCACATA+TGG 0.460666 5_1:+57486357 Msa0739340:CDS
ATTACAAGATCAAAGTATAG+AGG 0.462561 5_1:-57489326 None:intergenic
GATCATTTGATGGATCTTCT+GGG 0.464785 5_1:-57485829 None:intergenic
AAGGTGGTCAACCAACTGAT+AGG 0.468369 5_1:+57486435 Msa0739340:CDS
ATATTTCCAACACCACACTA+TGG 0.473758 5_1:-57489411 None:intergenic
AGAAGAACTTTGGAATAACT+TGG 0.475550 5_1:+57487856 Msa0739340:CDS
GTCGTATCTGGCCTTGTAGC+CGG 0.482864 5_1:+57488936 Msa0739340:CDS
AACTCCAAATAAAACAATGA+TGG 0.483123 5_1:+57487607 Msa0739340:CDS
GTACACATTGGAAGGTAAAT+GGG 0.483948 5_1:+57483223 Msa0739340:five_prime_UTR
GAAGGCAGTCCAGTATTAGA+AGG 0.486374 5_1:+57489005 Msa0739340:CDS
AGGCATACTCGTGGAACCCC+TGG 0.487025 5_1:+57485126 Msa0739340:intron
GAAGTCAAATTTGAGAAAGA+TGG 0.491199 5_1:+57485165 Msa0739340:five_prime_UTR
AACAAAACCTGAATATGAAA+AGG 0.491310 5_1:+57487631 Msa0739340:CDS
ATAAATCAATTACATCCTTC+CGG 0.495793 5_1:-57489578 None:intergenic
CCTTCATCGGTTGTGCCGCC+GGG 0.497322 5_1:-57488987 None:intergenic
TTCTCCAATTAATAGCAGCT+TGG 0.502333 5_1:-57483556 None:intergenic
TTAATAGCAGCTTGGAAAAG+AGG 0.506298 5_1:-57483548 None:intergenic
TTATAAAAGACAGCAGTGAC+TGG 0.507389 5_1:+57488886 Msa0739340:CDS
TATCTTGCTCATATTTCCAA+AGG 0.507693 5_1:+57483593 Msa0739340:five_prime_UTR
GGACCTTACGCAGCATTCAC+TGG 0.509359 5_1:+57486410 Msa0739340:CDS
ATGGCAAAGGCATCGAATGC+AGG 0.510886 5_1:-57489032 None:intergenic
AGTAGAAGTGTTGTGGTACA+AGG 0.516357 5_1:-57488803 None:intergenic
ATCTTGCTCATATTTCCAAA+GGG 0.516972 5_1:+57483594 Msa0739340:five_prime_UTR
CGATCGATTTCCCTATCAGT+TGG 0.518766 5_1:-57486446 None:intergenic
CGAAGGAAACACCGGCTACA+AGG 0.520059 5_1:-57488947 None:intergenic
AGACTTGACAAACTCAAGAA+AGG 0.521641 5_1:-57486014 None:intergenic
TCTGCATATGTACACACTCT+TGG 0.522677 5_1:+57486034 Msa0739340:CDS
CCCGGCGGCACAACCGATGA+AGG 0.523089 5_1:+57488987 Msa0739340:CDS
CAACATCTTGTACGAGATGA+TGG 0.523957 5_1:+57483629 Msa0739340:five_prime_UTR
TTCGAGAAGTGAGAATTGAA+AGG 0.531102 5_1:-57489103 None:intergenic
TTCAATGTCTCAACAATAAG+GGG 0.532327 5_1:-57487809 None:intergenic
TACTTGGCTTGCTGTGGCGA+AGG 0.532602 5_1:-57488964 None:intergenic
GGATTCGTTTATACCATGAA+AGG 0.534712 5_1:-57484859 None:intergenic
GCAATTATCTCTGAATCAGC+TGG 0.537823 5_1:+57483293 Msa0739340:five_prime_UTR
ATTTACCGAAATATTCTCCT+CGG 0.541065 5_1:-57483676 None:intergenic
TTAAGTGAGTACACATTGGA+AGG 0.542159 5_1:+57483215 Msa0739340:five_prime_UTR
TAATACTGGACTGCCTTCAT+CGG 0.542610 5_1:-57489000 None:intergenic
AAGGCCAGATACGACGGAGC+AGG 0.546469 5_1:-57488928 None:intergenic
ATGGAGTAGTCAGCTGTTGA+AGG 0.548671 5_1:+57486376 Msa0739340:CDS
CATTTGGCAGCAGAGGCACT+AGG 0.552441 5_1:+57487914 Msa0739340:CDS
TTCTTGTTCATCGAACCTAT+CGG 0.553554 5_1:-57487546 None:intergenic
AATATTGCATTTGGCAGCAG+AGG 0.563757 5_1:+57487907 Msa0739340:CDS
GAAATATTCTCCTCGGATAG+CGG 0.564100 5_1:-57483669 None:intergenic
GGCAGCAGAGGCACTAGGTG+AGG 0.564778 5_1:+57487919 Msa0739340:CDS
TGAAACAAATAATGAAGCAA+TGG 0.566201 5_1:-57489195 None:intergenic
GTGTTTCCATAGTGTGGTGT+TGG 0.567001 5_1:+57489405 Msa0739340:three_prime_UTR
GTTCTAAAGTAGAAGTGTTG+TGG 0.567191 5_1:-57488810 None:intergenic
CTTTGTTCAGATGTGTGCTG+AGG 0.569842 5_1:-57484775 None:intergenic
AATCAAGTGTTTCCATAGTG+TGG 0.572101 5_1:+57489399 Msa0739340:exon
AATATGTAAGTGTATTATTG+GGG 0.573090 5_1:+57483472 Msa0739340:five_prime_UTR
TCACCTTTATCAGTTGCCGT+TGG 0.574717 5_1:-57489368 None:intergenic
TTATTTGTTTCATTCTGCAG+TGG 0.577345 5_1:+57489206 Msa0739340:CDS
TACTTTAGAACCAACAAAGA+GGG 0.578243 5_1:+57488822 Msa0739340:CDS
TTACAAGATCAAAGTATAGA+GGG 0.582219 5_1:-57489325 None:intergenic
AGGTGGTCAACCAACTGATA+GGG 0.582538 5_1:+57486436 Msa0739340:CDS
TCACCAGTGAATGCTGCGTA+AGG 0.584490 5_1:-57486413 None:intergenic
GTCAAATTTGAGAAAGATGG+AGG 0.586640 5_1:+57485168 Msa0739340:five_prime_UTR
GGCTACAAGGCCAGATACGA+CGG 0.588972 5_1:-57488934 None:intergenic
CTACTTTAGAACCAACAAAG+AGG 0.590391 5_1:+57488821 Msa0739340:CDS
GTTCTGCCTTACAAATGATG+TGG 0.591145 5_1:+57487963 Msa0739340:CDS
GCCGGGTACTTGGCTTGCTG+TGG 0.591377 5_1:-57488970 None:intergenic
TTTGAAGGCTGAAGGTCTAG+TGG 0.592102 5_1:-57484825 None:intergenic
TGCTGTGGCGAAGGAAACAC+CGG 0.593416 5_1:-57488955 None:intergenic
CATTTAAAGAAGAACAAACA+AGG 0.594001 5_1:+57485751 Msa0739340:five_prime_UTR
GCCACAGCAAGCCAAGTACC+CGG 0.597454 5_1:+57488969 Msa0739340:CDS
TTTGATCCCAACTTCAAACA+AGG 0.601868 5_1:+57486485 Msa0739340:CDS
GAACGAGAGAAATATCATGT+TGG 0.602064 5_1:+57485968 Msa0739340:CDS
TACGCAGCATTCACTGGTGA+AGG 0.602981 5_1:+57486416 Msa0739340:CDS
ACTCTTGGCCTTACGGGAGT+AGG 0.605219 5_1:+57486049 Msa0739340:CDS
TGTAAATACCTACTCCCGTA+AGG 0.605382 5_1:-57486057 None:intergenic
GCAGCAGAGGCACTAGGTGA+GGG 0.608379 5_1:+57487920 Msa0739340:CDS
TTTGTGTCATGAATGGCGCT+TGG 0.609130 5_1:-57487740 None:intergenic
GCAACGGCATAGAAAGTCAC+AGG 0.609441 5_1:-57489296 None:intergenic
GGTTCTTGCAATGGATAAGG+AGG 0.610176 5_1:+57487877 Msa0739340:CDS
AGGCTGAAGGTCTAGTGGCA+AGG 0.613015 5_1:-57484820 None:intergenic
CACTGGCAGGTGAAACCGAT+AGG 0.613392 5_1:+57487531 Msa0739340:intron
CTAGTGGCAAGGACTTTGAG+AGG 0.614051 5_1:-57484809 None:intergenic
AACCCAAGAAGAAGTTTCAG+TGG 0.615748 5_1:-57489155 None:intergenic
TTGGAAATGGTGAATGAACA+TGG 0.615998 5_1:+57483407 Msa0739340:five_prime_UTR
CACTAGGTGAGGGTAAACCT+TGG 0.620947 5_1:+57487930 Msa0739340:CDS
CTGTTGAAGGCATTAATGGA+AGG 0.622613 5_1:+57486389 Msa0739340:CDS
TCTATCAACAATTGTTGACA+TGG 0.630580 5_1:-57483144 None:intergenic
GCAGCATTCACTGGTGAAGG+TGG 0.632950 5_1:+57486419 Msa0739340:CDS
GCAGAACCAGCAATCTGCCA+AGG 0.638622 5_1:-57487947 None:intergenic
GGTGTGATTATGTTATGTTG+GGG 0.644922 5_1:+57489483 Msa0739340:three_prime_UTR
CTTGATGCTGCAAAATGCAA+TGG 0.650139 5_1:-57483437 None:intergenic
GCCAAATTAAGGCATACTCG+TGG 0.653602 5_1:+57485117 Msa0739340:intron
ATTCTTCACACCGCTATCCG+AGG 0.655802 5_1:+57483659 Msa0739340:five_prime_UTR
TTCTGCCTTACAAATGATGT+GGG 0.657635 5_1:+57487964 Msa0739340:CDS
GATAAGCGAAGAAATGGCAA+AGG 0.668284 5_1:-57489045 None:intergenic
GTATAGAGGGAATTGTGCAA+CGG 0.675406 5_1:-57489312 None:intergenic
TTATTGGGGATAATAATGAG+AGG 0.697139 5_1:+57483486 Msa0739340:five_prime_UTR
TGACTGGCTAAAAGACACGT+CGG 0.732129 5_1:+57488902 Msa0739340:CDS
ACAGCAAGCCAAGTACCCGG+CGG 0.744284 5_1:+57488972 Msa0739340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATT+AGG + chr5_1:57483878-57483897 Msa0739340:intron 0.0%
!! TTATAAAAAAAATAAAAAAT+TGG - chr5_1:57486792-57486811 None:intergenic 0.0%
!! TAAAAAGAAATTATATAAAG+TGG - chr5_1:57485242-57485261 None:intergenic 10.0%
!! AAAAAACAAATAAAGTTATT+TGG - chr5_1:57485703-57485722 None:intergenic 10.0%
!!! TTTTTTTTTTTTACTACAAA+AGG + chr5_1:57486116-57486135 Msa0739340:intron 10.0%
!!! TTTTTATTTGTATAACATTT+CGG - chr5_1:57486242-57486261 None:intergenic 10.0%
!! ATGTTATACAAATAAAAAAT+AGG + chr5_1:57486244-57486263 Msa0739340:intron 10.0%
!!! TTTTATTAGAAATTTGTTTT+CGG + chr5_1:57487432-57487451 Msa0739340:intron 10.0%
!!! TTGTTTTTATATAACTTAAA+AGG - chr5_1:57488233-57488252 None:intergenic 10.0%
!!! ACATATTTAAATATTTTCAT+TGG - chr5_1:57488734-57488753 None:intergenic 10.0%
!!! TTTAACACATAATAATTTTG+AGG + chr5_1:57483382-57483401 Msa0739340:five_prime_UTR 15.0%
!! AAAATATGTAAGTGTATTAT+TGG + chr5_1:57483470-57483489 Msa0739340:five_prime_UTR 15.0%
!! AAATATGTAAGTGTATTATT+GGG + chr5_1:57483471-57483490 Msa0739340:five_prime_UTR 15.0%
!!! TATAACTTGTCTTTTTTTTT+TGG + chr5_1:57483706-57483725 Msa0739340:intron 15.0%
!!! ATTAGGATTATGAATTTTTT+TGG + chr5_1:57483895-57483914 Msa0739340:intron 15.0%
!!! AAATATATTAGCATCTTTTT+TGG + chr5_1:57483938-57483957 Msa0739340:intron 15.0%
!! ATTTAATGCAAATATAAAGA+AGG - chr5_1:57484392-57484411 None:intergenic 15.0%
!! TTATAAGTTATGAACTAAAT+TGG - chr5_1:57484452-57484471 None:intergenic 15.0%
!! TAAACAATTTCTTTGTAATT+AGG - chr5_1:57484536-57484555 None:intergenic 15.0%
!!! CTATATTTTTATATATATCG+TGG + chr5_1:57484567-57484586 Msa0739340:intron 15.0%
!!! CTTTTCAATATAATATGTTA+TGG + chr5_1:57484713-57484732 Msa0739340:intron 15.0%
!! GTATATAATAGAACATTATA+GGG - chr5_1:57485588-57485607 None:intergenic 15.0%
!! AATATCAAATATACAAAAGT+AGG - chr5_1:57486161-57486180 None:intergenic 15.0%
!!! TTTTATTTGTATAACATTTC+GGG - chr5_1:57486241-57486260 None:intergenic 15.0%
!! ATACAAATAAAAAATAGGAT+AGG + chr5_1:57486249-57486268 Msa0739340:intron 15.0%
!!! GATTCTTTTTTCTTTTTTTT+TGG + chr5_1:57486592-57486611 Msa0739340:intron 15.0%
!!! ACGAAATATAATACTTTTTA+TGG + chr5_1:57486631-57486650 Msa0739340:intron 15.0%
!! CATACATAAAATAAAATAGA+TGG - chr5_1:57486687-57486706 None:intergenic 15.0%
!!! CATCTATTTTATTTTATGTA+TGG + chr5_1:57486685-57486704 Msa0739340:intron 15.0%
!! AATTTATAAGTTTAGTATAG+TGG - chr5_1:57486723-57486742 None:intergenic 15.0%
!!! TTTTCGGTAATATTTTATTT+GGG + chr5_1:57487448-57487467 Msa0739340:intron 15.0%
!! ATATAGTTTATACATAAGTT+TGG + chr5_1:57488272-57488291 Msa0739340:intron 15.0%
!! TATAGTTTATACATAAGTTT+GGG + chr5_1:57488273-57488292 Msa0739340:intron 15.0%
!! TATATATTGAACAAAGATTT+GGG + chr5_1:57488439-57488458 Msa0739340:intron 15.0%
!! TAAAAAATCGTTAACTTCTT+CGG - chr5_1:57483198-57483217 None:intergenic 20.0%
!! AATATGTAAGTGTATTATTG+GGG + chr5_1:57483472-57483491 Msa0739340:five_prime_UTR 20.0%
!! AAACATAAGTTATATATGCA+AGG - chr5_1:57483808-57483827 None:intergenic 20.0%
!! ATATATAGTTCTTTCACATT+AGG + chr5_1:57484110-57484129 Msa0739340:intron 20.0%
!! TATATAGTTCTTTCACATTA+GGG + chr5_1:57484111-57484130 Msa0739340:intron 20.0%
!! TTAATTAGTGAGATAAAGTT+AGG - chr5_1:57485538-57485557 None:intergenic 20.0%
!! GGTATATAATAGAACATTAT+AGG - chr5_1:57485589-57485608 None:intergenic 20.0%
!!! AACTTTATTTGTTTTTTGTC+AGG + chr5_1:57485706-57485725 Msa0739340:intron 20.0%
!! TGTTCTTCTTTAAATGTAAA+TGG - chr5_1:57485747-57485766 None:intergenic 20.0%
!!! AGAAAGGTTTCATAATTTTT+TGG - chr5_1:57486001-57486020 None:intergenic 20.0%
!! AATAAAAAATAGGATAGGAT+AGG + chr5_1:57486254-57486273 Msa0739340:intron 20.0%
!!! TCTTTTTTTTTGGTAAACTA+AGG + chr5_1:57486602-57486621 Msa0739340:intron 20.0%
!! TATCAAAACTATCAATTTCA+TGG + chr5_1:57486744-57486763 Msa0739340:intron 20.0%
!!! AAATATGAAATTGTGTTTTG+AGG - chr5_1:57486947-57486966 None:intergenic 20.0%
!! AACATAATTATCGTTGTAAA+CGG - chr5_1:57487378-57487397 None:intergenic 20.0%
!!! GTTTTCGGTAATATTTTATT+TGG + chr5_1:57487447-57487466 Msa0739340:intron 20.0%
!! AAAATCTTCATAACAACTTA+CGG + chr5_1:57488198-57488217 Msa0739340:intron 20.0%
!! ATAGTTTATACATAAGTTTG+GGG + chr5_1:57488274-57488293 Msa0739340:intron 20.0%
!! GTATATATTGAACAAAGATT+TGG + chr5_1:57488438-57488457 Msa0739340:intron 20.0%
!!! TAACAAATAATGGAGTAAAT+AGG - chr5_1:57488512-57488531 None:intergenic 20.0%
!! TATTTACTCCATTATTTGTT+AGG + chr5_1:57488511-57488530 Msa0739340:intron 20.0%
!!! TTAGTAAAACTTTTGCTTTA+TGG - chr5_1:57488571-57488590 None:intergenic 20.0%
!!! TTTGGGATTCATTTTTATTA+AGG - chr5_1:57488670-57488689 None:intergenic 20.0%
!!! CAATACTCAAACTTTTATTT+GGG - chr5_1:57488687-57488706 None:intergenic 20.0%
!!! ACAATACTCAAACTTTTATT+TGG - chr5_1:57488688-57488707 None:intergenic 20.0%
!!! GCTTTTTCTTTTTTTTATCT+TGG + chr5_1:57488764-57488783 Msa0739340:intron 20.0%
!!! ACAAAATCGACTTAAAATTA+TGG - chr5_1:57489250-57489269 None:intergenic 20.0%
!!! TTGTTTTGTTTTTGTTTTGT+TGG + chr5_1:57489462-57489481 Msa0739340:three_prime_UTR 20.0%
!!! TTTATTTTTATTTTACCGGA+AGG + chr5_1:57489563-57489582 Msa0739340:three_prime_UTR 20.0%
! AAAAAATCGTTAACTTCTTC+GGG - chr5_1:57483197-57483216 None:intergenic 25.0%
!!! TTTTTTAAGTGAGTACACAT+TGG + chr5_1:57483211-57483230 Msa0739340:five_prime_UTR 25.0%
!!! ACATAATAATTTTGAGGCAT+TGG + chr5_1:57483388-57483407 Msa0739340:five_prime_UTR 25.0%
! ATGAGTCTTAAAAATGAACA+TGG + chr5_1:57483518-57483537 Msa0739340:five_prime_UTR 25.0%
!!! AACTTGTCTTTTTTTTTTGG+TGG + chr5_1:57483709-57483728 Msa0739340:intron 25.0%
! CATAATATATGTAAGATCTG+AGG - chr5_1:57483750-57483769 None:intergenic 25.0%
!!! TTATGAATTTTTTTGGCACT+AGG + chr5_1:57483902-57483921 Msa0739340:intron 25.0%
! TAAGTTATGAACTAAATTGG+TGG - chr5_1:57484449-57484468 None:intergenic 25.0%
!!! GATGGATTAAAAATAGCTTA+GGG - chr5_1:57484484-57484503 None:intergenic 25.0%
!!! TGATGGATTAAAAATAGCTT+AGG - chr5_1:57484485-57484504 None:intergenic 25.0%
! ATATATATCGTGGATCAAAT+AGG + chr5_1:57484577-57484596 Msa0739340:intron 25.0%
! AATATGTTATGGAACAGATT+TGG + chr5_1:57484724-57484743 Msa0739340:intron 25.0%
!! ATTTGTTTGTTGCCAAATTA+AGG + chr5_1:57485106-57485125 Msa0739340:intron 25.0%
! TATAAAGTGGTATAGTTATC+TGG - chr5_1:57485229-57485248 None:intergenic 25.0%
! TGATACATCATCATAGATAT+TGG + chr5_1:57485340-57485359 Msa0739340:intron 25.0%
!!! ATAGATATTGGTTCCTTAAA+AGG + chr5_1:57485352-57485371 Msa0739340:intron 25.0%
!! CTTAAGTTATTGTCCTTTTA+AGG - chr5_1:57485368-57485387 None:intergenic 25.0%
! TAATAACCAAGGTTACAAAA+AGG - chr5_1:57485425-57485444 None:intergenic 25.0%
!!! ATTTTTTCTTCTTCGAAACA+TGG - chr5_1:57485610-57485629 None:intergenic 25.0%
!!! TTGTTTTTTGTCAGGAAAAA+TGG + chr5_1:57485714-57485733 Msa0739340:intron 25.0%
! CATTTAAAGAAGAACAAACA+AGG + chr5_1:57485751-57485770 Msa0739340:five_prime_UTR 25.0%
! CTTGTTTGTTCTTCTTTAAA+AGG - chr5_1:57485753-57485772 None:intergenic 25.0%
! TTGTTCGTTCTTCTTTAATT+TGG - chr5_1:57485864-57485883 None:intergenic 25.0%
! ACAATTCAGTAAATACTCTA+TGG - chr5_1:57486089-57486108 None:intergenic 25.0%
! CCTTCAACTCTTTAAATAAA+TGG - chr5_1:57486328-57486347 None:intergenic 25.0%
! CCATTTATTTAAAGAGTTGA+AGG + chr5_1:57486325-57486344 Msa0739340:intron 25.0%
!! TATATACCTTGTTTGAAGTT+GGG - chr5_1:57486494-57486513 None:intergenic 25.0%
!! ATATATACCTTGTTTGAAGT+TGG - chr5_1:57486495-57486514 None:intergenic 25.0%
!!! GGAAAATCCAAATTTTTCAA+GGG - chr5_1:57486851-57486870 None:intergenic 25.0%
!! TGGAAAATCCAAATTTTTCA+AGG - chr5_1:57486852-57486871 None:intergenic 25.0%
!! GAAAATGCTTAACTTTTACA+AGG - chr5_1:57486901-57486920 None:intergenic 25.0%
! GTAAAATTTATGTGTGTCTA+CGG - chr5_1:57486990-57487009 None:intergenic 25.0%
! TTAAATAAACTGCCTTAATG+GGG - chr5_1:57487200-57487219 None:intergenic 25.0%
! CTTAAATAAACTGCCTTAAT+GGG - chr5_1:57487201-57487220 None:intergenic 25.0%
! ACTTAAATAAACTGCCTTAA+TGG - chr5_1:57487202-57487221 None:intergenic 25.0%
! TTAAGTACTTTAACACAACT+TGG + chr5_1:57487216-57487235 Msa0739340:intron 25.0%
!!! AGAGTGTCTTTCAATATTTT+TGG + chr5_1:57487300-57487319 Msa0739340:intron 25.0%
! ACATAAAGAAAGTCAGATAA+AGG + chr5_1:57487574-57487593 Msa0739340:CDS 25.0%
! AACTCCAAATAAAACAATGA+TGG + chr5_1:57487607-57487626 Msa0739340:CDS 25.0%
!!! GTTTCCATCATTGTTTTATT+TGG - chr5_1:57487614-57487633 None:intergenic 25.0%
! AACAAAACCTGAATATGAAA+AGG + chr5_1:57487631-57487650 Msa0739340:CDS 25.0%
! AAAAAATGGAATAGTTGAAC+TGG + chr5_1:57487694-57487713 Msa0739340:CDS 25.0%
! TTTCAATGTCTCAACAATAA+GGG - chr5_1:57487813-57487832 None:intergenic 25.0%
!! TTTTCAATGTCTCAACAATA+AGG - chr5_1:57487814-57487833 None:intergenic 25.0%
! ATTGAAAACGAGAATGATTA+AGG + chr5_1:57487826-57487845 Msa0739340:CDS 25.0%
! AAATGATGTGGGATATAAAA+TGG + chr5_1:57487975-57487994 Msa0739340:CDS 25.0%
! TATACACAATCTTCCTAATT+TGG + chr5_1:57488400-57488419 Msa0739340:intron 25.0%
! ATACACAATCTTCCTAATTT+GGG + chr5_1:57488401-57488420 Msa0739340:intron 25.0%
! ATTCTTCACCTAACAAATAA+TGG - chr5_1:57488522-57488541 None:intergenic 25.0%
! TGAAACAAATAATGAAGCAA+TGG - chr5_1:57489198-57489217 None:intergenic 25.0%
! TTACAAGATCAAAGTATAGA+GGG - chr5_1:57489328-57489347 None:intergenic 25.0%
! ATTACAAGATCAAAGTATAG+AGG - chr5_1:57489329-57489348 None:intergenic 25.0%
! TCTATACTTTGATCTTGTAA+TGG + chr5_1:57489328-57489347 Msa0739340:CDS 25.0%
! ATAAATCAATTACATCCTTC+CGG - chr5_1:57489581-57489600 None:intergenic 25.0%
TCTATCAACAATTGTTGACA+TGG - chr5_1:57483147-57483166 None:intergenic 30.0%
ATTACATGTAGCCATAGATT+TGG + chr5_1:57483322-57483341 Msa0739340:five_prime_UTR 30.0%
!!! TAATTTTGAGGCATTGGAAA+TGG + chr5_1:57483394-57483413 Msa0739340:five_prime_UTR 30.0%
TTATTGGGGATAATAATGAG+AGG + chr5_1:57483486-57483505 Msa0739340:five_prime_UTR 30.0%
! TTTTCCAAGCTGCTATTAAT+TGG + chr5_1:57483552-57483571 Msa0739340:five_prime_UTR 30.0%
TATCTTGCTCATATTTCCAA+AGG + chr5_1:57483593-57483612 Msa0739340:five_prime_UTR 30.0%
ATCTTGCTCATATTTCCAAA+GGG + chr5_1:57483594-57483613 Msa0739340:five_prime_UTR 30.0%
ATTTACCGAAATATTCTCCT+CGG - chr5_1:57483679-57483698 None:intergenic 30.0%
!!! TTGTCTTTTTTTTTTGGTGG+TGG + chr5_1:57483712-57483731 Msa0739340:intron 30.0%
! TAATTGTGTGTGTGAGTTTT+CGG + chr5_1:57484039-57484058 Msa0739340:intron 30.0%
!! TGCTCTGATTCATTTGTTTT+AGG + chr5_1:57484139-57484158 Msa0739340:intron 30.0%
!!! AGAATTTTTCAAGACACATG+TGG + chr5_1:57484193-57484212 Msa0739340:intron 30.0%
AAGAGCAATGTTATATCTCT+AGG - chr5_1:57484343-57484362 None:intergenic 30.0%
GGAGAATTAATGATAGTTCA+GGG - chr5_1:57484515-57484534 None:intergenic 30.0%
AGGAGAATTAATGATAGTTC+AGG - chr5_1:57484516-57484535 None:intergenic 30.0%
TAATTAGAGTGCAAGAGAAT+GGG - chr5_1:57484687-57484706 None:intergenic 30.0%
TTAATTAGAGTGCAAGAGAA+TGG - chr5_1:57484688-57484707 None:intergenic 30.0%
GAAGTCAAATTTGAGAAAGA+TGG + chr5_1:57485165-57485184 Msa0739340:five_prime_UTR 30.0%
! TATTATTTACCCGTGAGTTT+TGG + chr5_1:57485440-57485459 Msa0739340:intron 30.0%
TGACTTTGCATTATGTTGTA+CGG - chr5_1:57485486-57485505 None:intergenic 30.0%
!!! GGTTTTTTTGTGTCATTTGA+TGG - chr5_1:57485787-57485806 None:intergenic 30.0%
AAAAATAGGATAGGATAGGA+TGG + chr5_1:57486258-57486277 Msa0739340:intron 30.0%
GATTGTTCCCTTGAAAAATT+TGG + chr5_1:57486841-57486860 Msa0739340:intron 30.0%
AGTTCATGGGAAAATATGAT+TGG - chr5_1:57486872-57486891 None:intergenic 30.0%
TACAAGGATTCAAAGTTCAT+GGG - chr5_1:57486885-57486904 None:intergenic 30.0%
TTACAAGGATTCAAAGTTCA+TGG - chr5_1:57486886-57486905 None:intergenic 30.0%
!!! TTGTGTTTTGAGGACATTAT+GGG - chr5_1:57486937-57486956 None:intergenic 30.0%
!!! ATTGTGTTTTGAGGACATTA+TGG - chr5_1:57486938-57486957 None:intergenic 30.0%
! ACTTCTTCCTTTTCATATTC+AGG - chr5_1:57487641-57487660 None:intergenic 30.0%
AAAGGAAGAAGTTGACAAAA+AGG + chr5_1:57487649-57487668 Msa0739340:CDS 30.0%
!!! TTTTTTGCTGCAACCAAAAA+TGG - chr5_1:57487680-57487699 None:intergenic 30.0%
!!! TTTTTGGTTGCAGCAAAAAA+TGG + chr5_1:57487680-57487699 Msa0739340:CDS 30.0%
TTCAATGTCTCAACAATAAG+GGG - chr5_1:57487812-57487831 None:intergenic 30.0%
!! AGAAGAACTTTGGAATAACT+TGG + chr5_1:57487856-57487875 Msa0739340:CDS 30.0%
GGAGAATACAATATTGCATT+TGG + chr5_1:57487898-57487917 Msa0739340:CDS 30.0%
TATATCCCACATCATTTGTA+AGG - chr5_1:57487972-57487991 None:intergenic 30.0%
!! ATGTCGGATTGACTTATTTT+AGG + chr5_1:57488107-57488126 Msa0739340:intron 30.0%
!!! AGGATGGTTTTAAAAAAGGA+AGG + chr5_1:57488315-57488334 Msa0739340:intron 30.0%
TTAAAAAAGGAAGGATGAAG+TGG + chr5_1:57488324-57488343 Msa0739340:intron 30.0%
TGGAAGAAATTGAGAACTTT+GGG + chr5_1:57488344-57488363 Msa0739340:intron 30.0%
ATATTGAACAAAGATTTGGG+AGG + chr5_1:57488442-57488461 Msa0739340:intron 30.0%
TATTGAACAAAGATTTGGGA+GGG + chr5_1:57488443-57488462 Msa0739340:intron 30.0%
!! TACTTTAGAACCAACAAAGA+GGG + chr5_1:57488822-57488841 Msa0739340:CDS 30.0%
! TGATATTTTTCCCTCTTTGT+TGG - chr5_1:57488835-57488854 None:intergenic 30.0%
TTATTTGTTTCATTCTGCAG+TGG + chr5_1:57489206-57489225 Msa0739340:CDS 30.0%
AACAAGTTGTTGCGTAAATT+GGG - chr5_1:57489274-57489293 None:intergenic 30.0%
AAACAAGTTGTTGCGTAAAT+TGG - chr5_1:57489275-57489294 None:intergenic 30.0%
!!! TGTAATGGCTATTTTAACCA+AGG + chr5_1:57489343-57489362 Msa0739340:CDS 30.0%
!!! TATTTTAACCAAGGTTCCAA+CGG + chr5_1:57489352-57489371 Msa0739340:CDS 30.0%
TTGGTGTGATTATGTTATGT+TGG + chr5_1:57489481-57489500 Msa0739340:three_prime_UTR 30.0%
TGGTGTGATTATGTTATGTT+GGG + chr5_1:57489482-57489501 Msa0739340:three_prime_UTR 30.0%
TTAAGTGAGTACACATTGGA+AGG + chr5_1:57483215-57483234 Msa0739340:five_prime_UTR 35.0%
AGTACACATTGGAAGGTAAA+TGG + chr5_1:57483222-57483241 Msa0739340:five_prime_UTR 35.0%
GTACACATTGGAAGGTAAAT+GGG + chr5_1:57483223-57483242 Msa0739340:five_prime_UTR 35.0%
ATCTTCTTCGTCCAAATCTA+TGG - chr5_1:57483336-57483355 None:intergenic 35.0%
TTGGAAATGGTGAATGAACA+TGG + chr5_1:57483407-57483426 Msa0739340:five_prime_UTR 35.0%
! ATTGCATTTTGCAGCATCAA+GGG + chr5_1:57483439-57483458 Msa0739340:five_prime_UTR 35.0%
TTAATAGCAGCTTGGAAAAG+AGG - chr5_1:57483551-57483570 None:intergenic 35.0%
TTCTCCAATTAATAGCAGCT+TGG - chr5_1:57483559-57483578 None:intergenic 35.0%
!!! TTTTTTTTTTGGTGGTGGTG+AGG + chr5_1:57483717-57483736 Msa0739340:intron 35.0%
!!! TTTTTTTTTGGTGGTGGTGA+GGG + chr5_1:57483718-57483737 Msa0739340:intron 35.0%
GAGATTCTAGATTCGAACTT+GGG - chr5_1:57484018-57484037 None:intergenic 35.0%
TAGTTCTTTCACATTAGGGA+TGG + chr5_1:57484115-57484134 Msa0739340:intron 35.0%
! TAGTTCAGGGATTAACTTGA+TGG - chr5_1:57484502-57484521 None:intergenic 35.0%
! AAGGTTGCTTGAACTTTTGA+AGG - chr5_1:57484843-57484862 None:intergenic 35.0%
AAAGTTCAAGCAACCTTTCA+TGG + chr5_1:57484846-57484865 Msa0739340:five_prime_UTR 35.0%
GGATTCGTTTATACCATGAA+AGG - chr5_1:57484862-57484881 None:intergenic 35.0%
ATGAGTACTTACAGTGGTAT+AGG - chr5_1:57484883-57484902 None:intergenic 35.0%
GTATGTATGAGTACTTACAG+TGG - chr5_1:57484889-57484908 None:intergenic 35.0%
!!! ATTGCTTTTTCATGATCCAG+GGG - chr5_1:57485145-57485164 None:intergenic 35.0%
!!! CATTGCTTTTTCATGATCCA+GGG - chr5_1:57485146-57485165 None:intergenic 35.0%
!!! TCATTGCTTTTTCATGATCC+AGG - chr5_1:57485147-57485166 None:intergenic 35.0%
GTCAAATTTGAGAAAGATGG+AGG + chr5_1:57485168-57485187 Msa0739340:five_prime_UTR 35.0%
TATGTCATATGCCATCAGTA+CGG + chr5_1:57485270-57485289 Msa0739340:intron 35.0%
ACCAATAAAAACCGTACTGA+TGG - chr5_1:57485284-57485303 None:intergenic 35.0%
! CAAAAGCCTTTTTGTAACCT+TGG + chr5_1:57485416-57485435 Msa0739340:intron 35.0%
TCACGGGTAAATAATAACCA+AGG - chr5_1:57485436-57485455 None:intergenic 35.0%
CGTTAAAGTTGTTGGATTCT+AGG - chr5_1:57485653-57485672 None:intergenic 35.0%
ACACACATCGTTAAAGTTGT+TGG - chr5_1:57485661-57485680 None:intergenic 35.0%
AACTTTAACGATGTGTGTCA+CGG + chr5_1:57485663-57485682 Msa0739340:intron 35.0%
! GATCATTTGATGGATCTTCT+GGG - chr5_1:57485832-57485851 None:intergenic 35.0%
! TCTTGTTTGATGGATCTTCT+GGG - chr5_1:57485889-57485908 None:intergenic 35.0%
! ATCTTGTTTGATGGATCTTC+TGG - chr5_1:57485890-57485909 None:intergenic 35.0%
! TTCTTCTGGATCTTGTTTGA+TGG - chr5_1:57485899-57485918 None:intergenic 35.0%
!!! CTGAGTTTTGTTCTTTCTTC+TGG - chr5_1:57485913-57485932 None:intergenic 35.0%
TCGTTCTTGTTCTTTCTTCT+GGG - chr5_1:57485954-57485973 None:intergenic 35.0%
GAACGAGAGAAATATCATGT+TGG + chr5_1:57485968-57485987 Msa0739340:CDS 35.0%
AGACTTGACAAACTCAAGAA+AGG - chr5_1:57486017-57486036 None:intergenic 35.0%
TTTGATCCCAACTTCAAACA+AGG + chr5_1:57486485-57486504 Msa0739340:CDS 35.0%
TTATATGAGCACATCTTGCA+AGG + chr5_1:57487012-57487031 Msa0739340:intron 35.0%
TATATGAGCACATCTTGCAA+GGG + chr5_1:57487013-57487032 Msa0739340:intron 35.0%
GTCAGATTTGTATGTGTTTG+AGG - chr5_1:57487071-57487090 None:intergenic 35.0%
! CATGTTGAGGATGTTTTTCT+TGG - chr5_1:57487138-57487157 None:intergenic 35.0%
CTTGACGATTTCAAACATGT+TGG + chr5_1:57487166-57487185 Msa0739340:intron 35.0%
ACAACTTGGTTGCAATATCA+AGG + chr5_1:57487230-57487249 Msa0739340:intron 35.0%
CAACTTGGTTGCAATATCAA+GGG + chr5_1:57487231-57487250 Msa0739340:intron 35.0%
ACAATTCAAATATTCCCGCA+TGG + chr5_1:57487340-57487359 Msa0739340:intron 35.0%
TTCTTGTTCATCGAACCTAT+CGG - chr5_1:57487549-57487568 None:intergenic 35.0%
!!! TGTTTTATTTGGAGTTGACG+TGG - chr5_1:57487603-57487622 None:intergenic 35.0%
! CAAAAAGGAGACACCATTTT+TGG + chr5_1:57487664-57487683 Msa0739340:CDS 35.0%
! CTTTGAGTTTGTGTCATGAA+TGG - chr5_1:57487750-57487769 None:intergenic 35.0%
AGGACTCAAAAGAAGAACTT+TGG + chr5_1:57487846-57487865 Msa0739340:CDS 35.0%
! GAATAACTTGGTTCTTGCAA+TGG + chr5_1:57487868-57487887 Msa0739340:CDS 35.0%
TTCTGCCTTACAAATGATGT+GGG + chr5_1:57487964-57487983 Msa0739340:CDS 35.0%
GTGGGATATAAAATGGTTTC+AGG + chr5_1:57487982-57488001 Msa0739340:CDS 35.0%
CTATCGACATAACATTTGTG+AGG + chr5_1:57488134-57488153 Msa0739340:intron 35.0%
! TACATAAGTTTGGGGTACTT+TGG + chr5_1:57488282-57488301 Msa0739340:intron 35.0%
! ACATAAGTTTGGGGTACTTT+GGG + chr5_1:57488283-57488302 Msa0739340:intron 35.0%
!!! GGAGAGGATGGTTTTAAAAA+AGG + chr5_1:57488311-57488330 Msa0739340:intron 35.0%
GTGGAAGAAATTGAGAACTT+TGG + chr5_1:57488343-57488362 Msa0739340:intron 35.0%
AAGAAATTGAGAACTTTGGG+AGG + chr5_1:57488347-57488366 Msa0739340:intron 35.0%
! AGAAATTGAGAACTTTGGGA+GGG + chr5_1:57488348-57488367 Msa0739340:intron 35.0%
!! GTTCTAAAGTAGAAGTGTTG+TGG - chr5_1:57488813-57488832 None:intergenic 35.0%
!! CTACTTTAGAACCAACAAAG+AGG + chr5_1:57488821-57488840 Msa0739340:CDS 35.0%
TTATAAAAGACAGCAGTGAC+TGG + chr5_1:57488886-57488905 Msa0739340:CDS 35.0%
! TTTGCCATTTCTTCGCTTAT+CGG + chr5_1:57489047-57489066 Msa0739340:CDS 35.0%
TTCGAGAAGTGAGAATTGAA+AGG - chr5_1:57489106-57489125 None:intergenic 35.0%
CAAATCTCGACGAAAATCTT+TGG - chr5_1:57489135-57489154 None:intergenic 35.0%
AATCAAGTGTTTCCATAGTG+TGG + chr5_1:57489399-57489418 Msa0739340:exon 35.0%
ATATTTCCAACACCACACTA+TGG - chr5_1:57489414-57489433 None:intergenic 35.0%
GGTGTGATTATGTTATGTTG+GGG + chr5_1:57489483-57489502 Msa0739340:three_prime_UTR 35.0%
GAGATAATTGCTTTGTGAGC+TGG - chr5_1:57483284-57483303 None:intergenic 40.0%
GCAATTATCTCTGAATCAGC+TGG + chr5_1:57483293-57483312 Msa0739340:five_prime_UTR 40.0%
CTTGATGCTGCAAAATGCAA+TGG - chr5_1:57483440-57483459 None:intergenic 40.0%
! CATTGCATTTTGCAGCATCA+AGG + chr5_1:57483438-57483457 Msa0739340:five_prime_UTR 40.0%
! TTGCATTTTGCAGCATCAAG+GGG + chr5_1:57483440-57483459 Msa0739340:five_prime_UTR 40.0%
TTGCAAAGTGACTATCCCTT+TGG - chr5_1:57483612-57483631 None:intergenic 40.0%
CAACATCTTGTACGAGATGA+TGG + chr5_1:57483629-57483648 Msa0739340:five_prime_UTR 40.0%
GAAATATTCTCCTCGGATAG+CGG - chr5_1:57483672-57483691 None:intergenic 40.0%
GCTATCCGAGGAGAATATTT+CGG + chr5_1:57483671-57483690 Msa0739340:five_prime_UTR 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG - chr5_1:57483779-57483798 None:intergenic 40.0%
CGAGATTCTAGATTCGAACT+TGG - chr5_1:57484019-57484038 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG - chr5_1:57484269-57484288 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG - chr5_1:57484272-57484291 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG + chr5_1:57484280-57484299 Msa0739340:intron 40.0%
!! CTTGAACTTTTGAAGGCTGA+AGG - chr5_1:57484836-57484855 None:intergenic 40.0%
TCCACGAGTATGCCTTAATT+TGG - chr5_1:57485121-57485140 None:intergenic 40.0%
! GCCATCAGTACGGTTTTTAT+TGG + chr5_1:57485280-57485299 Msa0739340:intron 40.0%
!! GTGTCATTTGATGGATCTTC+TGG - chr5_1:57485778-57485797 None:intergenic 40.0%
! CGATCATTTGATGGATCTTC+TGG - chr5_1:57485833-57485852 None:intergenic 40.0%
GACTGACTACGATCATTTGA+TGG - chr5_1:57485842-57485861 None:intergenic 40.0%
!! TTCTTCTGGGTCTTGTTTGA+TGG - chr5_1:57485941-57485960 None:intergenic 40.0%
CTCGTTCTTGTTCTTTCTTC+TGG - chr5_1:57485955-57485974 None:intergenic 40.0%
TCTGCATATGTACACACTCT+TGG + chr5_1:57486034-57486053 Msa0739340:CDS 40.0%
TGTAAATACCTACTCCCGTA+AGG - chr5_1:57486060-57486079 None:intergenic 40.0%
GTAGGCACTAATTTCGTCTT+CGG - chr5_1:57486143-57486162 None:intergenic 40.0%
! CTGCAAAGAAGAAGCACATA+TGG + chr5_1:57486357-57486376 Msa0739340:CDS 40.0%
!! TCAGCTGTTGAAGGCATTAA+TGG + chr5_1:57486385-57486404 Msa0739340:CDS 40.0%
!! CTGTTGAAGGCATTAATGGA+AGG + chr5_1:57486389-57486408 Msa0739340:CDS 40.0%
! TTAGGGTTTAGGGTTTCAAG+AGG - chr5_1:57487044-57487063 None:intergenic 40.0%
CGCGAAATGTGCTTCTTTAA+CGG - chr5_1:57487093-57487112 None:intergenic 40.0%
! TAAAGAAGCACATTTCGCGA+AGG + chr5_1:57487094-57487113 Msa0739340:intron 40.0%
TCAAGTTTGCATGCATGTTG+AGG - chr5_1:57487151-57487170 None:intergenic 40.0%
TTAGTTGTCTACCTTCACTG+AGG + chr5_1:57487270-57487289 Msa0739340:intron 40.0%
TTCAAATATTCCCGCATGGA+AGG + chr5_1:57487344-57487363 Msa0739340:intron 40.0%
! CTTGGTTCTTGCAATGGATA+AGG + chr5_1:57487874-57487893 Msa0739340:CDS 40.0%
AATATTGCATTTGGCAGCAG+AGG + chr5_1:57487907-57487926 Msa0739340:CDS 40.0%
GTTCTGCCTTACAAATGATG+TGG + chr5_1:57487963-57487982 Msa0739340:CDS 40.0%
!! TTTGGGGTACTTTGGGATTT+AGG + chr5_1:57488290-57488309 Msa0739340:intron 40.0%
! GAAATTGAGAACTTTGGGAG+GGG + chr5_1:57488349-57488368 Msa0739340:intron 40.0%
! AAATTGAGAACTTTGGGAGG+GGG + chr5_1:57488350-57488369 Msa0739340:intron 40.0%
CACAATCTTCCTAATTTGGG+AGG + chr5_1:57488404-57488423 Msa0739340:intron 40.0%
!! CTTTTGAGTCCTCCCAAATT+AGG - chr5_1:57488416-57488435 None:intergenic 40.0%
!! AGTAGAAGTGTTGTGGTACA+AGG - chr5_1:57488806-57488825 None:intergenic 40.0%
TAATACTGGACTGCCTTCAT+CGG - chr5_1:57489003-57489022 None:intergenic 40.0%
GATAAGCGAAGAAATGGCAA+AGG - chr5_1:57489048-57489067 None:intergenic 40.0%
AAGTCCGATAAGCGAAGAAA+TGG - chr5_1:57489054-57489073 None:intergenic 40.0%
TTGCCACTGAAACTTCTTCT+TGG + chr5_1:57489152-57489171 Msa0739340:CDS 40.0%
TGCCACTGAAACTTCTTCTT+GGG + chr5_1:57489153-57489172 Msa0739340:CDS 40.0%
AACCCAAGAAGAAGTTTCAG+TGG - chr5_1:57489158-57489177 None:intergenic 40.0%
GTATAGAGGGAATTGTGCAA+CGG - chr5_1:57489315-57489334 None:intergenic 40.0%
! ATTGCTTTGTGAGCTGGTTC+TGG - chr5_1:57483278-57483297 None:intergenic 45.0%
GTGAGCTTAACTCAGTTGGT+AGG - chr5_1:57483780-57483799 None:intergenic 45.0%
CCTTGTGAGCTTAACTCAGT+TGG - chr5_1:57483784-57483803 None:intergenic 45.0%
CCAACTGAGTTAAGCTCACA+AGG + chr5_1:57483781-57483800 Msa0739340:intron 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG - chr5_1:57484252-57484271 None:intergenic 45.0%
CTTTGTTCAGATGTGTGCTG+AGG - chr5_1:57484778-57484797 None:intergenic 45.0%
TTTGAAGGCTGAAGGTCTAG+TGG - chr5_1:57484828-57484847 None:intergenic 45.0%
GCCAAATTAAGGCATACTCG+TGG + chr5_1:57485117-57485136 Msa0739340:intron 45.0%
TGAAGGGGATCCAAAACTCA+CGG - chr5_1:57485453-57485472 None:intergenic 45.0%
TACGGTGCACATAACTGAAG+GGG - chr5_1:57485468-57485487 None:intergenic 45.0%
GTACGGTGCACATAACTGAA+GGG - chr5_1:57485469-57485488 None:intergenic 45.0%
TGTACGGTGCACATAACTGA+AGG - chr5_1:57485470-57485489 None:intergenic 45.0%
!! TGTACACACTCTTGGCCTTA+CGG + chr5_1:57486042-57486061 Msa0739340:CDS 45.0%
ATGGAGTAGTCAGCTGTTGA+AGG + chr5_1:57486376-57486395 Msa0739340:CDS 45.0%
AAGGTGGTCAACCAACTGAT+AGG + chr5_1:57486435-57486454 Msa0739340:CDS 45.0%
AGGTGGTCAACCAACTGATA+GGG + chr5_1:57486436-57486455 Msa0739340:CDS 45.0%
! CGATCGATTTCCCTATCAGT+TGG - chr5_1:57486449-57486468 None:intergenic 45.0%
TTTCGCGAAGGAAAGTTCTG+AGG + chr5_1:57487106-57487125 Msa0739340:intron 45.0%
TTGGATCACGTTCCCCATTA+AGG + chr5_1:57487185-57487204 Msa0739340:intron 45.0%
GTCTACCTTCACTGAGGAAA+AGG + chr5_1:57487276-57487295 Msa0739340:intron 45.0%
! CTCTACCTTTTCCTCAGTGA+AGG - chr5_1:57487284-57487303 None:intergenic 45.0%
GGATTATATGCCTTCCATGC+GGG - chr5_1:57487357-57487376 None:intergenic 45.0%
CGGATTATATGCCTTCCATG+CGG - chr5_1:57487358-57487377 None:intergenic 45.0%
CCAGTGTCAAATGCAATGGA+AGG - chr5_1:57487517-57487536 None:intergenic 45.0%
CCTTCCATTGCATTTGACAC+TGG + chr5_1:57487514-57487533 Msa0739340:intron 45.0%
TTTGTGTCATGAATGGCGCT+TGG - chr5_1:57487743-57487762 None:intergenic 45.0%
GGTTCTTGCAATGGATAAGG+AGG + chr5_1:57487877-57487896 Msa0739340:CDS 45.0%
!! GGTACTTTGGGATTTAGGAG+AGG + chr5_1:57488295-57488314 Msa0739340:intron 45.0%
!! CTTTGGGATTTAGGAGAGGA+TGG + chr5_1:57488299-57488318 Msa0739340:intron 45.0%
! AATTGAGAACTTTGGGAGGG+GGG + chr5_1:57488351-57488370 Msa0739340:intron 45.0%
AAAGATTTGGGAGGGTTTGC+AGG + chr5_1:57488451-57488470 Msa0739340:intron 45.0%
AAGATTTGGGAGGGTTTGCA+GGG + chr5_1:57488452-57488471 Msa0739340:intron 45.0%
! TGACTGGCTAAAAGACACGT+CGG + chr5_1:57488902-57488921 Msa0739340:CDS 45.0%
GAAGGCAGTCCAGTATTAGA+AGG + chr5_1:57489005-57489024 Msa0739340:CDS 45.0%
GGACTTTGCTTCTCTGTTAC+TGG + chr5_1:57489068-57489087 Msa0739340:CDS 45.0%
GTTCCAACGGCAACTGATAA+AGG + chr5_1:57489365-57489384 Msa0739340:CDS 45.0%
TCACCTTTATCAGTTGCCGT+TGG - chr5_1:57489371-57489390 None:intergenic 45.0%
GTGTTTCCATAGTGTGGTGT+TGG + chr5_1:57489405-57489424 Msa0739340:three_prime_UTR 45.0%
!!! TTTTTTTTAATTTTAAAATG+AGG - chr5_1:57483104-57483123 None:intergenic 5.0%
!!! TATAATTTCTTTTTAATATT+TGG + chr5_1:57485247-57485266 Msa0739340:five_prime_UTR 5.0%
!!! AATTTTTATTTTTATTTTAC+CGG + chr5_1:57489559-57489578 Msa0739340:three_prime_UTR 5.0%
ATTCTTCACACCGCTATCCG+AGG + chr5_1:57483659-57483678 Msa0739340:five_prime_UTR 50.0%
AGCCACACCTCCTTGAATTG+TGG + chr5_1:57484259-57484278 Msa0739340:intron 50.0%
TGCCACAATTCAAGGAGGTG+TGG - chr5_1:57484264-57484283 None:intergenic 50.0%
CTAGTGGCAAGGACTTTGAG+AGG - chr5_1:57484812-57484831 None:intergenic 50.0%
GAAGGGGATCCAAAACTCAC+GGG - chr5_1:57485452-57485471 None:intergenic 50.0%
!! GTACACACTCTTGGCCTTAC+GGG + chr5_1:57486043-57486062 Msa0739340:CDS 50.0%
TCACCAGTGAATGCTGCGTA+AGG - chr5_1:57486416-57486435 None:intergenic 50.0%
TACGCAGCATTCACTGGTGA+AGG + chr5_1:57486416-57486435 Msa0739340:CDS 50.0%
CCTGCCAGTGTCAAATGCAA+TGG - chr5_1:57487521-57487540 None:intergenic 50.0%
CCATTGCATTTGACACTGGC+AGG + chr5_1:57487518-57487537 Msa0739340:intron 50.0%
CACTAGGTGAGGGTAAACCT+TGG + chr5_1:57487930-57487949 Msa0739340:CDS 50.0%
GGTAAACCTTGGCAGATTGC+TGG + chr5_1:57487941-57487960 Msa0739340:CDS 50.0%
CTTAAACCCCATGCGCATGT+CGG + chr5_1:57488091-57488110 Msa0739340:intron 50.0%
AGTCAATCCGACATGCGCAT+GGG - chr5_1:57488101-57488120 None:intergenic 50.0%
AAGTCAATCCGACATGCGCA+TGG - chr5_1:57488102-57488121 None:intergenic 50.0%
GCAGGCTTGCCTTCTAATAC+TGG - chr5_1:57489017-57489036 None:intergenic 50.0%
!! ATGGCAAAGGCATCGAATGC+AGG - chr5_1:57489035-57489054 None:intergenic 50.0%
GCAACGGCATAGAAAGTCAC+AGG - chr5_1:57489299-57489318 None:intergenic 50.0%
ATCAGTTGCCGTTGGAACCT+TGG - chr5_1:57489363-57489382 None:intergenic 50.0%
AGGCTGAAGGTCTAGTGGCA+AGG - chr5_1:57484823-57484842 None:intergenic 55.0%
!! ACTCTTGGCCTTACGGGAGT+AGG + chr5_1:57486049-57486068 Msa0739340:CDS 55.0%
GGACCTTACGCAGCATTCAC+TGG + chr5_1:57486410-57486429 Msa0739340:CDS 55.0%
GCAGCATTCACTGGTGAAGG+TGG + chr5_1:57486419-57486438 Msa0739340:CDS 55.0%
CACTGGCAGGTGAAACCGAT+AGG + chr5_1:57487531-57487550 Msa0739340:intron 55.0%
!! CATTTGGCAGCAGAGGCACT+AGG + chr5_1:57487914-57487933 Msa0739340:CDS 55.0%
GCAGAACCAGCAATCTGCCA+AGG - chr5_1:57487950-57487969 None:intergenic 55.0%
GTCAATCCGACATGCGCATG+GGG - chr5_1:57488100-57488119 None:intergenic 55.0%
TTGGGAGGGTTTGCAGGGAT+TGG + chr5_1:57488457-57488476 Msa0739340:intron 55.0%
GAATCCTGCTCCGTCGTATC+TGG + chr5_1:57488924-57488943 Msa0739340:CDS 55.0%
GGCTACAAGGCCAGATACGA+CGG - chr5_1:57488937-57488956 None:intergenic 55.0%
!! GTCGTATCTGGCCTTGTAGC+CGG + chr5_1:57488936-57488955 Msa0739340:CDS 55.0%
! CGAAGGAAACACCGGCTACA+AGG - chr5_1:57488950-57488969 None:intergenic 55.0%
TGCTGTGGCGAAGGAAACAC+CGG - chr5_1:57488958-57488977 None:intergenic 55.0%
!! TACTTGGCTTGCTGTGGCGA+AGG - chr5_1:57488967-57488986 None:intergenic 55.0%
AGGCATACTCGTGGAACCCC+TGG + chr5_1:57485126-57485145 Msa0739340:intron 60.0%
!! GCAGCAGAGGCACTAGGTGA+GGG + chr5_1:57487920-57487939 Msa0739340:CDS 60.0%
! ACTTTGGGAGGGGGGAGCTT+TGG + chr5_1:57488359-57488378 Msa0739340:intron 60.0%
! CTTTGGGAGGGGGGAGCTTT+GGG + chr5_1:57488360-57488379 Msa0739340:intron 60.0%
AAGGCCAGATACGACGGAGC+AGG - chr5_1:57488931-57488950 None:intergenic 60.0%
GCCACAGCAAGCCAAGTACC+CGG + chr5_1:57488969-57488988 Msa0739340:CDS 60.0%
ACAGCAAGCCAAGTACCCGG+CGG + chr5_1:57488972-57488991 Msa0739340:CDS 60.0%
!! GGCAGCAGAGGCACTAGGTG+AGG + chr5_1:57487919-57487938 Msa0739340:CDS 65.0%
!! GCCGGGTACTTGGCTTGCTG+TGG - chr5_1:57488973-57488992 None:intergenic 65.0%
! CCTTCATCGGTTGTGCCGCC+GGG - chr5_1:57488990-57489009 None:intergenic 65.0%
! GCCTTCATCGGTTGTGCCGC+CGG - chr5_1:57488991-57489010 None:intergenic 65.0%
CGGTTGTGCCGCCGGGTACT+TGG - chr5_1:57488983-57489002 None:intergenic 70.0%
CCCGGCGGCACAACCGATGA+AGG + chr5_1:57488987-57489006 Msa0739340:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 57483066 57489640 57483066 ID=Msa0739340;Name=Msa0739340
chr5_1 mRNA 57483066 57489640 57483066 ID=Msa0739340-mRNA-1;Parent=Msa0739340;Name=Msa0739340-mRNA-1;_AED=0.07;_eAED=0.07;_QI=981|1|1|1|0.83|0.71|7|240|506
chr5_1 exon 57483066 57483692 57483066 ID=Msa0739340-mRNA-1:exon:16279;Parent=Msa0739340-mRNA-1
chr5_1 exon 57484741 57484890 57484741 ID=Msa0739340-mRNA-1:exon:16280;Parent=Msa0739340-mRNA-1
chr5_1 exon 57485128 57485268 57485128 ID=Msa0739340-mRNA-1:exon:16281;Parent=Msa0739340-mRNA-1
chr5_1 exon 57485728 57486070 57485728 ID=Msa0739340-mRNA-1:exon:16282;Parent=Msa0739340-mRNA-1
chr5_1 exon 57486339 57486506 57486339 ID=Msa0739340-mRNA-1:exon:16283;Parent=Msa0739340-mRNA-1
chr5_1 exon 57487540 57488003 57487540 ID=Msa0739340-mRNA-1:exon:16284;Parent=Msa0739340-mRNA-1
chr5_1 exon 57488792 57489640 57488792 ID=Msa0739340-mRNA-1:exon:16285;Parent=Msa0739340-mRNA-1
chr5_1 five_prime_UTR 57483066 57483692 57483066 ID=Msa0739340-mRNA-1:five_prime_utr;Parent=Msa0739340-mRNA-1
chr5_1 five_prime_UTR 57484741 57484890 57484741 ID=Msa0739340-mRNA-1:five_prime_utr;Parent=Msa0739340-mRNA-1
chr5_1 five_prime_UTR 57485128 57485268 57485128 ID=Msa0739340-mRNA-1:five_prime_utr;Parent=Msa0739340-mRNA-1
chr5_1 five_prime_UTR 57485728 57485790 57485728 ID=Msa0739340-mRNA-1:five_prime_utr;Parent=Msa0739340-mRNA-1
chr5_1 CDS 57485791 57486070 57485791 ID=Msa0739340-mRNA-1:cds;Parent=Msa0739340-mRNA-1
chr5_1 CDS 57486339 57486506 57486339 ID=Msa0739340-mRNA-1:cds;Parent=Msa0739340-mRNA-1
chr5_1 CDS 57487540 57488003 57487540 ID=Msa0739340-mRNA-1:cds;Parent=Msa0739340-mRNA-1
chr5_1 CDS 57488792 57489400 57488792 ID=Msa0739340-mRNA-1:cds;Parent=Msa0739340-mRNA-1
chr5_1 three_prime_UTR 57489401 57489640 57489401 ID=Msa0739340-mRNA-1:three_prime_utr;Parent=Msa0739340-mRNA-1
Gene Sequence

>Msa0739340

ATGACACAAAAAAACCTTTTAAAGAAGAACAAACAAGACCCAGAAGATCCATCAAATGATCGTAGTCAGTCCAAATTAAAGAAGAACGAACAAGACCCAGAAGATCCATCAAACAAGATCCAGAAGAAAGAACAAAACTCAGAAGATCCATCAAACAAGACCCAGAAGAAAGAACAAGAACGAGAGAAATATCATGTTGGATTTTTGCCAAAAAATTATGAAACCTTTCTTGAGTTTGTCAAGTCTGCATATGTACACACTCTTGGCCTTACGGGAGTAGAGTTGAAGGATGTAAAGACTGCAAAGAAGAAGCACATATGGAGTAGTCAGCTGTTGAAGGCATTAATGGAAGGACCTTACGCAGCATTCACTGGTGAAGGTGGTCAACCAACTGATAGGGAAATCGATCGTGATATTTATAATATTTTTGATCCCAACTTCAAACAAGGTGAAACCGATAGGTTCGATGAACAAGAACAAAAACATAAAGAAAGTCAGATAAAGGAAGCCACGTCAACTCCAAATAAAACAATGATGGAAACAAAACCTGAATATGAAAAGGAAGAAGTTGACAAAAAGGAGACACCATTTTTGGTTGCAGCAAAAAATGGAATAGTTGAACTGGTTAACGAAATTCTAGACAAAATACCAAGCGCCATTCATGACACAAACTCAAAGAAAGAAAATGTATTGCTTGTTGCAGTGAAGTCAAGACAACCCCTTATTGTTGAGACATTGAAAACGAGAATGATTAAGGACTCAAAAGAAGAACTTTGGAATAACTTGGTTCTTGCAATGGATAAGGAGGAGAATACAATATTGCATTTGGCAGCAGAGGCACTAGGTGAGGGTAAACCTTGGCAGATTGCTGGTTCTGCCTTACAAATGATGTGGGATATAAAATGGTTTCAGTATATCAAAAGCCTTGTACCACAACACTTCTACTTTAGAACCAACAAAGAGGGAAAAATATCAAGTGAAATTTTCAAGAAATCACACGAAGATCTTATAAAAGACAGCAGTGACTGGCTAAAAGACACGTCGGAATCCTGCTCCGTCGTATCTGGCCTTGTAGCCGGTGTTTCCTTCGCCACAGCAAGCCAAGTACCCGGCGGCACAACCGATGAAGGCAGTCCAGTATTAGAAGGCAAGCCTGCATTCGATGCCTTTGCCATTTCTTCGCTTATCGGACTTTGCTTCTCTGTTACTGGACTCATCATGTTCCTTTCAATTCTCACTTCTCGAAAACAAGCCAAAGATTTTCGTCGAGATTTGCCACTGAAACTTCTTCTTGGGTTAAGCTCTCTTTTTGTGTCCATTGCTTCATTATTTGTTTCATTCTGCAGTGGACATTTTTTTCTGCTTAGCCATAATTTTAAGTCGATTTTGTTCCCAATTTACGCAACAACTTGTTTACCTGTGACTTTCTATGCCGTTGCACAATTCCCTCTATACTTTGATCTTGTAATGGCTATTTTAACCAAGGTTCCAACGGCAACTGATAAAGGTGACAATTTATAA
Protein sequence

>Msa0739340

MTQKNLLKKNKQDPEDPSNDRSQSKLKKNEQDPEDPSNKIQKKEQNSEDPSNKTQKKEQEREKYHVGFLPKNYETFLEFVKSAYVHTLGLTGVELKDVKTAKKKHIWSSQLLKALMEGPYAAFTGEGGQPTDREIDRDIYNIFDPNFKQGETDRFDEQEQKHKESQIKEATSTPNKTMMETKPEYEKEEVDKKETPFLVAAKNGIVELVNEILDKIPSAIHDTNSKKENVLLVAVKSRQPLIVETLKTRMIKDSKEELWNNLVLAMDKEENTILHLAAEALGEGKPWQIAGSALQMMWDIKWFQYIKSLVPQHFYFRTNKEGKISSEIFKKSHEDLIKDSSDWLKDTSESCSVVSGLVAGVSFATASQVPGGTTDEGSPVLEGKPAFDAFAISSLIGLCFSVTGLIMFLSILTSRKQAKDFRRDLPLKLLLGLSSLFVSIASLFVSFCSGHFFLLSHNFKSILFPIYATTCLPVTFYAVAQFPLYFDLVMAILTKVPTATDKGDNL*