Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739810 | XP_003616997.1 | 98.695 | 766 | 10 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739810 | sp|Q9LVE4|CSCL4_ARATH | 75.603 | 746 | 179 | 2 | 1 | 743 | 1 | 746 | 0.0 | 1146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739810 | G7KCP6 | 98.695 | 766 | 10 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1568 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0739810 | Msa0758030 | 0.822695 | 2.064658e-53 | -8.615850e-47 |
| Msa0739810 | Msa0820140 | 0.970624 | 6.685126e-132 | -8.615850e-47 |
| Msa0739810 | Msa0860620 | 0.862265 | 5.729568e-64 | -8.615850e-47 |
| Msa0276860 | Msa0739810 | 0.804607 | 1.992180e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739810 | MtrunA17_Chr5g0439871 | 98.695 | 766 | 10 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1568 |
| Msa0739810 | MtrunA17_Chr7g0259591 | 65.354 | 762 | 259 | 2 | 1 | 759 | 1 | 760 | 0.0 | 1048 |
| Msa0739810 | MtrunA17_Chr5g0409801 | 62.204 | 717 | 269 | 1 | 1 | 715 | 1 | 717 | 0.0 | 951 |
| Msa0739810 | MtrunA17_Chr4g0075301 | 72.308 | 520 | 140 | 2 | 1 | 517 | 1 | 519 | 0.0 | 778 |
| Msa0739810 | MtrunA17_Chr6g0453641 | 32.436 | 706 | 447 | 11 | 10 | 711 | 9 | 688 | 1.03e-137 | 423 |
| Msa0739810 | MtrunA17_Chr7g0217981 | 31.680 | 726 | 447 | 11 | 12 | 711 | 11 | 713 | 2.23e-128 | 400 |
| Msa0739810 | MtrunA17_Chr4g0042751 | 31.417 | 713 | 453 | 13 | 10 | 715 | 9 | 692 | 3.82e-122 | 382 |
| Msa0739810 | MtrunA17_Chr1g0152031 | 30.282 | 710 | 454 | 10 | 10 | 712 | 9 | 684 | 1.90e-117 | 372 |
| Msa0739810 | MtrunA17_Chr2g0285541 | 31.302 | 722 | 461 | 13 | 19 | 726 | 18 | 718 | 6.19e-114 | 361 |
| Msa0739810 | MtrunA17_Chr4g0075291 | 69.737 | 228 | 66 | 1 | 531 | 755 | 2 | 229 | 6.83e-112 | 339 |
| Msa0739810 | MtrunA17_Chr5g0418061 | 30.265 | 717 | 461 | 13 | 2 | 711 | 5 | 689 | 6.80e-104 | 334 |
| Msa0739810 | MtrunA17_Chr3g0084121 | 34.236 | 406 | 249 | 5 | 300 | 702 | 2 | 392 | 8.38e-72 | 241 |
| Msa0739810 | MtrunA17_Chr3g0135281 | 45.361 | 97 | 51 | 2 | 318 | 413 | 59 | 154 | 4.29e-20 | 87.8 |
| Msa0739810 | MtrunA17_Chr4g0037231 | 86.000 | 50 | 7 | 0 | 106 | 155 | 88 | 137 | 7.37e-20 | 88.6 |
| Msa0739810 | MtrunA17_Chr3g0084131 | 30.000 | 150 | 101 | 3 | 113 | 260 | 57 | 204 | 1.36e-19 | 88.2 |
| Msa0739810 | MtrunA17_Chr3g0135291 | 35.294 | 187 | 112 | 4 | 421 | 605 | 5 | 184 | 1.53e-19 | 87.8 |
| Msa0739810 | MtrunA17_Chr8g0371331 | 21.605 | 648 | 376 | 22 | 86 | 617 | 75 | 706 | 6.16e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739810 | AT3G21620.1 | 75.603 | 746 | 179 | 2 | 1 | 743 | 1 | 746 | 0.0 | 1146 |
| Msa0739810 | AT1G11960.1 | 74.274 | 758 | 186 | 3 | 1 | 749 | 1 | 758 | 0.0 | 1145 |
| Msa0739810 | AT1G11960.3 | 74.274 | 758 | 186 | 3 | 1 | 749 | 1 | 758 | 0.0 | 1145 |
| Msa0739810 | AT4G22120.2 | 72.955 | 758 | 200 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1135 |
| Msa0739810 | AT4G22120.4 | 72.955 | 758 | 200 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1135 |
| Msa0739810 | AT4G22120.5 | 72.955 | 758 | 200 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1135 |
| Msa0739810 | AT4G22120.1 | 72.955 | 758 | 200 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1135 |
| Msa0739810 | AT4G22120.6 | 72.955 | 758 | 200 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1135 |
| Msa0739810 | AT4G22120.3 | 72.955 | 758 | 200 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1135 |
| Msa0739810 | AT4G15430.2 | 72.583 | 755 | 204 | 1 | 1 | 752 | 1 | 755 | 0.0 | 1131 |
| Msa0739810 | AT4G04340.2 | 72.895 | 760 | 201 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1128 |
| Msa0739810 | AT4G04340.1 | 72.895 | 760 | 201 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1128 |
| Msa0739810 | AT4G04340.3 | 72.895 | 760 | 201 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1128 |
| Msa0739810 | AT4G15430.1 | 72.487 | 756 | 204 | 2 | 1 | 752 | 1 | 756 | 0.0 | 1126 |
| Msa0739810 | AT1G62320.3 | 71.595 | 771 | 214 | 3 | 1 | 766 | 1 | 771 | 0.0 | 1111 |
| Msa0739810 | AT1G62320.5 | 71.595 | 771 | 214 | 3 | 1 | 766 | 1 | 771 | 0.0 | 1111 |
| Msa0739810 | AT1G62320.4 | 71.466 | 771 | 213 | 4 | 1 | 766 | 1 | 769 | 0.0 | 1107 |
| Msa0739810 | AT1G62320.1 | 70.558 | 771 | 213 | 5 | 1 | 766 | 1 | 762 | 0.0 | 1086 |
| Msa0739810 | AT4G02900.4 | 65.344 | 756 | 259 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1030 |
| Msa0739810 | AT4G02900.3 | 65.344 | 756 | 259 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1030 |
| Msa0739810 | AT4G02900.1 | 65.344 | 756 | 259 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1028 |
| Msa0739810 | AT1G11960.2 | 75.822 | 608 | 144 | 1 | 1 | 605 | 1 | 608 | 0.0 | 945 |
| Msa0739810 | AT1G32090.1 | 61.872 | 716 | 270 | 2 | 1 | 713 | 1 | 716 | 0.0 | 911 |
| Msa0739810 | AT1G62320.2 | 74.507 | 608 | 152 | 1 | 1 | 605 | 1 | 608 | 0.0 | 909 |
| Msa0739810 | AT4G02900.2 | 64.706 | 595 | 208 | 2 | 161 | 755 | 1 | 593 | 0.0 | 813 |
| Msa0739810 | AT3G01100.1 | 32.542 | 716 | 451 | 10 | 10 | 719 | 9 | 698 | 9.26e-135 | 415 |
| Msa0739810 | AT3G01100.4 | 32.542 | 716 | 451 | 10 | 10 | 719 | 55 | 744 | 3.50e-134 | 415 |
| Msa0739810 | AT3G01100.3 | 34.983 | 586 | 359 | 7 | 139 | 719 | 15 | 583 | 5.75e-122 | 378 |
| Msa0739810 | AT1G69450.2 | 30.274 | 730 | 472 | 13 | 4 | 725 | 3 | 703 | 1.80e-121 | 381 |
| Msa0739810 | AT1G69450.1 | 30.274 | 730 | 472 | 13 | 4 | 725 | 3 | 703 | 1.80e-121 | 381 |
| Msa0739810 | AT1G69450.3 | 29.194 | 757 | 472 | 14 | 4 | 725 | 3 | 730 | 5.90e-116 | 367 |
| Msa0739810 | AT1G58520.4 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 6.01e-113 | 360 |
| Msa0739810 | AT1G58520.1 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 6.01e-113 | 360 |
| Msa0739810 | AT1G58520.7 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 6.01e-113 | 360 |
| Msa0739810 | AT1G58520.6 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 6.01e-113 | 360 |
| Msa0739810 | AT1G58520.2 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 6.01e-113 | 360 |
| Msa0739810 | AT3G01100.2 | 32.387 | 599 | 379 | 8 | 10 | 605 | 9 | 584 | 9.13e-109 | 344 |
| Msa0739810 | AT3G54510.2 | 30.813 | 701 | 452 | 10 | 10 | 707 | 9 | 679 | 2.19e-105 | 339 |
| Msa0739810 | AT1G10090.1 | 29.328 | 699 | 461 | 7 | 10 | 701 | 9 | 681 | 1.76e-102 | 332 |
| Msa0739810 | AT1G30360.1 | 31.903 | 699 | 431 | 11 | 5 | 684 | 4 | 676 | 2.65e-102 | 331 |
| Msa0739810 | AT1G58520.5 | 31.208 | 596 | 395 | 6 | 139 | 731 | 10 | 593 | 2.30e-95 | 310 |
| Msa0739810 | AT3G54510.4 | 31.240 | 605 | 389 | 9 | 106 | 707 | 4 | 584 | 3.99e-91 | 298 |
| Msa0739810 | AT3G54510.1 | 31.240 | 605 | 389 | 9 | 106 | 707 | 4 | 584 | 3.99e-91 | 298 |
| Msa0739810 | AT3G54510.3 | 31.553 | 599 | 380 | 9 | 10 | 605 | 9 | 580 | 8.24e-88 | 288 |
| Msa0739810 | AT3G54510.5 | 32.207 | 503 | 317 | 8 | 106 | 605 | 4 | 485 | 7.60e-74 | 248 |
| Msa0739810 | AT3G54510.6 | 31.214 | 519 | 331 | 8 | 192 | 707 | 5 | 500 | 1.98e-73 | 249 |
| Msa0739810 | AT4G35870.1 | 21.839 | 435 | 289 | 8 | 86 | 474 | 92 | 521 | 4.66e-13 | 73.6 |
Find 181 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTTCATTAATGTGTTTC+TGG | 0.046711 | 5_1:+58368056 | Msa0739810:CDS |
| CACTCTCATTATCACAATTT+TGG | 0.102507 | 5_1:+58363031 | Msa0739810:five_prime_UTR |
| TTCTCAGAAATTCACAATTT+TGG | 0.122166 | 5_1:+58363114 | Msa0739810:five_prime_UTR |
| TATGAAAAGCAAGAAAATTT+TGG | 0.136309 | 5_1:+58369654 | Msa0739810:three_prime_UTR |
| GCTGCTGGCATTATAGATTT+AGG | 0.215346 | 5_1:-58366889 | None:intergenic |
| TGTCTCACAACTTCTGTTAA+TGG | 0.225729 | 5_1:+58368896 | Msa0739810:CDS |
| TACTGCAATTGCATTCTTAC+TGG | 0.251039 | 5_1:+58363877 | Msa0739810:CDS |
| CTCCAGCACTCTCATATTCT+TGG | 0.254312 | 5_1:-58368830 | None:intergenic |
| TTTATACAAGGTTTCCTTCC+TGG | 0.259327 | 5_1:+58367913 | Msa0739810:CDS |
| TGATGTTAAACAGGGTAATA+TGG | 0.269521 | 5_1:+58369724 | Msa0739810:three_prime_UTR |
| TGAAACCATATTGTCAAAAC+TGG | 0.272330 | 5_1:-58368972 | None:intergenic |
| CAGAGCCCCGTGACATATAC+TGG | 0.276735 | 5_1:+58367004 | Msa0739810:CDS |
| ATCGAAACACCAATTGTCTT+TGG | 0.283868 | 5_1:-58368276 | None:intergenic |
| CTGTTATGGTCCCTGTCAAT+TGG | 0.290711 | 5_1:+58364962 | Msa0739810:CDS |
| AAATACACCCTATCGTTTAT+AGG | 0.291133 | 5_1:-58363923 | None:intergenic |
| ATCCATAAGGCCAACTAAAA+AGG | 0.297259 | 5_1:+58366293 | Msa0739810:CDS |
| GTCTCACAACTTCTGTTAAT+GGG | 0.315219 | 5_1:+58368897 | Msa0739810:CDS |
| ATAACATTACATTTCAATAA+TGG | 0.324210 | 5_1:-58367184 | None:intergenic |
| ATGAGTGTTTGATGTTAAAC+AGG | 0.328197 | 5_1:+58369715 | Msa0739810:three_prime_UTR |
| ATGAAGAAAGTTGCTTTCAT+TGG | 0.328257 | 5_1:-58368300 | None:intergenic |
| GCAATGGATCCTGGGACTAT+TGG | 0.330247 | 5_1:+58368444 | Msa0739810:CDS |
| AAATCTTTCAAATTGAAGTT+TGG | 0.330467 | 5_1:-58369262 | None:intergenic |
| TCTATATACAAAAGAAAATC+TGG | 0.344704 | 5_1:-58369631 | None:intergenic |
| CAGTTCATTAATGTGTTTCT+GGG | 0.345844 | 5_1:+58368057 | Msa0739810:CDS |
| TGTTTCCTTCAAAACTCGTT+GGG | 0.348255 | 5_1:+58366915 | Msa0739810:CDS |
| TATAGGTTGAATCCGGAGTA+TGG | 0.351640 | 5_1:-58363906 | None:intergenic |
| TTATACAAGGTTTCCTTCCT+GGG | 0.352560 | 5_1:+58367914 | Msa0739810:CDS |
| GATAGATAAGAGCAATATTC+AGG | 0.361720 | 5_1:+58369682 | Msa0739810:three_prime_UTR |
| TCAATAAGGAGACTTGTAAT+TGG | 0.363088 | 5_1:+58367057 | Msa0739810:CDS |
| CCTGCATGTTCGATTAGTTC+AGG | 0.364323 | 5_1:-58364082 | None:intergenic |
| CATACATAAGGTTCTTAAAC+TGG | 0.365960 | 5_1:+58364032 | Msa0739810:CDS |
| TTTCTTCATAACATACATAA+TGG | 0.366062 | 5_1:+58368314 | Msa0739810:CDS |
| ATGGCTTCACTTGGTGATAT+AGG | 0.369854 | 5_1:+58363830 | Msa0739810:CDS |
| CATTTGTGCAGGTACTTGTT+AGG | 0.372092 | 5_1:+58365678 | Msa0739810:intron |
| ATGAGAGTGCTGGAGCATTC+TGG | 0.373825 | 5_1:+58368838 | Msa0739810:CDS |
| AACCACATTTGAACGTTTCA+AGG | 0.375878 | 5_1:-58364995 | None:intergenic |
| AGAAAATGCTAGGAGTGAAA+TGG | 0.384869 | 5_1:-58364941 | None:intergenic |
| AAACTAGAAATCCAACAATA+TGG | 0.385358 | 5_1:+58366965 | Msa0739810:CDS |
| TCACTTAAAGAATTTCTTGT+TGG | 0.388253 | 5_1:+58368395 | Msa0739810:CDS |
| GAATGAATTTATCTAATTGT+TGG | 0.390867 | 5_1:-58368104 | None:intergenic |
| CAGTATATGTCACGGGGCTC+TGG | 0.392278 | 5_1:-58367003 | None:intergenic |
| CATATGTTTCTCTCTCAATA+AGG | 0.392484 | 5_1:+58367043 | Msa0739810:CDS |
| TGTTCGATTAGTTCAGGTTC+CGG | 0.397156 | 5_1:-58364076 | None:intergenic |
| CAACAATATGGTTGACTGAA+TGG | 0.398254 | 5_1:+58366977 | Msa0739810:CDS |
| TTGACTTCAACTCAAATCTA+AGG | 0.398336 | 5_1:-58369494 | None:intergenic |
| GGGACTATTGGTTTCAATAC+AGG | 0.399816 | 5_1:+58368456 | Msa0739810:CDS |
| ACTTATAAACCCTTCGAACT+TGG | 0.400798 | 5_1:-58367989 | None:intergenic |
| CGTGAAGAAGCAATGGATCC+TGG | 0.400945 | 5_1:+58368435 | Msa0739810:CDS |
| CATTCAGTCAACCATATTGT+TGG | 0.403385 | 5_1:-58366976 | None:intergenic |
| GTTTATAAGTCAGTCTTCTC+TGG | 0.406786 | 5_1:+58368002 | Msa0739810:CDS |
| GAAAATGCTAGGAGTGAAAT+GGG | 0.410463 | 5_1:-58364940 | None:intergenic |
| CCAGAAACACATTAATGAAC+TGG | 0.416762 | 5_1:-58368056 | None:intergenic |
| TGAACGTTTCAAGGTGTCAT+TGG | 0.416852 | 5_1:-58364986 | None:intergenic |
| ATACAACTTTATTTCTTGCT+TGG | 0.417063 | 5_1:+58368489 | Msa0739810:CDS |
| CAGGATCCATTGCTTCTTCA+CGG | 0.418998 | 5_1:-58368434 | None:intergenic |
| CAGTCACTTGCTAATATAGA+AGG | 0.422929 | 5_1:+58367132 | Msa0739810:CDS |
| AATTTGTCAATATAGACTTC+AGG | 0.427589 | 5_1:+58364008 | Msa0739810:CDS |
| GTCTCCGTCATCTTTGAAAA+CGG | 0.427813 | 5_1:-58369308 | None:intergenic |
| GATGGATGGGCAGGATGTGC+TGG | 0.429016 | 5_1:+58368339 | Msa0739810:CDS |
| ATATTCCACTTGGATCAAAT+AGG | 0.437664 | 5_1:+58365049 | Msa0739810:CDS |
| GACATGATCATCAATATTGT+TGG | 0.439726 | 5_1:-58367967 | None:intergenic |
| AACAATATGGTTGACTGAAT+GGG | 0.447238 | 5_1:+58366978 | Msa0739810:CDS |
| AACTTGATCATACCGTGAAT+TGG | 0.448801 | 5_1:-58365525 | None:intergenic |
| GGACATGCTATATCTTGAAA+AGG | 0.449434 | 5_1:+58365440 | Msa0739810:CDS |
| ATAACATACATAATGGTTGA+TGG | 0.452299 | 5_1:+58368321 | Msa0739810:CDS |
| GTGTCATTGGTCCAATTGAC+AGG | 0.457964 | 5_1:-58364973 | None:intergenic |
| TGATCAATATCTAACTCATC+AGG | 0.460224 | 5_1:+58365769 | Msa0739810:CDS |
| CAGGTGTGTTCTTCCGCGAC+TGG | 0.464122 | 5_1:-58369393 | None:intergenic |
| AAACCCCTCAGATACCATTT+CGG | 0.465318 | 5_1:-58363947 | None:intergenic |
| TTTCTGGGGAGCATAATTAC+CGG | 0.466924 | 5_1:+58368072 | Msa0739810:CDS |
| TGCAGAATTCCAAAGACAAT+TGG | 0.469700 | 5_1:+58368267 | Msa0739810:intron |
| TCTCCGTCATCTTTGAAAAC+GGG | 0.472289 | 5_1:-58369307 | None:intergenic |
| TCCGGCATTTGCAATGCAGC+AGG | 0.472371 | 5_1:-58364058 | None:intergenic |
| ATATCTTGTCTACCGTCATC+AGG | 0.473416 | 5_1:+58368575 | Msa0739810:CDS |
| ATGATGTATGGAAGTAGAAA+TGG | 0.475585 | 5_1:-58368534 | None:intergenic |
| CTGACTGATTCATCAGCATC+AGG | 0.478193 | 5_1:-58365710 | None:intergenic |
| TGCCCCTCCTTGCAATGGAC+TGG | 0.482980 | 5_1:-58363975 | None:intergenic |
| TTGTTTCCTTCAAAACTCGT+TGG | 0.486952 | 5_1:+58366914 | Msa0739810:CDS |
| TACTGGCATTTGCCATACTC+CGG | 0.495772 | 5_1:+58363894 | Msa0739810:CDS |
| AAACAGGGTAATATGGCATA+AGG | 0.496095 | 5_1:+58369731 | Msa0739810:three_prime_UTR |
| TGTTAGTTCAACGCTCAAGC+AGG | 0.497157 | 5_1:-58362992 | None:intergenic |
| TATCGTTTATAGGTTGAATC+CGG | 0.497991 | 5_1:-58363913 | None:intergenic |
| ACAATACGTCCATGGACATC+AGG | 0.498283 | 5_1:-58368861 | None:intergenic |
| ATTCTAGAAACGAATCCATA+AGG | 0.498469 | 5_1:+58366280 | Msa0739810:CDS |
| AATGGTATCTGAGGGGTTTG+AGG | 0.499986 | 5_1:+58363951 | Msa0739810:CDS |
| CGTTAAATTTCAGATAGAGC+TGG | 0.503238 | 5_1:+58366843 | Msa0739810:intron |
| TGGATTCTGCTGCATACTTG+AGG | 0.507008 | 5_1:+58364107 | Msa0739810:CDS |
| TAATTGTTGGAATGCAGTCC+CGG | 0.510445 | 5_1:-58368091 | None:intergenic |
| ACTAATCGAACATGCAGGCT+TGG | 0.510730 | 5_1:+58364087 | Msa0739810:CDS |
| CTTAATGACTAGTGCATGGT+TGG | 0.510956 | 5_1:+58369537 | Msa0739810:three_prime_UTR |
| CATACATAATGGTTGATGGA+TGG | 0.514476 | 5_1:+58368325 | Msa0739810:CDS |
| GACATGCTATATCTTGAAAA+GGG | 0.520309 | 5_1:+58365441 | Msa0739810:CDS |
| GATCATACCGTGAATTGGTC+AGG | 0.520969 | 5_1:-58365520 | None:intergenic |
| TAGACTTCAGGTCATACATA+AGG | 0.521133 | 5_1:+58364020 | Msa0739810:CDS |
| TTTAAGTGATAAAATATCAA+AGG | 0.523335 | 5_1:-58368381 | None:intergenic |
| TTGAAGGAAACAAAGGCTGC+TGG | 0.523880 | 5_1:-58366904 | None:intergenic |
| TGATGAGTTAGATATTGATC+AGG | 0.525466 | 5_1:-58365767 | None:intergenic |
| ACATTTCAATAATGGACTTG+AGG | 0.530070 | 5_1:-58367176 | None:intergenic |
| AGTGACTGTACGAATGCAAT+GGG | 0.531271 | 5_1:-58367117 | None:intergenic |
| TAAATCTATAGACAGATTGA+AGG | 0.531434 | 5_1:+58369567 | Msa0739810:three_prime_UTR |
| GCCTGCTGCATTGCAAATGC+CGG | 0.532910 | 5_1:+58364057 | Msa0739810:CDS |
| ATGATCATGTCCAAGTTCGA+AGG | 0.533063 | 5_1:+58367979 | Msa0739810:CDS |
| TCAATTTCAAATATTCCACT+TGG | 0.533872 | 5_1:+58365039 | Msa0739810:CDS |
| AACCAAGAATATGAGAGTGC+TGG | 0.536287 | 5_1:+58368828 | Msa0739810:CDS |
| TACTTGAGGATCTACTTACT+CGG | 0.536863 | 5_1:+58364121 | Msa0739810:CDS |
| CACCTTGAAACGTTCAAATG+TGG | 0.537370 | 5_1:+58364993 | Msa0739810:CDS |
| CTTATTGAGAGAGAAACATA+TGG | 0.537706 | 5_1:-58367042 | None:intergenic |
| AGGTCTTTGTGGCAGTAAAG+TGG | 0.540543 | 5_1:+58366463 | Msa0739810:CDS |
| TCAAAGAACATGGCTTCACT+TGG | 0.543056 | 5_1:+58363821 | Msa0739810:exon |
| TCTATAGACAGATTGAAGGT+TGG | 0.543525 | 5_1:+58369571 | Msa0739810:three_prime_UTR |
| CCACTATGTTTGCTAGGCGC+AGG | 0.545840 | 5_1:-58369412 | None:intergenic |
| TCAAGAGTGGAAGGAAGAGC+CGG | 0.545999 | 5_1:+58369351 | Msa0739810:CDS |
| GATAGAGCTGGAGAAAGATA+AGG | 0.546330 | 5_1:+58366855 | Msa0739810:intron |
| GTTATCCCAGTATATGTCAC+GGG | 0.546554 | 5_1:-58367010 | None:intergenic |
| CGGGATGGATATATGCATCA+TGG | 0.546871 | 5_1:-58369288 | None:intergenic |
| AAGAAATAAAGTTGTATCTG+AGG | 0.548593 | 5_1:-58368483 | None:intergenic |
| ACAAATGCCCCTCCTTGCAA+TGG | 0.549030 | 5_1:-58363980 | None:intergenic |
| ATACATAATGGTTGATGGAT+GGG | 0.551192 | 5_1:+58368326 | Msa0739810:CDS |
| ACGCCGTCCTGACCAATTCA+CGG | 0.551285 | 5_1:+58365513 | Msa0739810:CDS |
| GGTCCAGTCCATTGCAAGGA+GGG | 0.552606 | 5_1:+58363972 | Msa0739810:CDS |
| GGATTCAACCTATAAACGAT+AGG | 0.553075 | 5_1:+58363915 | Msa0739810:CDS |
| ACTGGGAGAGCGATGAGTAA+TGG | 0.553292 | 5_1:-58368954 | None:intergenic |
| GTGAAGAAGCAATGGATCCT+GGG | 0.559253 | 5_1:+58368436 | Msa0739810:CDS |
| TCCAAACAAAACGCCAGTCG+CGG | 0.560248 | 5_1:+58369380 | Msa0739810:CDS |
| GCATTCTGGCCTGATGTCCA+TGG | 0.563003 | 5_1:+58368852 | Msa0739810:CDS |
| GAGCCACCACTATGTTTGCT+AGG | 0.566786 | 5_1:-58369418 | None:intergenic |
| TCAATAATGGACTTGAGGAA+TGG | 0.570509 | 5_1:-58367171 | None:intergenic |
| GTAAGAATGCAATTGCAGTA+AGG | 0.570711 | 5_1:-58363874 | None:intergenic |
| GTCAAGGACTAAGTTCGTGT+TGG | 0.570794 | 5_1:+58369512 | Msa0739810:three_prime_UTR |
| GTTAGTTCAACGCTCAAGCA+GGG | 0.572095 | 5_1:-58362991 | None:intergenic |
| ATAATGGTTGATGGATGGGC+AGG | 0.572967 | 5_1:+58368330 | Msa0739810:CDS |
| TTCTGGGGAGCATAATTACC+GGG | 0.577184 | 5_1:+58368073 | Msa0739810:CDS |
| TGTGATGAGTCAAGAGTGGA+AGG | 0.578062 | 5_1:+58369342 | Msa0739810:CDS |
| TTAGATTTGAGTTGAAGTCA+AGG | 0.578851 | 5_1:+58369496 | Msa0739810:three_prime_UTR |
| AAGTGACTGTACGAATGCAA+TGG | 0.582913 | 5_1:-58367118 | None:intergenic |
| ATCAGTAGTGCCATGCATAG+AGG | 0.583391 | 5_1:-58369449 | None:intergenic |
| GTCCAGTCCATTGCAAGGAG+GGG | 0.583896 | 5_1:+58363973 | Msa0739810:CDS |
| GATTCAACCTATAAACGATA+GGG | 0.584151 | 5_1:+58363916 | Msa0739810:CDS |
| AATGGATGAGTAGTAAAAGC+AGG | 0.586318 | 5_1:-58369020 | None:intergenic |
| GTTTCCTTCAAAACTCGTTG+GGG | 0.588764 | 5_1:+58366916 | Msa0739810:CDS |
| AGTTCATTAATGTGTTTCTG+GGG | 0.590166 | 5_1:+58368058 | Msa0739810:CDS |
| AATAGCTTCAAAGCAATCCC+AGG | 0.590192 | 5_1:-58367931 | None:intergenic |
| TGATCATGTCCAAGTTCGAA+GGG | 0.591481 | 5_1:+58367980 | Msa0739810:CDS |
| GGACCATAACAGAAAATGCT+AGG | 0.593519 | 5_1:-58364951 | None:intergenic |
| AAAAGACCGTGAAGAAGCAA+TGG | 0.595265 | 5_1:+58368428 | Msa0739810:CDS |
| CTGGAAGATGTAATATCTTG+AGG | 0.595341 | 5_1:-58368037 | None:intergenic |
| ATGCAAATACAATACGTCCA+TGG | 0.598039 | 5_1:-58368869 | None:intergenic |
| CGTCATCTTTGAAAACGGGA+TGG | 0.599840 | 5_1:-58369303 | None:intergenic |
| CAAGATATAGCATGTCCAGA+AGG | 0.603409 | 5_1:-58365434 | None:intergenic |
| AGCAATGGTCAAAGACACAT+TGG | 0.604396 | 5_1:+58369225 | Msa0739810:CDS |
| TCATTACAAGCCTCTATGCA+TGG | 0.608855 | 5_1:+58369439 | Msa0739810:CDS |
| TTGAGGTCCAGTCCATTGCA+AGG | 0.608896 | 5_1:+58363968 | Msa0739810:CDS |
| TGATAGTAAATCAAAGAACA+TGG | 0.609951 | 5_1:+58363811 | Msa0739810:exon |
| GCGTGAACTTCAGGAAGCAA+TGG | 0.614185 | 5_1:+58369210 | Msa0739810:intron |
| TGACATATACTGGGATAACA+TGG | 0.614941 | 5_1:+58367014 | Msa0739810:CDS |
| TGTTATCCCAGTATATGTCA+CGG | 0.616689 | 5_1:-58367011 | None:intergenic |
| GTATTGAAACCAATAGTCCC+AGG | 0.617054 | 5_1:-58368453 | None:intergenic |
| ACTTGAGGATCTACTTACTC+GGG | 0.622654 | 5_1:+58364122 | Msa0739810:CDS |
| ACGTACCTATTTGATCCAAG+TGG | 0.632709 | 5_1:-58365054 | None:intergenic |
| GAAACCATATTGTCAAAACT+GGG | 0.637941 | 5_1:-58368971 | None:intergenic |
| CCTGAACTAATCGAACATGC+AGG | 0.641145 | 5_1:+58364082 | Msa0739810:CDS |
| GCTTCAAAGCAATCCCAGGA+AGG | 0.641603 | 5_1:-58367927 | None:intergenic |
| TGAGTGTTTGATGTTAAACA+GGG | 0.643301 | 5_1:+58369716 | Msa0739810:three_prime_UTR |
| AGCTAATGTTTACCTGATGA+CGG | 0.643360 | 5_1:-58368587 | None:intergenic |
| GAGTTAGATATTGATCAGGA+TGG | 0.644477 | 5_1:-58365763 | None:intergenic |
| AGAGCCCCGTGACATATACT+GGG | 0.645760 | 5_1:+58367005 | Msa0739810:CDS |
| AGGTCCAGTCCATTGCAAGG+AGG | 0.654492 | 5_1:+58363971 | Msa0739810:CDS |
| CCTGCGCCTAGCAAACATAG+TGG | 0.655457 | 5_1:+58369412 | Msa0739810:CDS |
| GCGCCTAGCAAACATAGTGG+TGG | 0.658614 | 5_1:+58369415 | Msa0739810:CDS |
| GTGATGTGATGAGTCAAGAG+TGG | 0.660535 | 5_1:+58369338 | Msa0739810:CDS |
| GGAGCTTAATGACTAGTGCA+TGG | 0.668855 | 5_1:+58369533 | Msa0739810:three_prime_UTR |
| TTAGTTCAACGCTCAAGCAG+GGG | 0.670183 | 5_1:-58362990 | None:intergenic |
| AATGGACTTGAGGAATGGTG+CGG | 0.681567 | 5_1:-58367166 | None:intergenic |
| TGTCATTGGTCCAATTGACA+GGG | 0.681640 | 5_1:-58364972 | None:intergenic |
| TTTCCGAAATGGTATCTGAG+GGG | 0.685701 | 5_1:+58363944 | Msa0739810:CDS |
| GTGTGACTACAGCATACACA+AGG | 0.702184 | 5_1:-58368512 | None:intergenic |
| ATACCGTGAATTGGTCAGGA+CGG | 0.704095 | 5_1:-58365516 | None:intergenic |
| TTATCCCAGTATATGTCACG+GGG | 0.723719 | 5_1:-58367009 | None:intergenic |
| AAAATGCTAGGAGTGAAATG+GGG | 0.730707 | 5_1:-58364939 | None:intergenic |
| ACTGATTCATCAGCATCAGG+CGG | 0.734704 | 5_1:-58365707 | None:intergenic |
| GATGGATATATGCATCATGG+AGG | 0.742987 | 5_1:-58369285 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCAATTTTAGATTT+TGG | + | chr5_1:58363204-58363223 | Msa0739810:intron | 10.0% |
| !!! | TAAAATCCAATTTTTTTATT+TGG | - | chr5_1:58363262-58363281 | None:intergenic | 10.0% |
| !!! | ATCAATAGTTAATTTTTTTT+AGG | + | chr5_1:58364258-58364277 | Msa0739810:intron | 10.0% |
| !!! | TCAATAGTTAATTTTTTTTA+GGG | + | chr5_1:58364259-58364278 | Msa0739810:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTGTA+GGG | - | chr5_1:58364362-58364381 | None:intergenic | 10.0% |
| !!! | TATAAGTAAATTTTTTTTGT+AGG | - | chr5_1:58364363-58364382 | None:intergenic | 10.0% |
| !! | TATCAACTATTATAAAAAAA+GGG | - | chr5_1:58364819-58364838 | None:intergenic | 10.0% |
| !! | ATATCAACTATTATAAAAAA+AGG | - | chr5_1:58364820-58364839 | None:intergenic | 10.0% |
| !! | TATTATGAAAATCTTAATAA+AGG | + | chr5_1:58366602-58366621 | Msa0739810:intron | 10.0% |
| !! | ATTATGAAAATCTTAATAAA+GGG | + | chr5_1:58366603-58366622 | Msa0739810:intron | 10.0% |
| !! | TAATATAATATGATATTGTA+TGG | + | chr5_1:58367686-58367705 | Msa0739810:intron | 10.0% |
| !! | GTAAAACCAAATAAAAAAAT+TGG | + | chr5_1:58363253-58363272 | Msa0739810:intron | 15.0% |
| !! | AAAATAAATGTCATGAAATT+TGG | + | chr5_1:58363323-58363342 | Msa0739810:intron | 15.0% |
| !! | AAAAAAAAAAACTAGTAAAG+TGG | - | chr5_1:58363608-58363627 | None:intergenic | 15.0% |
| !! | ATACATAATAAATCATGTAT+TGG | - | chr5_1:58364227-58364246 | None:intergenic | 15.0% |
| !! | AAACCTATTAAAATTAAGTA+AGG | - | chr5_1:58364333-58364352 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr5_1:58364654-58364673 | None:intergenic | 15.0% |
| !! | AAACAAATTTGAATTTAGTA+AGG | + | chr5_1:58364684-58364703 | Msa0739810:intron | 15.0% |
| !! | AGAACTATTAAAATTAAGTA+AGG | + | chr5_1:58364745-58364764 | Msa0739810:intron | 15.0% |
| !! | CTTATTCATTTAAATAAACA+AGG | - | chr5_1:58365181-58365200 | None:intergenic | 15.0% |
| !! | ATAAATCTTTATCATAGAAA+CGG | - | chr5_1:58365594-58365613 | None:intergenic | 15.0% |
| !!! | AATAGAATACCTTTAAAAAA+TGG | - | chr5_1:58366377-58366396 | None:intergenic | 15.0% |
| !! | ATTTAACTAAAAAACCAATT+TGG | - | chr5_1:58366748-58366767 | None:intergenic | 15.0% |
| !! | ATAACATTACATTTCAATAA+TGG | - | chr5_1:58367187-58367206 | None:intergenic | 15.0% |
| !! | AAAGAGAAAAATGTAATAAA+AGG | - | chr5_1:58367220-58367239 | None:intergenic | 15.0% |
| !!! | TATTACATTTTTCTCTTTAT+TGG | + | chr5_1:58367222-58367241 | Msa0739810:intron | 15.0% |
| !!! | CTGAATTTTCTATTTATTTA+AGG | - | chr5_1:58367576-58367595 | None:intergenic | 15.0% |
| !! | CTTAAATAAATAGAAAATTC+AGG | + | chr5_1:58367574-58367593 | Msa0739810:intron | 15.0% |
| !! | TTTAAGTGATAAAATATCAA+AGG | - | chr5_1:58368384-58368403 | None:intergenic | 15.0% |
| !! | TCAAAAAGTTGTAAACTTTA+TGG | - | chr5_1:58362929-58362948 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTTGTTCATCAT+TGG | + | chr5_1:58363278-58363297 | Msa0739810:intron | 20.0% |
| !!! | ATTGTGATTTTAGTTCATAA+AGG | + | chr5_1:58363379-58363398 | Msa0739810:intron | 20.0% |
| !!! | TTGTGATTTTAGTTCATAAA+GGG | + | chr5_1:58363380-58363399 | Msa0739810:intron | 20.0% |
| !! | GAAGAATTGTATGAAATATA+TGG | + | chr5_1:58363538-58363557 | Msa0739810:intron | 20.0% |
| !! | TCACTGTTTATATCATTTAT+TGG | + | chr5_1:58363723-58363742 | Msa0739810:intron | 20.0% |
| !! | TTGGAAGATTAGAAATTAAA+CGG | + | chr5_1:58363742-58363761 | Msa0739810:intron | 20.0% |
| !!! | TTTAGGGTTAAATATGTTTT+TGG | + | chr5_1:58364275-58364294 | Msa0739810:intron | 20.0% |
| !!! | AGTCCTTACTTAATTTTAAT+AGG | + | chr5_1:58364327-58364346 | Msa0739810:intron | 20.0% |
| !!! | TTTAAAACGACAAAAGTTAA+AGG | + | chr5_1:58364534-58364553 | Msa0739810:intron | 20.0% |
| !!! | AAAAGGGTTAAATATGTTTT+TGG | - | chr5_1:58364803-58364822 | None:intergenic | 20.0% |
| !! | AAAATATCACTTAAGAGTAA+GGG | - | chr5_1:58366170-58366189 | None:intergenic | 20.0% |
| !! | AAAAATATCACTTAAGAGTA+AGG | - | chr5_1:58366171-58366190 | None:intergenic | 20.0% |
| !! | TTATAGTAACTTGATACAAA+AGG | + | chr5_1:58367509-58367528 | Msa0739810:intron | 20.0% |
| !! | ATAATCTTACATTATCTCTT+AGG | - | chr5_1:58367636-58367655 | None:intergenic | 20.0% |
| !! | GAATGAATTTATCTAATTGT+TGG | - | chr5_1:58368107-58368126 | None:intergenic | 20.0% |
| !! | TTTCTTCATAACATACATAA+TGG | + | chr5_1:58368314-58368333 | Msa0739810:CDS | 20.0% |
| !! | GAAAAAAAAAATACCTGTAA+TGG | - | chr5_1:58369041-58369060 | None:intergenic | 20.0% |
| !!! | TAAACAGAAAGCAATATTTT+AGG | + | chr5_1:58369125-58369144 | Msa0739810:intron | 20.0% |
| !!! | AAACAGAAAGCAATATTTTA+GGG | + | chr5_1:58369126-58369145 | Msa0739810:intron | 20.0% |
| !!! | GAGTTAATTTTCTTTTTTTG+TGG | + | chr5_1:58369186-58369205 | Msa0739810:intron | 20.0% |
| !! | AAATCTTTCAAATTGAAGTT+TGG | - | chr5_1:58369265-58369284 | None:intergenic | 20.0% |
| !! | TCTATATACAAAAGAAAATC+TGG | - | chr5_1:58369634-58369653 | None:intergenic | 20.0% |
| !!! | TATGAAAAGCAAGAAAATTT+TGG | + | chr5_1:58369654-58369673 | Msa0739810:three_prime_UTR | 20.0% |
| !!! | ATGAAAAGCAAGAAAATTTT+GGG | + | chr5_1:58369655-58369674 | Msa0739810:three_prime_UTR | 20.0% |
| !! | TTCTCAGAAATTCACAATTT+TGG | + | chr5_1:58363114-58363133 | Msa0739810:five_prime_UTR | 25.0% |
| !!! | TTTTGAAGTGAGTTATTGTT+TGG | + | chr5_1:58363450-58363469 | Msa0739810:intron | 25.0% |
| ! | AGCTAGATTATTATGTGAAA+AGG | + | chr5_1:58363486-58363505 | Msa0739810:intron | 25.0% |
| ! | GCTAGATTATTATGTGAAAA+GGG | + | chr5_1:58363487-58363506 | Msa0739810:intron | 25.0% |
| ! | GAATTGTATGAAATATATGG+TGG | + | chr5_1:58363541-58363560 | Msa0739810:intron | 25.0% |
| ! | AAAAAAACTAGTAAAGTGGT+GGG | - | chr5_1:58363604-58363623 | None:intergenic | 25.0% |
| ! | AAAAAAAACTAGTAAAGTGG+TGG | - | chr5_1:58363605-58363624 | None:intergenic | 25.0% |
| ! | TGATAGTAAATCAAAGAACA+TGG | + | chr5_1:58363811-58363830 | Msa0739810:exon | 25.0% |
| ! | AATTTGTCAATATAGACTTC+AGG | + | chr5_1:58364008-58364027 | Msa0739810:CDS | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | + | chr5_1:58364291-58364310 | Msa0739810:intron | 25.0% |
| !! | TAGAAGTTCCCAATTTTATA+GGG | - | chr5_1:58364302-58364321 | None:intergenic | 25.0% |
| !! | TTAGAAGTTCCCAATTTTAT+AGG | - | chr5_1:58364303-58364322 | None:intergenic | 25.0% |
| !!! | AAACAAACTTTGTTTTAGCA+GGG | - | chr5_1:58364394-58364413 | None:intergenic | 25.0% |
| !!! | TAAACAAACTTTGTTTTAGC+AGG | - | chr5_1:58364395-58364414 | None:intergenic | 25.0% |
| ! | AAGGTAAAAGTAACAAAATC+TGG | + | chr5_1:58364553-58364572 | Msa0739810:intron | 25.0% |
| !!! | AATCTTGCGATAATTTTTTG+TGG | + | chr5_1:58364588-58364607 | Msa0739810:intron | 25.0% |
| !!! | TGAGTGCATAAATTTTTTGT+AGG | + | chr5_1:58364715-58364734 | Msa0739810:intron | 25.0% |
| !!! | GAGTGCATAAATTTTTTGTA+GGG | + | chr5_1:58364716-58364735 | Msa0739810:intron | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | - | chr5_1:58364291-58364310 | None:intergenic | 25.0% |
| ! | ATCTTATTCAATTGAATTGC+AGG | + | chr5_1:58364902-58364921 | Msa0739810:intron | 25.0% |
| ! | TCAATTTCAAATATTCCACT+TGG | + | chr5_1:58365039-58365058 | Msa0739810:CDS | 25.0% |
| !! | ATAGAATTGTTTAGAGTTAG+AGG | - | chr5_1:58365239-58365258 | None:intergenic | 25.0% |
| ! | AAACAAATTGATACATCTTC+TGG | + | chr5_1:58365280-58365299 | Msa0739810:intron | 25.0% |
| ! | GAAAAGCTTAACAGATATTT+CGG | - | chr5_1:58365336-58365355 | None:intergenic | 25.0% |
| !! | TCATTACTTATTGCAGATTT+TGG | + | chr5_1:58365383-58365402 | Msa0739810:intron | 25.0% |
| !! | TATGAATTTGAAGTCATAAC+AGG | - | chr5_1:58365919-58365938 | None:intergenic | 25.0% |
| ! | GAGAATTATATCTTGTTAAC+TGG | + | chr5_1:58366012-58366031 | Msa0739810:intron | 25.0% |
| ! | AGAAGAAGAAAAAACAGAAT+TGG | + | chr5_1:58366235-58366254 | Msa0739810:CDS | 25.0% |
| ! | TTAAAAAATGGCAACAGATT+TGG | - | chr5_1:58366365-58366384 | None:intergenic | 25.0% |
| !!! | AATCTGTTGCCATTTTTTAA+AGG | + | chr5_1:58366365-58366384 | Msa0739810:intron | 25.0% |
| ! | AAACTAGAAATCCAACAATA+TGG | + | chr5_1:58366965-58366984 | Msa0739810:CDS | 25.0% |
| ! | ATATTGTTGGCAAAAAAATG+AGG | - | chr5_1:58367957-58367976 | None:intergenic | 25.0% |
| ! | ACAGTCATATATATATGCAT+AGG | - | chr5_1:58368158-58368177 | None:intergenic | 25.0% |
| ! | ATTATGAACAAATCATGTAC+AGG | - | chr5_1:58368229-58368248 | None:intergenic | 25.0% |
| ! | ATAACATACATAATGGTTGA+TGG | + | chr5_1:58368321-58368340 | Msa0739810:CDS | 25.0% |
| ! | TCACTTAAAGAATTTCTTGT+TGG | + | chr5_1:58368395-58368414 | Msa0739810:CDS | 25.0% |
| ! | AAGAAATAAAGTTGTATCTG+AGG | - | chr5_1:58368486-58368505 | None:intergenic | 25.0% |
| !! | ATACAACTTTATTTCTTGCT+TGG | + | chr5_1:58368489-58368508 | Msa0739810:CDS | 25.0% |
| !!! | TCGATTTTAATATATGCTCA+TGG | - | chr5_1:58368733-58368752 | None:intergenic | 25.0% |
| !! | TTTTGACAATATGGTTTCAT+CGG | + | chr5_1:58368976-58368995 | Msa0739810:CDS | 25.0% |
| !!! | AACAGAAAGCAATATTTTAG+GGG | + | chr5_1:58369127-58369146 | Msa0739810:intron | 25.0% |
| ! | TAAATCTATAGACAGATTGA+AGG | + | chr5_1:58369567-58369586 | Msa0739810:three_prime_UTR | 25.0% |
| ! | CACTCTCATTATCACAATTT+TGG | + | chr5_1:58363031-58363050 | Msa0739810:five_prime_UTR | 30.0% |
| GAAACAGAAAAAGAAGAGAA+TGG | - | chr5_1:58363076-58363095 | None:intergenic | 30.0% | |
| GGTAATGTACTCTTATGTAA+TGG | + | chr5_1:58363147-58363166 | Msa0739810:intron | 30.0% | |
| !!! | GTTATGCATGTTTTTTTGTG+TGG | + | chr5_1:58363226-58363245 | Msa0739810:intron | 30.0% |
| ! | TTCATCATTGGTTGTTAAGA+TGG | + | chr5_1:58363290-58363309 | Msa0739810:intron | 30.0% |
| AAAAAACTAGTAAAGTGGTG+GGG | - | chr5_1:58363603-58363622 | None:intergenic | 30.0% | |
| ! | AATGGAGTTGTATATTTTGC+AGG | + | chr5_1:58363777-58363796 | Msa0739810:intron | 30.0% |
| ! | ATGGAGTTGTATATTTTGCA+GGG | + | chr5_1:58363778-58363797 | Msa0739810:intron | 30.0% |
| ! | TATCGTTTATAGGTTGAATC+CGG | - | chr5_1:58363916-58363935 | None:intergenic | 30.0% |
| GATTCAACCTATAAACGATA+GGG | + | chr5_1:58363916-58363935 | Msa0739810:CDS | 30.0% | |
| AAATACACCCTATCGTTTAT+AGG | - | chr5_1:58363926-58363945 | None:intergenic | 30.0% | |
| CATACATAAGGTTCTTAAAC+TGG | + | chr5_1:58364032-58364051 | Msa0739810:CDS | 30.0% | |
| !! | TAAAGTTTGCAGTTCTGAAT+CGG | + | chr5_1:58364171-58364190 | Msa0739810:intron | 30.0% |
| ATTGGTTAAAATCTACTCTC+TGG | - | chr5_1:58364209-58364228 | None:intergenic | 30.0% | |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | + | chr5_1:58364290-58364309 | Msa0739810:intron | 30.0% |
| ! | CATGTTTAGAACACTATGAA+AGG | + | chr5_1:58364457-58364476 | Msa0739810:intron | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | + | chr5_1:58364760-58364779 | Msa0739810:intron | 30.0% | |
| ! | TTAGAAGGTCCCAATTTTAT+AGG | + | chr5_1:58364775-58364794 | Msa0739810:intron | 30.0% |
| ! | TAGAAGGTCCCAATTTTATA+GGG | + | chr5_1:58364776-58364795 | Msa0739810:intron | 30.0% |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | - | chr5_1:58364290-58364309 | None:intergenic | 30.0% |
| TCTTGAAACTAGAAAAACGT+AGG | - | chr5_1:58364845-58364864 | None:intergenic | 30.0% | |
| ATATTCCACTTGGATCAAAT+AGG | + | chr5_1:58365049-58365068 | Msa0739810:CDS | 30.0% | |
| ! | AAGAAGGTGCAAAAAAAGAA+TGG | - | chr5_1:58365104-58365123 | None:intergenic | 30.0% |
| TAGACTATAGATAGCAAAGA+AGG | - | chr5_1:58365120-58365139 | None:intergenic | 30.0% | |
| ! | TTGATACATCTTCTGGTTAT+TGG | + | chr5_1:58365287-58365306 | Msa0739810:intron | 30.0% |
| CTTAACAGATATTTCGGTTA+GGG | - | chr5_1:58365330-58365349 | None:intergenic | 30.0% | |
| TGCAATAAGTAATGAGTTAC+TGG | - | chr5_1:58365378-58365397 | None:intergenic | 30.0% | |
| GACATGCTATATCTTGAAAA+GGG | + | chr5_1:58365441-58365460 | Msa0739810:CDS | 30.0% | |
| ! | GCTAGTTGAACATTTCTTTT+TGG | + | chr5_1:58365736-58365755 | Msa0739810:CDS | 30.0% |
| TGATGAGTTAGATATTGATC+AGG | - | chr5_1:58365770-58365789 | None:intergenic | 30.0% | |
| TGATCAATATCTAACTCATC+AGG | + | chr5_1:58365769-58365788 | Msa0739810:CDS | 30.0% | |
| ! | TAATGTTTTCCGATACCTTT+GGG | + | chr5_1:58366055-58366074 | Msa0739810:intron | 30.0% |
| !! | TGAATTTTACCCAAAGGTAT+CGG | - | chr5_1:58366067-58366086 | None:intergenic | 30.0% |
| ! | TTGCATTGAATTTTACCCAA+AGG | - | chr5_1:58366073-58366092 | None:intergenic | 30.0% |
| TCAATGCAAAATAACGATTC+TGG | + | chr5_1:58366084-58366103 | Msa0739810:intron | 30.0% | |
| CAATGCAAAATAACGATTCT+GGG | + | chr5_1:58366085-58366104 | Msa0739810:intron | 30.0% | |
| !! | ATTCTGGGATGAATTCTTAT+TGG | + | chr5_1:58366100-58366119 | Msa0739810:intron | 30.0% |
| GAAAACACAATGAAACAACT+TGG | - | chr5_1:58366148-58366167 | None:intergenic | 30.0% | |
| !! | CTCTTAAGTGATATTTTTGC+AGG | + | chr5_1:58366173-58366192 | Msa0739810:intron | 30.0% |
| ! | ATTCTAGAAACGAATCCATA+AGG | + | chr5_1:58366280-58366299 | Msa0739810:CDS | 30.0% |
| !! | AGATGACATACCTTTTTAGT+TGG | - | chr5_1:58366306-58366325 | None:intergenic | 30.0% |
| AACAGATTTGGAAGATGATT+TGG | - | chr5_1:58366353-58366372 | None:intergenic | 30.0% | |
| ! | AGATTTTCATAATACAAGCG+TGG | - | chr5_1:58366596-58366615 | None:intergenic | 30.0% |
| AAGCAAAGGTTACAAATATG+AGG | - | chr5_1:58366698-58366717 | None:intergenic | 30.0% | |
| GCAATGATGAAAATAAGCAA+AGG | - | chr5_1:58366712-58366731 | None:intergenic | 30.0% | |
| AACAATATGGTTGACTGAAT+GGG | + | chr5_1:58366978-58366997 | Msa0739810:CDS | 30.0% | |
| CTTATTGAGAGAGAAACATA+TGG | - | chr5_1:58367045-58367064 | None:intergenic | 30.0% | |
| CATATGTTTCTCTCTCAATA+AGG | + | chr5_1:58367043-58367062 | Msa0739810:CDS | 30.0% | |
| TCAATAAGGAGACTTGTAAT+TGG | + | chr5_1:58367057-58367076 | Msa0739810:CDS | 30.0% | |
| !! | ACATTTCAATAATGGACTTG+AGG | - | chr5_1:58367179-58367198 | None:intergenic | 30.0% |
| AAATACTAATCCCTATGTGT+AGG | + | chr5_1:58367534-58367553 | Msa0739810:intron | 30.0% | |
| TATCTAGTCTGATTACATCA+CGG | + | chr5_1:58367742-58367761 | Msa0739810:intron | 30.0% | |
| CATAACATTAACATCTACCA+TGG | - | chr5_1:58367860-58367879 | None:intergenic | 30.0% | |
| ! | GTCATCAAGTCTTTTATACA+AGG | + | chr5_1:58367901-58367920 | Msa0739810:CDS | 30.0% |
| GACATGATCATCAATATTGT+TGG | - | chr5_1:58367970-58367989 | None:intergenic | 30.0% | |
| CAGTTCATTAATGTGTTTCT+GGG | + | chr5_1:58368057-58368076 | Msa0739810:CDS | 30.0% | |
| ! | AGTTCATTAATGTGTTTCTG+GGG | + | chr5_1:58368058-58368077 | Msa0739810:CDS | 30.0% |
| GTCATATATATATGCATAGG+AGG | - | chr5_1:58368155-58368174 | None:intergenic | 30.0% | |
| ! | ATGAAGAAAGTTGCTTTCAT+TGG | - | chr5_1:58368303-58368322 | None:intergenic | 30.0% |
| !! | ATACATAATGGTTGATGGAT+GGG | + | chr5_1:58368326-58368345 | Msa0739810:CDS | 30.0% |
| ATGATGTATGGAAGTAGAAA+TGG | - | chr5_1:58368537-58368556 | None:intergenic | 30.0% | |
| CCAAAAAAGACAATGATGTA+TGG | - | chr5_1:58368549-58368568 | None:intergenic | 30.0% | |
| !!! | CCATACATCATTGTCTTTTT+TGG | + | chr5_1:58368546-58368565 | Msa0739810:CDS | 30.0% |
| !!! | CATCATTGTCTTTTTTGGTT+TGG | + | chr5_1:58368551-58368570 | Msa0739810:CDS | 30.0% |
| TACATGCACTAAAATACTGA+AGG | - | chr5_1:58368759-58368778 | None:intergenic | 30.0% | |
| ! | TATTAATGTCTGAAACTGAC+TGG | + | chr5_1:58368787-58368806 | Msa0739810:intron | 30.0% |
| GAAACCATATTGTCAAAACT+GGG | - | chr5_1:58368974-58368993 | None:intergenic | 30.0% | |
| TGAAACCATATTGTCAAAAC+TGG | - | chr5_1:58368975-58368994 | None:intergenic | 30.0% | |
| ! | TTTTACTACTCATCCATTAC+AGG | + | chr5_1:58369025-58369044 | Msa0739810:CDS | 30.0% |
| ! | AGAAGCATGTTCAAAACATA+GGG | - | chr5_1:58369156-58369175 | None:intergenic | 30.0% |
| ! | AAGAAGCATGTTCAAAACAT+AGG | - | chr5_1:58369157-58369176 | None:intergenic | 30.0% |
| TTGACTTCAACTCAAATCTA+AGG | - | chr5_1:58369497-58369516 | None:intergenic | 30.0% | |
| !! | TTAGATTTGAGTTGAAGTCA+AGG | + | chr5_1:58369496-58369515 | Msa0739810:three_prime_UTR | 30.0% |
| GATAGATAAGAGCAATATTC+AGG | + | chr5_1:58369682-58369701 | Msa0739810:three_prime_UTR | 30.0% | |
| ATGAGTGTTTGATGTTAAAC+AGG | + | chr5_1:58369715-58369734 | Msa0739810:three_prime_UTR | 30.0% | |
| TGAGTGTTTGATGTTAAACA+GGG | + | chr5_1:58369716-58369735 | Msa0739810:three_prime_UTR | 30.0% | |
| TGATGTTAAACAGGGTAATA+TGG | + | chr5_1:58369724-58369743 | Msa0739810:three_prime_UTR | 30.0% | |
| !!! | CACAATTTTGGTGCTACATA+AGG | + | chr5_1:58363126-58363145 | Msa0739810:five_prime_UTR | 35.0% |
| CATAAAGGGTTGTTGCAAAT+TGG | + | chr5_1:58363394-58363413 | Msa0739810:intron | 35.0% | |
| AGACAGTGACATAAAGAACA+TGG | - | chr5_1:58363639-58363658 | None:intergenic | 35.0% | |
| AAACGGCATCGTTGAAATAA+TGG | + | chr5_1:58363759-58363778 | Msa0739810:intron | 35.0% | |
| ! | TTGTATATTTTGCAGGGAGT+AGG | + | chr5_1:58363784-58363803 | Msa0739810:intron | 35.0% |
| GTAAGAATGCAATTGCAGTA+AGG | - | chr5_1:58363877-58363896 | None:intergenic | 35.0% | |
| TACTGCAATTGCATTCTTAC+TGG | + | chr5_1:58363877-58363896 | Msa0739810:CDS | 35.0% | |
| GGATTCAACCTATAAACGAT+AGG | + | chr5_1:58363915-58363934 | Msa0739810:CDS | 35.0% | |
| ! | ATAGGGTGTATTTTCCGAAA+TGG | + | chr5_1:58363933-58363952 | Msa0739810:CDS | 35.0% |
| ! | ATTTTCCGAAATGGTATCTG+AGG | + | chr5_1:58363942-58363961 | Msa0739810:CDS | 35.0% |
| ! | TTTTCCGAAATGGTATCTGA+GGG | + | chr5_1:58363943-58363962 | Msa0739810:CDS | 35.0% |
| TAGACTTCAGGTCATACATA+AGG | + | chr5_1:58364020-58364039 | Msa0739810:CDS | 35.0% | |
| TACTTGAGGATCTACTTACT+CGG | + | chr5_1:58364121-58364140 | Msa0739810:CDS | 35.0% | |
| TTCAGAACTGCAAACTTTAG+AGG | - | chr5_1:58364170-58364189 | None:intergenic | 35.0% | |
| AAAATGCTAGGAGTGAAATG+GGG | - | chr5_1:58364942-58364961 | None:intergenic | 35.0% | |
| GAAAATGCTAGGAGTGAAAT+GGG | - | chr5_1:58364943-58364962 | None:intergenic | 35.0% | |
| AGAAAATGCTAGGAGTGAAA+TGG | - | chr5_1:58364944-58364963 | None:intergenic | 35.0% | |
| ! | ACTCCTAGCATTTTCTGTTA+TGG | + | chr5_1:58364948-58364967 | Msa0739810:CDS | 35.0% |
| AACCACATTTGAACGTTTCA+AGG | - | chr5_1:58364998-58365017 | None:intergenic | 35.0% | |
| !!! | TTCTGGTTATTGGTTTTACG+AGG | + | chr5_1:58365297-58365316 | Msa0739810:intron | 35.0% |
| GCTTAACAGATATTTCGGTT+AGG | - | chr5_1:58365331-58365350 | None:intergenic | 35.0% | |
| ! | ATTTTGGACTCACTTGGTAA+TGG | + | chr5_1:58365399-58365418 | Msa0739810:CDS | 35.0% |
| GGACATGCTATATCTTGAAA+AGG | + | chr5_1:58365440-58365459 | Msa0739810:CDS | 35.0% | |
| AACTTGATCATACCGTGAAT+TGG | - | chr5_1:58365528-58365547 | None:intergenic | 35.0% | |
| GAGTTAGATATTGATCAGGA+TGG | - | chr5_1:58365766-58365785 | None:intergenic | 35.0% | |
| TATGTGCAGTTACAGAAAAC+AGG | - | chr5_1:58365801-58365820 | None:intergenic | 35.0% | |
| ! | GTAATGTTTTCCGATACCTT+TGG | + | chr5_1:58366054-58366073 | Msa0739810:intron | 35.0% |
| ACACAATGAAACAACTTGGT+AGG | - | chr5_1:58366144-58366163 | None:intergenic | 35.0% | |
| ATCCATAAGGCCAACTAAAA+AGG | + | chr5_1:58366293-58366312 | Msa0739810:CDS | 35.0% | |
| !!! | TACCTTTTTAGTTGGCCTTA+TGG | - | chr5_1:58366298-58366317 | None:intergenic | 35.0% |
| TGTGACCAACTAGAATTACA+TGG | - | chr5_1:58366420-58366439 | None:intergenic | 35.0% | |
| CGTTAAATTTCAGATAGAGC+TGG | + | chr5_1:58366843-58366862 | Msa0739810:intron | 35.0% | |
| CATTCAGTCAACCATATTGT+TGG | - | chr5_1:58366979-58366998 | None:intergenic | 35.0% | |
| CAACAATATGGTTGACTGAA+TGG | + | chr5_1:58366977-58366996 | Msa0739810:CDS | 35.0% | |
| TGTTATCCCAGTATATGTCA+CGG | - | chr5_1:58367014-58367033 | None:intergenic | 35.0% | |
| TGACATATACTGGGATAACA+TGG | + | chr5_1:58367014-58367033 | Msa0739810:CDS | 35.0% | |
| ! | CAGTCACTTGCTAATATAGA+AGG | + | chr5_1:58367132-58367151 | Msa0739810:CDS | 35.0% |
| !! | TCAATAATGGACTTGAGGAA+TGG | - | chr5_1:58367174-58367193 | None:intergenic | 35.0% |
| TCAATGTAGTCCTACACATA+GGG | - | chr5_1:58367547-58367566 | None:intergenic | 35.0% | |
| TGGAAGTTTATGTCTTTCAC+TGG | + | chr5_1:58367772-58367791 | Msa0739810:intron | 35.0% | |
| ! | CTTTGATAACTGTCTATCCA+TGG | + | chr5_1:58367840-58367859 | Msa0739810:intron | 35.0% |
| TTTATACAAGGTTTCCTTCC+TGG | + | chr5_1:58367913-58367932 | Msa0739810:CDS | 35.0% | |
| TTATACAAGGTTTCCTTCCT+GGG | + | chr5_1:58367914-58367933 | Msa0739810:CDS | 35.0% | |
| ACTTATAAACCCTTCGAACT+TGG | - | chr5_1:58367992-58368011 | None:intergenic | 35.0% | |
| GTTTATAAGTCAGTCTTCTC+TGG | + | chr5_1:58368002-58368021 | Msa0739810:CDS | 35.0% | |
| CTGGAAGATGTAATATCTTG+AGG | - | chr5_1:58368040-58368059 | None:intergenic | 35.0% | |
| CCAGAAACACATTAATGAAC+TGG | - | chr5_1:58368059-58368078 | None:intergenic | 35.0% | |
| CCAGTTCATTAATGTGTTTC+TGG | + | chr5_1:58368056-58368075 | Msa0739810:CDS | 35.0% | |
| TGCAGAATTCCAAAGACAAT+TGG | + | chr5_1:58368267-58368286 | Msa0739810:intron | 35.0% | |
| ATCGAAACACCAATTGTCTT+TGG | - | chr5_1:58368279-58368298 | None:intergenic | 35.0% | |
| !! | CATACATAATGGTTGATGGA+TGG | + | chr5_1:58368325-58368344 | Msa0739810:CDS | 35.0% |
| AGCTAATGTTTACCTGATGA+CGG | - | chr5_1:58368590-58368609 | None:intergenic | 35.0% | |
| ! | CAACATAGCACTCATTTTCA+TGG | - | chr5_1:58368672-58368691 | None:intergenic | 35.0% |
| ATGTTGTGTGTGTACAACTT+TGG | + | chr5_1:58368686-58368705 | Msa0739810:intron | 35.0% | |
| ATGCAAATACAATACGTCCA+TGG | - | chr5_1:58368872-58368891 | None:intergenic | 35.0% | |
| TGTCTCACAACTTCTGTTAA+TGG | + | chr5_1:58368896-58368915 | Msa0739810:CDS | 35.0% | |
| GTCTCACAACTTCTGTTAAT+GGG | + | chr5_1:58368897-58368916 | Msa0739810:CDS | 35.0% | |
| AATGGATGAGTAGTAAAAGC+AGG | - | chr5_1:58369023-58369042 | None:intergenic | 35.0% | |
| !!! | CGTTTTGTTTGGACAATTAC+CGG | - | chr5_1:58369373-58369392 | None:intergenic | 35.0% |
| TCTATAGACAGATTGAAGGT+TGG | + | chr5_1:58369571-58369590 | Msa0739810:three_prime_UTR | 35.0% | |
| AAACAGGGTAATATGGCATA+AGG | + | chr5_1:58369731-58369750 | Msa0739810:three_prime_UTR | 35.0% | |
| ! | TCATTGGTTGTTAAGATGGC+TGG | + | chr5_1:58363294-58363313 | Msa0739810:intron | 40.0% |
| AGTGATTGCAGTCACAATCA+TGG | - | chr5_1:58363708-58363727 | None:intergenic | 40.0% | |
| TCAAAGAACATGGCTTCACT+TGG | + | chr5_1:58363821-58363840 | Msa0739810:exon | 40.0% | |
| ! | ATGGCTTCACTTGGTGATAT+AGG | + | chr5_1:58363830-58363849 | Msa0739810:CDS | 40.0% |
| ! | TATAGGTTGAATCCGGAGTA+TGG | - | chr5_1:58363909-58363928 | None:intergenic | 40.0% |
| TTTCCGAAATGGTATCTGAG+GGG | + | chr5_1:58363944-58363963 | Msa0739810:CDS | 40.0% | |
| AAACCCCTCAGATACCATTT+CGG | - | chr5_1:58363950-58363969 | None:intergenic | 40.0% | |
| ! | TGTTCGATTAGTTCAGGTTC+CGG | - | chr5_1:58364079-58364098 | None:intergenic | 40.0% |
| ACTTGAGGATCTACTTACTC+GGG | + | chr5_1:58364122-58364141 | Msa0739810:CDS | 40.0% | |
| GGACCATAACAGAAAATGCT+AGG | - | chr5_1:58364954-58364973 | None:intergenic | 40.0% | |
| TGTCATTGGTCCAATTGACA+GGG | - | chr5_1:58364975-58364994 | None:intergenic | 40.0% | |
| ! | TGAACGTTTCAAGGTGTCAT+TGG | - | chr5_1:58364989-58365008 | None:intergenic | 40.0% |
| CACCTTGAAACGTTCAAATG+TGG | + | chr5_1:58364993-58365012 | Msa0739810:CDS | 40.0% | |
| ACGTACCTATTTGATCCAAG+TGG | - | chr5_1:58365057-58365076 | None:intergenic | 40.0% | |
| ! | TTGCAGATTTTGGACTCACT+TGG | + | chr5_1:58365393-58365412 | Msa0739810:intron | 40.0% |
| ! | TGGCTTATGCTTTTACCTTC+TGG | + | chr5_1:58365419-58365438 | Msa0739810:CDS | 40.0% |
| CAAGATATAGCATGTCCAGA+AGG | - | chr5_1:58365437-58365456 | None:intergenic | 40.0% | |
| ! | ATTGCTTGAAGAAGGAGCAT+GGG | - | chr5_1:58365651-58365670 | None:intergenic | 40.0% |
| AATTGCTTGAAGAAGGAGCA+TGG | - | chr5_1:58365652-58365671 | None:intergenic | 40.0% | |
| GCACAGTAATTGCTTGAAGA+AGG | - | chr5_1:58365659-58365678 | None:intergenic | 40.0% | |
| CAATTACTGTGCATTTGTGC+AGG | + | chr5_1:58365667-58365686 | Msa0739810:intron | 40.0% | |
| CATTTGTGCAGGTACTTGTT+AGG | + | chr5_1:58365678-58365697 | Msa0739810:intron | 40.0% | |
| GTTCATAGAGACAGGATTAC+TGG | - | chr5_1:58366329-58366348 | None:intergenic | 40.0% | |
| ! | GATTTGGAGTTCATAGAGAC+AGG | - | chr5_1:58366337-58366356 | None:intergenic | 40.0% |
| ! | TAGAATTACATGGTGCCAGA+GGG | - | chr5_1:58366410-58366429 | None:intergenic | 40.0% |
| TGGCACCATGTAATTCTAGT+TGG | + | chr5_1:58366412-58366431 | Msa0739810:intron | 40.0% | |
| !!! | ACTGGCTTTTTAGGTCTTTG+TGG | + | chr5_1:58366452-58366471 | Msa0739810:CDS | 40.0% |
| AGGACACAAGTTCTCTTGTA+TGG | - | chr5_1:58366678-58366697 | None:intergenic | 40.0% | |
| GATAGAGCTGGAGAAAGATA+AGG | + | chr5_1:58366855-58366874 | Msa0739810:intron | 40.0% | |
| GCTGCTGGCATTATAGATTT+AGG | - | chr5_1:58366892-58366911 | None:intergenic | 40.0% | |
| TTATCCCAGTATATGTCACG+GGG | - | chr5_1:58367012-58367031 | None:intergenic | 40.0% | |
| GTTATCCCAGTATATGTCAC+GGG | - | chr5_1:58367013-58367032 | None:intergenic | 40.0% | |
| AGTGACTGTACGAATGCAAT+GGG | - | chr5_1:58367120-58367139 | None:intergenic | 40.0% | |
| AAGTGACTGTACGAATGCAA+TGG | - | chr5_1:58367121-58367140 | None:intergenic | 40.0% | |
| AATAGCTTGAACAACCCATC+TGG | + | chr5_1:58367337-58367356 | Msa0739810:intron | 40.0% | |
| ATAGCTTGAACAACCCATCT+GGG | + | chr5_1:58367338-58367357 | Msa0739810:intron | 40.0% | |
| GTCAATGTAGTCCTACACAT+AGG | - | chr5_1:58367548-58367567 | None:intergenic | 40.0% | |
| GATTACATCACGGAATATGC+TGG | + | chr5_1:58367752-58367771 | Msa0739810:intron | 40.0% | |
| AATAGCTTCAAAGCAATCCC+AGG | - | chr5_1:58367934-58367953 | None:intergenic | 40.0% | |
| ATGATCATGTCCAAGTTCGA+AGG | + | chr5_1:58367979-58367998 | Msa0739810:CDS | 40.0% | |
| TGATCATGTCCAAGTTCGAA+GGG | + | chr5_1:58367980-58367999 | Msa0739810:CDS | 40.0% | |
| ! | TTTCTGGGGAGCATAATTAC+CGG | + | chr5_1:58368072-58368091 | Msa0739810:CDS | 40.0% |
| TAATTGTTGGAATGCAGTCC+CGG | - | chr5_1:58368094-58368113 | None:intergenic | 40.0% | |
| !! | GATGTGCTGGTGAGATTTTA+AGG | + | chr5_1:58368352-58368371 | Msa0739810:CDS | 40.0% |
| AAAAGACCGTGAAGAAGCAA+TGG | + | chr5_1:58368428-58368447 | Msa0739810:CDS | 40.0% | |
| GTATTGAAACCAATAGTCCC+AGG | - | chr5_1:58368456-58368475 | None:intergenic | 40.0% | |
| !! | GGGACTATTGGTTTCAATAC+AGG | + | chr5_1:58368456-58368475 | Msa0739810:CDS | 40.0% |
| ATATCTTGTCTACCGTCATC+AGG | + | chr5_1:58368575-58368594 | Msa0739810:CDS | 40.0% | |
| !! | GAAAAGCATCAAAACAGCGA+AGG | - | chr5_1:58368620-58368639 | None:intergenic | 40.0% |
| ! | AACCAAGAATATGAGAGTGC+TGG | + | chr5_1:58368828-58368847 | Msa0739810:CDS | 40.0% |
| !! | CTCTCCCAGTTTTGACAATA+TGG | + | chr5_1:58368967-58368986 | Msa0739810:CDS | 40.0% |
| !!! | ATGGTTTCATCGGTTTTGCA+AGG | + | chr5_1:58368986-58369005 | Msa0739810:CDS | 40.0% |
| !!! | TGGTTTCATCGGTTTTGCAA+GGG | + | chr5_1:58368987-58369006 | Msa0739810:CDS | 40.0% |
| AGCAATGGTCAAAGACACAT+TGG | + | chr5_1:58369225-58369244 | Msa0739810:CDS | 40.0% | |
| GATGGATATATGCATCATGG+AGG | - | chr5_1:58369288-58369307 | None:intergenic | 40.0% | |
| ! | CATCCCGTTTTCAAAGATGA+CGG | + | chr5_1:58369304-58369323 | Msa0739810:CDS | 40.0% |
| ! | TCTCCGTCATCTTTGAAAAC+GGG | - | chr5_1:58369310-58369329 | None:intergenic | 40.0% |
| ! | GTCTCCGTCATCTTTGAAAA+CGG | - | chr5_1:58369311-58369330 | None:intergenic | 40.0% |
| TCATTACAAGCCTCTATGCA+TGG | + | chr5_1:58369439-58369458 | Msa0739810:CDS | 40.0% | |
| CTTAATGACTAGTGCATGGT+TGG | + | chr5_1:58369537-58369556 | Msa0739810:three_prime_UTR | 40.0% | |
| TTAGTTCAACGCTCAAGCAG+GGG | - | chr5_1:58362993-58363012 | None:intergenic | 45.0% | |
| GTTAGTTCAACGCTCAAGCA+GGG | - | chr5_1:58362994-58363013 | None:intergenic | 45.0% | |
| TGTTAGTTCAACGCTCAAGC+AGG | - | chr5_1:58362995-58363014 | None:intergenic | 45.0% | |
| TACTGGCATTTGCCATACTC+CGG | + | chr5_1:58363894-58363913 | Msa0739810:CDS | 45.0% | |
| AATGGTATCTGAGGGGTTTG+AGG | + | chr5_1:58363951-58363970 | Msa0739810:CDS | 45.0% | |
| ! | CCTGCATGTTCGATTAGTTC+AGG | - | chr5_1:58364085-58364104 | None:intergenic | 45.0% |
| CCTGAACTAATCGAACATGC+AGG | + | chr5_1:58364082-58364101 | Msa0739810:CDS | 45.0% | |
| ACTAATCGAACATGCAGGCT+TGG | + | chr5_1:58364087-58364106 | Msa0739810:CDS | 45.0% | |
| TGGATTCTGCTGCATACTTG+AGG | + | chr5_1:58364107-58364126 | Msa0739810:CDS | 45.0% | |
| CTGTTATGGTCCCTGTCAAT+TGG | + | chr5_1:58364962-58364981 | Msa0739810:CDS | 45.0% | |
| ! | GTGTCATTGGTCCAATTGAC+AGG | - | chr5_1:58364976-58364995 | None:intergenic | 45.0% |
| ATACCGTGAATTGGTCAGGA+CGG | - | chr5_1:58365519-58365538 | None:intergenic | 45.0% | |
| GATCATACCGTGAATTGGTC+AGG | - | chr5_1:58365523-58365542 | None:intergenic | 45.0% | |
| ! | TTGCTTGAAGAAGGAGCATG+GGG | - | chr5_1:58365650-58365669 | None:intergenic | 45.0% |
| ! | ACTGATTCATCAGCATCAGG+CGG | - | chr5_1:58365710-58365729 | None:intergenic | 45.0% |
| ! | CTGACTGATTCATCAGCATC+AGG | - | chr5_1:58365713-58365732 | None:intergenic | 45.0% |
| CCAGATGAAGAGAGGCAATT+AGG | - | chr5_1:58365824-58365843 | None:intergenic | 45.0% | |
| CCTAATTGCCTCTCTTCATC+TGG | + | chr5_1:58365821-58365840 | Msa0739810:intron | 45.0% | |
| TACAAGCTCCAGATGAAGAG+AGG | - | chr5_1:58365832-58365851 | None:intergenic | 45.0% | |
| CTATTTCCCTTTCTTCCCTC+TGG | + | chr5_1:58366392-58366411 | Msa0739810:intron | 45.0% | |
| ! | CTAGAATTACATGGTGCCAG+AGG | - | chr5_1:58366411-58366430 | None:intergenic | 45.0% |
| !!! | TGCTTGCAGACTGGCTTTTT+AGG | + | chr5_1:58366443-58366462 | Msa0739810:intron | 45.0% |
| AGGTCTTTGTGGCAGTAAAG+TGG | + | chr5_1:58366463-58366482 | Msa0739810:CDS | 45.0% | |
| CAGTGCATGCTTCTCCAAAT+TGG | + | chr5_1:58366731-58366750 | Msa0739810:intron | 45.0% | |
| ! | AATGGACTTGAGGAATGGTG+CGG | - | chr5_1:58367169-58367188 | None:intergenic | 45.0% |
| !! | GAGGAGCAAACTCTAAGGTA+AGG | - | chr5_1:58367389-58367408 | None:intergenic | 45.0% |
| CTTGAGAGGAGCAAACTCTA+AGG | - | chr5_1:58367394-58367413 | None:intergenic | 45.0% | |
| ! | CTTAGAGTTTGCTCCTCTCA+AGG | + | chr5_1:58367392-58367411 | Msa0739810:intron | 45.0% |
| ! | ATTCTCCCTGGTGCTAAGTT+TGG | + | chr5_1:58367426-58367445 | Msa0739810:intron | 45.0% |
| ! | TTCTGGGGAGCATAATTACC+GGG | + | chr5_1:58368073-58368092 | Msa0739810:CDS | 45.0% |
| !! | ATAATGGTTGATGGATGGGC+AGG | + | chr5_1:58368330-58368349 | Msa0739810:CDS | 45.0% |
| CAGGATCCATTGCTTCTTCA+CGG | - | chr5_1:58368437-58368456 | None:intergenic | 45.0% | |
| GTGAAGAAGCAATGGATCCT+GGG | + | chr5_1:58368436-58368455 | Msa0739810:CDS | 45.0% | |
| GTGTGACTACAGCATACACA+AGG | - | chr5_1:58368515-58368534 | None:intergenic | 45.0% | |
| CTCCAGCACTCTCATATTCT+TGG | - | chr5_1:58368833-58368852 | None:intergenic | 45.0% | |
| ACAATACGTCCATGGACATC+AGG | - | chr5_1:58368864-58368883 | None:intergenic | 45.0% | |
| ! | TTTTGTGGTGCGTGAACTTC+AGG | + | chr5_1:58369201-58369220 | Msa0739810:intron | 45.0% |
| CGGGATGGATATATGCATCA+TGG | - | chr5_1:58369291-58369310 | None:intergenic | 45.0% | |
| ! | CGTCATCTTTGAAAACGGGA+TGG | - | chr5_1:58369306-58369325 | None:intergenic | 45.0% |
| GTGATGTGATGAGTCAAGAG+TGG | + | chr5_1:58369338-58369357 | Msa0739810:CDS | 45.0% | |
| TGTGATGAGTCAAGAGTGGA+AGG | + | chr5_1:58369342-58369361 | Msa0739810:CDS | 45.0% | |
| ATCAGTAGTGCCATGCATAG+AGG | - | chr5_1:58369452-58369471 | None:intergenic | 45.0% | |
| GTCAAGGACTAAGTTCGTGT+TGG | + | chr5_1:58369512-58369531 | Msa0739810:three_prime_UTR | 45.0% | |
| GGAGCTTAATGACTAGTGCA+TGG | + | chr5_1:58369533-58369552 | Msa0739810:three_prime_UTR | 45.0% | |
| TTGAGGTCCAGTCCATTGCA+AGG | + | chr5_1:58363968-58363987 | Msa0739810:CDS | 50.0% | |
| ACAAATGCCCCTCCTTGCAA+TGG | - | chr5_1:58363983-58364002 | None:intergenic | 50.0% | |
| ! | TGCTTGAAGAAGGAGCATGG+GGG | - | chr5_1:58365649-58365668 | None:intergenic | 50.0% |
| ! | ATGGTGCCAGAGGGAAGAAA+GGG | - | chr5_1:58366401-58366420 | None:intergenic | 50.0% |
| GTCACATTGTGCTTGCAGAC+TGG | + | chr5_1:58366434-58366453 | Msa0739810:intron | 50.0% | |
| AGAGCCCCGTGACATATACT+GGG | + | chr5_1:58367005-58367024 | Msa0739810:CDS | 50.0% | |
| CTTGAACAACCCATCTGGGT+TGG | + | chr5_1:58367342-58367361 | Msa0739810:intron | 50.0% | |
| !! | TTGGTCTCGTGGTGTTGACT+TGG | + | chr5_1:58367361-58367380 | Msa0739810:intron | 50.0% |
| !! | TGGTCTCGTGGTGTTGACTT+GGG | + | chr5_1:58367362-58367381 | Msa0739810:intron | 50.0% |
| TTTGCTCCTCTCAAGGTCTC+AGG | + | chr5_1:58367399-58367418 | Msa0739810:intron | 50.0% | |
| ATCGAACCTGAGACCTTGAG+AGG | - | chr5_1:58367408-58367427 | None:intergenic | 50.0% | |
| ! | TCCCTGGTGCTAAGTTTGGT+GGG | + | chr5_1:58367430-58367449 | Msa0739810:intron | 50.0% |
| GCTTCAAAGCAATCCCAGGA+AGG | - | chr5_1:58367930-58367949 | None:intergenic | 50.0% | |
| CGTGAAGAAGCAATGGATCC+TGG | + | chr5_1:58368435-58368454 | Msa0739810:CDS | 50.0% | |
| GCAATGGATCCTGGGACTAT+TGG | + | chr5_1:58368444-58368463 | Msa0739810:CDS | 50.0% | |
| !! | ATGAGAGTGCTGGAGCATTC+TGG | + | chr5_1:58368838-58368857 | Msa0739810:CDS | 50.0% |
| ACTGGGAGAGCGATGAGTAA+TGG | - | chr5_1:58368957-58368976 | None:intergenic | 50.0% | |
| GCGTGAACTTCAGGAAGCAA+TGG | + | chr5_1:58369210-58369229 | Msa0739810:intron | 50.0% | |
| TCAAGAGTGGAAGGAAGAGC+CGG | + | chr5_1:58369351-58369370 | Msa0739810:CDS | 50.0% | |
| TCCAAACAAAACGCCAGTCG+CGG | + | chr5_1:58369380-58369399 | Msa0739810:CDS | 50.0% | |
| GAGCCACCACTATGTTTGCT+AGG | - | chr5_1:58369421-58369440 | None:intergenic | 50.0% | |
| AGGTCCAGTCCATTGCAAGG+AGG | + | chr5_1:58363971-58363990 | Msa0739810:CDS | 55.0% | |
| GGTCCAGTCCATTGCAAGGA+GGG | + | chr5_1:58363972-58363991 | Msa0739810:CDS | 55.0% | |
| GTCCAGTCCATTGCAAGGAG+GGG | + | chr5_1:58363973-58363992 | Msa0739810:CDS | 55.0% | |
| GCCTGCTGCATTGCAAATGC+CGG | + | chr5_1:58364057-58364076 | Msa0739810:CDS | 55.0% | |
| TCCGGCATTTGCAATGCAGC+AGG | - | chr5_1:58364061-58364080 | None:intergenic | 55.0% | |
| ACGCCGTCCTGACCAATTCA+CGG | + | chr5_1:58365513-58365532 | Msa0739810:CDS | 55.0% | |
| ! | CATGGTGCCAGAGGGAAGAA+AGG | - | chr5_1:58366402-58366421 | None:intergenic | 55.0% |
| CAGTATATGTCACGGGGCTC+TGG | - | chr5_1:58367006-58367025 | None:intergenic | 55.0% | |
| CAGAGCCCCGTGACATATAC+TGG | + | chr5_1:58367004-58367023 | Msa0739810:CDS | 55.0% | |
| ACCACGAGACCAACCCAGAT+GGG | - | chr5_1:58367354-58367373 | None:intergenic | 55.0% | |
| GTCTCAGGTTCGATTCTCCC+TGG | + | chr5_1:58367414-58367433 | Msa0739810:intron | 55.0% | |
| ! | CTCCCTGGTGCTAAGTTTGG+TGG | + | chr5_1:58367429-58367448 | Msa0739810:intron | 55.0% |
| GCCCACCAAACTTAGCACCA+GGG | - | chr5_1:58367434-58367453 | None:intergenic | 55.0% | |
| AGCCCACCAAACTTAGCACC+AGG | - | chr5_1:58367435-58367454 | None:intergenic | 55.0% | |
| GCATTCTGGCCTGATGTCCA+TGG | + | chr5_1:58368852-58368871 | Msa0739810:CDS | 55.0% | |
| !! | TCCGCGACTGGCGTTTTGTT+TGG | - | chr5_1:58369384-58369403 | None:intergenic | 55.0% |
| ! | CCACTATGTTTGCTAGGCGC+AGG | - | chr5_1:58369415-58369434 | None:intergenic | 55.0% |
| CCTGCGCCTAGCAAACATAG+TGG | + | chr5_1:58369412-58369431 | Msa0739810:CDS | 55.0% | |
| GCGCCTAGCAAACATAGTGG+TGG | + | chr5_1:58369415-58369434 | Msa0739810:CDS | 55.0% | |
| TGCCCCTCCTTGCAATGGAC+TGG | - | chr5_1:58363978-58363997 | None:intergenic | 60.0% | |
| !! | ACCCATCTGGGTTGGTCTCG+TGG | + | chr5_1:58367350-58367369 | Msa0739810:intron | 60.0% |
| CACCACGAGACCAACCCAGA+TGG | - | chr5_1:58367355-58367374 | None:intergenic | 60.0% | |
| GATGGATGGGCAGGATGTGC+TGG | + | chr5_1:58368339-58368358 | Msa0739810:CDS | 60.0% | |
| CAGGTGTGTTCTTCCGCGAC+TGG | - | chr5_1:58369396-58369415 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 58362924 | 58369816 | 58362924 | ID=Msa0739810;Name=Msa0739810 |
| chr5_1 | mRNA | 58362924 | 58369816 | 58362924 | ID=Msa0739810-mRNA-1;Parent=Msa0739810;Name=Msa0739810-mRNA-1;_AED=0.06;_eAED=0.06;_QI=255|1|1|1|0.90|0.83|12|339|766 |
| chr5_1 | exon | 58362924 | 58363147 | 58362924 | ID=Msa0739810-mRNA-1:exon:16616;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58363799 | 58364143 | 58363799 | ID=Msa0739810-mRNA-1:exon:16617;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58364924 | 58365070 | 58364924 | ID=Msa0739810-mRNA-1:exon:16618;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58365399 | 58365534 | 58365399 | ID=Msa0739810-mRNA-1:exon:16619;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58365689 | 58365790 | 58365689 | ID=Msa0739810-mRNA-1:exon:16620;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58366195 | 58366314 | 58366195 | ID=Msa0739810-mRNA-1:exon:16621;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58366452 | 58366532 | 58366452 | ID=Msa0739810-mRNA-1:exon:16622;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58366856 | 58367196 | 58366856 | ID=Msa0739810-mRNA-1:exon:16623;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58367897 | 58368142 | 58367897 | ID=Msa0739810-mRNA-1:exon:16624;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58368272 | 58368596 | 58368272 | ID=Msa0739810-mRNA-1:exon:16625;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58368813 | 58369046 | 58368813 | ID=Msa0739810-mRNA-1:exon:16626;Parent=Msa0739810-mRNA-1 |
| chr5_1 | exon | 58369223 | 58369816 | 58369223 | ID=Msa0739810-mRNA-1:exon:16627;Parent=Msa0739810-mRNA-1 |
| chr5_1 | five_prime_UTR | 58362924 | 58363147 | 58362924 | ID=Msa0739810-mRNA-1:five_prime_utr;Parent=Msa0739810-mRNA-1 |
| chr5_1 | five_prime_UTR | 58363799 | 58363829 | 58363799 | ID=Msa0739810-mRNA-1:five_prime_utr;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58363830 | 58364143 | 58363830 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58364924 | 58365070 | 58364924 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58365399 | 58365534 | 58365399 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58365689 | 58365790 | 58365689 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58366195 | 58366314 | 58366195 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58366452 | 58366532 | 58366452 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58366856 | 58367196 | 58366856 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58367897 | 58368142 | 58367897 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58368272 | 58368596 | 58368272 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58368813 | 58369046 | 58368813 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | CDS | 58369223 | 58369477 | 58369223 | ID=Msa0739810-mRNA-1:cds;Parent=Msa0739810-mRNA-1 |
| chr5_1 | three_prime_UTR | 58369478 | 58369816 | 58369478 | ID=Msa0739810-mRNA-1:three_prime_utr;Parent=Msa0739810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
