AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0859960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0859960 MtrunA17_Chr5g0439061 74.403 461 70 5 279 700 293 744 0.0 635
Msa0859960 MtrunA17_Chr5g0439061 69.528 233 28 5 25 224 86 308 1.75e-92 303
Msa0859960 MtrunA17_Chr3g0102001 50.766 457 179 8 281 700 302 749 7.39e-137 420
Msa0859960 MtrunA17_Chr3g0102001 35.887 248 114 6 19 225 73 316 3.01e-33 136
Msa0859960 MtrunA17_Chr5g0439051 91.626 203 17 0 498 700 20 222 7.18e-123 365
Msa0859960 MtrunA17_Chr3g0098481 54.037 322 133 4 390 700 28 345 7.30e-114 346
Msa0859960 MtrunA17_Chr3g0098531 51.186 295 130 4 416 700 7 297 3.20e-96 299
Msa0859960 MtrunA17_Chr2g0286601 39.352 432 230 10 283 696 272 689 9.79e-90 295
Msa0859960 MtrunA17_Chr3g0098301 47.284 313 150 4 390 691 94 402 2.76e-89 285
Msa0859960 MtrunA17_Chr5g0439081 66.667 201 66 1 498 698 16 215 2.59e-87 273
Msa0859960 MtrunA17_Chr2g0286551 39.810 422 226 8 292 696 258 668 5.86e-85 281
Msa0859960 MtrunA17_Chr5g0439031 54.093 281 48 3 95 375 8 207 5.31e-77 246
Msa0859960 MtrunA17_Chr5g0439041 74.834 151 23 3 362 498 19 168 2.03e-67 220
Msa0859960 MtrunA17_Chr2g0286561 48.571 210 107 1 488 696 5 214 1.74e-62 207
Msa0859960 MtrunA17_Chr5g0439071 31.570 586 269 23 1 498 1 542 2.50e-47 176
Msa0859960 MtrunA17_Chr2g0297701 34.014 294 178 4 399 683 280 566 3.64e-41 159
Msa0859960 MtrunA17_Chr2g0297691 32.517 286 189 3 401 683 404 688 4.08e-41 160
Msa0859960 MtrunA17_Chr2g0297481 30.960 323 199 5 365 683 166 468 9.09e-41 155
Msa0859960 MtrunA17_Chr2g0297491 31.803 305 200 3 384 683 73 374 2.06e-40 152
Msa0859960 MtrunA17_Chr2g0284541 36.634 303 168 6 396 687 351 640 2.96e-40 157
Msa0859960 MtrunA17_Chr2g0297681 32.526 289 191 3 401 686 402 689 5.91e-40 156
Msa0859960 MtrunA17_Chr2g0284501 36.039 308 171 6 396 690 367 661 1.21e-39 155
Msa0859960 MtrunA17_Chr2g0297651 33.793 290 179 6 401 683 404 687 6.97e-39 153
Msa0859960 MtrunA17_Chr5g0439021 50.323 155 22 2 1 100 1 155 1.81e-37 138
Msa0859960 MtrunA17_Chr5g0443001 36.638 232 142 4 456 685 372 600 3.99e-37 147
Msa0859960 MtrunA17_Chr6g0456101 31.229 301 183 5 399 687 451 739 1.92e-35 143
Msa0859960 MtrunA17_Chr5g0410271 30.990 313 211 4 374 682 9 320 2.83e-35 136
Msa0859960 MtrunA17_Chr5g0410201 30.820 305 206 4 382 682 18 321 4.79e-35 135
Msa0859960 MtrunA17_Chr6g0457101 29.310 290 203 2 399 687 398 686 2.68e-34 139
Msa0859960 MtrunA17_Chr3g0098541 35.060 251 103 5 19 230 27 256 3.72e-34 134
Msa0859960 MtrunA17_Chr6g0456141 28.324 346 217 7 353 679 41 374 5.73e-34 134
Msa0859960 MtrunA17_Chr5g0410171 30.164 305 205 5 382 682 427 727 1.07e-33 137
Msa0859960 MtrunA17_Chr3g0100301 36.000 200 125 3 483 680 205 403 2.34e-33 133
Msa0859960 MtrunA17_Chr3g0098511 55.882 102 43 1 601 700 1 102 2.56e-33 123
Msa0859960 MtrunA17_Chr5g0410341 30.263 304 207 4 383 682 437 739 9.37e-33 135
Msa0859960 MtrunA17_Chr5g0410461 31.132 318 188 7 382 682 155 458 4.14e-32 130
Msa0859960 MtrunA17_Chr5g0410371 32.323 297 172 8 399 678 2 286 1.47e-30 122
Msa0859960 MtrunA17_Chr3g0100741 29.537 281 190 6 401 677 311 587 3.00e-30 126
Msa0859960 MtrunA17_Chr5g0410581 30.435 299 190 5 399 682 500 795 5.43e-30 126
Msa0859960 MtrunA17_Chr5g0410191 35.673 171 108 2 513 682 17 186 1.89e-29 115
Msa0859960 MtrunA17_Chr2g0297711 28.920 287 199 4 401 683 238 523 3.79e-29 122
Msa0859960 MtrunA17_Chr3g0096941 27.500 280 197 4 401 677 312 588 3.76e-26 114
Msa0859960 MtrunA17_Chr3g0098291 38.922 167 65 6 13 144 71 235 1.14e-23 100
Msa0859960 MtrunA17_Chr5g0410541 33.533 167 107 1 513 675 38 204 2.26e-22 96.3
Msa0859960 MtrunA17_Chr5g0410451 31.429 175 115 2 513 682 56 230 1.14e-19 89.0
Msa0859960 MtrunA17_Chr3g0098491 39.286 112 64 2 13 124 40 147 1.98e-18 82.8
Msa0859960 MtrunA17_Chr3g0098521 46.835 79 41 1 19 97 46 123 5.33e-18 81.6
Msa0859960 MtrunA17_Chr5g0410511 32.447 188 112 4 498 676 2 183 4.72e-17 80.5
Msa0859960 MtrunA17_Chr2g0297611 38.636 88 53 1 503 590 1 87 6.76e-16 73.6
Msa0859960 MtrunA17_Chr5g0410181 35.294 136 83 5 557 689 2 135 8.56e-16 74.7
Msa0859960 MtrunA17_Chr1g0211531 25.085 295 205 7 401 684 243 532 7.55e-14 74.7
Msa0859960 MtrunA17_Chr2g0297521 35.294 85 53 2 490 573 1 84 1.83e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0859960 AT3G18670.2 32.237 304 190 4 401 696 351 646 4.00e-39 154
Msa0859960 AT3G18670.1 32.566 304 189 5 401 696 296 591 4.14e-39 153
Msa0859960 AT5G04700.1 35.498 231 147 1 461 689 428 658 3.83e-38 151
Msa0859960 AT5G04690.1 35.065 231 146 2 461 689 386 614 8.08e-37 147
Msa0859960 AT5G04690.3 35.065 231 146 2 461 689 406 634 8.68e-37 147
Msa0859960 AT5G35810.1 31.699 306 179 7 396 681 31 326 8.84e-37 141
Msa0859960 AT5G04690.2 35.065 231 146 2 461 689 420 648 1.13e-36 147
Msa0859960 AT5G04730.1 30.990 313 192 5 382 683 286 585 7.22e-35 140
Msa0859960 AT3G54065.1 34.146 205 128 1 484 681 8 212 5.14e-33 127
Msa0859960 AT5G04680.3 32.500 240 150 3 461 689 401 639 5.60e-31 129
Msa0859960 AT5G04680.4 32.627 236 147 3 461 685 415 649 9.40e-31 129
Msa0859960 AT5G04680.1 32.627 236 147 3 461 685 444 678 9.92e-31 129
Msa0859960 AT5G04680.2 32.627 236 147 3 461 685 292 526 1.65e-30 127

Find 135 sgRNAs with CRISPR-Local

Find 694 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGTTCTTGTTTGTTCTTC+TGG 0.082164 5_4:-58453315 None:intergenic
ATCTTATTTGATGGATCTTC+TGG 0.123786 5_4:-58453292 None:intergenic
TTTGCCATTTCTTCGCTTAT+TGG 0.129842 5_4:+58456280 Msa0859960:CDS
TTGTTCGTTCTTCTTTAATT+TGG 0.141661 5_4:-58453224 None:intergenic
AAACAAGTTGTTGCGTAAAT+TGG 0.148570 5_4:-58456505 None:intergenic
GTCTTGTTTGATGGATCTTC+TGG 0.161596 5_4:-58453250 None:intergenic
AAAATATGTAAGTGTATTAT+TGG 0.191869 5_4:+58447496 Msa0859960:CDS
CGATCATTTGATGGATCTTC+TGG 0.196673 5_4:-58453193 None:intergenic
GGACTTTGCTTCTCTGTTAC+TGG 0.202594 5_4:+58456301 Msa0859960:CDS
TTCTTCTGGGTCTTGTTTGA+TGG 0.210847 5_4:-58453259 None:intergenic
AAATGATGTGGGATATAAAA+TGG 0.216030 5_4:+58455191 Msa0859960:CDS
GTACACACTCTTGGCCTTTC+GGG 0.218493 5_4:+58453406 Msa0859960:CDS
CGATCATTTGATGGATCTTC+TGG 0.224776 5_4:-58453136 None:intergenic
TGTTGTTCTTTAAATGTAAA+TGG 0.228887 5_4:-58453051 None:intergenic
TTATAAATTGTCACCTTTAT+CGG 0.270194 5_4:-58456611 None:intergenic
TTCTTCTGGATCTTATTTGA+TGG 0.275394 5_4:-58453301 None:intergenic
CTTGTTCGTTCTTCTTTAAA+AGG 0.281118 5_4:-58453111 None:intergenic
GTGGGATATAAAATGGTTTC+AGG 0.281361 5_4:+58455198 Msa0859960:CDS
TTGCAAAGTGACAATCTCTT+TGG 0.291225 5_4:-58447635 None:intergenic
ACAAAATCGACTTAAAATTA+TGG 0.305812 5_4:-58456480 None:intergenic
CGGTTGTGCCGCCGGGTACT+TGG 0.306931 5_4:-58456213 None:intergenic
TTTCAATGTCTCAACAATAA+GGG 0.308887 5_4:-58455026 None:intergenic
ATTGAAAACGAGAATGATTA+AGG 0.309215 5_4:+58455042 Msa0859960:CDS
CAAATCTCGACGAAAATCTT+TGG 0.312718 5_4:-58456365 None:intergenic
TTGCCACTGAAACTTCTTCT+TGG 0.320343 5_4:+58456385 Msa0859960:CDS
TGTACACACTCTTGGCCTTT+CGG 0.330829 5_4:+58453405 Msa0859960:CDS
GAATCCTGCTCCGTCGTATC+TGG 0.341785 5_4:+58456157 Msa0859960:CDS
TATAAAGTGGTATAGTTATC+TGG 0.344172 5_4:-58451538 None:intergenic
TTGGTGTGATTATGTTATGT+TGG 0.350614 5_4:+58456714 Msa0859960:three_prime_UTR
ATGAGTACTTACAGTGGTAT+AGG 0.361630 5_4:-58448684 None:intergenic
GGAAACAAAAGTTGACAAAA+AGG 0.370305 5_4:+58454865 Msa0859960:CDS
AAAGTGCAAGCAATCTTTCA+TGG 0.371144 5_4:+58448650 Msa0859960:CDS
TGGTGTGATTATGTTATGTT+GGG 0.371403 5_4:+58456715 Msa0859960:three_prime_UTR
GCAGGCTTGCCTTCTAATAC+TGG 0.371770 5_4:-58456247 None:intergenic
ATCACATTATATATGAGTTC+TGG 0.376179 5_4:+58456853 Msa0859960:three_prime_UTR
GACTGACTACGATCATTTGA+TGG 0.376806 5_4:-58453202 None:intergenic
GTTCCAACGGCAACCGATAA+AGG 0.377300 5_4:+58456598 Msa0859960:CDS
GGAGAATACAATATTGCATT+TGG 0.380804 5_4:+58455114 Msa0859960:CDS
GCCTTCATCGGTTGTGCCGC+CGG 0.385688 5_4:-58456221 None:intergenic
TATATCCCACATCATTTGTA+AGG 0.387340 5_4:-58455185 None:intergenic
TCTTGTTTGATGGATCTTCT+GGG 0.391484 5_4:-58453249 None:intergenic
AAGAGTTGAAGCATTGGAAA+TGG 0.394965 5_4:+58447420 Msa0859960:CDS
GGTAAACCTTGGCAGATTGC+TGG 0.400538 5_4:+58455157 Msa0859960:CDS
TGCCACTGAAACTTCTTCTT+GGG 0.402128 5_4:+58456386 Msa0859960:CDS
CCATTTATTTAAAGAGTTGA+AGG 0.402654 5_4:+58453706 Msa0859960:intron
AAATATGTAAGTGTATTATT+GGG 0.409620 5_4:+58447497 Msa0859960:CDS
CTTGGTTCTTGCAATGGATA+AGG 0.410815 5_4:+58455090 Msa0859960:CDS
ATAAAAGTGTTAACTTGATC+GGG 0.412779 5_4:-58447202 None:intergenic
AACAAGTTGTTGCGTAAATT+GGG 0.414969 5_4:-58456504 None:intergenic
GAGAAAGATGGAGGCTCGTC+CGG 0.415513 5_4:+58451495 Msa0859960:CDS
TCTTATTTGATGGATCTTCT+GGG 0.416382 5_4:-58453291 None:intergenic
TATAAAAGTGTTAACTTGAT+CGG 0.419601 5_4:-58447203 None:intergenic
CTTTGAGTTTGTGTCATGAA+TGG 0.419985 5_4:-58454963 None:intergenic
AGGACTCAAAAGAAGAACTT+TGG 0.420552 5_4:+58455062 Msa0859960:CDS
ATCGGTTGCCGTTGGAACCT+TGG 0.424011 5_4:-58456593 None:intergenic
TTGTTCGTTCTTCTTTAATG+TGG 0.426189 5_4:-58453167 None:intergenic
TCTATACTTTGATCTTGTAA+TGG 0.440450 5_4:+58456561 Msa0859960:CDS
AAGTCCAATAAGCGAAGAAA+TGG 0.440498 5_4:-58456284 None:intergenic
AACTTCATCTTGTTAGAATC+CGG 0.447300 5_4:-58451514 None:intergenic
GAATAACTTGGTTCTTGCAA+TGG 0.454265 5_4:+58455084 Msa0859960:CDS
TGTTCGTTCTTCTTTAATGT+GGG 0.454774 5_4:-58453166 None:intergenic
CTGCAAAGAAGAAGCACATA+TGG 0.460666 5_4:+58453738 Msa0859960:CDS
AGACTTGACAAATTCAAGAA+AGG 0.462199 5_4:-58453377 None:intergenic
ATTACAAGATCAAAGTATAG+AGG 0.462561 5_4:-58456559 None:intergenic
GATCATTTGATGGATCTTCT+GGG 0.464785 5_4:-58453192 None:intergenic
ATATTTCCAACACCACACTA+TGG 0.473758 5_4:-58456644 None:intergenic
AGAAGAACTTTGGAATAACT+TGG 0.475550 5_4:+58455072 Msa0859960:CDS
GTCGTATCTGGCCTTGTAGC+CGG 0.482864 5_4:+58456169 Msa0859960:CDS
GAAGGCAGTCCAGTATTAGA+AGG 0.486374 5_4:+58456238 Msa0859960:CDS
AAGGTCATATTTGAGAAAGA+TGG 0.486960 5_4:+58451483 Msa0859960:CDS
ATAAATCAATTACATCCTTC+CGG 0.495793 5_4:-58456811 None:intergenic
CCTTCATCGGTTGTGCCGCC+GGG 0.497322 5_4:-58456220 None:intergenic
ACTATCAACATTTGTTGTCA+TGG 0.500900 5_4:-58447155 None:intergenic
TTATAAAAGACAGCAGTGAC+TGG 0.507389 5_4:+58456119 Msa0859960:CDS
TCACCAGTGTATGCTGCATA+AGG 0.509931 5_4:-58453794 None:intergenic
ATGGCAAAGGCATCGAATGC+AGG 0.510886 5_4:-58456265 None:intergenic
ACTTTCATTTGGAGTTGATG+TGG 0.514012 5_4:-58454834 None:intergenic
AGTAGAAGTGTTGTGGTACA+AGG 0.516357 5_4:-58456036 None:intergenic
AGGCATACTTGTGGAACCAC+TGG 0.516535 5_4:+58451444 Msa0859960:intron
GGTTGACTACGATCATTTGA+TGG 0.519470 5_4:-58453145 None:intergenic
CGAAGGAAACACCGGCTACA+AGG 0.520059 5_4:-58456180 None:intergenic
AGAAAACAAATCATATAAAG+TGG 0.521131 5_4:-58451551 None:intergenic
TCTGCATATGTACACACTCT+TGG 0.522677 5_4:+58453397 Msa0859960:CDS
CCCGGCGGCACAACCGATGA+AGG 0.523089 5_4:+58456220 Msa0859960:CDS
TTCGAGAAGTGAGAATTGAA+AGG 0.531102 5_4:-58456336 None:intergenic
TTCAATGTCTCAACAATAAG+GGG 0.532327 5_4:-58455025 None:intergenic
TTGTTTGTTTCATTCTGCAG+TGG 0.532546 5_4:+58456439 Msa0859960:CDS
TACTTGGCTTGCTGTGGCGA+AGG 0.532602 5_4:-58456197 None:intergenic
TGATGAAAGAGTTGAAGCAT+TGG 0.540472 5_4:+58447414 Msa0859960:CDS
TAATACTGGACTGCCTTCAT+CGG 0.542610 5_4:-58456233 None:intergenic
AAGGCCAGATACGACGGAGC+AGG 0.546469 5_4:-58456161 None:intergenic
ACTCTTGGCCTTTCGGGAGT+AGG 0.548484 5_4:+58453412 Msa0859960:CDS
ATGGAGTAGTCAGCTGTTGA+AGG 0.548671 5_4:+58453757 Msa0859960:CDS
CATTTGGCAGCAGAGGCACT+AGG 0.552441 5_4:+58455130 Msa0859960:CDS
AATATTGCATTTGGCAGCAG+AGG 0.563757 5_4:+58455123 Msa0859960:CDS
TCACCTTTATCGGTTGCCGT+TGG 0.564575 5_4:-58456601 None:intergenic
GGCAGCAGAGGCACTAGGTG+AGG 0.564778 5_4:+58455135 Msa0859960:CDS
GTGTTTCCATAGTGTGGTGT+TGG 0.567001 5_4:+58456638 Msa0859960:three_prime_UTR
GTTCTAAAGTAGAAGTGTTG+TGG 0.567191 5_4:-58456043 None:intergenic
CTTTGTTCAGATGTGTGCTG+AGG 0.569842 5_4:-58448579 None:intergenic
AATCAAGTGTTTCCATAGTG+TGG 0.572101 5_4:+58456632 Msa0859960:exon
GCCAATTTAAGGCATACTTG+TGG 0.573810 5_4:+58451435 Msa0859960:intron
TGAAACAAACAATGAAGCAA+TGG 0.573882 5_4:-58456428 None:intergenic
TACTTTAGAACCAACAAAGA+GGG 0.578243 5_4:+58456055 Msa0859960:CDS
GAACGAGAGAAATATCCTGT+TGG 0.580654 5_4:+58453331 Msa0859960:CDS
TTACAAGATCAAAGTATAGA+GGG 0.582219 5_4:-58456558 None:intergenic
CATTTAAAGAACAACAAACA+AGG 0.582925 5_4:+58453058 Msa0859960:CDS
GGCTACAAGGCCAGATACGA+CGG 0.588972 5_4:-58456167 None:intergenic
CTACTTTAGAACCAACAAAG+AGG 0.590391 5_4:+58456054 Msa0859960:CDS
GTTCTGCCTTACAAATGATG+TGG 0.591145 5_4:+58455179 Msa0859960:CDS
GCCGGGTACTTGGCTTGCTG+TGG 0.591377 5_4:-58456203 None:intergenic
TGCTGTGGCGAAGGAAACAC+CGG 0.593416 5_4:-58456188 None:intergenic
GCCACAGCAAGCCAAGTACC+CGG 0.597454 5_4:+58456202 Msa0859960:CDS
GCAACAGCATAGAAAGTCAC+AGG 0.607145 5_4:-58456529 None:intergenic
TATGTCATATGCCATCAGTA+CGG 0.608187 5_4:+58451582 Msa0859960:CDS
GCAGCAGAGGCACTAGGTGA+GGG 0.608379 5_4:+58455136 Msa0859960:CDS
TTTGTGTCATGAATGGCGCT+TGG 0.609130 5_4:-58454956 None:intergenic
GGTTCTTGCAATGGATAAGG+AGG 0.610176 5_4:+58455093 Msa0859960:CDS
AGGCTGAATGTCTAGTGGCA+AGG 0.610828 5_4:-58448624 None:intergenic
AGACCTTATGCAGCATACAC+TGG 0.615007 5_4:+58453791 Msa0859960:CDS
AACCCAAGAAGAAGTTTCAG+TGG 0.615748 5_4:-58456388 None:intergenic
TTTGAAGGCTGAATGTCTAG+TGG 0.618261 5_4:-58448629 None:intergenic
CACTAGGTGAGGGTAAACCT+TGG 0.620947 5_4:+58455146 Msa0859960:CDS
GTCATATTTGAGAAAGATGG+AGG 0.625519 5_4:+58451486 Msa0859960:CDS
GCAGAACCAGCAATCTGCCA+AGG 0.638622 5_4:-58455163 None:intergenic
GGTGTGATTATGTTATGTTG+GGG 0.644922 5_4:+58456716 Msa0859960:three_prime_UTR
CTAGTGGCAAGGACTTTGAG+AGG 0.646141 5_4:-58448613 None:intergenic
TTCTGCCTTACAAATGATGT+GGG 0.657635 5_4:+58455180 Msa0859960:CDS
AATAAGCGAAGAAATGGCAA+AGG 0.660268 5_4:-58456278 None:intergenic
TTATTGGGAATAATAATGAG+AGG 0.673568 5_4:+58447512 Msa0859960:CDS
TATACATACCTACTCCCGAA+AGG 0.674378 5_4:-58453420 None:intergenic
TTGGAAATGGAGAATGAACG+TGG 0.678082 5_4:+58447433 Msa0859960:CDS
CTTGATGCAGCAAAATGCAA+TGG 0.679702 5_4:-58447463 None:intergenic
TGACTGGCTAAAAGACACGT+CGG 0.732129 5_4:+58456135 Msa0859960:CDS
ACAGCAAGCCAAGTACCCGG+CGG 0.744284 5_4:+58456205 Msa0859960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATAAATATAT+GGG - chr5_4:58448364-58448383 None:intergenic 0.0%
!! ATATATATATATATATATAT+GGG - chr5_4:58451070-58451089 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr5_4:58451071-58451090 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr5_4:58451071-58451090 Msa0859960:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr5_4:58451070-58451089 Msa0859960:intron 0.0%
!! TATATATATATATATATATA+GGG - chr5_4:58451071-58451090 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr5_4:58451070-58451089 None:intergenic 0.0%
!! TTATATTATAAAAAAAAAAT+TGG - chr5_4:58454478-58454497 None:intergenic 0.0%
!!! GTATATTTCTTTTTTTTTTT+TGG - chr5_4:58447843-58447862 None:intergenic 10.0%
!!! TATATATAGCTTATATTTTT+AGG + chr5_4:58447881-58447900 Msa0859960:intron 10.0%
!! AAATATAAAAACAAATGAAT+AGG - chr5_4:58448112-58448131 None:intergenic 10.0%
!! ATATTTATATATATATATCG+TGG + chr5_4:58448366-58448385 Msa0859960:intron 10.0%
!! TAATTAAAATTTAAATCTGA+TGG - chr5_4:58448851-58448870 None:intergenic 10.0%
!! TTAATTAATTAATCGATAAA+AGG - chr5_4:58449213-58449232 None:intergenic 10.0%
!! ATATATATATATATATATGG+GGG + chr5_4:58451116-58451135 Msa0859960:intron 10.0%
!! TATATATATATATATATAGG+GGG - chr5_4:58451382-58451401 None:intergenic 10.0%
!!! GTTATTTAAAATTAAGTTAT+GGG - chr5_4:58451740-58451759 None:intergenic 10.0%
!! AAAAAACAAATAAAGTTATT+TGG - chr5_4:58453010-58453029 None:intergenic 10.0%
!!! TTTTATTTGTATAATATTTC+GGG - chr5_4:58453622-58453641 None:intergenic 10.0%
!!! TAAATATCAGATTTTTTTTT+TGG + chr5_4:58454346-58454365 Msa0859960:intron 10.0%
!!! ACATATTTAAATATTTTCAT+TGG - chr5_4:58455964-58455983 None:intergenic 10.0%
!!! TTCTTTTTTTTTTTTTATCT+TGG + chr5_4:58455997-58456016 Msa0859960:intron 10.0%
!! AAAATATGTAAGTGTATTAT+TGG + chr5_4:58447496-58447515 Msa0859960:CDS 15.0%
!! AAATATGTAAGTGTATTATT+GGG + chr5_4:58447497-58447516 Msa0859960:CDS 15.0%
!!! TATTTCTTTTTTTTTTTTGG+TGG - chr5_4:58447840-58447859 None:intergenic 15.0%
!!! TTTAGGATGATTAATTTTTT+TGG + chr5_4:58447898-58447917 Msa0859960:intron 15.0%
!!! ATTTTAACCTTCTTTATATT+TGG + chr5_4:58448139-58448158 Msa0859960:intron 15.0%
!! TATTAATCCAAATATAAAGA+AGG - chr5_4:58448149-58448168 None:intergenic 15.0%
!! CCTATATATATATATATATG+GGG - chr5_4:58449524-58449543 None:intergenic 15.0%
!! CCCTATATATATATATATAT+GGG - chr5_4:58451381-58451400 None:intergenic 15.0%
!! CCCATATATATATATATATA+GGG + chr5_4:58449522-58449541 Msa0859960:intron 15.0%
!! ACCCTATATATATATATATA+TGG - chr5_4:58449526-58449545 None:intergenic 15.0%
!! CTAATTAAAAAAAATTGCTT+AGG - chr5_4:58450938-58450957 None:intergenic 15.0%
!!! CTAAGCAATTTTTTTTAATT+AGG + chr5_4:58450936-58450955 Msa0859960:intron 15.0%
!! TTGTTTATAATAGAAAAACA+TGG + chr5_4:58451280-58451299 Msa0859960:intron 15.0%
!! TGTTTATAATAGAAAAACAT+GGG + chr5_4:58451281-58451300 Msa0859960:intron 15.0%
!!! TATGATTTGTTTTCTATATT+TGG + chr5_4:58451559-58451578 Msa0859960:CDS 15.0%
!!! CGTTATTTAAAATTAAGTTA+TGG - chr5_4:58451741-58451760 None:intergenic 15.0%
!! GTTAACATTTAAAAAGATAA+AGG - chr5_4:58451800-58451819 None:intergenic 15.0%
!!! AATTTTTTTTAGCATGATTT+GGG + chr5_4:58452483-58452502 Msa0859960:intron 15.0%
!! GTATATAATAGAACATTATA+GGG - chr5_4:58452894-58452913 None:intergenic 15.0%
!!! AACTTTATTTGTTTTTTGTT+AGG + chr5_4:58453013-58453032 Msa0859960:intron 15.0%
!! AATATCAATTATACAAAAGT+AGG - chr5_4:58453511-58453530 None:intergenic 15.0%
!!! GAAATTACTTTTTTTTTTGA+AGG + chr5_4:58453536-58453555 Msa0859960:intron 15.0%
!! ATACAAATAAAATATAGGAT+AGG + chr5_4:58453630-58453649 Msa0859960:intron 15.0%
!!! AAACCTTTATAATATTTTTG+AGG + chr5_4:58454041-58454060 Msa0859960:intron 15.0%
!!! AACCTTTATAATATTTTTGA+GGG + chr5_4:58454042-58454061 Msa0859960:intron 15.0%
!!! TATACATGTACTTTTTTTTT+TGG + chr5_4:58454280-58454299 Msa0859960:intron 15.0%
!!! ATTTTTTTTTTGGTAAACTA+AGG + chr5_4:58454356-58454375 Msa0859960:intron 15.0%
!! AAAATCTTCATAATAACTTA+CGG + chr5_4:58455424-58455443 Msa0859960:intron 15.0%
!! ATATAGTTTATACATAAGTT+TGG + chr5_4:58455499-58455518 Msa0859960:intron 15.0%
!! TATAGTTTATACATAAGTTT+GGG + chr5_4:58455500-58455519 Msa0859960:intron 15.0%
!! TATATATTGAACAAAGATTT+GGG + chr5_4:58455667-58455686 Msa0859960:intron 15.0%
!!! TATAAAAGTGTTAACTTGAT+CGG - chr5_4:58447206-58447225 None:intergenic 20.0%
!! CTTTGCAATATAATATGTTA+TGG + chr5_4:58448517-58448536 Msa0859960:intron 20.0%
!! ATACATACATACATACATAT+AGG + chr5_4:58448768-58448787 Msa0859960:intron 20.0%
!! TACATACATACATACATATA+GGG + chr5_4:58448769-58448788 Msa0859960:intron 20.0%
!!! GATTTTCTATATCAATTACA+AGG - chr5_4:58448907-58448926 None:intergenic 20.0%
!! GAAAAAAGAAAAAAAAACGT+GGG - chr5_4:58449061-58449080 None:intergenic 20.0%
!! CCCCATATATATATATATAT+AGG + chr5_4:58449521-58449540 Msa0859960:intron 20.0%
!! TCAAATGATTAATATTTGCA+GGG - chr5_4:58450967-58450986 None:intergenic 20.0%
!! TTCAAATGATTAATATTTGC+AGG - chr5_4:58450966-58450985 None:intergenic 20.0%
!! ATTAAAAAAAATTGCTTAGG+TGG - chr5_4:58450935-58450954 None:intergenic 20.0%
!! TTCAAATGATTAATATTTGC+AGG + chr5_4:58450966-58450985 Msa0859960:intron 20.0%
!! TCAAATGATTAATATTTGCA+GGG + chr5_4:58450967-58450986 Msa0859960:intron 20.0%
!! AAAGTTTAATAGAGACAAAA+GGG - chr5_4:58451217-58451236 None:intergenic 20.0%
!! TAAAGTTTAATAGAGACAAA+AGG - chr5_4:58451218-58451237 None:intergenic 20.0%
!! AGAAAACAAATCATATAAAG+TGG - chr5_4:58451554-58451573 None:intergenic 20.0%
!! TAAGTATGTAAAAAGAAAGA+AGG + chr5_4:58451696-58451715 Msa0859960:intron 20.0%
!! CATTTAAAAAGATAAAGGAT+TGG - chr5_4:58452604-58452623 None:intergenic 20.0%
!!! ATTTTTGTTATGAATTTGCT+GGG - chr5_4:58452554-58452573 None:intergenic 20.0%
!! GAATTTATTATGAAGATTCT+GGG - chr5_4:58451928-58451947 None:intergenic 20.0%
!! TGAATTTATTATGAAGATTC+TGG - chr5_4:58451929-58451948 None:intergenic 20.0%
!! TAACTATGACAATTTCTATT+TGG + chr5_4:58452140-58452159 Msa0859960:intron 20.0%
!! AACTATGACAATTTCTATTT+GGG + chr5_4:58452141-58452160 Msa0859960:intron 20.0%
!!! GTTTTTTCTTAAGATTTGTT+AGG + chr5_4:58452371-58452390 Msa0859960:intron 20.0%
!!! GAATTTTTTTTAGCATGATT+TGG + chr5_4:58452482-58452501 Msa0859960:intron 20.0%
!!! TATTTTTGTTATGAATTTGC+TGG + chr5_4:58452553-58452572 Msa0859960:intron 20.0%
!!! ATTTTTGTTATGAATTTGCT+GGG + chr5_4:58452554-58452573 Msa0859960:intron 20.0%
!! GTTACCATTTAAAAAGATAA+AGG + chr5_4:58452599-58452618 Msa0859960:intron 20.0%
!!! CAATCCTTTATCTTTTTAAA+TGG - chr5_4:58451793-58451812 None:intergenic 20.0%
!! AAAAGATAAAGGATTGAAAT+CGG + chr5_4:58452610-58452629 Msa0859960:intron 20.0%
!! ATCGGAAAAAAATAAGATAA+AGG + chr5_4:58452628-58452647 Msa0859960:intron 20.0%
!! TTAATTAGTGAGATAAAGTT+AGG - chr5_4:58452844-58452863 None:intergenic 20.0%
!! GGTATATAATAGAACATTAT+AGG - chr5_4:58452895-58452914 None:intergenic 20.0%
!!! TTGTTTTTTGTTAGGAAAAA+TGG + chr5_4:58453021-58453040 Msa0859960:intron 20.0%
!! TGTTGTTCTTTAAATGTAAA+TGG - chr5_4:58453054-58453073 None:intergenic 20.0%
!!! AGAAAGGTTTCATAATTTTT+TGG - chr5_4:58453364-58453383 None:intergenic 20.0%
!! AATAAAATATAGGATAGGAT+AGG + chr5_4:58453635-58453654 Msa0859960:intron 20.0%
!! TGATTCTGATATGTATAAAA+TGG + chr5_4:58453844-58453863 Msa0859960:intron 20.0%
!! GATTCTGATATGTATAAAAT+GGG + chr5_4:58453845-58453864 Msa0859960:intron 20.0%
!! AACCCTCAAAAATATTATAA+AGG - chr5_4:58454047-58454066 None:intergenic 20.0%
!! TAGAAATTTGTATTAGGAAA+TGG - chr5_4:58454180-58454199 None:intergenic 20.0%
!! CAAACTTAGAAATTTGTATT+AGG - chr5_4:58454186-58454205 None:intergenic 20.0%
!!! TATATACCTTTGTTTGAAAT+GGG - chr5_4:58454262-58454281 None:intergenic 20.0%
!!! ATATATACCTTTGTTTGAAA+TGG - chr5_4:58454263-58454282 None:intergenic 20.0%
!! TATCAAAACTATCAATTTCA+TGG + chr5_4:58454430-58454449 Msa0859960:intron 20.0%
!!! TTTTATGAAAATAGCTAACA+TGG - chr5_4:58455408-58455427 None:intergenic 20.0%
!! ATAGTTTATACATAAGTTTG+GGG + chr5_4:58455501-58455520 Msa0859960:intron 20.0%
!! GTATATATTGAACAAAGATT+TGG + chr5_4:58455666-58455685 Msa0859960:intron 20.0%
!!! TAACAAATAATGGAGTAAAT+AGG - chr5_4:58455740-58455759 None:intergenic 20.0%
!! TATTTACTCCATTATTTGTT+AGG + chr5_4:58455739-58455758 Msa0859960:intron 20.0%
!!! TTAGTAAAACTTTTGCTTTA+TGG - chr5_4:58455801-58455820 None:intergenic 20.0%
!!! TTTGGGATTCATTTTTATTA+AGG - chr5_4:58455900-58455919 None:intergenic 20.0%
!!! CAATACTCAAACTTTTATTT+GGG - chr5_4:58455917-58455936 None:intergenic 20.0%
!!! ACAATACTCAAACTTTTATT+TGG - chr5_4:58455918-58455937 None:intergenic 20.0%
!!! ACAAAATCGACTTAAAATTA+TGG - chr5_4:58456483-58456502 None:intergenic 20.0%
!! TTATAAATTGTCACCTTTAT+CGG - chr5_4:58456614-58456633 None:intergenic 20.0%
!!! TTGTTTTGTTTTTGTTTTGT+TGG + chr5_4:58456695-58456714 Msa0859960:three_prime_UTR 20.0%
!!! TTTATTTTTATTTTACCGGA+AGG + chr5_4:58456796-58456815 Msa0859960:three_prime_UTR 20.0%
!!! ATAAAAGTGTTAACTTGATC+GGG - chr5_4:58447205-58447224 None:intergenic 25.0%
!! TTTTATAAGTGAGTACACAT+TGG + chr5_4:58447219-58447238 Msa0859960:intron 25.0%
!!! TGCAATTTTAACACATAATG+TGG + chr5_4:58447384-58447403 Msa0859960:intron 25.0%
!!! ATTTTAACACATAATGTGGA+AGG + chr5_4:58447388-58447407 Msa0859960:intron 25.0%
! TTATTGGGAATAATAATGAG+AGG + chr5_4:58447512-58447531 Msa0859960:CDS 25.0%
! TTGAGTCTTAAAAATGAACA+TGG + chr5_4:58447544-58447563 Msa0859960:CDS 25.0%
!!! TTTTTCAAGCTGCAATTAAT+TGG + chr5_4:58447578-58447597 Msa0859960:CDS 25.0%
!!! TTCTTTTTTTTTTTTGGTGG+TGG - chr5_4:58447837-58447856 None:intergenic 25.0%
!!! TGATTAATTTTTTTGGCACT+TGG + chr5_4:58447905-58447924 Msa0859960:intron 25.0%
! TTCATAGTTCTTTCACATTA+GGG + chr5_4:58448077-58448096 Msa0859960:intron 25.0%
! AATATGTTATGGAACAGATT+TGG + chr5_4:58448528-58448547 Msa0859960:intron 25.0%
! TCGTTTCTCATATAAGATAT+TGG - chr5_4:58449481-58449500 None:intergenic 25.0%
! TAGCGTAAAACCTAATTATT+TGG - chr5_4:58448973-58448992 None:intergenic 25.0%
!! TAATTAGGTTTTACGCTATT+AGG + chr5_4:58448975-58448994 Msa0859960:intron 25.0%
! GGAAAAAAGAAAAAAAAACG+TGG - chr5_4:58449062-58449081 None:intergenic 25.0%
! GGCAAAATCATATCATATTA+AGG - chr5_4:58449083-58449102 None:intergenic 25.0%
! ATGATAATTGGAACGATTAT+CGG - chr5_4:58449170-58449189 None:intergenic 25.0%
! ACAATCCTATACATGATAAT+TGG - chr5_4:58449182-58449201 None:intergenic 25.0%
! AACCTAATCTGGTAATTATT+TGG + chr5_4:58449314-58449333 Msa0859960:intron 25.0%
! ACAAATTGAGCTAAAAATCT+TGG - chr5_4:58449365-58449384 None:intergenic 25.0%
! TCGTTTCTCATATAAGATAT+TGG + chr5_4:58449481-58449500 Msa0859960:intron 25.0%
!!! TTGTTGATTTGGTTTTGATT+CGG - chr5_4:58450157-58450176 None:intergenic 25.0%
! TTGAGATTCAATCATATTCT+TGG - chr5_4:58450432-58450451 None:intergenic 25.0%
! GGTTTGAGAAATTGAATTAT+GGG + chr5_4:58450798-58450817 Msa0859960:intron 25.0%
! TTCAAATGACCTATAATTAC+AGG + chr5_4:58451026-58451045 Msa0859960:intron 25.0%
! TCAAATGACCTATAATTACA+GGG + chr5_4:58451027-58451046 Msa0859960:intron 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG - chr5_4:58451194-58451213 None:intergenic 25.0%
!!! TGTTTTGGTAAATAACTAGT+AGG + chr5_4:58451304-58451323 Msa0859960:intron 25.0%
!! ATTTGTTTGTTGCCAATTTA+AGG + chr5_4:58451424-58451443 Msa0859960:intron 25.0%
! TATAAAGTGGTATAGTTATC+TGG - chr5_4:58451541-58451560 None:intergenic 25.0%
! TGATACATCATCATAGATAT+TGG + chr5_4:58451652-58451671 Msa0859960:intron 25.0%
!!! ATAGATATTGGTTCCTTAAA+AGG + chr5_4:58451664-58451683 Msa0859960:intron 25.0%
!! CTTAAGTTATTGTCCTTTTA+AGG - chr5_4:58451680-58451699 None:intergenic 25.0%
! ATGGGGAAAAAATAAGATAA+AGG - chr5_4:58451771-58451790 None:intergenic 25.0%
! AAAAGATAAAGGATTGGAAT+GGG - chr5_4:58451789-58451808 None:intergenic 25.0%
! AAAAAGATAAAGGATTGGAA+TGG - chr5_4:58451790-58451809 None:intergenic 25.0%
!!! GATTTTTGTTATGAATTTGC+TGG - chr5_4:58451847-58451866 None:intergenic 25.0%
! TTTGCTGGGTTTAAAAAAAA+AGG + chr5_4:58452568-58452587 Msa0859960:intron 25.0%
! GTCACCTAAAATTAAGTTAT+GGG + chr5_4:58452659-58452678 Msa0859960:intron 25.0%
!! TAGTCCCATAACTTAATTTT+AGG - chr5_4:58451733-58451752 None:intergenic 25.0%
! TAATAACCAAGGTTACAAAA+AGG - chr5_4:58452731-58452750 None:intergenic 25.0%
!!! TTTTTTTCTTCTTCGAAACA+TGG - chr5_4:58452916-58452935 None:intergenic 25.0%
! CATTTAAAGAACAACAAACA+AGG + chr5_4:58453058-58453077 Msa0859960:CDS 25.0%
! TTGTTCGTTCTTCTTTAATT+TGG - chr5_4:58453227-58453246 None:intergenic 25.0%
! AAAGTAGACGCTAATTAATA+TGG - chr5_4:58453452-58453471 None:intergenic 25.0%
!!! TAATTAGCGTCTACTTTTTT+TGG + chr5_4:58453455-58453474 Msa0859960:intron 25.0%
!!! TACTTTTTTTGGATTACAAG+AGG + chr5_4:58453466-58453485 Msa0859960:intron 25.0%
! CCTTCAACTCTTTAAATAAA+TGG - chr5_4:58453709-58453728 None:intergenic 25.0%
! CCATTTATTTAAAGAGTTGA+AGG + chr5_4:58453706-58453725 Msa0859960:intron 25.0%
! TGAAATGGGGATAAAAAATA+GGG - chr5_4:58454248-58454267 None:intergenic 25.0%
! TTGAAATGGGGATAAAAAAT+AGG - chr5_4:58454249-58454268 None:intergenic 25.0%
!! ATATACCTTTGTTTGAAATG+GGG - chr5_4:58454261-58454280 None:intergenic 25.0%
!!! GGAAAATCCAATTTTTTCAA+GGG - chr5_4:58454522-58454541 None:intergenic 25.0%
!!! TGGAAAATCCAATTTTTTCA+AGG - chr5_4:58454523-58454542 None:intergenic 25.0%
!!! GAAAATGTTTAACTTTTCCA+AGG - chr5_4:58454572-58454591 None:intergenic 25.0%
! AAATATGAAATTGTGTTTCG+AGG - chr5_4:58454618-58454637 None:intergenic 25.0%
! AGATGAAAAACAAGAACAAA+AGG + chr5_4:58454793-58454812 Msa0859960:intron 25.0%
! TCCAAATGAAAGTAAAAAGA+AGG + chr5_4:58454844-58454863 Msa0859960:CDS 25.0%
!! TCCTTCTTTTTACTTTCATT+TGG - chr5_4:58454848-58454867 None:intergenic 25.0%
! AAAAAATGGAATAGTTGAAC+TGG + chr5_4:58454910-58454929 Msa0859960:CDS 25.0%
! TTTCAATGTCTCAACAATAA+GGG - chr5_4:58455029-58455048 None:intergenic 25.0%
!! TTTTCAATGTCTCAACAATA+AGG - chr5_4:58455030-58455049 None:intergenic 25.0%
! ATTGAAAACGAGAATGATTA+AGG + chr5_4:58455042-58455061 Msa0859960:CDS 25.0%
! AAATGATGTGGGATATAAAA+TGG + chr5_4:58455191-58455210 Msa0859960:CDS 25.0%
! TATACACAATCTTCCTAATT+TGG + chr5_4:58455628-58455647 Msa0859960:intron 25.0%
! ATACACAATCTTCCTAATTT+GGG + chr5_4:58455629-58455648 Msa0859960:intron 25.0%
! ATTCTTCACCTAACAAATAA+TGG - chr5_4:58455750-58455769 None:intergenic 25.0%
! TTACAAGATCAAAGTATAGA+GGG - chr5_4:58456561-58456580 None:intergenic 25.0%
! ATTACAAGATCAAAGTATAG+AGG - chr5_4:58456562-58456581 None:intergenic 25.0%
! TCTATACTTTGATCTTGTAA+TGG + chr5_4:58456561-58456580 Msa0859960:CDS 25.0%
! ATAAATCAATTACATCCTTC+CGG - chr5_4:58456814-58456833 None:intergenic 25.0%
ATTACATGTAGCCATAGATT+TGG + chr5_4:58447330-58447349 Msa0859960:intron 30.0%
TTAATTGCAGCTTGAAAAAG+AGG - chr5_4:58447577-58447596 None:intergenic 30.0%
ATTTACCGAAATATTCTCCT+CGG - chr5_4:58447705-58447724 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG + chr5_4:58447793-58447812 Msa0859960:intron 30.0%
!!! TTTTTTTTTTTGGTGGTGGT+CGG - chr5_4:58447833-58447852 None:intergenic 30.0%
! TATTAGCATCTTTTTGTCTG+TGG + chr5_4:58447947-58447966 Msa0859960:intron 30.0%
CTTCATAGTTCTTTCACATT+AGG + chr5_4:58448076-58448095 Msa0859960:intron 30.0%
ATATATATCGTGGATCAAAC+AGG + chr5_4:58448376-58448395 Msa0859960:intron 30.0%
GTATTAATGAGTACTTACAG+TGG - chr5_4:58448693-58448712 None:intergenic 30.0%
!! TATAAGATATTGGTTCTCAC+TGG - chr5_4:58449491-58449510 None:intergenic 30.0%
AACAAATTGTGCTACAATCT+TGG + chr5_4:58448934-58448953 Msa0859960:intron 30.0%
AATTAGCGCTCCAAATAATT+AGG + chr5_4:58448960-58448979 Msa0859960:intron 30.0%
! CTTTCTTAAAAGAGTGCAAA+TGG - chr5_4:58449104-58449123 None:intergenic 30.0%
TCGTTCCAATTATCATGTAT+AGG + chr5_4:58449174-58449193 Msa0859960:intron 30.0%
! AAAGGTTTGAGATTTGGAAA+TGG + chr5_4:58449260-58449279 Msa0859960:intron 30.0%
CTCCAAATAATTACCAGATT+AGG - chr5_4:58449319-58449338 None:intergenic 30.0%
TACCCGTTAATTAAATCTGA+TGG + chr5_4:58449442-58449461 Msa0859960:intron 30.0%
AGCCATCAGATTTAATTAAC+GGG - chr5_4:58449447-58449466 None:intergenic 30.0%
CAGCCATCAGATTTAATTAA+CGG - chr5_4:58449448-58449467 None:intergenic 30.0%
!! TATAAGATATTGGTTCTCAC+CGG + chr5_4:58449491-58449510 Msa0859960:intron 30.0%
TCAAATGACCTATAATTGCA+GGG - chr5_4:58449565-58449584 None:intergenic 30.0%
TTCAAATGACCTATAATTGC+AGG - chr5_4:58449566-58449585 None:intergenic 30.0%
AATATTTGCAGGGACAAAAT+GGG - chr5_4:58450977-58450996 None:intergenic 30.0%
TAATATTTGCAGGGACAAAA+TGG - chr5_4:58450976-58450995 None:intergenic 30.0%
TTATGAAATTGAGAGAGATG+TGG - chr5_4:58449995-58450014 None:intergenic 30.0%
AAGTTCTTCTCTCAGATTAT+TGG + chr5_4:58450051-58450070 Msa0859960:intron 30.0%
AAACCAAACCCAAATCAAAA+AGG + chr5_4:58450125-58450144 Msa0859960:intron 30.0%
AACCAAACCCAAATCAAAAA+GGG + chr5_4:58450126-58450145 Msa0859960:intron 30.0%
!! TGGATAATTTTGAGAGAACA+AGG - chr5_4:58450302-58450321 None:intergenic 30.0%
AAGTTTGTGAACAAAAGAGA+TGG - chr5_4:58450322-58450341 None:intergenic 30.0%
!! CTTTGAAATGAGAAACTTGT+TGG + chr5_4:58450642-58450661 Msa0859960:intron 30.0%
TTGGGATTTGTGAATGATTT+AGG + chr5_4:58450678-58450697 Msa0859960:intron 30.0%
TGGGATTTGTGAATGATTTA+GGG + chr5_4:58450679-58450698 Msa0859960:intron 30.0%
! TGAATGATTTAGGGGTTTTT+GGG + chr5_4:58450688-58450707 Msa0859960:intron 30.0%
TTGGGTTATTATTGTTGCAT+TGG + chr5_4:58450706-58450725 Msa0859960:intron 30.0%
GGGTTTGAGAAATTGAATTA+TGG + chr5_4:58450797-58450816 Msa0859960:intron 30.0%
TTGAGAAATTGAATTATGGG+AGG + chr5_4:58450801-58450820 Msa0859960:intron 30.0%
TGAGAAATTGAATTATGGGA+GGG + chr5_4:58450802-58450821 Msa0859960:intron 30.0%
AAAAAAATTGCTTAGGTGGA+TGG - chr5_4:58450931-58450950 None:intergenic 30.0%
TAATATTTGCAGGGACAAAA+TGG + chr5_4:58450976-58450995 Msa0859960:intron 30.0%
AATATTTGCAGGGACAAAAT+GGG + chr5_4:58450977-58450996 Msa0859960:intron 30.0%
! TTTTTCGTCCCTGTAATTAT+AGG - chr5_4:58451038-58451057 None:intergenic 30.0%
! ATAGAAAAACATGGGTGTTT+TGG + chr5_4:58451289-58451308 Msa0859960:intron 30.0%
!!! TATGACCTTATTGTTTTTGC+AGG - chr5_4:58451472-58451491 None:intergenic 30.0%
AAGGTCATATTTGAGAAAGA+TGG + chr5_4:58451483-58451502 Msa0859960:CDS 30.0%
AACTTCATCTTGTTAGAATC+CGG - chr5_4:58451517-58451536 None:intergenic 30.0%
AAAGATAAAGGATTGGAATG+GGG - chr5_4:58451788-58451807 None:intergenic 30.0%
! TTGCTGGGTTTTTGTAAAAA+AGG - chr5_4:58451831-58451850 None:intergenic 30.0%
AAAACACAAACCAAAACGAA+CGG - chr5_4:58452331-58452350 None:intergenic 30.0%
CAGGTTTGTATTGAAATAGA+GGG - chr5_4:58452405-58452424 None:intergenic 30.0%
CTCTATTTCAATACAAACCT+GGG + chr5_4:58452404-58452423 Msa0859960:intron 30.0%
!! TTTAGCATGATTTGGGTTTT+TGG + chr5_4:58452490-58452509 Msa0859960:intron 30.0%
!!! GATTTGGGTTTTTGGTTTTT+TGG + chr5_4:58452498-58452517 Msa0859960:intron 30.0%
!! CTTAATTTTAGGTGACGTTT+TGG - chr5_4:58452655-58452674 None:intergenic 30.0%
CGTCACCTAAAATTAAGTTA+TGG + chr5_4:58452658-58452677 Msa0859960:intron 30.0%
GACATAAGCTAATTCTTTCT+TGG - chr5_4:58452703-58452722 None:intergenic 30.0%
! TATTATTTACCCGTGAGTTT+TGG + chr5_4:58452746-58452765 Msa0859960:intron 30.0%
TGACTTTGCATTATGTTGTA+CGG - chr5_4:58452792-58452811 None:intergenic 30.0%
AGTTAAAGTTGTTGGATTCT+AGG - chr5_4:58452960-58452979 None:intergenic 30.0%
ACACACATAGTTAAAGTTGT+TGG - chr5_4:58452968-58452987 None:intergenic 30.0%
AACTTTAACTATGTGTGTCA+CGG + chr5_4:58452970-58452989 Msa0859960:intron 30.0%
!!! AGGTTTTTTGTGTCATTTGA+TGG - chr5_4:58453094-58453113 None:intergenic 30.0%
CTTGTTCGTTCTTCTTTAAA+AGG - chr5_4:58453114-58453133 None:intergenic 30.0%
TGTTCGTTCTTCTTTAATGT+GGG - chr5_4:58453169-58453188 None:intergenic 30.0%
TTGTTCGTTCTTCTTTAATG+TGG - chr5_4:58453170-58453189 None:intergenic 30.0%
! TCTTATTTGATGGATCTTCT+GGG - chr5_4:58453294-58453313 None:intergenic 30.0%
! ATCTTATTTGATGGATCTTC+TGG - chr5_4:58453295-58453314 None:intergenic 30.0%
! TTCTTCTGGATCTTATTTGA+TGG - chr5_4:58453304-58453323 None:intergenic 30.0%
!!! TTTTTTGGCAAAAATCCAAC+AGG - chr5_4:58453349-58453368 None:intergenic 30.0%
AGACTTGACAAATTCAAGAA+AGG - chr5_4:58453380-58453399 None:intergenic 30.0%
ACAAAAGTAGGCACTAATTT+CGG - chr5_4:58453499-58453518 None:intergenic 30.0%
AAATATAGGATAGGATAGGA+TGG + chr5_4:58453639-58453658 Msa0859960:intron 30.0%
TTTATCCCCATTTCAAACAA+AGG + chr5_4:58454253-58454272 Msa0859960:intron 30.0%
GATTGTTCCCTTGAAAAAAT+TGG + chr5_4:58454512-58454531 Msa0859960:intron 30.0%
AGTTCATGGGAAAATATGAT+TGG - chr5_4:58454543-58454562 None:intergenic 30.0%
TGTAAGATGTGTTCATGTAA+CGG - chr5_4:58454684-58454703 None:intergenic 30.0%
TTACATGAACACATCTTACA+AGG + chr5_4:58454684-58454703 Msa0859960:intron 30.0%
TACATGAACACATCTTACAA+GGG + chr5_4:58454685-58454704 Msa0859960:intron 30.0%
GGAAACAAAAGTTGACAAAA+AGG + chr5_4:58454865-58454884 Msa0859960:CDS 30.0%
!!! TTTTTTGCTGCAACCAAAAA+TGG - chr5_4:58454896-58454915 None:intergenic 30.0%
!!! TTTTTGGTTGCAGCAAAAAA+TGG + chr5_4:58454896-58454915 Msa0859960:CDS 30.0%
TTCAATGTCTCAACAATAAG+GGG - chr5_4:58455028-58455047 None:intergenic 30.0%
!! AGAAGAACTTTGGAATAACT+TGG + chr5_4:58455072-58455091 Msa0859960:CDS 30.0%
GGAGAATACAATATTGCATT+TGG + chr5_4:58455114-58455133 Msa0859960:CDS 30.0%
TATATCCCACATCATTTGTA+AGG - chr5_4:58455188-58455207 None:intergenic 30.0%
!! ATGTCGGATTGACTTATTTT+AGG + chr5_4:58455323-58455342 Msa0859960:intron 30.0%
TTAAAAAAGGAAGGATGAAG+TGG + chr5_4:58455552-58455571 Msa0859960:intron 30.0%
ATATTGAACAAAGATTTGGG+AGG + chr5_4:58455670-58455689 Msa0859960:intron 30.0%
TATTGAACAAAGATTTGGGA+GGG + chr5_4:58455671-58455690 Msa0859960:intron 30.0%
!! TACTTTAGAACCAACAAAGA+GGG + chr5_4:58456055-58456074 Msa0859960:CDS 30.0%
! TGATATTTTTCCCTCTTTGT+TGG - chr5_4:58456068-58456087 None:intergenic 30.0%
TGAAACAAACAATGAAGCAA+TGG - chr5_4:58456431-58456450 None:intergenic 30.0%
AACAAGTTGTTGCGTAAATT+GGG - chr5_4:58456507-58456526 None:intergenic 30.0%
AAACAAGTTGTTGCGTAAAT+TGG - chr5_4:58456508-58456527 None:intergenic 30.0%
!!! TGTAATGGCTATTTTAACCA+AGG + chr5_4:58456576-58456595 Msa0859960:CDS 30.0%
!!! TATTTTAACCAAGGTTCCAA+CGG + chr5_4:58456585-58456604 Msa0859960:CDS 30.0%
TTGGTGTGATTATGTTATGT+TGG + chr5_4:58456714-58456733 Msa0859960:three_prime_UTR 30.0%
TGGTGTGATTATGTTATGTT+GGG + chr5_4:58456715-58456734 Msa0859960:three_prime_UTR 30.0%
ATAAGTGAGTACACATTGGA+AGG + chr5_4:58447223-58447242 Msa0859960:intron 35.0%
AGTACACATTGGAAGGAAAA+TGG + chr5_4:58447230-58447249 Msa0859960:intron 35.0%
GTACACATTGGAAGGAAAAT+GGG + chr5_4:58447231-58447250 Msa0859960:intron 35.0%
ATCTTCTTCGTCCAAATCTA+TGG - chr5_4:58447344-58447363 None:intergenic 35.0%
TGATGAAAGAGTTGAAGCAT+TGG + chr5_4:58447414-58447433 Msa0859960:CDS 35.0%
!! AAGAGTTGAAGCATTGGAAA+TGG + chr5_4:58447420-58447439 Msa0859960:CDS 35.0%
! ATTGCATTTTGCTGCATCAA+GGG + chr5_4:58447465-58447484 Msa0859960:CDS 35.0%
TTGCAAAGTGACAATCTCTT+TGG - chr5_4:58447638-58447657 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG + chr5_4:58447798-58447817 Msa0859960:intron 35.0%
!!! TTTTTTTTTTGGTGGTGGTC+GGG - chr5_4:58447832-58447851 None:intergenic 35.0%
TAGTTCTTTCACATTAGGGA+TGG + chr5_4:58448081-58448100 Msa0859960:intron 35.0%
ATAAAGTACGAAACCCGTTA+GGG - chr5_4:58448251-58448270 None:intergenic 35.0%
!! TAACGGGTTTCGTACTTTAT+CGG + chr5_4:58448251-58448270 Msa0859960:intron 35.0%
! AAGATTGCTTGCACTTTTGA+AGG - chr5_4:58448647-58448666 None:intergenic 35.0%
AAAGTGCAAGCAATCTTTCA+TGG + chr5_4:58448650-58448669 Msa0859960:CDS 35.0%
ATGAGTACTTACAGTGGTAT+AGG - chr5_4:58448687-58448706 None:intergenic 35.0%
!! TAGTGTTACTTGCTGATTTG+AGG + chr5_4:58449236-58449255 Msa0859960:intron 35.0%
!! AGTGTTACTTGCTGATTTGA+GGG + chr5_4:58449237-58449256 Msa0859960:intron 35.0%
! AGAAAGCGTAAAACCTAATC+TGG + chr5_4:58449303-58449322 Msa0859960:intron 35.0%
! ATATATATGGGGAGCATATC+CGG - chr5_4:58449513-58449532 None:intergenic 35.0%
! TTTTTCGTCCCTGCAATTAT+AGG + chr5_4:58449554-58449573 Msa0859960:intron 35.0%
GTCAGTAATCAAACGAGATT+AGG - chr5_4:58449656-58449675 None:intergenic 35.0%
TTAGTCACATAAAAGTGACG+TGG + chr5_4:58449687-58449706 Msa0859960:intron 35.0%
GAAGAAGAGATGGAGAATAA+GGG - chr5_4:58449780-58449799 None:intergenic 35.0%
AATTGAGAGAGATGTGGTTA+TGG - chr5_4:58449989-58450008 None:intergenic 35.0%
AGTTGAAGAAGAAGAGAGTA+CGG - chr5_4:58450093-58450112 None:intergenic 35.0%
!! TTGATTTGGGTTTGGTTTGA+AGG - chr5_4:58450123-58450142 None:intergenic 35.0%
!!! AACCCTTTTTGATTTGGGTT+TGG - chr5_4:58450131-58450150 None:intergenic 35.0%
AATCTCAATAACGACATGAG+AGG + chr5_4:58450444-58450463 Msa0859960:intron 35.0%
!! TGAGAAACTTGTTGGTGATT+TGG + chr5_4:58450650-58450669 Msa0859960:intron 35.0%
!! GAGAAACTTGTTGGTGATTT+GGG + chr5_4:58450651-58450670 Msa0859960:intron 35.0%
GGGATTTGTGAATGATTTAG+GGG + chr5_4:58450680-58450699 Msa0859960:intron 35.0%
! GTGAATGATTTAGGGGTTTT+TGG + chr5_4:58450687-58450706 Msa0859960:intron 35.0%
!! ATTGAGTTCTAGGTGTTGAT+GGG + chr5_4:58450777-58450796 Msa0859960:intron 35.0%
AAATTGAATTATGGGAGGGT+GGG + chr5_4:58450806-58450825 Msa0859960:intron 35.0%
AGAAGAAGAGAAAGAGAATG+AGG + chr5_4:58450877-58450896 Msa0859960:intron 35.0%
GAAGAAGAGAAAGAGAATGA+GGG + chr5_4:58450878-58450897 Msa0859960:intron 35.0%
AGAATGAGGGAAGAAGATAT+GGG + chr5_4:58450891-58450910 Msa0859960:intron 35.0%
GGAAGAAGATATGGGTAAAA+TGG + chr5_4:58450899-58450918 Msa0859960:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr5_4:58451339-58451358 None:intergenic 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + chr5_4:58451339-58451358 Msa0859960:intron 35.0%
TCCACAAGTATGCCTTAAAT+TGG - chr5_4:58451439-58451458 None:intergenic 35.0%
TGGATCCTGCAAAAACAATA+AGG + chr5_4:58451464-58451483 Msa0859960:CDS 35.0%
GTCATATTTGAGAAAGATGG+AGG + chr5_4:58451486-58451505 Msa0859960:CDS 35.0%
TATGTCATATGCCATCAGTA+CGG + chr5_4:58451582-58451601 Msa0859960:CDS 35.0%
ACCAATAAAAACCGTACTGA+TGG - chr5_4:58451596-58451615 None:intergenic 35.0%
! GAGTTTGTTTAGTTGAGTGA+TGG - chr5_4:58452048-58452067 None:intergenic 35.0%
AGAGATAGATAAGGATGAGA+AGG + chr5_4:58452104-58452123 Msa0859960:intron 35.0%
CCAGGTTTGTATTGAAATAG+AGG - chr5_4:58452406-58452425 None:intergenic 35.0%
CCTCTATTTCAATACAAACC+TGG + chr5_4:58452403-58452422 Msa0859960:intron 35.0%
!!! CGACAAGGTCATTTTTTTTC+TGG + chr5_4:58452460-58452479 Msa0859960:intron 35.0%
! CAAAAGCCTTTTTGTAACCT+TGG + chr5_4:58452722-58452741 Msa0859960:intron 35.0%
TCACGGGTAAATAATAACCA+AGG - chr5_4:58452742-58452761 None:intergenic 35.0%
GGTAACTTGATTCTTGTAGT+CGG - chr5_4:58452873-58452892 None:intergenic 35.0%
! GATCATTTGATGGATCTTCT+GGG - chr5_4:58453138-58453157 None:intergenic 35.0%
! TCTTGTTTGATGGATCTTCT+GGG - chr5_4:58453252-58453271 None:intergenic 35.0%
!!! TGGGTTTTGTTCTTTCTTCT+GGG - chr5_4:58453275-58453294 None:intergenic 35.0%
GAATCAATTTCCGTATCAGT+TGG - chr5_4:58453830-58453849 None:intergenic 35.0%
TTTCCTTAACTAGTGTCCTT+AGG - chr5_4:58454084-58454103 None:intergenic 35.0%
!! AAAGAGTGCTCTTAGAACAT+TGG - chr5_4:58454218-58454237 None:intergenic 35.0%
TCCAAGGATTCAAAGTTCAT+GGG - chr5_4:58454556-58454575 None:intergenic 35.0%
TTCCAAGGATTCAAAGTTCA+TGG - chr5_4:58454557-58454576 None:intergenic 35.0%
TTGTGTTTCGAGGACTTTAT+GGG - chr5_4:58454608-58454627 None:intergenic 35.0%
ATTGTGTTTCGAGGACTTTA+TGG - chr5_4:58454609-58454628 None:intergenic 35.0%
TATGTGTTTGAGGACGATTA+GGG - chr5_4:58454733-58454752 None:intergenic 35.0%
ATATGTGTTTGAGGACGATT+AGG - chr5_4:58454734-58454753 None:intergenic 35.0%
ATGCCATTCATATGTGTTTG+AGG - chr5_4:58454743-58454762 None:intergenic 35.0%
ATCTGCAATGTCAAATGCAA+TGG - chr5_4:58454777-58454796 None:intergenic 35.0%
!! ACTTTCATTTGGAGTTGATG+TGG - chr5_4:58454837-58454856 None:intergenic 35.0%
! CAAAAAGGAGACACCATTTT+TGG + chr5_4:58454880-58454899 Msa0859960:CDS 35.0%
! CTTTGAGTTTGTGTCATGAA+TGG - chr5_4:58454966-58454985 None:intergenic 35.0%
AGGACTCAAAAGAAGAACTT+TGG + chr5_4:58455062-58455081 Msa0859960:CDS 35.0%
! GAATAACTTGGTTCTTGCAA+TGG + chr5_4:58455084-58455103 Msa0859960:CDS 35.0%
TTCTGCCTTACAAATGATGT+GGG + chr5_4:58455180-58455199 Msa0859960:CDS 35.0%
GTGGGATATAAAATGGTTTC+AGG + chr5_4:58455198-58455217 Msa0859960:CDS 35.0%
CTATCGACATAACATTTGTG+AGG + chr5_4:58455350-58455369 Msa0859960:intron 35.0%
! ACATAAGTTTGGGGTATGTT+TGG + chr5_4:58455510-58455529 Msa0859960:intron 35.0%
! CATAAGTTTGGGGTATGTTT+GGG + chr5_4:58455511-58455530 Msa0859960:intron 35.0%
!!! AGGAGGGTTTTAAAAAAGGA+AGG + chr5_4:58455543-58455562 Msa0859960:intron 35.0%
TGGAAGAAATTGAGGACTTT+GGG + chr5_4:58455572-58455591 Msa0859960:intron 35.0%
!! GTTCTAAAGTAGAAGTGTTG+TGG - chr5_4:58456046-58456065 None:intergenic 35.0%
!! CTACTTTAGAACCAACAAAG+AGG + chr5_4:58456054-58456073 Msa0859960:CDS 35.0%
TTATAAAAGACAGCAGTGAC+TGG + chr5_4:58456119-58456138 Msa0859960:CDS 35.0%
AATAAGCGAAGAAATGGCAA+AGG - chr5_4:58456281-58456300 None:intergenic 35.0%
! TTTGCCATTTCTTCGCTTAT+TGG + chr5_4:58456280-58456299 Msa0859960:CDS 35.0%
AAGTCCAATAAGCGAAGAAA+TGG - chr5_4:58456287-58456306 None:intergenic 35.0%
TTCGAGAAGTGAGAATTGAA+AGG - chr5_4:58456339-58456358 None:intergenic 35.0%
CAAATCTCGACGAAAATCTT+TGG - chr5_4:58456368-58456387 None:intergenic 35.0%
TTGTTTGTTTCATTCTGCAG+TGG + chr5_4:58456439-58456458 Msa0859960:CDS 35.0%
AATCAAGTGTTTCCATAGTG+TGG + chr5_4:58456632-58456651 Msa0859960:exon 35.0%
ATATTTCCAACACCACACTA+TGG - chr5_4:58456647-58456666 None:intergenic 35.0%
GGTGTGATTATGTTATGTTG+GGG + chr5_4:58456716-58456735 Msa0859960:three_prime_UTR 35.0%
TTGGAAATGGAGAATGAACG+TGG + chr5_4:58447433-58447452 Msa0859960:CDS 40.0%
CTTGATGCAGCAAAATGCAA+TGG - chr5_4:58447466-58447485 None:intergenic 40.0%
! CATTGCATTTTGCTGCATCA+AGG + chr5_4:58447464-58447483 Msa0859960:CDS 40.0%
! TTGCATTTTGCTGCATCAAG+GGG + chr5_4:58447466-58447485 Msa0859960:CDS 40.0%
CAAGATCTTGTTCGAGAAGA+TGG + chr5_4:58447655-58447674 Msa0859960:intron 40.0%
GAAATATTCTCCTCGGATAG+CGG - chr5_4:58447698-58447717 None:intergenic 40.0%
GCTATCCGAGGAGAATATTT+CGG + chr5_4:58447697-58447716 Msa0859960:intron 40.0%
GCATAATATATGCAAGGTCC+GGG + chr5_4:58447799-58447818 Msa0859960:intron 40.0%
CATAATATATGCAAGGTCCG+GGG + chr5_4:58447800-58447819 Msa0859960:intron 40.0%
GAGATTTCAGATTCGAACTC+AGG - chr5_4:58448020-58448039 None:intergenic 40.0%
ACAACCTAGAGCTGTCAAAA+CGG + chr5_4:58448201-58448220 Msa0859960:intron 40.0%
GATAAAGTACGAAACCCGTT+AGG - chr5_4:58448252-58448271 None:intergenic 40.0%
! AACGGGTTTCGTACTTTATC+GGG + chr5_4:58448252-58448271 Msa0859960:intron 40.0%
CAAAAATCCTGGTCGAAAAC+CGG + chr5_4:58448281-58448300 Msa0859960:intron 40.0%
AAAAATCCTGGTCGAAAACC+GGG + chr5_4:58448282-58448301 Msa0859960:intron 40.0%
TTTGAAGGCTGAATGTCTAG+TGG - chr5_4:58448632-58448651 None:intergenic 40.0%
CGGTGAGGATAAACAAGATT+GGG - chr5_4:58449150-58449169 None:intergenic 40.0%
TCGGTGAGGATAAACAAGAT+TGG - chr5_4:58449151-58449170 None:intergenic 40.0%
AATTGGAACGATTATCGGTG+AGG - chr5_4:58449165-58449184 None:intergenic 40.0%
!! TACTTGCTGATTTGAGGGAA+AGG + chr5_4:58449242-58449261 Msa0859960:intron 40.0%
! TGAGGGAAAGGTTTGAGATT+TGG + chr5_4:58449254-58449273 Msa0859960:intron 40.0%
ATCTCGTTTGATTACTGACG+TGG + chr5_4:58449657-58449676 Msa0859960:intron 40.0%
AGATGGAGAATAAGGGAAGA+AGG - chr5_4:58449773-58449792 None:intergenic 40.0%
GGAAGAAGAGATGGAGAATA+AGG - chr5_4:58449781-58449800 None:intergenic 40.0%
AAGTGAGAGTAAGAAAGGGA+AGG - chr5_4:58449802-58449821 None:intergenic 40.0%
TAAAGAAAAAAGCGAACCCG+CGG - chr5_4:58450032-58450051 None:intergenic 40.0%
TCTCAGATTATTGGAACCCT+TGG + chr5_4:58450060-58450079 Msa0859960:intron 40.0%
! GTTGAAGAAGAAGAGAGTAC+GGG - chr5_4:58450092-58450111 None:intergenic 40.0%
!! TTTGGGTTTGGTTTGAAGGA+AGG - chr5_4:58450119-58450138 None:intergenic 40.0%
!!! GGCGAAACCCTTTTTGATTT+GGG - chr5_4:58450136-58450155 None:intergenic 40.0%
! GTTGTGATGCGTTGTTGATT+TGG - chr5_4:58450168-58450187 None:intergenic 40.0%
GTTTGTGGTACGAATTGGAA+GGG - chr5_4:58450548-58450567 None:intergenic 40.0%
AGTTTGTGGTACGAATTGGA+AGG - chr5_4:58450549-58450568 None:intergenic 40.0%
GTACAGTTTGTGGTACGAAT+TGG - chr5_4:58450553-58450572 None:intergenic 40.0%
!! ATCACGTGAGTTGATACACA+AGG + chr5_4:58450593-58450612 Msa0859960:intron 40.0%
!! TCACGTGAGTTGATACACAA+GGG + chr5_4:58450594-58450613 Msa0859960:intron 40.0%
!! TGTTGGTGATTTGGGTGAAT+TGG + chr5_4:58450659-58450678 Msa0859960:intron 40.0%
!! GTTGGTGATTTGGGTGAATT+GGG + chr5_4:58450660-58450679 Msa0859960:intron 40.0%
! GGAGTTGTTGTTGTTGTTGT+TGG + chr5_4:58450727-58450746 Msa0859960:intron 40.0%
! GTTGTTGTTGTTGTTGGTGA+AGG + chr5_4:58450733-58450752 Msa0859960:intron 40.0%
GAAGGTTGAGATTGAGTTCT+AGG + chr5_4:58450767-58450786 Msa0859960:intron 40.0%
!! GATTGAGTTCTAGGTGTTGA+TGG + chr5_4:58450776-58450795 Msa0859960:intron 40.0%
GAAATTGAATTATGGGAGGG+TGG + chr5_4:58450805-58450824 Msa0859960:intron 40.0%
GAGAATGAGGGAAGAAGATA+TGG + chr5_4:58450890-58450909 Msa0859960:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr5_4:58451343-58451362 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr5_4:58451342-58451361 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + chr5_4:58451342-58451361 Msa0859960:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + chr5_4:58451343-58451362 Msa0859960:intron 40.0%
! GCCAATTTAAGGCATACTTG+TGG + chr5_4:58451435-58451454 Msa0859960:intron 40.0%
!!! ATTGTTTTTGCAGGATCCAG+TGG - chr5_4:58451463-58451482 None:intergenic 40.0%
! GCCATCAGTACGGTTTTTAT+TGG + chr5_4:58451592-58451611 Msa0859960:CDS 40.0%
! TGTTTAGTTGAGTGATGGTG+AGG - chr5_4:58452043-58452062 None:intergenic 40.0%
CACGCACAAAGAGACAATAA+CGG - chr5_4:58452080-58452099 None:intergenic 40.0%
GTTATTGTCTCTTTGTGCGT+GGG + chr5_4:58452079-58452098 Msa0859960:intron 40.0%
ACAATTTCTATTTGGGCCAG+CGG + chr5_4:58452148-58452167 Msa0859960:intron 40.0%
TCGTGACTTTCTGTCTCTTT+CGG - chr5_4:58452180-58452199 None:intergenic 40.0%
! CGATCATTTGATGGATCTTC+TGG - chr5_4:58453139-58453158 None:intergenic 40.0%
GGTTGACTACGATCATTTGA+TGG - chr5_4:58453148-58453167 None:intergenic 40.0%
! CGATCATTTGATGGATCTTC+TGG - chr5_4:58453139-58453158 None:intergenic 40.0%
GACTGACTACGATCATTTGA+TGG - chr5_4:58453205-58453224 None:intergenic 40.0%
!! GTCTTGTTTGATGGATCTTC+TGG - chr5_4:58453253-58453272 None:intergenic 40.0%
!! TTCTTCTGGGTCTTGTTTGA+TGG - chr5_4:58453262-58453281 None:intergenic 40.0%
!!! CTGGGTTTTGTTCTTTCTTC+TGG - chr5_4:58453276-58453295 None:intergenic 40.0%
! CTCGTTCTTGTTTGTTCTTC+TGG - chr5_4:58453318-58453337 None:intergenic 40.0%
GAACGAGAGAAATATCCTGT+TGG + chr5_4:58453331-58453350 Msa0859960:CDS 40.0%
TCTGCATATGTACACACTCT+TGG + chr5_4:58453397-58453416 Msa0859960:CDS 40.0%
TATACATACCTACTCCCGAA+AGG - chr5_4:58453423-58453442 None:intergenic 40.0%
! CTGCAAAGAAGAAGCACATA+TGG + chr5_4:58453738-58453757 Msa0859960:CDS 40.0%
CATGTGAACGCAACTAAAAG+TGG + chr5_4:58453893-58453912 Msa0859960:intron 40.0%
TGTCCTAAGGACACTAGTTA+AGG + chr5_4:58454078-58454097 Msa0859960:intron 40.0%
TCCCATGAACTTTGAATCCT+TGG + chr5_4:58454552-58454571 Msa0859960:intron 40.0%
ATTTATCGCGACATGTTCCA+TGG + chr5_4:58454641-58454660 Msa0859960:intron 40.0%
TTTATCGCGACATGTTCCAT+GGG + chr5_4:58454642-58454661 Msa0859960:intron 40.0%
TCAGATTTGTATGTGTCCCA+TGG - chr5_4:58454661-58454680 None:intergenic 40.0%
! TTAGGGTTTAGGGTTTCAAG+AGG - chr5_4:58454716-58454735 None:intergenic 40.0%
TTGAGGACGATTAGGGTTTA+GGG - chr5_4:58454726-58454745 None:intergenic 40.0%
TTTGAGGACGATTAGGGTTT+AGG - chr5_4:58454727-58454746 None:intergenic 40.0%
CGTCCTCAAACACATATGAA+TGG + chr5_4:58454737-58454756 Msa0859960:intron 40.0%
GCAATGTCAAATGCAATGGA+AGG - chr5_4:58454773-58454792 None:intergenic 40.0%
! CTTGGTTCTTGCAATGGATA+AGG + chr5_4:58455090-58455109 Msa0859960:CDS 40.0%
AATATTGCATTTGGCAGCAG+AGG + chr5_4:58455123-58455142 Msa0859960:CDS 40.0%
GTTCTGCCTTACAAATGATG+TGG + chr5_4:58455179-58455198 Msa0859960:CDS 40.0%
! TTGGGGTATGTTTGGGATTT+AGG + chr5_4:58455518-58455537 Msa0859960:intron 40.0%
! GTATGTTTGGGATTTAGGAG+AGG + chr5_4:58455523-58455542 Msa0859960:intron 40.0%
!!! GGAGAGGAGGGTTTTAAAAA+AGG + chr5_4:58455539-58455558 Msa0859960:intron 40.0%
GGATGAAGTGGAAGAAATTG+AGG + chr5_4:58455564-58455583 Msa0859960:intron 40.0%
GTGGAAGAAATTGAGGACTT+TGG + chr5_4:58455571-58455590 Msa0859960:intron 40.0%
AAGAAATTGAGGACTTTGGG+AGG + chr5_4:58455575-58455594 Msa0859960:intron 40.0%
! AGAAATTGAGGACTTTGGGA+GGG + chr5_4:58455576-58455595 Msa0859960:intron 40.0%
CACAATCTTCCTAATTTGGG+AGG + chr5_4:58455632-58455651 Msa0859960:intron 40.0%
!! CTTTTGAGTCCTCCCAAATT+AGG - chr5_4:58455644-58455663 None:intergenic 40.0%
!! AGTAGAAGTGTTGTGGTACA+AGG - chr5_4:58456039-58456058 None:intergenic 40.0%
TAATACTGGACTGCCTTCAT+CGG - chr5_4:58456236-58456255 None:intergenic 40.0%
TTGCCACTGAAACTTCTTCT+TGG + chr5_4:58456385-58456404 Msa0859960:CDS 40.0%
TGCCACTGAAACTTCTTCTT+GGG + chr5_4:58456386-58456405 Msa0859960:CDS 40.0%
AACCCAAGAAGAAGTTTCAG+TGG - chr5_4:58456391-58456410 None:intergenic 40.0%
! AGTGCTTTGTGAGCTTGTTC+TGG - chr5_4:58447286-58447305 None:intergenic 45.0%
GCACTTATCTCTGAATCAGC+TGG + chr5_4:58447301-58447320 Msa0859960:intron 45.0%
TGAGCATAGCTCAGTTGGTT+TGG + chr5_4:58447771-58447790 Msa0859960:intron 45.0%
CGAACTCAGGTGAAGATGTT+CGG - chr5_4:58448007-58448026 None:intergenic 45.0%
CAACCTAGAGCTGTCAAAAC+GGG + chr5_4:58448202-58448221 Msa0859960:intron 45.0%
!!! TTCGACCAGGATTTTTGGTC+CGG - chr5_4:58448278-58448297 None:intergenic 45.0%
! CGGTTTTCGACCAGGATTTT+TGG - chr5_4:58448283-58448302 None:intergenic 45.0%
CGGGTAGTATATTTCAAGCC+CGG - chr5_4:58448303-58448322 None:intergenic 45.0%
TGAAATATACTACCCGAGCC+CGG + chr5_4:58448307-58448326 Msa0859960:intron 45.0%
CTTTGTTCAGATGTGTGCTG+AGG - chr5_4:58448582-58448601 None:intergenic 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG - chr5_4:58450996-58451015 None:intergenic 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG - chr5_4:58450995-58451014 None:intergenic 45.0%
ATTTGCAGGGACAAAATGGG+AGG - chr5_4:58450980-58450999 None:intergenic 45.0%
GGCACAAGCTGATTGGTAAA+AGG + chr5_4:58449708-58449727 Msa0859960:intron 45.0%
AGAATAAGGGAAGAAGGCAG+GGG - chr5_4:58449767-58449786 None:intergenic 45.0%
GAGAATAAGGGAAGAAGGCA+GGG - chr5_4:58449768-58449787 None:intergenic 45.0%
GAAAGGGAAGGAAGAAGAGA+TGG - chr5_4:58449790-58449809 None:intergenic 45.0%
CCGGAAGTGAGAGTAAGAAA+GGG - chr5_4:58449806-58449825 None:intergenic 45.0%
CCCTTTCTTACTCTCACTTC+CGG + chr5_4:58449803-58449822 Msa0859960:intron 45.0%
TCCGGAAGTGAGAGTAAGAA+AGG - chr5_4:58449807-58449826 None:intergenic 45.0%
ACGAAGAGAGGGAAGAAGAA+CGG - chr5_4:58449830-58449849 None:intergenic 45.0%
ATGCAAGAGTTCGATGGTGT+TGG - chr5_4:58449905-58449924 None:intergenic 45.0%
! GTGTTGATGCAAGAGTTCGA+TGG - chr5_4:58449911-58449930 None:intergenic 45.0%
ATGGAAGAGATGGACAAGGT+TGG - chr5_4:58449936-58449955 None:intergenic 45.0%
TGAGAGAGATGTGGTTATGG+TGG - chr5_4:58449986-58450005 None:intergenic 45.0%
!! CGGCGAAACCCTTTTTGATT+TGG - chr5_4:58450137-58450156 None:intergenic 45.0%
! GTGTTGTTGTTGCTGCGAAT+CGG - chr5_4:58450370-58450389 None:intergenic 45.0%
GCAGCAACAACAACACTTTC+CGG + chr5_4:58450374-58450393 Msa0859960:intron 45.0%
ACGAATTGGAAGGGAACTTC+TGG - chr5_4:58450539-58450558 None:intergenic 45.0%
TTGCACGTCTGTACAGTTTG+TGG - chr5_4:58450563-58450582 None:intergenic 45.0%
ACAAACTGTACAGACGTGCA+AGG + chr5_4:58450562-58450581 Msa0859960:intron 45.0%
CAAACTGTACAGACGTGCAA+GGG + chr5_4:58450563-58450582 Msa0859960:intron 45.0%
! TACTGGTTGTGGTGGTGAAA+CGG + chr5_4:58450832-58450851 Msa0859960:intron 45.0%
ATTTGCAGGGACAAAATGGG+AGG + chr5_4:58450980-58450999 Msa0859960:intron 45.0%
! TGGGAGGATTAGTAAGCTCA+TGG + chr5_4:58450996-58451015 Msa0859960:intron 45.0%
GCACCCACCTAAAAACACTA+AGG + chr5_4:58451149-58451168 Msa0859960:intron 45.0%
GCACCCACCTAAAAACACTA+AGG - chr5_4:58451149-58451168 None:intergenic 45.0%
CGTTATTGTCTCTTTGTGCG+TGG + chr5_4:58452078-58452097 Msa0859960:intron 45.0%
ACACAAACCAAAACGAACGG+CGG - chr5_4:58452328-58452347 None:intergenic 45.0%
TGAAGGGGATCCAAAACTCA+CGG - chr5_4:58452759-58452778 None:intergenic 45.0%
! TGTACACACTCTTGGCCTTT+CGG + chr5_4:58453405-58453424 Msa0859960:CDS 45.0%
GTAGGCACTAATTTCGGCTT+TGG - chr5_4:58453493-58453512 None:intergenic 45.0%
ATGGAGTAGTCAGCTGTTGA+AGG + chr5_4:58453757-58453776 Msa0859960:CDS 45.0%
AGACCTTATGCAGCATACAC+TGG + chr5_4:58453791-58453810 Msa0859960:CDS 45.0%
TCACCAGTGTATGCTGCATA+AGG - chr5_4:58453797-58453816 None:intergenic 45.0%
TATGCAGCATACACTGGTGA+CGG + chr5_4:58453797-58453816 Msa0859960:intron 45.0%
TTATGCTGACCAGTGTCCTA+AGG + chr5_4:58454065-58454084 Msa0859960:intron 45.0%
AACTAGTGTCCTTAGGACAC+TGG - chr5_4:58454077-58454096 None:intergenic 45.0%
TTTGTGTCATGAATGGCGCT+TGG - chr5_4:58454959-58454978 None:intergenic 45.0%
GGTTCTTGCAATGGATAAGG+AGG + chr5_4:58455093-58455112 Msa0859960:CDS 45.0%
! TGTTTGGGATTTAGGAGAGG+AGG + chr5_4:58455526-58455545 Msa0859960:intron 45.0%
! GTTTGGGATTTAGGAGAGGA+GGG + chr5_4:58455527-58455546 Msa0859960:intron 45.0%
! GAAATTGAGGACTTTGGGAG+GGG + chr5_4:58455577-58455596 Msa0859960:intron 45.0%
! AAATTGAGGACTTTGGGAGG+GGG + chr5_4:58455578-58455597 Msa0859960:intron 45.0%
AAAGATTTGGGAGGGTTTGC+AGG + chr5_4:58455679-58455698 Msa0859960:intron 45.0%
AAGATTTGGGAGGGTTTGCA+GGG + chr5_4:58455680-58455699 Msa0859960:intron 45.0%
! TGACTGGCTAAAAGACACGT+CGG + chr5_4:58456135-58456154 Msa0859960:CDS 45.0%
GAAGGCAGTCCAGTATTAGA+AGG + chr5_4:58456238-58456257 Msa0859960:CDS 45.0%
GGACTTTGCTTCTCTGTTAC+TGG + chr5_4:58456301-58456320 Msa0859960:CDS 45.0%
GCAACAGCATAGAAAGTCAC+AGG - chr5_4:58456532-58456551 None:intergenic 45.0%
GTGTTTCCATAGTGTGGTGT+TGG + chr5_4:58456638-58456657 Msa0859960:three_prime_UTR 45.0%
!! GATATATATATATAAATATA+TGG - chr5_4:58448365-58448384 None:intergenic 5.0%
!! TATATATATATATATATATG+GGG + chr5_4:58451115-58451134 Msa0859960:intron 5.0%
!!! TAAACTTTATTTTAATTAAA+AGG + chr5_4:58451229-58451248 Msa0859960:intron 5.0%
!! ATATATATATATATATATAG+GGG - chr5_4:58451393-58451412 None:intergenic 5.0%
!!! ATTTTATTTGTATAATATTT+CGG - chr5_4:58453623-58453642 None:intergenic 5.0%
!! ATATTATACAAATAAAATAT+AGG + chr5_4:58453625-58453644 Msa0859960:intron 5.0%
!!! ACAAAATATAATAATTTTTA+TGG + chr5_4:58454385-58454404 Msa0859960:intron 5.0%
!!! TTTTTTTTATATAACTTAAA+AGG - chr5_4:58455460-58455479 None:intergenic 5.0%
!!! AATTTTTATTTTTATTTTAC+CGG + chr5_4:58456792-58456811 Msa0859960:three_prime_UTR 5.0%
ATTCTTCACACCGCTATCCG+AGG + chr5_4:58447685-58447704 Msa0859960:intron 50.0%
!! TAGCCCGTTTTGACAGCTCT+AGG - chr5_4:58448208-58448227 None:intergenic 50.0%
GGTTTCGTACTTTATCGGGC+CGG + chr5_4:58448256-58448275 Msa0859960:intron 50.0%
CTAGTGGCAAGGACTTTGAG+AGG - chr5_4:58448616-58448635 None:intergenic 50.0%
AGGCTGAATGTCTAGTGGCA+AGG - chr5_4:58448627-58448646 None:intergenic 50.0%
GGAGAATAAGGGAAGAAGGC+AGG - chr5_4:58449769-58449788 None:intergenic 50.0%
GGTGGAAGAGAACGAAGAGA+GGG - chr5_4:58449841-58449860 None:intergenic 50.0%
TGGTGGAAGAGAACGAAGAG+AGG - chr5_4:58449842-58449861 None:intergenic 50.0%
!! GTGTTGGTGGTGGAAGAGAT+TGG - chr5_4:58449889-58449908 None:intergenic 50.0%
! CAAGAGTTCGATGGTGTTGG+TGG - chr5_4:58449902-58449921 None:intergenic 50.0%
!! GGTGATGGAAGAGATGGACA+AGG - chr5_4:58449940-58449959 None:intergenic 50.0%
!! GGTGTTGGTGATGGAAGAGA+TGG - chr5_4:58449946-58449965 None:intergenic 50.0%
!! AGATGTGGTTATGGTGGTGG+TGG - chr5_4:58449980-58449999 None:intergenic 50.0%
GAGAGATGTGGTTATGGTGG+TGG - chr5_4:58449983-58450002 None:intergenic 50.0%
TAAACGCTTCTCCAACACCG+CGG + chr5_4:58450012-58450031 Msa0859960:intron 50.0%
AGAGTACGGGTAGTGACCAA+GGG - chr5_4:58450079-58450098 None:intergenic 50.0%
ACAACACTTTCCGGCATGAG+AGG + chr5_4:58450383-58450402 Msa0859960:intron 50.0%
TTTCCGGCATGAGAGGTTTG+CGG + chr5_4:58450390-58450409 Msa0859960:intron 50.0%
AAACCGCAAACCTCTCATGC+CGG - chr5_4:58450396-58450415 None:intergenic 50.0%
! TTGTTGGTGAAGGAGCCAGT+TGG + chr5_4:58450743-58450762 Msa0859960:intron 50.0%
! TGTTGGTGAAGGAGCCAGTT+GGG + chr5_4:58450744-58450763 Msa0859960:intron 50.0%
CAATCTCAACCTTCCCCAAC+TGG - chr5_4:58450761-58450780 None:intergenic 50.0%
! TGGTGGTGAAACGGAAGGAT+AGG + chr5_4:58450841-58450860 Msa0859960:intron 50.0%
GGTGGTGAAACGGAAGGATA+GGG + chr5_4:58450842-58450861 Msa0859960:intron 50.0%
TGAAACGGAAGGATAGGGAG+AGG + chr5_4:58450847-58450866 Msa0859960:intron 50.0%
GAAACGGAAGGATAGGGAGA+GGG + chr5_4:58450848-58450867 Msa0859960:intron 50.0%
AGGCATACTTGTGGAACCAC+TGG + chr5_4:58451444-58451463 Msa0859960:intron 50.0%
TGAGGTTGTTGTGGAAGAGG+TGG - chr5_4:58452025-58452044 None:intergenic 50.0%
TGGTGAGGTTGTTGTGGAAG+AGG - chr5_4:58452028-58452047 None:intergenic 50.0%
! GAGTGATGGTGAGGTTGTTG+TGG - chr5_4:58452034-58452053 None:intergenic 50.0%
GCGTGGGAGAGAGATAGATA+AGG + chr5_4:58452095-58452114 Msa0859960:intron 50.0%
ATTTCTATTTGGGCCAGCGG+CGG + chr5_4:58452151-58452170 Msa0859960:intron 50.0%
AGTCACGAGAGAGAGAAGTG+AGG + chr5_4:58452192-58452211 Msa0859960:intron 50.0%
GAGAGAGAGAAGTGAGGTTG+AGG + chr5_4:58452198-58452217 Msa0859960:intron 50.0%
TTGAGGACGAGACAGACATC+TGG + chr5_4:58452215-58452234 Msa0859960:intron 50.0%
TGAGGACGAGACAGACATCT+GGG + chr5_4:58452216-58452235 Msa0859960:intron 50.0%
CTCTCCATCTCTCTTCAGTG+AGG + chr5_4:58452427-58452446 Msa0859960:intron 50.0%
ACTGCCTCACTGAAGAGAGA+TGG - chr5_4:58452434-58452453 None:intergenic 50.0%
ATCTCTCTTCAGTGAGGCAG+TGG + chr5_4:58452433-58452452 Msa0859960:intron 50.0%
GAAGGGGATCCAAAACTCAC+GGG - chr5_4:58452758-58452777 None:intergenic 50.0%
TACGGTGCACATAGCTGAAG+GGG - chr5_4:58452774-58452793 None:intergenic 50.0%
GTACGGTGCACATAGCTGAA+GGG - chr5_4:58452775-58452794 None:intergenic 50.0%
TGTACGGTGCACATAGCTGA+AGG - chr5_4:58452776-58452795 None:intergenic 50.0%
! GTACACACTCTTGGCCTTTC+GGG + chr5_4:58453406-58453425 Msa0859960:CDS 50.0%
CGGTGGTCAACCAACTGATA+CGG + chr5_4:58453817-58453836 Msa0859960:intron 50.0%
CACTAGGTGAGGGTAAACCT+TGG + chr5_4:58455146-58455165 Msa0859960:CDS 50.0%
GGTAAACCTTGGCAGATTGC+TGG + chr5_4:58455157-58455176 Msa0859960:CDS 50.0%
CTTAAACCCCATGCGCATGT+CGG + chr5_4:58455307-58455326 Msa0859960:intron 50.0%
AGTCAATCCGACATGCGCAT+GGG - chr5_4:58455317-58455336 None:intergenic 50.0%
AAGTCAATCCGACATGCGCA+TGG - chr5_4:58455318-58455337 None:intergenic 50.0%
! AATTGAGGACTTTGGGAGGG+GGG + chr5_4:58455579-58455598 Msa0859960:intron 50.0%
GCAGGCTTGCCTTCTAATAC+TGG - chr5_4:58456250-58456269 None:intergenic 50.0%
!! ATGGCAAAGGCATCGAATGC+AGG - chr5_4:58456268-58456287 None:intergenic 50.0%
GTTCCAACGGCAACCGATAA+AGG + chr5_4:58456598-58456617 Msa0859960:CDS 50.0%
! TCACCTTTATCGGTTGCCGT+TGG - chr5_4:58456604-58456623 None:intergenic 50.0%
CCAACTGAGCTATGCTCACG+CGG - chr5_4:58447769-58447788 None:intergenic 55.0%
!! AGCTGTCAAAACGGGCTACC+CGG + chr5_4:58448210-58448229 Msa0859960:intron 55.0%
AGTACGAAACCCGTTAGGGC+CGG - chr5_4:58448247-58448266 None:intergenic 55.0%
! TTCAAGCCCGGTTTTCGACC+AGG - chr5_4:58448291-58448310 None:intergenic 55.0%
GTGACGTGGCACAAGCTGAT+TGG + chr5_4:58449701-58449720 Msa0859960:intron 55.0%
GAGAGGGAAGAAGAACGGTC+CGG - chr5_4:58449825-58449844 None:intergenic 55.0%
GAAGAGATTGGCGTCGTTGG+TGG - chr5_4:58449877-58449896 None:intergenic 55.0%
GTGGAAGAGATTGGCGTCGT+TGG - chr5_4:58449880-58449899 None:intergenic 55.0%
!! GAGTTCGATGGTGTTGGTGG+TGG - chr5_4:58449899-58449918 None:intergenic 55.0%
!! GTTCGACGAGGTGTTGGTGA+TGG - chr5_4:58449955-58449974 None:intergenic 55.0%
GTGGTAGTTCGACGAGGTGT+TGG - chr5_4:58449961-58449980 None:intergenic 55.0%
AAACGCTTCTCCAACACCGC+GGG + chr5_4:58450013-58450032 Msa0859960:intron 55.0%
AAAAAGCGAACCCGCGGTGT+TGG - chr5_4:58450026-58450045 None:intergenic 55.0%
! GAGAGTACGGGTAGTGACCA+AGG - chr5_4:58450080-58450099 None:intergenic 55.0%
CTTCTCAACAACGCCATCGC+CGG + chr5_4:58450192-58450211 Msa0859960:intron 55.0%
! GTTGGTGAAGGAGCCAGTTG+GGG + chr5_4:58450745-58450764 Msa0859960:intron 55.0%
! GGTTGTGGTGGTGAAACGGA+AGG + chr5_4:58450836-58450855 Msa0859960:intron 55.0%
GAGAAAGATGGAGGCTCGTC+CGG + chr5_4:58451495-58451514 Msa0859960:CDS 55.0%
GTGGTGAGGCGAAAGAGGTT+GGG - chr5_4:58452268-58452287 None:intergenic 55.0%
!! CGATGGTGATGGAGGAACGA+CGG - chr5_4:58452299-58452318 None:intergenic 55.0%
CAAACCAAAACGAACGGCGG+CGG - chr5_4:58452325-58452344 None:intergenic 55.0%
TGAAGAGAGATGGAGAGCCC+AGG - chr5_4:58452424-58452443 None:intergenic 55.0%
TGAGGCAGTGGTCAACGACA+AGG + chr5_4:58452445-58452464 Msa0859960:intron 55.0%
ATGTGTGTCACGGTCGTTGC+AGG + chr5_4:58452980-58452999 Msa0859960:intron 55.0%
! ACTCTTGGCCTTTCGGGAGT+AGG + chr5_4:58453412-58453431 Msa0859960:CDS 55.0%
!! CATTTGGCAGCAGAGGCACT+AGG + chr5_4:58455130-58455149 Msa0859960:CDS 55.0%
GCAGAACCAGCAATCTGCCA+AGG - chr5_4:58455166-58455185 None:intergenic 55.0%
GTCAATCCGACATGCGCATG+GGG - chr5_4:58455316-58455335 None:intergenic 55.0%
GAATCCTGCTCCGTCGTATC+TGG + chr5_4:58456157-58456176 Msa0859960:CDS 55.0%
GGCTACAAGGCCAGATACGA+CGG - chr5_4:58456170-58456189 None:intergenic 55.0%
!! GTCGTATCTGGCCTTGTAGC+CGG + chr5_4:58456169-58456188 Msa0859960:CDS 55.0%
! CGAAGGAAACACCGGCTACA+AGG - chr5_4:58456183-58456202 None:intergenic 55.0%
TGCTGTGGCGAAGGAAACAC+CGG - chr5_4:58456191-58456210 None:intergenic 55.0%
!! TACTTGGCTTGCTGTGGCGA+AGG - chr5_4:58456200-58456219 None:intergenic 55.0%
ATCGGTTGCCGTTGGAACCT+TGG - chr5_4:58456596-58456615 None:intergenic 55.0%
CCGCGTGAGCATAGCTCAGT+TGG + chr5_4:58447766-58447785 Msa0859960:intron 60.0%
TCGGGCCGGACCAAAAATCC+TGG + chr5_4:58448270-58448289 Msa0859960:intron 60.0%
!! GTTGGTGGTGGTGGTACTGG+TGG - chr5_4:58449862-58449881 None:intergenic 60.0%
!! GTCGTTGGTGGTGGTGGTAC+TGG - chr5_4:58449865-58449884 None:intergenic 60.0%
!! ATTGGCGTCGTTGGTGGTGG+TGG - chr5_4:58449871-58449890 None:intergenic 60.0%
! GAGATTGGCGTCGTTGGTGG+TGG - chr5_4:58449874-58449893 None:intergenic 60.0%
!! GTGGTGGTGGTAGTTCGACG+AGG - chr5_4:58449967-58449986 None:intergenic 60.0%
ACACTGTCGACGAACACCGC+CGG - chr5_4:58450214-58450233 None:intergenic 60.0%
GTGAAGGAGCCAGTTGGGGA+AGG + chr5_4:58450749-58450768 Msa0859960:intron 60.0%
! TATGGGAGGGTGGGTGCTAC+TGG + chr5_4:58450815-58450834 Msa0859960:intron 60.0%
!! AGGGTGGGTGCTACTGGTTG+TGG + chr5_4:58450821-58450840 Msa0859960:intron 60.0%
!! GTGGGTGCTACTGGTTGTGG+TGG + chr5_4:58450824-58450843 Msa0859960:intron 60.0%
ACGGAAGGATAGGGAGAGGG+AGG + chr5_4:58450851-58450870 Msa0859960:intron 60.0%
CGGAAGGATAGGGAGAGGGA+GGG + chr5_4:58450852-58450871 Msa0859960:intron 60.0%
GGTGGTGAGGCGAAAGAGGT+TGG - chr5_4:58452269-58452288 None:intergenic 60.0%
! AGGTGGTGGTGAGGCGAAAG+AGG - chr5_4:58452273-58452292 None:intergenic 60.0%
TGATGGAGGAACGACGGCGA+AGG - chr5_4:58452293-58452312 None:intergenic 60.0%
!! GCAGCATACACTGGTGACGG+TGG + chr5_4:58453800-58453819 Msa0859960:intron 60.0%
!! GCAGCAGAGGCACTAGGTGA+GGG + chr5_4:58455136-58455155 Msa0859960:CDS 60.0%
! ACTTTGGGAGGGGGGAGCTT+TGG + chr5_4:58455587-58455606 Msa0859960:intron 60.0%
! CTTTGGGAGGGGGGAGCTTT+GGG + chr5_4:58455588-58455607 Msa0859960:intron 60.0%
TTGGGAGGGTTTGCAGGGCT+TGG + chr5_4:58455685-58455704 Msa0859960:intron 60.0%
AAGGCCAGATACGACGGAGC+AGG - chr5_4:58456164-58456183 None:intergenic 60.0%
GCCACAGCAAGCCAAGTACC+CGG + chr5_4:58456202-58456221 Msa0859960:CDS 60.0%
ACAGCAAGCCAAGTACCCGG+CGG + chr5_4:58456205-58456224 Msa0859960:CDS 60.0%
TGGTGGTCGGGTTCGAACCC+CGG - chr5_4:58447820-58447839 None:intergenic 65.0%
CGTTAGGGCCGGCCCTAAAC+GGG - chr5_4:58448236-58448255 None:intergenic 65.0%
CCGTTAGGGCCGGCCCTAAA+CGG - chr5_4:58448237-58448256 None:intergenic 65.0%
! CCGTTTAGGGCCGGCCCTAA+CGG + chr5_4:58448234-58448253 Msa0859960:intron 65.0%
! CGTTTAGGGCCGGCCCTAAC+GGG + chr5_4:58448235-58448254 Msa0859960:intron 65.0%
TTTAGCCCGCGGCCCGTGTA+GGG - chr5_4:58448333-58448352 None:intergenic 65.0%
! TACACGGGCCGCGGGCTAAA+CGG + chr5_4:58448333-58448352 Msa0859960:intron 65.0%
!! GGTGGTGGTGGTACTGGTGG+TGG - chr5_4:58449859-58449878 None:intergenic 65.0%
CTCAACAACGCCATCGCCGG+CGG + chr5_4:58450195-58450214 Msa0859960:intron 65.0%
TCTATTTGGGCCAGCGGCGG+TGG + chr5_4:58452154-58452173 Msa0859960:intron 65.0%
AGGAACGACGGCGAAGGTGG+TGG - chr5_4:58452287-58452306 None:intergenic 65.0%
TGGAGGAACGACGGCGAAGG+TGG - chr5_4:58452290-58452309 None:intergenic 65.0%
ACCAAAACGAACGGCGGCGG+CGG - chr5_4:58452322-58452341 None:intergenic 65.0%
!! GGCAGCAGAGGCACTAGGTG+AGG + chr5_4:58455135-58455154 Msa0859960:CDS 65.0%
!! GCCGGGTACTTGGCTTGCTG+TGG - chr5_4:58456206-58456225 None:intergenic 65.0%
! CCTTCATCGGTTGTGCCGCC+GGG - chr5_4:58456223-58456242 None:intergenic 65.0%
! GCCTTCATCGGTTGTGCCGC+CGG - chr5_4:58456224-58456243 None:intergenic 65.0%
! ACGGGCTACCCGGCCCGTTT+AGG + chr5_4:58448220-58448239 Msa0859960:intron 70.0%
CGGGCTACCCGGCCCGTTTA+GGG + chr5_4:58448221-58448240 Msa0859960:intron 70.0%
! CTACCCGGCCCGTTTAGGGC+CGG + chr5_4:58448225-58448244 Msa0859960:intron 70.0%
TACCCGAGCCCGGCCCTACA+CGG + chr5_4:58448317-58448336 Msa0859960:intron 70.0%
GTTTAGCCCGCGGCCCGTGT+AGG - chr5_4:58448334-58448353 None:intergenic 70.0%
GGGCCAGACCGTTTAGCCCG+CGG - chr5_4:58448344-58448363 None:intergenic 70.0%
TCGACGAACACCGCCGGCGA+TGG - chr5_4:58450208-58450227 None:intergenic 70.0%
TCTCTTTCGGCCACCGCCGC+TGG - chr5_4:58452167-58452186 None:intergenic 70.0%
! CGACGGCGAAGGTGGTGGTG+AGG - chr5_4:58452282-58452301 None:intergenic 70.0%
CGGTTGTGCCGCCGGGTACT+TGG - chr5_4:58456216-58456235 None:intergenic 70.0%
CCCGGCGGCACAACCGATGA+AGG + chr5_4:58456220-58456239 Msa0859960:CDS 70.0%
AGGGCCGGCCCTAAACGGGC+CGG - chr5_4:58448232-58448251 None:intergenic 75.0%
ACCCGAGCCCGGCCCTACAC+GGG + chr5_4:58448318-58448337 Msa0859960:intron 75.0%
! GGGCCGCGGGCTAAACGGTC+TGG + chr5_4:58448338-58448357 Msa0859960:intron 75.0%
!! GGCGGCGGCGATGGTGATGG+AGG - chr5_4:58452307-58452326 None:intergenic 75.0%
! GCCGCCGCCGCCGTTCGTTT+TGG + chr5_4:58452318-58452337 Msa0859960:intron 75.0%
! GGGCCGGCCCTAAACGGGCC+GGG - chr5_4:58448231-58448250 None:intergenic 80.0%
! GCCCGTGTAGGGCCGGGCTC+GGG - chr5_4:58448322-58448341 None:intergenic 80.0%
! GGCCCGTGTAGGGCCGGGCT+CGG - chr5_4:58448323-58448342 None:intergenic 80.0%
! GGCGGCGGCGGCGATGGTGA+TGG - chr5_4:58452310-58452329 None:intergenic 80.0%
! ACGAACGGCGGCGGCGGCGA+TGG - chr5_4:58452316-58452335 None:intergenic 80.0%
! GCCCGGCCCTACACGGGCCG+CGG + chr5_4:58448324-58448343 Msa0859960:intron 85.0%
! CCCGCGGCCCGTGTAGGGCC+GGG - chr5_4:58448328-58448347 None:intergenic 85.0%
! CCCGGCCCTACACGGGCCGC+GGG + chr5_4:58448325-58448344 Msa0859960:intron 85.0%
! GCCCGCGGCCCGTGTAGGGC+CGG - chr5_4:58448329-58448348 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 58447157 58456873 58447157 ID=Msa0859960;Name=Msa0859960
chr5_4 mRNA 58447157 58456873 58447157 ID=Msa0859960-mRNA-1;Parent=Msa0859960;Name=Msa0859960-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.37|0.11|1|0.37|0.22|9|240|700
chr5_4 exon 58447157 58447226 58447157 ID=Msa0859960-mRNA-1:exon:17795;Parent=Msa0859960-mRNA-1
chr5_4 exon 58447410 58447645 58447410 ID=Msa0859960-mRNA-1:exon:17796;Parent=Msa0859960-mRNA-1
chr5_4 exon 58448571 58448694 58448571 ID=Msa0859960-mRNA-1:exon:17797;Parent=Msa0859960-mRNA-1
chr5_4 exon 58451446 58451613 58451446 ID=Msa0859960-mRNA-1:exon:17798;Parent=Msa0859960-mRNA-1
chr5_4 exon 58453035 58453433 58453035 ID=Msa0859960-mRNA-1:exon:17799;Parent=Msa0859960-mRNA-1
chr5_4 exon 58453720 58453812 58453720 ID=Msa0859960-mRNA-1:exon:17800;Parent=Msa0859960-mRNA-1
chr5_4 exon 58454795 58454994 58454795 ID=Msa0859960-mRNA-1:exon:17801;Parent=Msa0859960-mRNA-1
chr5_4 exon 58455016 58455219 58455016 ID=Msa0859960-mRNA-1:exon:17802;Parent=Msa0859960-mRNA-1
chr5_4 exon 58456025 58456873 58456025 ID=Msa0859960-mRNA-1:exon:17803;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58447157 58447226 58447157 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58447410 58447645 58447410 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58448571 58448694 58448571 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58451446 58451613 58451446 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58453035 58453433 58453035 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58453720 58453812 58453720 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58454795 58454994 58454795 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58455016 58455219 58455016 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 CDS 58456025 58456633 58456025 ID=Msa0859960-mRNA-1:cds;Parent=Msa0859960-mRNA-1
chr5_4 three_prime_UTR 58456634 58456873 58456634 ID=Msa0859960-mRNA-1:three_prime_utr;Parent=Msa0859960-mRNA-1
Gene Sequence

>Msa0859960

ATGACAACAAATGTTGATAGTGAGAACATATTATTCAACATTACACCCGATCAAGTTAACACTTTTATAAGTAGTGATGAAAGAGTTGAAGCATTGGAAATGGAGAATGAACGTGGAGACACACCATTGCATTTTGCTGCATCAAGGGGTTTTGCTAAAATATGTAAGTGTATTATTGGGAATAATAATGAGAGGATATATTTGTTGAGTCTTAAAAATGAACATGGTGAGACACCTCTTTTTCAAGCTGCAATTAATTGGAGAAAACAAGCATTTGCTTATCTTGCTCATATTTCCAAAGAGATTTATGATTACCTCAGCACACATCTGAACAAAGAAGAATCAACTCCTCTCAAAGTCCTTGCCACTAGACATTCAGCCTTCAAAAGTGCAAGCAATCTTTCATGGTATAAGCGAATCCTATACCACTGCATACTTGTGGAACCACTGGATCCTGCAAAAACAATAAGGTCATATTTGAGAAAGATGGAGGCTCGTCCGGATTCTAACAAGATGAAGTTACCAGATAACTATACCACTTTATATGATTTGTTTTCTATATTTGGTATGTCATATGCCATCAGTACGGTTTTTATTGGAAAAATGGTCAAAATCCATTTACATTTAAAGAACAACAAACAAGGCTCAGAAGATCCATCAAATGACACAAAAAACCTTTTAAAGAAGAACGAACAAGATCCAGAAGATCCATCAAATGATCGTAGTCAACCCACATTAAAGAAGAACGAACAAGACCCAGAAGATCCATCAAATGATCGTAGTCAGTCCAAATTAAAGAAGAACGAACAAGACCCAGAAGATCCATCAAACAAGACCCAGAAGAAAGAACAAAACCCAGAAGATCCATCAAATAAGATCCAGAAGAACAAACAAGAACGAGAGAAATATCCTGTTGGATTTTTGCCAAAAAATTATGAAACCTTTCTTGAATTTGTCAAGTCTGCATATGTACACACTCTTGGCCTTTCGGGAGTAGAGTTGAAGGATGTAAAGACTGCAAAGAAGAAGCACATATGGAGTAGTCAGCTGTTGAAGGCATTGATGAAAAGACCTTATGCAGCATACACTGATGAAAAACAAGAACAAAAGGAAAATGAGATAAATGAAACCACATCAACTCCAAATGAAAGTAAAAAGAAGGAAACAAAAGTTGACAAAAAGGAGACACCATTTTTGGTTGCAGCAAAAAATGGAATAGTTGAACTGGTTAACGAAATTCTAGACAAAATACCAAGCGCCATTCATGACACAAACTCAAAGAAAGAAAATTCAAGACAACCCCTTATTGTTGAGACATTGAAAACGAGAATGATTAAGGACTCAAAAGAAGAACTTTGGAATAACTTGGTTCTTGCAATGGATAAGGAGGAGAATACAATATTGCATTTGGCAGCAGAGGCACTAGGTGAGGGTAAACCTTGGCAGATTGCTGGTTCTGCCTTACAAATGATGTGGGATATAAAATGGTTTCAGTATATCAAAAGCCTTGTACCACAACACTTCTACTTTAGAACCAACAAAGAGGGAAAAATATCAAGTGAAATTTTCAAGAAATCACACGAAGATCTTATAAAAGACAGCAGTGACTGGCTAAAAGACACGTCGGAATCCTGCTCCGTCGTATCTGGCCTTGTAGCCGGTGTTTCCTTCGCCACAGCAAGCCAAGTACCCGGCGGCACAACCGATGAAGGCAGTCCAGTATTAGAAGGCAAGCCTGCATTCGATGCCTTTGCCATTTCTTCGCTTATTGGACTTTGCTTCTCTGTTACTGGACTCATCATGTTCCTTTCAATTCTCACTTCTCGAAAACAAGCCAAAGATTTTCGTCGAGATTTGCCACTGAAACTTCTTCTTGGGTTAAGCTCTCTTTTTGTGTCCATTGCTTCATTGTTTGTTTCATTCTGCAGTGGACATTTTTTTCTGCTTAGCCATAATTTTAAGTCGATTTTGTTCCCAATTTACGCAACAACTTGTTTACCTGTGACTTTCTATGCTGTTGCACAATTCCCTCTATACTTTGATCTTGTAATGGCTATTTTAACCAAGGTTCCAACGGCAACCGATAAAGGTGACAATTTATAA
Protein sequence

>Msa0859960

MTTNVDSENILFNITPDQVNTFISSDERVEALEMENERGDTPLHFAASRGFAKICKCIIGNNNERIYLLSLKNEHGETPLFQAAINWRKQAFAYLAHISKEIYDYLSTHLNKEESTPLKVLATRHSAFKSASNLSWYKRILYHCILVEPLDPAKTIRSYLRKMEARPDSNKMKLPDNYTTLYDLFSIFGMSYAISTVFIGKMVKIHLHLKNNKQGSEDPSNDTKNLLKKNEQDPEDPSNDRSQPTLKKNEQDPEDPSNDRSQSKLKKNEQDPEDPSNKTQKKEQNPEDPSNKIQKNKQEREKYPVGFLPKNYETFLEFVKSAYVHTLGLSGVELKDVKTAKKKHIWSSQLLKALMKRPYAAYTDEKQEQKENEINETTSTPNESKKKETKVDKKETPFLVAAKNGIVELVNEILDKIPSAIHDTNSKKENSRQPLIVETLKTRMIKDSKEELWNNLVLAMDKEENTILHLAAEALGEGKPWQIAGSALQMMWDIKWFQYIKSLVPQHFYFRTNKEGKISSEIFKKSHEDLIKDSSDWLKDTSESCSVVSGLVAGVSFATASQVPGGTTDEGSPVLEGKPAFDAFAISSLIGLCFSVTGLIMFLSILTSRKQAKDFRRDLPLKLLLGLSSLFVSIASLFVSFCSGHFFLLSHNFKSILFPIYATTCLPVTFYAVAQFPLYFDLVMAILTKVPTATDKGDNL*