AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0819680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0819680 MtrunA17_Chr5g0439061 75.379 792 141 8 1 786 1 744 0.0 1129
Msa0819680 MtrunA17_Chr3g0102001 48.659 783 331 15 22 786 20 749 0.0 669
Msa0819680 MtrunA17_Chr5g0439071 50.487 616 199 13 1 584 1 542 5.78e-179 525
Msa0819680 MtrunA17_Chr2g0286601 35.072 767 398 20 27 782 12 689 6.33e-137 421
Msa0819680 MtrunA17_Chr2g0286551 34.686 764 384 17 27 782 12 668 6.13e-127 394
Msa0819680 MtrunA17_Chr5g0439051 91.626 203 17 0 584 786 20 222 9.53e-122 364
Msa0819680 MtrunA17_Chr3g0098481 55.046 327 139 3 464 786 23 345 4.42e-119 362
Msa0819680 MtrunA17_Chr5g0439031 68.548 248 45 3 183 430 7 221 3.25e-102 315
Msa0819680 MtrunA17_Chr3g0098531 52.703 296 133 3 494 786 6 297 6.47e-101 313
Msa0819680 MtrunA17_Chr5g0439021 80.220 182 35 1 1 182 1 181 1.67e-97 300
Msa0819680 MtrunA17_Chr3g0098301 45.480 354 178 4 428 777 60 402 6.96e-95 301
Msa0819680 MtrunA17_Chr5g0439081 66.667 201 66 1 584 784 16 215 1.27e-86 273
Msa0819680 MtrunA17_Chr5g0439041 85.806 155 22 0 430 584 14 168 9.16e-86 271
Msa0819680 MtrunA17_Chr3g0098541 38.384 396 182 8 52 426 3 357 1.19e-75 249
Msa0819680 MtrunA17_Chr2g0286561 48.571 210 107 1 574 782 5 214 3.57e-62 208
Msa0819680 MtrunA17_Chr3g0098291 43.860 228 116 8 11 233 15 235 2.96e-45 162
Msa0819680 MtrunA17_Chr2g0297701 34.694 294 183 3 478 769 280 566 5.44e-45 171
Msa0819680 MtrunA17_Chr2g0284541 37.954 303 171 5 475 773 351 640 5.55e-45 172
Msa0819680 MtrunA17_Chr2g0284541 27.513 189 117 6 57 231 36 218 2.60e-11 67.4
Msa0819680 MtrunA17_Chr2g0297481 33.993 303 188 4 468 769 177 468 7.04e-45 168
Msa0819680 MtrunA17_Chr2g0297491 33.003 303 195 2 468 769 79 374 3.78e-44 164
Msa0819680 MtrunA17_Chr2g0297691 34.416 308 191 6 467 769 387 688 5.22e-44 169
Msa0819680 MtrunA17_Chr2g0284501 37.013 308 175 5 475 776 367 661 8.64e-44 169
Msa0819680 MtrunA17_Chr2g0284501 30.769 182 116 3 58 231 47 226 4.62e-17 85.9
Msa0819680 MtrunA17_Chr2g0297681 34.405 311 193 6 467 772 385 689 3.65e-43 167
Msa0819680 MtrunA17_Chr2g0297651 34.694 294 178 6 480 769 404 687 2.76e-41 161
Msa0819680 MtrunA17_Chr5g0443001 33.673 294 184 5 480 771 316 600 6.79e-40 156
Msa0819680 MtrunA17_Chr6g0456101 31.561 301 189 4 478 773 451 739 2.78e-38 152
Msa0819680 MtrunA17_Chr6g0456141 30.717 293 186 4 478 765 94 374 3.34e-37 144
Msa0819680 MtrunA17_Chr5g0410271 29.552 335 209 5 435 768 12 320 9.79e-37 141
Msa0819680 MtrunA17_Chr2g0286571 33.214 280 175 7 27 304 12 281 1.11e-36 140
Msa0819680 MtrunA17_Chr5g0410201 29.394 330 206 5 440 768 18 321 1.30e-36 140
Msa0819680 MtrunA17_Chr6g0457101 29.293 297 201 4 478 773 398 686 1.95e-35 143
Msa0819680 MtrunA17_Chr6g0457101 29.798 198 113 9 53 238 143 326 7.75e-12 68.9
Msa0819680 MtrunA17_Chr5g0410171 30.375 293 198 3 477 768 440 727 5.44e-35 142
Msa0819680 MtrunA17_Chr5g0410171 27.679 224 140 6 31 238 133 350 3.91e-12 70.1
Msa0819680 MtrunA17_Chr5g0410341 28.829 333 210 5 437 768 433 739 2.56e-34 140
Msa0819680 MtrunA17_Chr5g0410461 30.743 296 194 4 478 768 169 458 1.47e-33 135
Msa0819680 MtrunA17_Chr3g0100741 30.420 286 188 5 480 763 311 587 2.06e-33 136
Msa0819680 MtrunA17_Chr5g0410581 30.293 307 187 5 478 768 500 795 2.44e-33 137
Msa0819680 MtrunA17_Chr3g0098511 55.882 102 43 1 687 786 1 102 3.08e-33 123
Msa0819680 MtrunA17_Chr3g0100301 36.000 200 125 3 569 766 205 403 4.12e-33 132
Msa0819680 MtrunA17_Chr3g0098491 43.590 156 80 4 29 182 1 150 3.12e-32 122
Msa0819680 MtrunA17_Chr2g0297711 30.034 293 195 4 480 769 238 523 1.03e-31 130
Msa0819680 MtrunA17_Chr5g0410371 30.928 291 191 5 478 764 2 286 2.44e-31 124
Msa0819680 MtrunA17_Chr3g0098521 41.509 159 85 4 29 185 1 153 9.06e-30 115
Msa0819680 MtrunA17_Chr5g0410191 35.673 171 108 2 599 768 17 186 2.21e-29 115
Msa0819680 MtrunA17_Chr3g0096941 27.719 285 197 3 480 763 312 588 1.63e-28 121
Msa0819680 MtrunA17_Chr5g0410541 33.533 167 107 1 599 761 38 204 2.02e-22 96.7
Msa0819680 MtrunA17_Chr5g0410451 31.429 175 115 2 599 768 56 230 1.39e-19 89.0
Msa0819680 MtrunA17_Chr1g0211531 25.497 302 206 6 480 772 243 534 1.83e-17 86.7
Msa0819680 MtrunA17_Chr5g0410511 32.447 188 112 4 584 762 2 183 5.49e-17 80.5
Msa0819680 MtrunA17_Chr2g0297611 38.636 88 53 1 589 676 1 87 5.93e-16 73.9
Msa0819680 MtrunA17_Chr5g0410181 35.294 136 83 5 643 775 2 135 9.73e-16 74.7
Msa0819680 MtrunA17_Chr5g0410211 31.088 193 113 6 52 231 11 196 1.42e-15 76.3
Msa0819680 MtrunA17_Chr5g0410291 28.649 185 121 5 53 231 12 191 1.18e-13 70.9
Msa0819680 MtrunA17_Chr2g0297521 35.294 85 53 2 576 659 1 84 1.90e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0819680 AT3G18670.1 33.224 304 194 4 480 782 296 591 5.39e-43 166
Msa0819680 AT3G18670.2 33.224 304 194 4 480 782 351 646 7.93e-43 166
Msa0819680 AT3G18670.2 26.168 214 147 5 31 239 60 267 1.28e-14 78.2
Msa0819680 AT5G35810.1 32.353 306 184 7 475 767 31 326 1.87e-38 147
Msa0819680 AT5G04700.1 32.588 313 200 5 467 775 353 658 6.26e-38 151
Msa0819680 AT5G04690.1 31.731 312 199 6 467 775 314 614 1.03e-36 147
Msa0819680 AT5G04690.3 31.731 312 199 6 467 775 334 634 1.17e-36 147
Msa0819680 AT5G04690.2 31.731 312 199 6 467 775 348 648 1.51e-36 147
Msa0819680 AT5G04730.1 31.169 308 200 5 467 769 285 585 2.72e-35 142
Msa0819680 AT3G54065.1 34.146 205 128 1 570 767 8 212 4.27e-33 128
Msa0819680 AT5G04680.3 32.500 240 150 3 547 775 401 639 8.73e-31 129
Msa0819680 AT5G04680.4 32.500 240 150 3 547 775 415 653 1.24e-30 129
Msa0819680 AT5G04680.1 32.500 240 150 3 547 775 444 682 1.46e-30 129
Msa0819680 AT5G04680.2 32.627 236 147 3 547 771 292 526 2.05e-30 127

Find 154 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGTTCTTGTTCTTTCTTC+TGG 0.038655 5_3:-56437325 None:intergenic
TTGTTCGTTCTTCTTTAATT+TGG 0.141661 5_3:-56437234 None:intergenic
AAACAAGTTGTTGCGTAAAT+TGG 0.148570 5_3:-56441080 None:intergenic
ATCTTGTTTGATGGATCTTC+TGG 0.161596 5_3:-56437260 None:intergenic
CGATCATTTGATGGATCTTC+TGG 0.177619 5_3:-56437203 None:intergenic
AAAATATGTAAGTGTATTAT+TGG 0.191869 5_3:+56435213 Msa0819680:CDS
TTCTTCTGGGTCTTGTTTGA+TGG 0.210847 5_3:-56437311 None:intergenic
GGACTTTGCTTCTCTGTTAC+TGG 0.211203 5_3:+56440876 Msa0819680:CDS
TGTTCTTCTTTAAATCTAAA+TGG 0.215839 5_3:-56437172 None:intergenic
AAATGATGTGGGATATAAAA+TGG 0.216030 5_3:+56439343 Msa0819680:CDS
TATAAAGTGGTATAGTTATT+TGG 0.222591 5_3:-56436643 None:intergenic
TTTGCCATTTCTTCGCTTAT+CGG 0.224342 5_3:+56440855 Msa0819680:CDS
ATAAAATCGTTAACTTCTTC+TGG 0.237352 5_3:-56434937 None:intergenic
TCCTTCTGGATCTTGTTTGA+TGG 0.241654 5_3:-56437269 None:intergenic
GTGGGATATAAAATGGTTTC+AGG 0.281361 5_3:+56439350 Msa0819680:CDS
TCGTTCTTGTTCTTTCTTCT+GGG 0.298583 5_3:-56437324 None:intergenic
AAAGGAAGAAGTTGACAAAA+AGG 0.298922 5_3:+56439017 Msa0819680:CDS
ACAAAATCGACTTAAAATTA+TGG 0.305812 5_3:-56441055 None:intergenic
CGGTTGTGCCGCCGGGTACT+TGG 0.306931 5_3:-56440788 None:intergenic
AGTGCTTTGTGAGCTTGTTC+TGG 0.307381 5_3:-56435018 None:intergenic
TTTCAATGTCTCAACAATAA+GGG 0.308887 5_3:-56439178 None:intergenic
ATTGAAAACGAGAATGATTA+AGG 0.309215 5_3:+56439194 Msa0819680:CDS
AACTTCATCTTGTTAGAATC+TGG 0.309225 5_3:-56436619 None:intergenic
CAAATCTCGACGAAAATCTT+TGG 0.312718 5_3:-56440940 None:intergenic
TCAGCTGTTGAAGGCATTAA+TGG 0.315387 5_3:+56437753 Msa0819680:CDS
TTGCCACTGAAACTTCTTCT+TGG 0.320343 5_3:+56440960 Msa0819680:CDS
ACATAAAGAAAGTGAGATAA+AGG 0.331676 5_3:+56438942 Msa0819680:CDS
GAATCCTGCTCCGTCGTATC+TGG 0.341785 5_3:+56440732 Msa0819680:CDS
ATCTTCTTCGTCCAAATCTA+TGG 0.349665 5_3:-56435076 None:intergenic
TTGGTGTGATTATGTTATGT+TGG 0.350614 5_3:+56441289 Msa0819680:three_prime_UTR
ATGAGTACTTACAGTGGTAT+AGG 0.361630 5_3:-56436464 None:intergenic
GATAAATAATGTGATACATT+AGG 0.365137 5_3:+56434802 None:intergenic
AAAGTGCAAGCAATCTTTCA+TGG 0.371144 5_3:+56436430 Msa0819680:CDS
TGGTGTGATTATGTTATGTT+GGG 0.371403 5_3:+56441290 Msa0819680:three_prime_UTR
GCAGGCTTGCCTTCTAATAC+TGG 0.371770 5_3:-56440822 None:intergenic
ATCACATTATATATGAGTTC+TGG 0.376179 5_3:+56441428 Msa0819680:three_prime_UTR
GACTGACTACGATCATTTGA+TGG 0.376806 5_3:-56437212 None:intergenic
GGAGAATACAATATTGCATT+TGG 0.380804 5_3:+56439266 Msa0819680:CDS
GCCTTCATCGGTTGTGCCGC+CGG 0.385688 5_3:-56440796 None:intergenic
ATTACATGTAGCCATAGATT+TGG 0.386158 5_3:+56435065 Msa0819680:CDS
TATATCCCACATCATTTGTA+AGG 0.387340 5_3:-56439337 None:intergenic
GTACACACTCTTGGCCTTAC+GGG 0.388425 5_3:+56437416 Msa0819680:CDS
TATATACCTTGTTTGAAGTT+GGG 0.389324 5_3:-56437859 None:intergenic
TCTTGTTTGATGGATCTTCT+GGG 0.391484 5_3:-56437259 None:intergenic
GGTAAACCTTGGCAGATTGC+TGG 0.400538 5_3:+56439309 Msa0819680:CDS
GTTCCAACGGCAACTGATAA+AGG 0.401370 5_3:+56441173 Msa0819680:CDS
TGCCACTGAAACTTCTTCTT+GGG 0.402128 5_3:+56440961 Msa0819680:CDS
CCATTTATTTAAAGAGTTGA+AGG 0.402654 5_3:+56437693 Msa0819680:intron
AGTACACATTGGAAGGGAAA+TGG 0.405223 5_3:+56434965 Msa0819680:CDS
AAATATGTAAGTGTATTATT+GGG 0.409620 5_3:+56435214 Msa0819680:CDS
CTTGGTTCTTGCAATGGATA+AGG 0.410815 5_3:+56439242 Msa0819680:CDS
ACATAATAATTTCGAGGCAT+TGG 0.413622 5_3:+56435131 Msa0819680:CDS
AACAAGTTGTTGCGTAAATT+GGG 0.414969 5_3:-56441079 None:intergenic
CTTTGAGTTTGTGTCATGAA+TGG 0.419985 5_3:-56439115 None:intergenic
AGGACTCAAAAGATGAACTT+TGG 0.420552 5_3:+56439214 Msa0819680:CDS
GCTATCCGAGCAGAATATTT+CGG 0.426071 5_3:+56435414 Msa0819680:CDS
ATATATACCTTGTTTGAAGT+TGG 0.427370 5_3:-56437860 None:intergenic
ATCAGTTGCCGTTGGAACCT+TGG 0.431237 5_3:-56441168 None:intergenic
AAGTCCGATAAGCGAAGAAA+TGG 0.432499 5_3:-56440859 None:intergenic
TAATTTCGAGGCATTGGAAA+TGG 0.434561 5_3:+56435137 Msa0819680:CDS
TCTATACTTTGATCTTGTAA+TGG 0.440450 5_3:+56441136 Msa0819680:CDS
AGATGAACTTTGGAATAACT+TGG 0.443962 5_3:+56439224 Msa0819680:CDS
TTCTTCTGGTGAATCAATGT+TGG 0.445367 5_3:-56434923 None:intergenic
TGTACACACTCTTGGCCTTA+CGG 0.449429 5_3:+56437415 Msa0819680:CDS
CAAGATCTTGTACGAGAAGA+TGG 0.450747 5_3:+56435372 Msa0819680:CDS
TCTTCTGGTGAATCAATGTT+GGG 0.452025 5_3:-56434922 None:intergenic
GAATAACTTGGTTCTTGCAA+TGG 0.454265 5_3:+56439236 Msa0819680:CDS
CTGCAAAGAAGAAGCACATA+TGG 0.460666 5_3:+56437725 Msa0819680:CDS
AGACTTGACAAATTCAAGAA+AGG 0.462199 5_3:-56437387 None:intergenic
ATTACAAGATCAAAGTATAG+AGG 0.462561 5_3:-56441134 None:intergenic
AAGGTGGTCAACCAACTGAT+AGG 0.468369 5_3:+56437803 Msa0819680:CDS
GATCATTTGATGGATCTTCT+GGG 0.469548 5_3:-56437202 None:intergenic
TTTAACACATAATAATTTCG+AGG 0.471815 5_3:+56435125 Msa0819680:CDS
ATATTTCCAACACCACACTA+TGG 0.473758 5_3:-56441219 None:intergenic
AGAAAAGAAATCATATAAAG+TGG 0.481730 5_3:-56436656 None:intergenic
GTCGTATCTGGCCTTGTAGC+CGG 0.482864 5_3:+56440744 Msa0819680:CDS
AACTCCAAATAAAACAATGA+TGG 0.483123 5_3:+56438975 Msa0819680:CDS
GAAGGCAGTCCAGTATTAGA+AGG 0.486374 5_3:+56440813 Msa0819680:CDS
AAGGTCATATTTGAGAAAGA+TGG 0.486960 5_3:+56436588 Msa0819680:CDS
AACAAAACCTGAATATGAAA+AGG 0.491310 5_3:+56438999 Msa0819680:CDS
ATAAATCAATTACATCCTTC+CGG 0.495793 5_3:-56441386 None:intergenic
CCTTCATCGGTTGTGCCGCC+GGG 0.497322 5_3:-56440795 None:intergenic
TTATAAAAGACAGCAGTGAC+TGG 0.507389 5_3:+56440694 Msa0819680:CDS
ATAAGTGAGTACACATTGGA+AGG 0.508906 5_3:+56434958 Msa0819680:CDS
GATTTAAAGAAGAACAAAGA+AGG 0.509187 5_3:+56437179 Msa0819680:CDS
AGACCTTACGCAGCATTCAC+TGG 0.509359 5_3:+56437778 Msa0819680:CDS
ATGGCAAAGGCATCGAATGC+AGG 0.510886 5_3:-56440840 None:intergenic
AGTAGAAGTGTTGTGGTACA+AGG 0.516357 5_3:-56440611 None:intergenic
AGGCATACTCGTGGAACCAC+TGG 0.516406 5_3:+56436549 Msa0819680:intron
CGATCGATTTCCCTATCAGT+TGG 0.518766 5_3:-56437814 None:intergenic
CGAAGGAAACACCGGCTACA+AGG 0.520059 5_3:-56440755 None:intergenic
GTACACATTGGAAGGGAAAT+GGG 0.520836 5_3:+56434966 Msa0819680:CDS
TCTGCATATGTACACACTCT+TGG 0.522677 5_3:+56437407 Msa0819680:CDS
CCCGGCGGCACAACCGATGA+AGG 0.523089 5_3:+56440795 Msa0819680:CDS
TTCGAGAAGTGAGAATTGAA+AGG 0.531102 5_3:-56440911 None:intergenic
TTCAATGTCTCAACAATAAG+GGG 0.532327 5_3:-56439177 None:intergenic
TTGTTTGTTTCATTCTGCAG+TGG 0.532546 5_3:+56441014 Msa0819680:CDS
TACTTGGCTTGCTGTGGCGA+AGG 0.532602 5_3:-56440772 None:intergenic
TAATACTGGACTGCCTTCAT+CGG 0.542610 5_3:-56440808 None:intergenic
AGCACACAGCTGAACAAAGA+AGG 0.543285 5_3:+56436363 Msa0819680:CDS
AAGGCCAGATACGACGGAGC+AGG 0.546469 5_3:-56440736 None:intergenic
ATGGAGTAGTCAGCTGTTGA+AGG 0.548671 5_3:+56437744 Msa0819680:CDS
CATTTGGCAGCAGAGGCACT+AGG 0.552441 5_3:+56439282 Msa0819680:CDS
TTCTTGTTCATCGAACCTAT+CGG 0.553554 5_3:-56438914 None:intergenic
GCACTTATCTCTGAATCAGC+TGG 0.560279 5_3:+56435036 Msa0819680:CDS
CTTTGTTCAGCTGTGTGCTG+AGG 0.560289 5_3:-56436359 None:intergenic
AATATTGCATTTGGCAGCAG+AGG 0.563757 5_3:+56439275 Msa0819680:CDS
GGCAGCAGAGGCACTAGGTG+AGG 0.564778 5_3:+56439287 Msa0819680:CDS
GTGTTTCCATAGTGTGGTGT+TGG 0.567001 5_3:+56441213 Msa0819680:three_prime_UTR
GTTCTAAAGTAGAAGTGTTG+TGG 0.567191 5_3:-56440618 None:intergenic
ATTTACCGAAATATTCTGCT+CGG 0.569083 5_3:-56435419 None:intergenic
AATCAAGTGTTTCCATAGTG+TGG 0.572101 5_3:+56441207 Msa0819680:exon
TGAAACAAACAATGAAGCAA+TGG 0.573882 5_3:-56441003 None:intergenic
TCACCTTTATCAGTTGCCGT+TGG 0.574717 5_3:-56441176 None:intergenic
TAAGTGAGTACACATTGGAA+GGG 0.576800 5_3:+56434959 Msa0819680:CDS
TACTTTAGAACCAACAAAGA+GGG 0.578243 5_3:+56440630 Msa0819680:CDS
TTACAAGATCAAAGTATAGA+GGG 0.582219 5_3:-56441133 None:intergenic
TCACCAGTGAATGCTGCGTA+AGG 0.582317 5_3:-56437781 None:intergenic
AGGTGGTCAACCAACTGATA+GGG 0.582538 5_3:+56437804 Msa0819680:CDS
GGCTACAAGGCCAGATACGA+CGG 0.588972 5_3:-56440742 None:intergenic
CTACTTTAGAACCAACAAAG+AGG 0.590391 5_3:+56440629 Msa0819680:CDS
GTTCTGCCTTACAAATGATG+TGG 0.591145 5_3:+56439331 Msa0819680:CDS
GCCGGGTACTTGGCTTGCTG+TGG 0.591377 5_3:-56440778 None:intergenic
TTTGAAGGCTGAAGGTCTAG+TGG 0.592102 5_3:-56436409 None:intergenic
TGCTGTGGCGAAGGAAACAC+CGG 0.593416 5_3:-56440763 None:intergenic
GCCACAGCAAGCCAAGTACC+CGG 0.597454 5_3:+56440777 Msa0819680:CDS
TTTGATCCCAACTTCAAACA+AGG 0.601868 5_3:+56437853 Msa0819680:CDS
GAACGAGAGAAATATCATGT+TGG 0.602064 5_3:+56437341 Msa0819680:CDS
TACGCAGCATTCACTGGTGA+AGG 0.602981 5_3:+56437784 Msa0819680:CDS
ACTCTTGGCCTTACGGGAGT+AGG 0.605219 5_3:+56437422 Msa0819680:CDS
GCAGCAGAGGCACTAGGTGA+GGG 0.608379 5_3:+56439288 Msa0819680:CDS
TTTGTGTCATGAATGGCGCT+TGG 0.609130 5_3:-56439108 None:intergenic
GCAACGGCATAGAAAGTCAC+AGG 0.609441 5_3:-56441104 None:intergenic
GGTTCTTGCAATGGATAAGG+AGG 0.610176 5_3:+56439245 Msa0819680:CDS
AGGCTGAAGGTCTAGTGGCA+AGG 0.613015 5_3:-56436404 None:intergenic
CACTGGCAGGTGAAACCGAT+AGG 0.613392 5_3:+56438899 Msa0819680:intron
CTAGTGGCAAGGACTTTGAG+AGG 0.614051 5_3:-56436393 None:intergenic
AACCCAAGAAGAAGTTTCAG+TGG 0.615748 5_3:-56440963 None:intergenic
TTGGAAATGGTGAATGAACA+TGG 0.615998 5_3:+56435150 Msa0819680:CDS
CACTAGGTGAGGGTAAACCT+TGG 0.620947 5_3:+56439298 Msa0819680:CDS
GTCATATTTGAGAAAGATGG+AGG 0.625519 5_3:+56436591 Msa0819680:CDS
GCAGCATTCACTGGTGAAGG+TGG 0.632950 5_3:+56437787 Msa0819680:CDS
GCAGAACCAGCAATCTGCCA+AGG 0.638622 5_3:-56439315 None:intergenic
GGTGTGATTATGTTATGTTG+GGG 0.644922 5_3:+56441291 Msa0819680:three_prime_UTR
GACAAATTAAGGCATACTCG+TGG 0.648628 5_3:+56436540 Msa0819680:intron
CTTGATGCTGCAAAATGCAA+TGG 0.650139 5_3:-56435180 None:intergenic
TCCATCAAACAAGATCCAGA+AGG 0.651121 5_3:+56437268 Msa0819680:CDS
TGTACATACCTACTCCCGTA+AGG 0.655475 5_3:-56437430 None:intergenic
TTCTGCCTTACAAATGATGT+GGG 0.657635 5_3:+56439332 Msa0819680:CDS
GATAAGCGAAGAAATGGCAA+AGG 0.668284 5_3:-56440853 None:intergenic
GTATAGAGGGAATTGTGCAA+CGG 0.675406 5_3:-56441120 None:intergenic
TTATTGGGAATAATAATCAG+AGG 0.679178 5_3:+56435229 Msa0819680:CDS
TGACTGGCTAAAAGACACGT+CGG 0.732129 5_3:+56440710 Msa0819680:CDS
ACAGCAAGCCAAGTACCCGG+CGG 0.744284 5_3:+56440780 Msa0819680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAAAAAAATAAAAAAT+TGG - chr5_3:56438160-56438179 None:intergenic 0.0%
!!! CTAATTTTTTTTTTTAGATT+AGG - chr5_3:56436124-56436143 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAAACTA+TGG - chr5_3:56436736-56436755 None:intergenic 10.0%
!!! CATAGTTTTTTTTTTTTTTT+TGG + chr5_3:56436734-56436753 Msa0819680:intron 10.0%
!! AAAAAACAAATAAAGTTATT+TGG - chr5_3:56437131-56437150 None:intergenic 10.0%
!!! TTATTTTTTTTTACTACAAA+AGG + chr5_3:56437484-56437503 Msa0819680:intron 10.0%
!!! TTTTTATTTGTATAACATTT+CGG - chr5_3:56437605-56437624 None:intergenic 10.0%
!! ATGTTATACAAATAAAAAAT+AGG + chr5_3:56437607-56437626 Msa0819680:intron 10.0%
!!! GATTCTTTTTTTTTTTTTTT+TGG + chr5_3:56437960-56437979 Msa0819680:intron 10.0%
!!! ATTCATAATCATTTTTAAAA+AGG + chr5_3:56439395-56439414 Msa0819680:intron 10.0%
!!! TTCATAATCATTTTTAAAAA+GGG + chr5_3:56439396-56439415 Msa0819680:intron 10.0%
!!! TTGTTTTTATATAACTTAAA+AGG - chr5_3:56440041-56440060 None:intergenic 10.0%
!!! CATATTTAAATATTTTCATT+GGG - chr5_3:56440542-56440561 None:intergenic 10.0%
!!! ACATATTTAAATATTTTCAT+TGG - chr5_3:56440543-56440562 None:intergenic 10.0%
!!! TTCTTTTTTCTTTTTAAATG+AGG - chr5_3:56434852-56434871 None:intergenic 15.0%
!! AAAATATGTAAGTGTATTAT+TGG + chr5_3:56435213-56435232 Msa0819680:CDS 15.0%
!! AAATATGTAAGTGTATTATT+GGG + chr5_3:56435214-56435233 Msa0819680:CDS 15.0%
!!! TATATATAGCTTATACTTTT+AGG + chr5_3:56435501-56435520 Msa0819680:intron 15.0%
!!! TTTTAGGATGATTAATTTTT+GGG + chr5_3:56435517-56435536 Msa0819680:intron 15.0%
!!! GTTTATTTGTTCTTATATTT+TGG + chr5_3:56435936-56435955 Msa0819680:intron 15.0%
!! ATTTAAACCTACTTTAAATT+TGG + chr5_3:56435963-56435982 Msa0819680:intron 15.0%
!! TTATGATTTATGAACTAAAT+TGG - chr5_3:56436033-56436052 None:intergenic 15.0%
!!! TATGATTTCTTTTCTATATT+TGG + chr5_3:56436664-56436683 Msa0819680:CDS 15.0%
!! GTATATAATAGAACATTATA+GGG - chr5_3:56437016-56437035 None:intergenic 15.0%
!! AATATCAATTATACAAAAGT+AGG - chr5_3:56437529-56437548 None:intergenic 15.0%
!!! TTTTATTTGTATAACATTTC+GGG - chr5_3:56437604-56437623 None:intergenic 15.0%
!! ATACAAATAAAAAATAGGAT+AGG + chr5_3:56437612-56437631 Msa0819680:intron 15.0%
!!! TTTTTTTTTTTGGTAAACTA+AGG + chr5_3:56437970-56437989 Msa0819680:intron 15.0%
!!! ACGAAATATAATACTTTTTA+TGG + chr5_3:56437999-56438018 Msa0819680:intron 15.0%
!! CATACATAAAATAAAATAGA+TGG - chr5_3:56438055-56438074 None:intergenic 15.0%
!!! CATCTATTTTATTTTATGTA+TGG + chr5_3:56438053-56438072 Msa0819680:intron 15.0%
!! AATTTATAAGTTTAGTATAG+TGG - chr5_3:56438091-56438110 None:intergenic 15.0%
!!! TTTTCGGTAATATTTTATTT+GGG + chr5_3:56438816-56438835 Msa0819680:intron 15.0%
!!! ATTTTAAAAGGAAAATTCTA+TGG - chr5_3:56439823-56439842 None:intergenic 15.0%
!!! CAAGTAAACAATATTTTAAA+AGG - chr5_3:56439835-56439854 None:intergenic 15.0%
!! AAAATCTTCATAATAACTTA+CGG + chr5_3:56440003-56440022 Msa0819680:intron 15.0%
!! ATATAGTTTATACATAAGTT+TGG + chr5_3:56440080-56440099 Msa0819680:intron 15.0%
!! TATAGTTTATACATAAGTTT+GGG + chr5_3:56440081-56440100 Msa0819680:intron 15.0%
!! TATATATTGAACAAAGATTT+GGG + chr5_3:56440248-56440267 Msa0819680:intron 15.0%
!! TTTAACACATAATAATTTCG+AGG + chr5_3:56435125-56435144 Msa0819680:CDS 20.0%
!! TTGAGTCTTAAAAATAAAGA+TGG + chr5_3:56435261-56435280 Msa0819680:CDS 20.0%
!!! CTTTTAGGATGATTAATTTT+TGG + chr5_3:56435516-56435535 Msa0819680:intron 20.0%
!!! TTTTTTTAAACAATGCACTT+CGG - chr5_3:56435559-56435578 None:intergenic 20.0%
!!! TACTTCTTTTGATTACTTTA+TGG + chr5_3:56435659-56435678 Msa0819680:intron 20.0%
!!! GTTTAATCCAAATTTAAAGT+AGG - chr5_3:56435973-56435992 None:intergenic 20.0%
!! CACTATATATTTATATACTG+TGG + chr5_3:56436152-56436171 Msa0819680:intron 20.0%
!! CTTTGCAATATAATATGTTA+TGG + chr5_3:56436297-56436316 Msa0819680:intron 20.0%
!!! ATTTGTTTGTTGACAAATTA+AGG + chr5_3:56436529-56436548 Msa0819680:intron 20.0%
!! TATAAAGTGGTATAGTTATT+TGG - chr5_3:56436646-56436665 None:intergenic 20.0%
!! AGAAAAGAAATCATATAAAG+TGG - chr5_3:56436659-56436678 None:intergenic 20.0%
!! GGTATATAATAGAACATTAT+AGG - chr5_3:56437017-56437036 None:intergenic 20.0%
!!! AACTTTATTTGTTTTTTGTC+AGG + chr5_3:56437134-56437153 Msa0819680:intron 20.0%
!! TGTTCTTCTTTAAATCTAAA+TGG - chr5_3:56437175-56437194 None:intergenic 20.0%
!!! AGAAAGGTTTCATAATTTTT+TGG - chr5_3:56437374-56437393 None:intergenic 20.0%
!! AAAATAGACACTAGTTAATA+TGG - chr5_3:56437462-56437481 None:intergenic 20.0%
!! AATAAAAAATAGGATAGGAT+AGG + chr5_3:56437617-56437636 Msa0819680:intron 20.0%
!! TATCAAAACTATCAATTTCA+TGG + chr5_3:56438112-56438131 Msa0819680:intron 20.0%
!! AACATAATTATCGTTGTAAA+CGG - chr5_3:56438746-56438765 None:intergenic 20.0%
!!! GTTTTCGGTAATATTTTATT+TGG + chr5_3:56438815-56438834 Msa0819680:intron 20.0%
!!! TTTTATGAAAATAGCTAACA+TGG - chr5_3:56439987-56440006 None:intergenic 20.0%
!! ATAGTTTATACATAAGTTTG+GGG + chr5_3:56440082-56440101 Msa0819680:intron 20.0%
!! GTATATATTGAACAAAGATT+TGG + chr5_3:56440247-56440266 Msa0819680:intron 20.0%
!!! TAACAAATAATGGAGTAAAT+AGG - chr5_3:56440321-56440340 None:intergenic 20.0%
!! TATTTACTCCATTATTTGTT+AGG + chr5_3:56440320-56440339 Msa0819680:intron 20.0%
!!! TTAGTAAAACTTTTGCTTTA+TGG - chr5_3:56440380-56440399 None:intergenic 20.0%
!!! TTTGGGATTCATTTTTATTA+AGG - chr5_3:56440479-56440498 None:intergenic 20.0%
!!! CAATACTCAAACTTTTATTT+GGG - chr5_3:56440496-56440515 None:intergenic 20.0%
!!! ACAATACTCAAACTTTTATT+TGG - chr5_3:56440497-56440516 None:intergenic 20.0%
!!! TGCTTTTTCTTTTTTTATCT+TGG + chr5_3:56440572-56440591 Msa0819680:intron 20.0%
!!! ACAAAATCGACTTAAAATTA+TGG - chr5_3:56441058-56441077 None:intergenic 20.0%
!!! TTGTTTTGTTTTTGTTTTGT+TGG + chr5_3:56441270-56441289 Msa0819680:three_prime_UTR 20.0%
!!! TTTATTTTTATTTTACCGGA+AGG + chr5_3:56441371-56441390 Msa0819680:three_prime_UTR 20.0%
! ATAAAATCGTTAACTTCTTC+TGG - chr5_3:56434940-56434959 None:intergenic 25.0%
!! TTTTATAAGTGAGTACACAT+TGG + chr5_3:56434954-56434973 Msa0819680:CDS 25.0%
! TTATTGGGAATAATAATCAG+AGG + chr5_3:56435229-56435248 Msa0819680:CDS 25.0%
!!! TTTTTCAAGCTGCTATTAAT+GGG + chr5_3:56435295-56435314 Msa0819680:CDS 25.0%
!!! ACCTTAATTTTTTTGACACT+TGG + chr5_3:56435697-56435716 Msa0819680:intron 25.0%
! TCCAAGTGTCAAAAAAATTA+AGG - chr5_3:56435701-56435720 None:intergenic 25.0%
!! TTCTTAGTTCTTTCACATTA+GGG + chr5_3:56435901-56435920 Msa0819680:intron 25.0%
! TTATATACTGTGGATCAAAT+AGG + chr5_3:56436162-56436181 Msa0819680:intron 25.0%
! AATATGTTATGGAACAGATT+TGG + chr5_3:56436308-56436327 Msa0819680:intron 25.0%
! AATGAAGACAGATTAAACTA+TGG - chr5_3:56436771-56436790 None:intergenic 25.0%
! TGATACATCATCATAGATAT+TGG + chr5_3:56436790-56436809 Msa0819680:intron 25.0%
!!! ATAGATATTGGTTCCTTAAA+AGG + chr5_3:56436802-56436821 Msa0819680:intron 25.0%
! TAATAACCAAGGTTACAAAA+AGG - chr5_3:56436852-56436871 None:intergenic 25.0%
! TTAATTAGTGAGGTAAAGTT+AGG - chr5_3:56436966-56436985 None:intergenic 25.0%
!!! ATTTTTTCTTCTTCGAAACA+TGG - chr5_3:56437038-56437057 None:intergenic 25.0%
!!! TTGTTTTTTGTCAGGAAAAA+TGG + chr5_3:56437142-56437161 Msa0819680:intron 25.0%
! GATTTAAAGAAGAACAAAGA+AGG + chr5_3:56437179-56437198 Msa0819680:CDS 25.0%
! TTGTTCGTTCTTCTTTAATT+TGG - chr5_3:56437237-56437256 None:intergenic 25.0%
! CCTTCAACTCTTTAAATAAA+TGG - chr5_3:56437696-56437715 None:intergenic 25.0%
! CCATTTATTTAAAGAGTTGA+AGG + chr5_3:56437693-56437712 Msa0819680:intron 25.0%
!! TATATACCTTGTTTGAAGTT+GGG - chr5_3:56437862-56437881 None:intergenic 25.0%
!! ATATATACCTTGTTTGAAGT+TGG - chr5_3:56437863-56437882 None:intergenic 25.0%
!! GAAAATGCTTAACTTTTACA+AGG - chr5_3:56438269-56438288 None:intergenic 25.0%
! AAATATGAAATTGTGTTTCG+AGG - chr5_3:56438315-56438334 None:intergenic 25.0%
! GTAAAATTTATGTGTGTCTA+CGG - chr5_3:56438358-56438377 None:intergenic 25.0%
! TTAAATAAACTGCCTTAATG+GGG - chr5_3:56438568-56438587 None:intergenic 25.0%
! CTTAAATAAACTGCCTTAAT+GGG - chr5_3:56438569-56438588 None:intergenic 25.0%
! ACTTAAATAAACTGCCTTAA+TGG - chr5_3:56438570-56438589 None:intergenic 25.0%
! TTAAGTACTTTAACACAACT+TGG + chr5_3:56438584-56438603 Msa0819680:intron 25.0%
!!! AGAGTGTCTTTCAATATTTT+TGG + chr5_3:56438668-56438687 Msa0819680:intron 25.0%
! ACATAAAGAAAGTGAGATAA+AGG + chr5_3:56438942-56438961 Msa0819680:CDS 25.0%
! AACTCCAAATAAAACAATGA+TGG + chr5_3:56438975-56438994 Msa0819680:CDS 25.0%
!!! GTTTCCATCATTGTTTTATT+TGG - chr5_3:56438982-56439001 None:intergenic 25.0%
! AACAAAACCTGAATATGAAA+AGG + chr5_3:56438999-56439018 Msa0819680:CDS 25.0%
! AAAAAATGGAATAGTTGAAC+TGG + chr5_3:56439062-56439081 Msa0819680:CDS 25.0%
! TTTCAATGTCTCAACAATAA+GGG - chr5_3:56439181-56439200 None:intergenic 25.0%
!! TTTTCAATGTCTCAACAATA+AGG - chr5_3:56439182-56439201 None:intergenic 25.0%
! ATTGAAAACGAGAATGATTA+AGG + chr5_3:56439194-56439213 Msa0819680:CDS 25.0%
! AAATGATGTGGGATATAAAA+TGG + chr5_3:56439343-56439362 Msa0819680:CDS 25.0%
!! AATGAATTGATGATACTATG+AGG + chr5_3:56439696-56439715 Msa0819680:intron 25.0%
! TATACACAATCTTCCTAATT+TGG + chr5_3:56440209-56440228 Msa0819680:intron 25.0%
! ATACACAATCTTCCTAATTT+GGG + chr5_3:56440210-56440229 Msa0819680:intron 25.0%
! ATTCTTCACCTAACAAATAA+TGG - chr5_3:56440331-56440350 None:intergenic 25.0%
! TTACAAGATCAAAGTATAGA+GGG - chr5_3:56441136-56441155 None:intergenic 25.0%
! ATTACAAGATCAAAGTATAG+AGG - chr5_3:56441137-56441156 None:intergenic 25.0%
! TCTATACTTTGATCTTGTAA+TGG + chr5_3:56441136-56441155 Msa0819680:CDS 25.0%
! ATAAATCAATTACATCCTTC+CGG - chr5_3:56441389-56441408 None:intergenic 25.0%
! ACTATCAGCAATTGTTTTCA+TGG - chr5_3:56434890-56434909 None:intergenic 30.0%
ATTACATGTAGCCATAGATT+TGG + chr5_3:56435065-56435084 Msa0819680:CDS 30.0%
ACATAATAATTTCGAGGCAT+TGG + chr5_3:56435131-56435150 Msa0819680:CDS 30.0%
TTAATAGCAGCTTGAAAAAG+AGG - chr5_3:56435294-56435313 None:intergenic 30.0%
!!! CTTTTTCAAGCTGCTATTAA+TGG + chr5_3:56435294-56435313 Msa0819680:CDS 30.0%
ATTTACCGAAATATTCTGCT+CGG - chr5_3:56435422-56435441 None:intergenic 30.0%
!!! TGTATGTTAGTTTTCAGTTG+TGG + chr5_3:56435841-56435860 Msa0819680:intron 30.0%
AATGTGAAAGAACTAAGAAG+AGG - chr5_3:56435900-56435919 None:intergenic 30.0%
! CTTCTTAGTTCTTTCACATT+AGG + chr5_3:56435900-56435919 Msa0819680:intron 30.0%
GTATTAATGAGTACTTACAG+TGG - chr5_3:56436473-56436492 None:intergenic 30.0%
!!! TATGACCTTATTGTTTTTGC+AGG - chr5_3:56436577-56436596 None:intergenic 30.0%
AAGGTCATATTTGAGAAAGA+TGG + chr5_3:56436588-56436607 Msa0819680:CDS 30.0%
AACTTCATCTTGTTAGAATC+TGG - chr5_3:56436622-56436641 None:intergenic 30.0%
ACAGATTAAACTATGGTTTC+AGG - chr5_3:56436764-56436783 None:intergenic 30.0%
!! CTTAAGTTGTTGTCCTTTTA+AGG - chr5_3:56436818-56436837 None:intergenic 30.0%
! AAAAAGCCTTTTTGTAACCT+TGG + chr5_3:56436843-56436862 Msa0819680:intron 30.0%
! TATTATTTACCCGTGAGTTT+TGG + chr5_3:56436867-56436886 Msa0819680:intron 30.0%
TGACTTTGCATTATGTTGTA+CGG - chr5_3:56436913-56436932 None:intergenic 30.0%
TCGGTACTAATTAATTAGTG+AGG - chr5_3:56436976-56436995 None:intergenic 30.0%
ACACATATCGTTAAAGTTGT+TGG - chr5_3:56437089-56437108 None:intergenic 30.0%
AGACTTGACAAATTCAAGAA+AGG - chr5_3:56437390-56437409 None:intergenic 30.0%
AAAATAGGATAGGATAGGAT+AGG + chr5_3:56437622-56437641 Msa0819680:intron 30.0%
GATTGTTCCCTTGAAAAATT+TGG + chr5_3:56438209-56438228 Msa0819680:intron 30.0%
!! GGCAAATCCAAATTTTTCAA+GGG - chr5_3:56438219-56438238 None:intergenic 30.0%
! TGGCAAATCCAAATTTTTCA+AGG - chr5_3:56438220-56438239 None:intergenic 30.0%
AGTTCATGGGAAAATATGAT+TGG - chr5_3:56438240-56438259 None:intergenic 30.0%
TACAAGGATTCAAAGTTCAT+GGG - chr5_3:56438253-56438272 None:intergenic 30.0%
TTACAAGGATTCAAAGTTCA+TGG - chr5_3:56438254-56438273 None:intergenic 30.0%
! ACTTCTTCCTTTTCATATTC+AGG - chr5_3:56439009-56439028 None:intergenic 30.0%
AAAGGAAGAAGTTGACAAAA+AGG + chr5_3:56439017-56439036 Msa0819680:CDS 30.0%
!!! TTTTTTGCTGCAACCAAAAA+TGG - chr5_3:56439048-56439067 None:intergenic 30.0%
!!! TTTTTGGTTGCAGCAAAAAA+TGG + chr5_3:56439048-56439067 Msa0819680:CDS 30.0%
TTCAATGTCTCAACAATAAG+GGG - chr5_3:56439180-56439199 None:intergenic 30.0%
!! AGATGAACTTTGGAATAACT+TGG + chr5_3:56439224-56439243 Msa0819680:CDS 30.0%
GGAGAATACAATATTGCATT+TGG + chr5_3:56439266-56439285 Msa0819680:CDS 30.0%
TATATCCCACATCATTTGTA+AGG - chr5_3:56439340-56439359 None:intergenic 30.0%
!! TTTTAAAAAGGGAGCTTCTA+CGG + chr5_3:56439407-56439426 Msa0819680:intron 30.0%
!! TACAAGTACTGTTTTATCGT+TGG + chr5_3:56439559-56439578 Msa0819680:intron 30.0%
ATCTTAAGTGTTACACTTTG+TGG + chr5_3:56439615-56439634 Msa0819680:intron 30.0%
TCTTAAGTGTTACACTTTGT+GGG + chr5_3:56439616-56439635 Msa0819680:intron 30.0%
TGTTACGCTTAAAACAAAGT+AGG + chr5_3:56439640-56439659 Msa0819680:intron 30.0%
!! ATGTCGGATTGACTTATTTT+AGG + chr5_3:56439902-56439921 Msa0819680:intron 30.0%
TTAAAAAAGGAAGGATGAAG+TGG + chr5_3:56440133-56440152 Msa0819680:intron 30.0%
ATATTGAACAAAGATTTGGG+AGG + chr5_3:56440251-56440270 Msa0819680:intron 30.0%
TATTGAACAAAGATTTGGGA+GGG + chr5_3:56440252-56440271 Msa0819680:intron 30.0%
!! TACTTTAGAACCAACAAAGA+GGG + chr5_3:56440630-56440649 Msa0819680:CDS 30.0%
! TGATATTTTTCCCTCTTTGT+TGG - chr5_3:56440643-56440662 None:intergenic 30.0%
TGAAACAAACAATGAAGCAA+TGG - chr5_3:56441006-56441025 None:intergenic 30.0%
AACAAGTTGTTGCGTAAATT+GGG - chr5_3:56441082-56441101 None:intergenic 30.0%
AAACAAGTTGTTGCGTAAAT+TGG - chr5_3:56441083-56441102 None:intergenic 30.0%
!!! TGTAATGGCTATTTTAACCA+AGG + chr5_3:56441151-56441170 Msa0819680:CDS 30.0%
!!! TATTTTAACCAAGGTTCCAA+CGG + chr5_3:56441160-56441179 Msa0819680:CDS 30.0%
TTGGTGTGATTATGTTATGT+TGG + chr5_3:56441289-56441308 Msa0819680:three_prime_UTR 30.0%
TGGTGTGATTATGTTATGTT+GGG + chr5_3:56441290-56441309 Msa0819680:three_prime_UTR 30.0%
TCTTCTGGTGAATCAATGTT+GGG - chr5_3:56434925-56434944 None:intergenic 35.0%
TTCTTCTGGTGAATCAATGT+TGG - chr5_3:56434926-56434945 None:intergenic 35.0%
ATAAGTGAGTACACATTGGA+AGG + chr5_3:56434958-56434977 Msa0819680:CDS 35.0%
TAAGTGAGTACACATTGGAA+GGG + chr5_3:56434959-56434978 Msa0819680:CDS 35.0%
ATCTTCTTCGTCCAAATCTA+TGG - chr5_3:56435079-56435098 None:intergenic 35.0%
!! TAATTTCGAGGCATTGGAAA+TGG + chr5_3:56435137-56435156 Msa0819680:CDS 35.0%
TTGGAAATGGTGAATGAACA+TGG + chr5_3:56435150-56435169 Msa0819680:CDS 35.0%
! ATTGCATTTTGCAGCATCAA+GGG + chr5_3:56435182-56435201 Msa0819680:CDS 35.0%
TAGTTCTTTCACATTAGGGA+TGG + chr5_3:56435905-56435924 Msa0819680:intron 35.0%
! TAGTTCGAGGATTAACTTGA+CGG - chr5_3:56436090-56436109 None:intergenic 35.0%
GGAGAATTAATGATAGTTCG+AGG - chr5_3:56436103-56436122 None:intergenic 35.0%
! AAGATTGCTTGCACTTTTGA+AGG - chr5_3:56436427-56436446 None:intergenic 35.0%
AAAGTGCAAGCAATCTTTCA+TGG + chr5_3:56436430-56436449 Msa0819680:CDS 35.0%
ATGAGTACTTACAGTGGTAT+AGG - chr5_3:56436467-56436486 None:intergenic 35.0%
TGGATCCTGCAAAAACAATA+AGG + chr5_3:56436569-56436588 Msa0819680:CDS 35.0%
GTCATATTTGAGAAAGATGG+AGG + chr5_3:56436591-56436610 Msa0819680:CDS 35.0%
TATGTCATATGCCATCAGTA+CGG + chr5_3:56436687-56436706 Msa0819680:intron 35.0%
ACCAATAAAAACCGTACTGA+TGG - chr5_3:56436701-56436720 None:intergenic 35.0%
TCACGGGTAAATAATAACCA+AGG - chr5_3:56436863-56436882 None:intergenic 35.0%
GGTAACTTGATTCTTGTAGT+CGG - chr5_3:56436995-56437014 None:intergenic 35.0%
CGTTAAAGTTGTTGGATTCT+AGG - chr5_3:56437081-56437100 None:intergenic 35.0%
! GATCATTTGATGGATCTTCT+GGG - chr5_3:56437205-56437224 None:intergenic 35.0%
! TCTTGTTTGATGGATCTTCT+GGG - chr5_3:56437262-56437281 None:intergenic 35.0%
! ATCTTGTTTGATGGATCTTC+TGG - chr5_3:56437263-56437282 None:intergenic 35.0%
TCGTTCTTGTTCTTTCTTCT+GGG - chr5_3:56437327-56437346 None:intergenic 35.0%
GAACGAGAGAAATATCATGT+TGG + chr5_3:56437341-56437360 Msa0819680:CDS 35.0%
TTTGATCCCAACTTCAAACA+AGG + chr5_3:56437853-56437872 Msa0819680:CDS 35.0%
TTGTGTTTCGAGGACATTAT+GGG - chr5_3:56438305-56438324 None:intergenic 35.0%
ATTGTGTTTCGAGGACATTA+TGG - chr5_3:56438306-56438325 None:intergenic 35.0%
TTATATGAGCACATCTTGCA+AGG + chr5_3:56438380-56438399 Msa0819680:intron 35.0%
TATATGAGCACATCTTGCAA+GGG + chr5_3:56438381-56438400 Msa0819680:intron 35.0%
TATGTGTTTGAGGACGATTA+GGG - chr5_3:56438429-56438448 None:intergenic 35.0%
GTCAGATTTGTATGTGTTTG+AGG - chr5_3:56438439-56438458 None:intergenic 35.0%
! CATGTTGAGGATGTTTTTCT+TGG - chr5_3:56438506-56438525 None:intergenic 35.0%
CTTGACGATTTCAAACATGT+TGG + chr5_3:56438534-56438553 Msa0819680:intron 35.0%
ACAACTTGGTTGCAATATCA+AGG + chr5_3:56438598-56438617 Msa0819680:intron 35.0%
CAACTTGGTTGCAATATCAA+GGG + chr5_3:56438599-56438618 Msa0819680:intron 35.0%
TTAATTGTCTACCTTCACTG+AGG + chr5_3:56438638-56438657 Msa0819680:intron 35.0%
ACAATTCAAATATTCCCGCA+TGG + chr5_3:56438708-56438727 Msa0819680:intron 35.0%
TTCTTGTTCATCGAACCTAT+CGG - chr5_3:56438917-56438936 None:intergenic 35.0%
!!! TGTTTTATTTGGAGTTGACG+TGG - chr5_3:56438971-56438990 None:intergenic 35.0%
! CAAAAAGGAGACACCATTTT+TGG + chr5_3:56439032-56439051 Msa0819680:CDS 35.0%
! CTTTGAGTTTGTGTCATGAA+TGG - chr5_3:56439118-56439137 None:intergenic 35.0%
AGGACTCAAAAGATGAACTT+TGG + chr5_3:56439214-56439233 Msa0819680:CDS 35.0%
! GAATAACTTGGTTCTTGCAA+TGG + chr5_3:56439236-56439255 Msa0819680:CDS 35.0%
TTCTGCCTTACAAATGATGT+GGG + chr5_3:56439332-56439351 Msa0819680:CDS 35.0%
GTGGGATATAAAATGGTTTC+AGG + chr5_3:56439350-56439369 Msa0819680:CDS 35.0%
CTTAAGTGTTACACTTTGTG+GGG + chr5_3:56439617-56439636 Msa0819680:intron 35.0%
! AGTCATGAGAATGACTTTTC+TGG - chr5_3:56439797-56439816 None:intergenic 35.0%
CTATCGACATAACATTTGTG+AGG + chr5_3:56439929-56439948 Msa0819680:intron 35.0%
! ACATAAGTTTGGGGTATGTT+TGG + chr5_3:56440091-56440110 Msa0819680:intron 35.0%
! CATAAGTTTGGGGTATGTTT+GGG + chr5_3:56440092-56440111 Msa0819680:intron 35.0%
!!! AGGAGGGTTTTAAAAAAGGA+AGG + chr5_3:56440124-56440143 Msa0819680:intron 35.0%
TGGAAGAAATTGAGGACTTT+GGG + chr5_3:56440153-56440172 Msa0819680:intron 35.0%
!! GTTCTAAAGTAGAAGTGTTG+TGG - chr5_3:56440621-56440640 None:intergenic 35.0%
!! CTACTTTAGAACCAACAAAG+AGG + chr5_3:56440629-56440648 Msa0819680:CDS 35.0%
TTATAAAAGACAGCAGTGAC+TGG + chr5_3:56440694-56440713 Msa0819680:CDS 35.0%
! TTTGCCATTTCTTCGCTTAT+CGG + chr5_3:56440855-56440874 Msa0819680:CDS 35.0%
TTCGAGAAGTGAGAATTGAA+AGG - chr5_3:56440914-56440933 None:intergenic 35.0%
CAAATCTCGACGAAAATCTT+TGG - chr5_3:56440943-56440962 None:intergenic 35.0%
TTGTTTGTTTCATTCTGCAG+TGG + chr5_3:56441014-56441033 Msa0819680:CDS 35.0%
AATCAAGTGTTTCCATAGTG+TGG + chr5_3:56441207-56441226 Msa0819680:exon 35.0%
ATATTTCCAACACCACACTA+TGG - chr5_3:56441222-56441241 None:intergenic 35.0%
GGTGTGATTATGTTATGTTG+GGG + chr5_3:56441291-56441310 Msa0819680:three_prime_UTR 35.0%
AGTACACATTGGAAGGGAAA+TGG + chr5_3:56434965-56434984 Msa0819680:CDS 40.0%
GTACACATTGGAAGGGAAAT+GGG + chr5_3:56434966-56434985 Msa0819680:CDS 40.0%
CTTGATGCTGCAAAATGCAA+TGG - chr5_3:56435183-56435202 None:intergenic 40.0%
! CATTGCATTTTGCAGCATCA+AGG + chr5_3:56435181-56435200 Msa0819680:CDS 40.0%
! TTGCATTTTGCAGCATCAAG+GGG + chr5_3:56435183-56435202 Msa0819680:CDS 40.0%
CAAGATCTTGTACGAGAAGA+TGG + chr5_3:56435372-56435391 Msa0819680:CDS 40.0%
GCTATCCGAGCAGAATATTT+CGG + chr5_3:56435414-56435433 Msa0819680:CDS 40.0%
GACAAATTAAGGCATACTCG+TGG + chr5_3:56436540-56436559 Msa0819680:intron 40.0%
!!! ATTGTTTTTGCAGGATCCAG+TGG - chr5_3:56436568-56436587 None:intergenic 40.0%
! GCCATCAGTACGGTTTTTAT+TGG + chr5_3:56436697-56436716 Msa0819680:intron 40.0%
! CGATCATTTGATGGATCTTC+TGG - chr5_3:56437206-56437225 None:intergenic 40.0%
GACTGACTACGATCATTTGA+TGG - chr5_3:56437215-56437234 None:intergenic 40.0%
TCCATCAAACAAGATCCAGA+AGG + chr5_3:56437268-56437287 Msa0819680:CDS 40.0%
! TCCTTCTGGATCTTGTTTGA+TGG - chr5_3:56437272-56437291 None:intergenic 40.0%
!!! CTGAGTTTTGTTCTTCCTTC+TGG - chr5_3:56437286-56437305 None:intergenic 40.0%
!! TTCTTCTGGGTCTTGTTTGA+TGG - chr5_3:56437314-56437333 None:intergenic 40.0%
CTCGTTCTTGTTCTTTCTTC+TGG - chr5_3:56437328-56437347 None:intergenic 40.0%
TCTGCATATGTACACACTCT+TGG + chr5_3:56437407-56437426 Msa0819680:CDS 40.0%
GTAGGCACTAATTTCGTCTT+CGG - chr5_3:56437511-56437530 None:intergenic 40.0%
TAGGATAGGATAGGATAGGA+TGG + chr5_3:56437626-56437645 Msa0819680:intron 40.0%
! CTGCAAAGAAGAAGCACATA+TGG + chr5_3:56437725-56437744 Msa0819680:CDS 40.0%
!! TCAGCTGTTGAAGGCATTAA+TGG + chr5_3:56437753-56437772 Msa0819680:CDS 40.0%
! TTAGGGTTTAGGGTTTCAAG+AGG - chr5_3:56438412-56438431 None:intergenic 40.0%
TTGAGGACGATTAGGGTTTA+GGG - chr5_3:56438422-56438441 None:intergenic 40.0%
TTTGAGGACGATTAGGGTTT+AGG - chr5_3:56438423-56438442 None:intergenic 40.0%
GTATGTGTTTGAGGACGATT+AGG - chr5_3:56438430-56438449 None:intergenic 40.0%
CGCGAAATGTGCTTCTTTAA+CGG - chr5_3:56438461-56438480 None:intergenic 40.0%
! TAAAGAAGCACATTTCGCGA+AGG + chr5_3:56438462-56438481 Msa0819680:intron 40.0%
TCAAGTTTGCATGCATGTTG+AGG - chr5_3:56438519-56438538 None:intergenic 40.0%
TTCAAATATTCCCGCATGGA+AGG + chr5_3:56438712-56438731 Msa0819680:intron 40.0%
! CTTGGTTCTTGCAATGGATA+AGG + chr5_3:56439242-56439261 Msa0819680:CDS 40.0%
AATATTGCATTTGGCAGCAG+AGG + chr5_3:56439275-56439294 Msa0819680:CDS 40.0%
GTTCTGCCTTACAAATGATG+TGG + chr5_3:56439331-56439350 Msa0819680:CDS 40.0%
TAGTAATGCGTGCAACATCT+TGG + chr5_3:56439533-56439552 Msa0819680:intron 40.0%
TGATGCCATTGTACAAAGAG+TGG + chr5_3:56439729-56439748 Msa0819680:intron 40.0%
GATGCCATTGTACAAAGAGT+GGG + chr5_3:56439730-56439749 Msa0819680:intron 40.0%
ATGCCATTGTACAAAGAGTG+GGG + chr5_3:56439731-56439750 Msa0819680:intron 40.0%
! TTGGGGTATGTTTGGGATTT+AGG + chr5_3:56440099-56440118 Msa0819680:intron 40.0%
! GTATGTTTGGGATTTAGGAG+AGG + chr5_3:56440104-56440123 Msa0819680:intron 40.0%
!!! GGAGAGGAGGGTTTTAAAAA+AGG + chr5_3:56440120-56440139 Msa0819680:intron 40.0%
GGATGAAGTGGAAGAAATTG+AGG + chr5_3:56440145-56440164 Msa0819680:intron 40.0%
GTGGAAGAAATTGAGGACTT+TGG + chr5_3:56440152-56440171 Msa0819680:intron 40.0%
AAGAAATTGAGGACTTTGGG+AGG + chr5_3:56440156-56440175 Msa0819680:intron 40.0%
! AGAAATTGAGGACTTTGGGA+GGG + chr5_3:56440157-56440176 Msa0819680:intron 40.0%
CACAATCTTCCTAATTTGGG+AGG + chr5_3:56440213-56440232 Msa0819680:intron 40.0%
!! CTTTTGAGTCCTCCCAAATT+AGG - chr5_3:56440225-56440244 None:intergenic 40.0%
!! AGTAGAAGTGTTGTGGTACA+AGG - chr5_3:56440614-56440633 None:intergenic 40.0%
TAATACTGGACTGCCTTCAT+CGG - chr5_3:56440811-56440830 None:intergenic 40.0%
GATAAGCGAAGAAATGGCAA+AGG - chr5_3:56440856-56440875 None:intergenic 40.0%
AAGTCCGATAAGCGAAGAAA+TGG - chr5_3:56440862-56440881 None:intergenic 40.0%
TTGCCACTGAAACTTCTTCT+TGG + chr5_3:56440960-56440979 Msa0819680:CDS 40.0%
TGCCACTGAAACTTCTTCTT+GGG + chr5_3:56440961-56440980 Msa0819680:CDS 40.0%
AACCCAAGAAGAAGTTTCAG+TGG - chr5_3:56440966-56440985 None:intergenic 40.0%
GTATAGAGGGAATTGTGCAA+CGG - chr5_3:56441123-56441142 None:intergenic 40.0%
! AGTGCTTTGTGAGCTTGTTC+TGG - chr5_3:56435021-56435040 None:intergenic 45.0%
GCACTTATCTCTGAATCAGC+TGG + chr5_3:56435036-56435055 Msa0819680:CDS 45.0%
AGACTCCAGATTTGAACTCG+CGG - chr5_3:56435813-56435832 None:intergenic 45.0%
CACATTAGGGATGGTTGCTT+TGG + chr5_3:56435914-56435933 Msa0819680:intron 45.0%
AGCACACAGCTGAACAAAGA+AGG + chr5_3:56436363-56436382 Msa0819680:CDS 45.0%
TTTGAAGGCTGAAGGTCTAG+TGG - chr5_3:56436412-56436431 None:intergenic 45.0%
!! CTTGCACTTTTGAAGGCTGA+AGG - chr5_3:56436420-56436439 None:intergenic 45.0%
TGCAGAGGATCCAAAACTCA+CGG - chr5_3:56436880-56436899 None:intergenic 45.0%
!! TGTACACACTCTTGGCCTTA+CGG + chr5_3:56437415-56437434 Msa0819680:CDS 45.0%
TGTACATACCTACTCCCGTA+AGG - chr5_3:56437433-56437452 None:intergenic 45.0%
ATGGAGTAGTCAGCTGTTGA+AGG + chr5_3:56437744-56437763 Msa0819680:CDS 45.0%
AAGGTGGTCAACCAACTGAT+AGG + chr5_3:56437803-56437822 Msa0819680:CDS 45.0%
AGGTGGTCAACCAACTGATA+GGG + chr5_3:56437804-56437823 Msa0819680:CDS 45.0%
! CGATCGATTTCCCTATCAGT+TGG - chr5_3:56437817-56437836 None:intergenic 45.0%
TTTCGCGAAGGAAAGTTCTG+AGG + chr5_3:56438474-56438493 Msa0819680:intron 45.0%
TTGGATCACGTTCCCCATTA+AGG + chr5_3:56438553-56438572 Msa0819680:intron 45.0%
GTCTACCTTCACTGAGGAAA+AGG + chr5_3:56438644-56438663 Msa0819680:intron 45.0%
! CTCTACCTTTTCCTCAGTGA+AGG - chr5_3:56438652-56438671 None:intergenic 45.0%
GGATTATATGCCTTCCATGC+GGG - chr5_3:56438725-56438744 None:intergenic 45.0%
CGGATTATATGCCTTCCATG+CGG - chr5_3:56438726-56438745 None:intergenic 45.0%
CCAGTGTCAAATGCAATGGA+AGG - chr5_3:56438885-56438904 None:intergenic 45.0%
CCTTCCATTGCATTTGACAC+TGG + chr5_3:56438882-56438901 Msa0819680:intron 45.0%
TTTGTGTCATGAATGGCGCT+TGG - chr5_3:56439111-56439130 None:intergenic 45.0%
GGTTCTTGCAATGGATAAGG+AGG + chr5_3:56439245-56439264 Msa0819680:CDS 45.0%
ACACCCCACTCTTTGTACAA+TGG - chr5_3:56439737-56439756 None:intergenic 45.0%
! TGTTTGGGATTTAGGAGAGG+AGG + chr5_3:56440107-56440126 Msa0819680:intron 45.0%
! GTTTGGGATTTAGGAGAGGA+GGG + chr5_3:56440108-56440127 Msa0819680:intron 45.0%
! GAAATTGAGGACTTTGGGAG+GGG + chr5_3:56440158-56440177 Msa0819680:intron 45.0%
! AAATTGAGGACTTTGGGAGG+GGG + chr5_3:56440159-56440178 Msa0819680:intron 45.0%
AAAGATTTGGGAGGGTTTGC+AGG + chr5_3:56440260-56440279 Msa0819680:intron 45.0%
AAGATTTGGGAGGGTTTGCA+GGG + chr5_3:56440261-56440280 Msa0819680:intron 45.0%
! TGACTGGCTAAAAGACACGT+CGG + chr5_3:56440710-56440729 Msa0819680:CDS 45.0%
GAAGGCAGTCCAGTATTAGA+AGG + chr5_3:56440813-56440832 Msa0819680:CDS 45.0%
GGACTTTGCTTCTCTGTTAC+TGG + chr5_3:56440876-56440895 Msa0819680:CDS 45.0%
GTTCCAACGGCAACTGATAA+AGG + chr5_3:56441173-56441192 Msa0819680:CDS 45.0%
TCACCTTTATCAGTTGCCGT+TGG - chr5_3:56441179-56441198 None:intergenic 45.0%
GTGTTTCCATAGTGTGGTGT+TGG + chr5_3:56441213-56441232 Msa0819680:three_prime_UTR 45.0%
!!! AATTTTTATTTTTATTTTAC+CGG + chr5_3:56441367-56441386 Msa0819680:three_prime_UTR 5.0%
TTCACCCGCGAGTTCAAATC+TGG + chr5_3:56435805-56435824 Msa0819680:intron 50.0%
GACTCCAGATTTGAACTCGC+GGG - chr5_3:56435812-56435831 None:intergenic 50.0%
CTTTGTTCAGCTGTGTGCTG+AGG - chr5_3:56436362-56436381 None:intergenic 50.0%
CTAGTGGCAAGGACTTTGAG+AGG - chr5_3:56436396-56436415 None:intergenic 50.0%
GCAGAGGATCCAAAACTCAC+GGG - chr5_3:56436879-56436898 None:intergenic 50.0%
!! GTACACACTCTTGGCCTTAC+GGG + chr5_3:56437416-56437435 Msa0819680:CDS 50.0%
AGACCTTACGCAGCATTCAC+TGG + chr5_3:56437778-56437797 Msa0819680:CDS 50.0%
TCACCAGTGAATGCTGCGTA+AGG - chr5_3:56437784-56437803 None:intergenic 50.0%
TACGCAGCATTCACTGGTGA+AGG + chr5_3:56437784-56437803 Msa0819680:CDS 50.0%
CCTGCCAGTGTCAAATGCAA+TGG - chr5_3:56438889-56438908 None:intergenic 50.0%
CCATTGCATTTGACACTGGC+AGG + chr5_3:56438886-56438905 Msa0819680:intron 50.0%
CACTAGGTGAGGGTAAACCT+TGG + chr5_3:56439298-56439317 Msa0819680:CDS 50.0%
GGTAAACCTTGGCAGATTGC+TGG + chr5_3:56439309-56439328 Msa0819680:CDS 50.0%
CTTAAACCCCATGCGCATGT+CGG + chr5_3:56439886-56439905 Msa0819680:intron 50.0%
AGTCAATCCGACATGCGCAT+GGG - chr5_3:56439896-56439915 None:intergenic 50.0%
AAGTCAATCCGACATGCGCA+TGG - chr5_3:56439897-56439916 None:intergenic 50.0%
! AATTGAGGACTTTGGGAGGG+GGG + chr5_3:56440160-56440179 Msa0819680:intron 50.0%
GCAGGCTTGCCTTCTAATAC+TGG - chr5_3:56440825-56440844 None:intergenic 50.0%
!! ATGGCAAAGGCATCGAATGC+AGG - chr5_3:56440843-56440862 None:intergenic 50.0%
GCAACGGCATAGAAAGTCAC+AGG - chr5_3:56441107-56441126 None:intergenic 50.0%
ATCAGTTGCCGTTGGAACCT+TGG - chr5_3:56441171-56441190 None:intergenic 50.0%
AGGCTGAAGGTCTAGTGGCA+AGG - chr5_3:56436407-56436426 None:intergenic 55.0%
AGGCATACTCGTGGAACCAC+TGG + chr5_3:56436549-56436568 Msa0819680:intron 55.0%
TACGGTGCACATAGCTGCAG+AGG - chr5_3:56436895-56436914 None:intergenic 55.0%
!! ACTCTTGGCCTTACGGGAGT+AGG + chr5_3:56437422-56437441 Msa0819680:CDS 55.0%
GCAGCATTCACTGGTGAAGG+TGG + chr5_3:56437787-56437806 Msa0819680:CDS 55.0%
CACTGGCAGGTGAAACCGAT+AGG + chr5_3:56438899-56438918 Msa0819680:intron 55.0%
!! CATTTGGCAGCAGAGGCACT+AGG + chr5_3:56439282-56439301 Msa0819680:CDS 55.0%
GCAGAACCAGCAATCTGCCA+AGG - chr5_3:56439318-56439337 None:intergenic 55.0%
GTCAATCCGACATGCGCATG+GGG - chr5_3:56439895-56439914 None:intergenic 55.0%
GAATCCTGCTCCGTCGTATC+TGG + chr5_3:56440732-56440751 Msa0819680:CDS 55.0%
GGCTACAAGGCCAGATACGA+CGG - chr5_3:56440745-56440764 None:intergenic 55.0%
!! GTCGTATCTGGCCTTGTAGC+CGG + chr5_3:56440744-56440763 Msa0819680:CDS 55.0%
! CGAAGGAAACACCGGCTACA+AGG - chr5_3:56440758-56440777 None:intergenic 55.0%
TGCTGTGGCGAAGGAAACAC+CGG - chr5_3:56440766-56440785 None:intergenic 55.0%
!! TACTTGGCTTGCTGTGGCGA+AGG - chr5_3:56440775-56440794 None:intergenic 55.0%
!! GCAGCAGAGGCACTAGGTGA+GGG + chr5_3:56439288-56439307 Msa0819680:CDS 60.0%
! ACTTTGGGAGGGGGGAGCTT+TGG + chr5_3:56440168-56440187 Msa0819680:intron 60.0%
! CTTTGGGAGGGGGGAGCTTT+GGG + chr5_3:56440169-56440188 Msa0819680:intron 60.0%
TTGGGAGGGTTTGCAGGGCT+TGG + chr5_3:56440266-56440285 Msa0819680:intron 60.0%
AAGGCCAGATACGACGGAGC+AGG - chr5_3:56440739-56440758 None:intergenic 60.0%
GCCACAGCAAGCCAAGTACC+CGG + chr5_3:56440777-56440796 Msa0819680:CDS 60.0%
ACAGCAAGCCAAGTACCCGG+CGG + chr5_3:56440780-56440799 Msa0819680:CDS 60.0%
!! GGCAGCAGAGGCACTAGGTG+AGG + chr5_3:56439287-56439306 Msa0819680:CDS 65.0%
!! GCCGGGTACTTGGCTTGCTG+TGG - chr5_3:56440781-56440800 None:intergenic 65.0%
! CCTTCATCGGTTGTGCCGCC+GGG - chr5_3:56440798-56440817 None:intergenic 65.0%
! GCCTTCATCGGTTGTGCCGC+CGG - chr5_3:56440799-56440818 None:intergenic 65.0%
CGGTTGTGCCGCCGGGTACT+TGG - chr5_3:56440791-56440810 None:intergenic 70.0%
CCCGGCGGCACAACCGATGA+AGG + chr5_3:56440795-56440814 Msa0819680:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 56434814 56441448 56434814 ID=Msa0819680;Name=Msa0819680
chr5_3 mRNA 56434814 56441448 56434814 ID=Msa0819680-mRNA-1;Parent=Msa0819680;Name=Msa0819680-mRNA-1;_AED=0.30;_eAED=0.30;_QI=75|1|1|1|1|1|7|240|786
chr5_3 exon 56434814 56435435 56434814 ID=Msa0819680-mRNA-1:exon:17042;Parent=Msa0819680-mRNA-1
chr5_3 exon 56436325 56436474 56436325 ID=Msa0819680-mRNA-1:exon:17043;Parent=Msa0819680-mRNA-1
chr5_3 exon 56436551 56436685 56436551 ID=Msa0819680-mRNA-1:exon:17044;Parent=Msa0819680-mRNA-1
chr5_3 exon 56437156 56437443 56437156 ID=Msa0819680-mRNA-1:exon:17045;Parent=Msa0819680-mRNA-1
chr5_3 exon 56437707 56437874 56437707 ID=Msa0819680-mRNA-1:exon:17046;Parent=Msa0819680-mRNA-1
chr5_3 exon 56438908 56439371 56438908 ID=Msa0819680-mRNA-1:exon:17047;Parent=Msa0819680-mRNA-1
chr5_3 exon 56440600 56441448 56440600 ID=Msa0819680-mRNA-1:exon:17048;Parent=Msa0819680-mRNA-1
chr5_3 five_prime_UTR 56434814 56434888 56434814 ID=Msa0819680-mRNA-1:five_prime_utr;Parent=Msa0819680-mRNA-1
chr5_3 CDS 56434889 56435435 56434889 ID=Msa0819680-mRNA-1:cds;Parent=Msa0819680-mRNA-1
chr5_3 CDS 56436325 56436474 56436325 ID=Msa0819680-mRNA-1:cds;Parent=Msa0819680-mRNA-1
chr5_3 CDS 56436551 56436685 56436551 ID=Msa0819680-mRNA-1:cds;Parent=Msa0819680-mRNA-1
chr5_3 CDS 56437156 56437443 56437156 ID=Msa0819680-mRNA-1:cds;Parent=Msa0819680-mRNA-1
chr5_3 CDS 56437707 56437874 56437707 ID=Msa0819680-mRNA-1:cds;Parent=Msa0819680-mRNA-1
chr5_3 CDS 56438908 56439371 56438908 ID=Msa0819680-mRNA-1:cds;Parent=Msa0819680-mRNA-1
chr5_3 CDS 56440600 56441208 56440600 ID=Msa0819680-mRNA-1:cds;Parent=Msa0819680-mRNA-1
chr5_3 three_prime_UTR 56441209 56441448 56441209 ID=Msa0819680-mRNA-1:three_prime_utr;Parent=Msa0819680-mRNA-1
Gene Sequence

>Msa0819680

ATGAAAACAATTGCTGATAGTGAGAACATATTACCCAACATTGATTCACCAGAAGAAGTTAACGATTTTATAAGTGAGTACACATTGGAAGGGAAATGGGAAAATGTTAAATTGTTGTACGAAAAATTTCCAGAACAAGCTCACAAAGCACTTATCTCTGAATCAGCTGGCACTGCATTACATGTAGCCATAGATTTGGACGAAGAAGATGTTGTCAACGAGCTTGTGAATGCAATTTTAACACATAATAATTTCGAGGCATTGGAAATGGTGAATGAACATGGAGACACACCATTGCATTTTGCAGCATCAAGGGGTTTTGCTAAAATATGTAAGTGTATTATTGGGAATAATAATCAGAGGATAGATTTGTTGAGTCTTAAAAATAAAGATGGTGAGACACCTCTTTTTCAAGCTGCTATTAATGGGAGAAAACAAGCTTTTGCTTATCTTGCTCATATTTCTGAAGACATTGTCGATTTGCAAGATCTTGTACGAGAAGATGGTGATAGTATTCTTCACACTGCTATCCGAGCAGAATATTTCGATTTGGCTGTGATTATAGTAAATCAGTATGATTACCTCAGCACACAGCTGAACAAAGAAGGATCAACTCCTCTCAAAGTCCTTGCCACTAGACCTTCAGCCTTCAAAAGTGCAAGCAATCTTTCATGGTATAAGCGAATCCTATACCACTGCATACTCGTGGAACCACTGGATCCTGCAAAAACAATAAGGTCATATTTGAGAAAGATGGAGGCTCGTCCAGATTCTAACAAGATGAAGTTACCAAATAACTATACCACTTTATATGATTTCTTTTCTATATTTGGAAAAATGGTCACAATCCATTTAGATTTAAAGAAGAACAAAGAAGGCCCAGAAGATCCATCAAATGATCGTAGTCAGTCCAAATTAAAGAAGAACGAACAAGACCCAGAAGATCCATCAAACAAGATCCAGAAGGAAGAACAAAACTCAGAAGATCCATCAAACAAGACCCAGAAGAAAGAACAAGAACGAGAGAAATATCATGTTGGATTTTTGCCAAAAAATTATGAAACCTTTCTTGAATTTGTCAAGTCTGCATATGTACACACTCTTGGCCTTACGGGAGTAGAGTTGAAGGATGTAAAGACTGCAAAGAAGAAGCACATATGGAGTAGTCAGCTGTTGAAGGCATTAATGGAAAGACCTTACGCAGCATTCACTGGTGAAGGTGGTCAACCAACTGATAGGGAAATCGATCGTGATATTTATAATATTTTTGATCCCAACTTCAAACAAGGTGAAACCGATAGGTTCGATGAACAAGAACAAAAACATAAAGAAAGTGAGATAAAGGAAGCCACGTCAACTCCAAATAAAACAATGATGGAAACAAAACCTGAATATGAAAAGGAAGAAGTTGACAAAAAGGAGACACCATTTTTGGTTGCAGCAAAAAATGGAATAGTTGAACTGGTTAACGAAATTCTAGACAAAATACCAAGCGCCATTCATGACACAAACTCAAAGAAAGAAAATGTATTGCTTGTTGCAGTGAAGTCAAGACAACCCCTTATTGTTGAGACATTGAAAACGAGAATGATTAAGGACTCAAAAGATGAACTTTGGAATAACTTGGTTCTTGCAATGGATAAGGAGGAGAATACAATATTGCATTTGGCAGCAGAGGCACTAGGTGAGGGTAAACCTTGGCAGATTGCTGGTTCTGCCTTACAAATGATGTGGGATATAAAATGGTTTCAGTATATCAAAAGCCTTGTACCACAACACTTCTACTTTAGAACCAACAAAGAGGGAAAAATATCAAGTGAAATTTTCAAGAAATCACACGAAGATCTTATAAAAGACAGCAGTGACTGGCTAAAAGACACGTCGGAATCCTGCTCCGTCGTATCTGGCCTTGTAGCCGGTGTTTCCTTCGCCACAGCAAGCCAAGTACCCGGCGGCACAACCGATGAAGGCAGTCCAGTATTAGAAGGCAAGCCTGCATTCGATGCCTTTGCCATTTCTTCGCTTATCGGACTTTGCTTCTCTGTTACTGGACTCATCATGTTCCTTTCAATTCTCACTTCTCGAAAACAAGCCAAAGATTTTCGTCGAGATTTGCCACTGAAACTTCTTCTTGGGTTAAGCTCTCTTTTTGTGTCCATTGCTTCATTGTTTGTTTCATTCTGCAGTGGACATTTTTTTCTGCTTAGCCATAATTTTAAGTCGATTTTGTTCCCAATTTACGCAACAACTTGTTTACCTGTGACTTTCTATGCCGTTGCACAATTCCCTCTATACTTTGATCTTGTAATGGCTATTTTAACCAAGGTTCCAACGGCAACTGATAAAGGTGACAATTTATAA
Protein sequence

>Msa0819680

MKTIADSENILPNIDSPEEVNDFISEYTLEGKWENVKLLYEKFPEQAHKALISESAGTALHVAIDLDEEDVVNELVNAILTHNNFEALEMVNEHGDTPLHFAASRGFAKICKCIIGNNNQRIDLLSLKNKDGETPLFQAAINGRKQAFAYLAHISEDIVDLQDLVREDGDSILHTAIRAEYFDLAVIIVNQYDYLSTQLNKEGSTPLKVLATRPSAFKSASNLSWYKRILYHCILVEPLDPAKTIRSYLRKMEARPDSNKMKLPNNYTTLYDFFSIFGKMVTIHLDLKKNKEGPEDPSNDRSQSKLKKNEQDPEDPSNKIQKEEQNSEDPSNKTQKKEQEREKYHVGFLPKNYETFLEFVKSAYVHTLGLTGVELKDVKTAKKKHIWSSQLLKALMERPYAAFTGEGGQPTDREIDRDIYNIFDPNFKQGETDRFDEQEQKHKESEIKEATSTPNKTMMETKPEYEKEEVDKKETPFLVAAKNGIVELVNEILDKIPSAIHDTNSKKENVLLVAVKSRQPLIVETLKTRMIKDSKDELWNNLVLAMDKEENTILHLAAEALGEGKPWQIAGSALQMMWDIKWFQYIKSLVPQHFYFRTNKEGKISSEIFKKSHEDLIKDSSDWLKDTSESCSVVSGLVAGVSFATASQVPGGTTDEGSPVLEGKPAFDAFAISSLIGLCFSVTGLIMFLSILTSRKQAKDFRRDLPLKLLLGLSSLFVSIASLFVSFCSGHFFLLSHNFKSILFPIYATTCLPVTFYAVAQFPLYFDLVMAILTKVPTATDKGDNL*