Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740170 | XP_003617067.1 | 91.326 | 611 | 3 | 2 | 1 | 611 | 1 | 561 | 0.0 | 1107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740170 | sp|Q9SF16|TCPH_ARATH | 85.009 | 587 | 38 | 2 | 1 | 587 | 1 | 537 | 0.0 | 976 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740170 | G7K2W1 | 91.326 | 611 | 3 | 2 | 1 | 611 | 1 | 561 | 0.0 | 1107 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0740170 | Msa0820460 | 0.880315 | 6.073570e-70 | -8.615850e-47 |
| Msa0223300 | Msa0740170 | 0.812329 | 4.478882e-51 | -8.615850e-47 |
| Msa0532050 | Msa0740170 | 0.858440 | 8.229287e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740170 | MtrunA17_Chr5g0440381 | 91.326 | 611 | 3 | 2 | 1 | 611 | 1 | 561 | 0.0 | 1107 |
| Msa0740170 | MtrunA17_Chr8g0380331 | 35.540 | 574 | 308 | 10 | 21 | 582 | 17 | 540 | 2.27e-103 | 323 |
| Msa0740170 | MtrunA17_Chr7g0241881 | 33.101 | 574 | 313 | 9 | 11 | 576 | 6 | 516 | 2.08e-90 | 289 |
| Msa0740170 | MtrunA17_Chr7g0272821 | 32.689 | 569 | 322 | 7 | 11 | 576 | 6 | 516 | 5.41e-90 | 288 |
| Msa0740170 | MtrunA17_Chr2g0282161 | 29.442 | 591 | 350 | 6 | 5 | 586 | 1 | 533 | 8.92e-84 | 273 |
| Msa0740170 | MtrunA17_Chr3g0123341 | 29.361 | 579 | 343 | 10 | 6 | 576 | 10 | 530 | 1.02e-70 | 238 |
| Msa0740170 | MtrunA17_Chr1g0160221 | 25.044 | 571 | 365 | 11 | 11 | 576 | 11 | 523 | 9.18e-54 | 192 |
| Msa0740170 | MtrunA17_Chr6g0461541 | 25.044 | 571 | 365 | 11 | 11 | 576 | 8 | 520 | 6.78e-52 | 187 |
| Msa0740170 | MtrunA17_Chr7g0214841 | 25.793 | 473 | 313 | 7 | 28 | 482 | 22 | 474 | 1.33e-45 | 169 |
| Msa0740170 | MtrunA17_Chr3g0139481 | 25.588 | 340 | 205 | 4 | 243 | 576 | 175 | 472 | 9.94e-27 | 114 |
| Msa0740170 | MtrunA17_Chr3g0139481 | 43.448 | 145 | 78 | 2 | 27 | 171 | 28 | 168 | 2.16e-25 | 109 |
| Msa0740170 | MtrunA17_Chr8g0392171 | 28.521 | 284 | 148 | 8 | 216 | 483 | 14 | 258 | 1.42e-22 | 98.2 |
| Msa0740170 | MtrunA17_Chr5g0421251 | 22.428 | 486 | 297 | 17 | 35 | 478 | 59 | 506 | 2.11e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0740170 | AT3G11830.1 | 85.009 | 587 | 38 | 2 | 1 | 587 | 1 | 537 | 0.0 | 976 |
| Msa0740170 | AT3G11830.2 | 84.668 | 587 | 38 | 3 | 1 | 587 | 1 | 535 | 0.0 | 966 |
| Msa0740170 | AT3G20050.1 | 34.083 | 578 | 328 | 8 | 17 | 587 | 13 | 544 | 1.74e-103 | 324 |
| Msa0740170 | AT5G20890.1 | 32.807 | 570 | 320 | 8 | 11 | 576 | 6 | 516 | 9.41e-87 | 280 |
| Msa0740170 | AT5G26360.1 | 29.744 | 585 | 356 | 6 | 5 | 586 | 1 | 533 | 1.24e-80 | 265 |
| Msa0740170 | AT3G18190.1 | 30.576 | 556 | 326 | 8 | 27 | 576 | 32 | 533 | 4.24e-77 | 255 |
| Msa0740170 | AT1G24510.1 | 28.055 | 581 | 352 | 9 | 6 | 578 | 10 | 532 | 1.38e-67 | 229 |
| Msa0740170 | AT1G24510.3 | 26.806 | 526 | 320 | 8 | 60 | 578 | 12 | 479 | 4.12e-55 | 194 |
| Msa0740170 | AT3G03960.1 | 25.260 | 578 | 369 | 10 | 5 | 576 | 6 | 526 | 8.34e-55 | 195 |
| Msa0740170 | AT1G24510.2 | 26.070 | 514 | 315 | 8 | 72 | 578 | 1 | 456 | 5.87e-50 | 180 |
| Msa0740170 | AT3G02530.1 | 25.160 | 469 | 319 | 7 | 29 | 482 | 23 | 474 | 7.84e-44 | 164 |
| Msa0740170 | AT5G16070.1 | 25.427 | 468 | 318 | 6 | 29 | 482 | 23 | 473 | 2.71e-43 | 163 |
Find 173 sgRNAs with CRISPR-Local
Find 539 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGAAGAGAGAGAGTTATT+AGG | 0.187281 | 5_1:-58987399 | None:intergenic |
| ACACTTTCTTCAAAACTTAT+AGG | 0.194659 | 5_1:+58989122 | Msa0740170:CDS |
| ATTCATTTGCCAACTTTGTC+TGG | 0.204932 | 5_1:+58994323 | Msa0740170:CDS |
| CTTATTTGCTTGAAGGTTCT+TGG | 0.219293 | 5_1:+58991841 | Msa0740170:intron |
| AGGAAGAGAGAGAGTTATTA+GGG | 0.227511 | 5_1:-58987398 | None:intergenic |
| GAATATTATTTATGACAAAT+TGG | 0.227744 | 5_1:+58991417 | Msa0740170:CDS |
| TAGCCTTATGTAGTAATCTA+TGG | 0.238863 | 5_1:+58996210 | Msa0740170:three_prime_UTR |
| AAAATTTAATACGGAGTTAT+AGG | 0.246244 | 5_1:+58988889 | Msa0740170:CDS |
| TAGTGCTGTTATAATGATTC+AGG | 0.275937 | 5_1:+58991058 | Msa0740170:intron |
| AAAGGAATTCTTTGCATCTA+TGG | 0.289996 | 5_1:+58989151 | Msa0740170:CDS |
| TGCCACTGGATGTATGTTTC+TGG | 0.292353 | 5_1:+58995925 | Msa0740170:three_prime_UTR |
| GAAATATTGGCACCTTATTT+CGG | 0.304281 | 5_1:-58991254 | None:intergenic |
| AAAAGAGTTGCTGCTGCAAC+TGG | 0.305439 | 5_1:+58991702 | Msa0740170:CDS |
| GAAGGTGAGGGTGCTCCATT+TGG | 0.310401 | 5_1:+58994271 | Msa0740170:intron |
| CAGAAACACGCGCTTCCTTC+TGG | 0.317305 | 5_1:+58993256 | Msa0740170:CDS |
| TGGTATGAAATGGTAATATT+GGG | 0.318845 | 5_1:+58995992 | Msa0740170:three_prime_UTR |
| TTTATCTACAGATGTTGATA+TGG | 0.326864 | 5_1:+58995972 | Msa0740170:three_prime_UTR |
| TTATTAGATGGCTGTTGTTT+GGG | 0.328031 | 5_1:+58996117 | Msa0740170:three_prime_UTR |
| GAGGGGTTGAATTTATTAGA+TGG | 0.333080 | 5_1:+58996105 | Msa0740170:three_prime_UTR |
| TGATTAGAAATGTGTTCTAA+TGG | 0.334547 | 5_1:+58995859 | Msa0740170:exon |
| CCAATGATCTTATATTCAAC+TGG | 0.345120 | 5_1:-58993373 | None:intergenic |
| ATGGTATGAAATGGTAATAT+TGG | 0.350835 | 5_1:+58995991 | Msa0740170:three_prime_UTR |
| GTTCTCTCACGCCTGGCTAT+TGG | 0.351309 | 5_1:+58991469 | Msa0740170:CDS |
| AGAAAGAAAATGCCGAAATA+AGG | 0.352104 | 5_1:+58991242 | Msa0740170:CDS |
| TTACTACATATACCTGCATT+TGG | 0.360387 | 5_1:+58993315 | Msa0740170:CDS |
| AAGGTGAGGGTGCTCCATTT+GGG | 0.365916 | 5_1:+58994272 | Msa0740170:intron |
| ATCTTATATTCAACTGGGCT+TGG | 0.369923 | 5_1:-58993367 | None:intergenic |
| TGCTACAGAGGCAGCTTGCC+TGG | 0.375773 | 5_1:+58994463 | Msa0740170:CDS |
| ATGCAATCATGATTGTTAGA+AGG | 0.376275 | 5_1:+58992113 | Msa0740170:CDS |
| TTTATTAGATGGCTGTTGTT+TGG | 0.376817 | 5_1:+58996116 | Msa0740170:three_prime_UTR |
| CTGATCAAACTAGGATTTGA+TGG | 0.387094 | 5_1:+58996032 | Msa0740170:three_prime_UTR |
| CGCGACTCATTTCTTGTCAA+TGG | 0.388192 | 5_1:+58991112 | Msa0740170:CDS |
| GAGCTAGCAGTTAGCATTGA+GGG | 0.389844 | 5_1:+58989050 | Msa0740170:CDS |
| CAGCATTGTCACATAATTGC+CGG | 0.405508 | 5_1:-58993198 | None:intergenic |
| TTGTGCGTGCATGCTGCCTT+AGG | 0.406875 | 5_1:-58992292 | None:intergenic |
| CAGCATGCACGCACAATAGC+TGG | 0.407586 | 5_1:+58992299 | Msa0740170:CDS |
| GATTAGAAATGTGTTCTAAT+GGG | 0.411022 | 5_1:+58995860 | Msa0740170:exon |
| AAACTCATCCACGATGATAA+AGG | 0.411477 | 5_1:+58987689 | Msa0740170:CDS |
| TTCACTCTCAAAATTTAATA+CGG | 0.412053 | 5_1:+58988880 | Msa0740170:CDS |
| TTGCAATTGGGACTGATGAT+AGG | 0.412581 | 5_1:+58989189 | Msa0740170:CDS |
| AGCAATATCAACTAAGATCT+TGG | 0.420275 | 5_1:-58987777 | None:intergenic |
| TATCTAAATACTTAGTGTTA+AGG | 0.421493 | 5_1:-58996169 | None:intergenic |
| GGAGGCAGAGGTCGCGGAGG+TGG | 0.424216 | 5_1:+58995805 | Msa0740170:CDS |
| GAAGAGAAGAAAAGTTTGCT+TGG | 0.426567 | 5_1:+58989083 | Msa0740170:CDS |
| GTGGACGCTGTAATTGCAAT+TGG | 0.430540 | 5_1:+58989176 | Msa0740170:CDS |
| ATCTTCAATGGATGTCCATC+TGG | 0.432018 | 5_1:+58991913 | Msa0740170:CDS |
| ATATGAAAATGTCTTCTTGA+AGG | 0.433340 | 5_1:-58991140 | None:intergenic |
| TTCATTTGCCAACTTTGTCT+GGG | 0.434603 | 5_1:+58994324 | Msa0740170:CDS |
| GATGATAGGTTAAACATGAT+TGG | 0.435001 | 5_1:+58989203 | Msa0740170:CDS |
| TCTCCGTGGTGGAGCCGATC+AGG | 0.435496 | 5_1:+58991954 | Msa0740170:CDS |
| GGAGAACTATGGTGGCTGTT+TGG | 0.439617 | 5_1:-58991936 | None:intergenic |
| AGCCTCTCCTTGTGCACTCT+CGG | 0.442120 | 5_1:-58995767 | None:intergenic |
| ACGCCTGGCTATTGGTGATC+TGG | 0.446104 | 5_1:+58991477 | Msa0740170:CDS |
| CCAGTTGAATATAAGATCAT+TGG | 0.446606 | 5_1:+58993373 | Msa0740170:CDS |
| ATGGTAATATTGGGGATTCT+AGG | 0.449197 | 5_1:+58996001 | Msa0740170:three_prime_UTR |
| GGCTCCACCACGGAGAACTA+TGG | 0.450646 | 5_1:-58991947 | None:intergenic |
| AGTAGCGCCGTCGTTAGAAA+TGG | 0.453461 | 5_1:-58987720 | None:intergenic |
| ATTCTTTGCATCTATGGTTG+TGG | 0.462064 | 5_1:+58989157 | Msa0740170:CDS |
| TGTAATATGCGCAATGCCAC+TGG | 0.462560 | 5_1:+58995911 | Msa0740170:three_prime_UTR |
| GGTTTCCGTGGCCGTGGACG+AGG | 0.463717 | 5_1:+58995826 | Msa0740170:CDS |
| CACCCTAGGTCCTCGCGGTA+TGG | 0.466201 | 5_1:+58987664 | Msa0740170:CDS |
| TTTGGATCGAGAAACTTCTT+GGG | 0.472807 | 5_1:-58991181 | None:intergenic |
| ATCAACTAAGATCTTGGCAG+CGG | 0.472906 | 5_1:-58987771 | None:intergenic |
| ACTATTACTTAATGTTGAGT+TGG | 0.473212 | 5_1:+58991207 | Msa0740170:CDS |
| TGTGTTACCTTTACAACTGC+AGG | 0.473533 | 5_1:-58994349 | None:intergenic |
| GAGAGATTCAACATCTTCAA+TGG | 0.474859 | 5_1:+58991901 | Msa0740170:CDS |
| ATTTGGAGAGGCTTAGAAGT+AGG | 0.478454 | 5_1:+58993332 | Msa0740170:CDS |
| TTCCCATAGATTACTACATA+AGG | 0.479151 | 5_1:-58996213 | None:intergenic |
| GCAAAGCCTTTCATTGAAGA+TGG | 0.481903 | 5_1:+58988855 | Msa0740170:CDS |
| GAACAACTTTGGCACCACTT+TGG | 0.482261 | 5_1:-58991450 | None:intergenic |
| AAAACTTATAGGCGGAGAAA+AGG | 0.483886 | 5_1:+58989133 | Msa0740170:CDS |
| GTGGCTATGTCGACCCCAAA+TGG | 0.487755 | 5_1:-58994286 | None:intergenic |
| TTCAACCATGTCTTCTATGC+TGG | 0.488113 | 5_1:+58987435 | Msa0740170:exon |
| AATCAATTGTTGATGCAGAA+TGG | 0.489441 | 5_1:+58991395 | Msa0740170:CDS |
| TGGAAATAAGCCGGTACCTA+AGG | 0.491090 | 5_1:+58992276 | Msa0740170:CDS |
| AGCATTGTCACATAATTGCC+GGG | 0.495335 | 5_1:-58993197 | None:intergenic |
| AACACGCGCTTCCTTCTGGT+TGG | 0.498660 | 5_1:+58993260 | Msa0740170:CDS |
| AAGAATTCAACTGTAGTTGC+TGG | 0.502547 | 5_1:+58992142 | Msa0740170:CDS |
| CTGGGAGCCTGCAGTTGTAA+AGG | 0.504005 | 5_1:+58994342 | Msa0740170:CDS |
| TCCGCGACCTCTGCCTCCCA+TGG | 0.505514 | 5_1:-58995800 | None:intergenic |
| AGAGGCTGCTGCAAGTGCCA+TGG | 0.507829 | 5_1:+58995783 | Msa0740170:CDS |
| TTTGGAGAGGCTTAGAAGTA+GGG | 0.508807 | 5_1:+58993333 | Msa0740170:CDS |
| GTCCATACCGCGAGGACCTA+GGG | 0.509242 | 5_1:-58987666 | None:intergenic |
| GAGGCTGCTGCAAGTGCCAT+GGG | 0.510487 | 5_1:+58995784 | Msa0740170:CDS |
| GCCATGGGAGGCAGAGGTCG+CGG | 0.511189 | 5_1:+58995799 | Msa0740170:CDS |
| TGTCCATACCGCGAGGACCT+AGG | 0.512184 | 5_1:-58987667 | None:intergenic |
| CTCCTATGCAAAAGCTCTTG+AGG | 0.514576 | 5_1:+58992343 | Msa0740170:CDS |
| GCAAGTGCCATGGGAGGCAG+AGG | 0.514740 | 5_1:+58995793 | Msa0740170:CDS |
| CAAAGTTGTTCTCTCACGCC+TGG | 0.517173 | 5_1:+58991462 | Msa0740170:CDS |
| TGGACGCTGTAATTGCAATT+GGG | 0.522784 | 5_1:+58989177 | Msa0740170:CDS |
| GTGCATGCTGCCTTAGGTAC+CGG | 0.523446 | 5_1:-58992286 | None:intergenic |
| TGCTATAAATGCTGCTACAG+AGG | 0.524498 | 5_1:+58994451 | Msa0740170:CDS |
| TGCAATCATGATTGTTAGAA+GGG | 0.525847 | 5_1:+58992114 | Msa0740170:CDS |
| ATGGTGGCTGTTTGGCCAGA+TGG | 0.526129 | 5_1:-58991928 | None:intergenic |
| TTATAGGAATGCATGCTCCT+TGG | 0.526307 | 5_1:+58988905 | Msa0740170:CDS |
| CGGCAATTATGTGACAATGC+TGG | 0.526950 | 5_1:+58993199 | Msa0740170:CDS |
| AAACATGATTGGAATAAAGA+AGG | 0.527009 | 5_1:+58989214 | Msa0740170:CDS |
| TTCTAAGCCTCTCCAAATGC+AGG | 0.527184 | 5_1:-58993327 | None:intergenic |
| GATGTTGATATGGTATGAAA+TGG | 0.530542 | 5_1:+58995982 | Msa0740170:three_prime_UTR |
| AAGAGTTGCTGCTGCAACTG+GGG | 0.532157 | 5_1:+58991704 | Msa0740170:CDS |
| TTGCCAGATCACCAATAGCC+AGG | 0.540140 | 5_1:-58991480 | None:intergenic |
| GGAGGTGGTTTCCGTGGCCG+TGG | 0.540350 | 5_1:+58995820 | Msa0740170:CDS |
| TGTTATTGCAGGTTATTCCC+CGG | 0.542735 | 5_1:+58993179 | Msa0740170:intron |
| AAAGAGTTGCTGCTGCAACT+GGG | 0.544621 | 5_1:+58991703 | Msa0740170:CDS |
| GTTGAAGACGGTGATGGAGG+AGG | 0.544625 | 5_1:-58987418 | None:intergenic |
| TTGATGTTGCTTACGAGTTG+AGG | 0.547025 | 5_1:-58987608 | None:intergenic |
| GAGCATCATCTGATCAAACT+AGG | 0.549384 | 5_1:+58996023 | Msa0740170:three_prime_UTR |
| CAGGCGTGAGAGAACAACTT+TGG | 0.550761 | 5_1:-58991461 | None:intergenic |
| GCATTCCTCGTCCACGGCCA+CGG | 0.551786 | 5_1:-58995831 | None:intergenic |
| AGCCTTATGTAGTAATCTAT+GGG | 0.556362 | 5_1:+58996211 | Msa0740170:three_prime_UTR |
| GGTTCGAACGACGTCGGCGA+CGG | 0.561806 | 5_1:-58987642 | None:intergenic |
| CAATGATCTTATATTCAACT+GGG | 0.564646 | 5_1:-58993372 | None:intergenic |
| TGCAGGCTCCCAGACAAAGT+TGG | 0.565410 | 5_1:-58994332 | None:intergenic |
| AGAGCTAGCAGTTAGCATTG+AGG | 0.570163 | 5_1:+58989049 | Msa0740170:CDS |
| TGTCAATAACATTATTGATG+AGG | 0.570369 | 5_1:+58991743 | Msa0740170:CDS |
| AGCACAGAAAATGTCTCTAT+CGG | 0.576037 | 5_1:-58991655 | None:intergenic |
| TCAACTAAGATCTTGGCAGC+GGG | 0.578759 | 5_1:-58987770 | None:intergenic |
| GGTATGAAATGGTAATATTG+GGG | 0.582148 | 5_1:+58995993 | Msa0740170:three_prime_UTR |
| GTTGTCAGATGGAAATAAGC+CGG | 0.584185 | 5_1:+58992267 | Msa0740170:intron |
| GACGTCGTTCGAACCACCCT+AGG | 0.584290 | 5_1:+58987650 | Msa0740170:CDS |
| TATTGGTGATCTGGCAACAC+AGG | 0.584988 | 5_1:+58991486 | Msa0740170:CDS |
| CAGATCATACTACTGAAAGA+AGG | 0.586463 | 5_1:+58987563 | Msa0740170:CDS |
| TCAACTGTAGTTGCTGGTGG+AGG | 0.588207 | 5_1:+58992148 | Msa0740170:CDS |
| TCTTTCAGTAGTATGATCTG+TGG | 0.588647 | 5_1:-58987560 | None:intergenic |
| TGAACACCATCTTCAATGAA+AGG | 0.598288 | 5_1:-58988861 | None:intergenic |
| TTTGGGGTCGACATAGCCAC+TGG | 0.598540 | 5_1:+58994289 | Msa0740170:CDS |
| GTGACTGTGAAGGTTGGCGA+TGG | 0.598622 | 5_1:+58988789 | Msa0740170:intron |
| ATGGTTGAAGACGGTGATGG+AGG | 0.605889 | 5_1:-58987421 | None:intergenic |
| AGGTGAGGGTGCTCCATTTG+GGG | 0.609656 | 5_1:+58994273 | Msa0740170:intron |
| GTCCGAGAGTGCACAAGGAG+AGG | 0.612084 | 5_1:+58995765 | Msa0740170:intron |
| GGTCGCGGAGGTGGTTTCCG+TGG | 0.612096 | 5_1:+58995814 | Msa0740170:CDS |
| AATTCAACTGTAGTTGCTGG+TGG | 0.612307 | 5_1:+58992145 | Msa0740170:CDS |
| ATGTAGTCCGAGAGTGCACA+AGG | 0.618575 | 5_1:+58995760 | Msa0740170:intron |
| CTTTCTTCAAAACTTATAGG+CGG | 0.620972 | 5_1:+58989125 | Msa0740170:CDS |
| TTTCATCCACACTTAAGACC+AGG | 0.622642 | 5_1:-58994481 | None:intergenic |
| AGCTTGCCTGGTCTTAAGTG+TGG | 0.623799 | 5_1:+58994475 | Msa0740170:CDS |
| ACAATTGATTGATACTGCGA+AGG | 0.626095 | 5_1:-58991382 | None:intergenic |
| GAAGGTACAGACACATCGCA+AGG | 0.628380 | 5_1:+58987581 | Msa0740170:CDS |
| ATCTACGCATTCCTCGTCCA+CGG | 0.629446 | 5_1:-58995837 | None:intergenic |
| ATGGGAGGCAGAGGTCGCGG+AGG | 0.629988 | 5_1:+58995802 | Msa0740170:CDS |
| ACGAAGGTCAACCAACCAGA+AGG | 0.630592 | 5_1:-58993271 | None:intergenic |
| GCTGCTGCAAGTGCCATGGG+AGG | 0.631802 | 5_1:+58995787 | Msa0740170:CDS |
| ACATATACCTGCATTTGGAG+AGG | 0.632506 | 5_1:+58993320 | Msa0740170:CDS |
| AGAGTTGCTGCTGCAACTGG+GGG | 0.633739 | 5_1:+58991705 | Msa0740170:CDS |
| ATAGAAGACATGGTTGAAGA+CGG | 0.635825 | 5_1:-58987430 | None:intergenic |
| GACATGGTTGAAGACGGTGA+TGG | 0.638234 | 5_1:-58987424 | None:intergenic |
| TGCTAAGTCTCAAGACTCTG+AGG | 0.641653 | 5_1:+58987796 | Msa0740170:CDS |
| ACACATATAACAGACCTGAT+CGG | 0.642521 | 5_1:-58991968 | None:intergenic |
| TACCAGAAACATACATCCAG+TGG | 0.644183 | 5_1:-58995927 | None:intergenic |
| TTATGTAGTAATCTATGGGA+AGG | 0.650704 | 5_1:+58996215 | Msa0740170:three_prime_UTR |
| GAGTCGCGCATGTTACCACC+AGG | 0.652404 | 5_1:-58991097 | None:intergenic |
| GCTTACCAGCATAGAAGACA+TGG | 0.652653 | 5_1:-58987440 | None:intergenic |
| TTTCTTCTACAGGTTCCTGG+TGG | 0.652923 | 5_1:+58991082 | Msa0740170:CDS |
| TCCACCACGGAGAACTATGG+TGG | 0.654944 | 5_1:-58991944 | None:intergenic |
| TGAATCAGCAATTCCACCAG+TGG | 0.658303 | 5_1:-58994305 | None:intergenic |
| GCCACCATAGTTCTCCGTGG+TGG | 0.660027 | 5_1:+58991943 | Msa0740170:CDS |
| GGGGTCGACATAGCCACTGG+TGG | 0.660282 | 5_1:+58994292 | Msa0740170:CDS |
| TGCAAGCAATACCACAGTGG+TGG | 0.660823 | 5_1:-58988814 | None:intergenic |
| TCTGTCACCATTTCTAACGA+CGG | 0.662631 | 5_1:+58987713 | Msa0740170:CDS |
| ATTTATATAGGCGATCGAGA+AGG | 0.663457 | 5_1:+58989022 | Msa0740170:intron |
| AAGGTACAGACACATCGCAA+GGG | 0.678150 | 5_1:+58987582 | Msa0740170:CDS |
| GCATTGTCACATAATTGCCG+GGG | 0.690605 | 5_1:-58993196 | None:intergenic |
| TGACAGAACCTTTATCATCG+TGG | 0.697727 | 5_1:-58987697 | None:intergenic |
| AGACCTGATCGGCTCCACCA+CGG | 0.698398 | 5_1:-58991957 | None:intergenic |
| CATACCGCGAGGACCTAGGG+TGG | 0.704746 | 5_1:-58987663 | None:intergenic |
| TAGGGTGGTTCGAACGACGT+CGG | 0.704807 | 5_1:-58987648 | None:intergenic |
| TTGGATAAATGTGTCCAAAG+TGG | 0.710450 | 5_1:+58991436 | Msa0740170:CDS |
| CAATTGTGCAAATAAAACGA+AGG | 0.722163 | 5_1:-58993287 | None:intergenic |
| CGAACCACCCTAGGTCCTCG+CGG | 0.746042 | 5_1:+58987659 | Msa0740170:CDS |
| ACAGCCACCATAGTTCTCCG+TGG | 0.750108 | 5_1:+58991940 | Msa0740170:CDS |
| ATGAGTTTGTCCATACCGCG+AGG | 0.761718 | 5_1:-58987674 | None:intergenic |
| AGCTGCAAGCAATACCACAG+TGG | 0.761934 | 5_1:-58988817 | None:intergenic |
| TGGCGATGGAACCACCACTG+TGG | 0.777137 | 5_1:+58988803 | Msa0740170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAATTAAACATATTTAAT+AGG | + | chr5_1:58992013-58992032 | Msa0740170:intron | 10.0% |
| !! | AATCATATATCTTTAAATTA+AGG | + | chr5_1:58992422-58992441 | Msa0740170:intron | 10.0% |
| !! | ATCATATATCTTTAAATTAA+GGG | + | chr5_1:58992423-58992442 | Msa0740170:intron | 10.0% |
| !!! | AAATGATAAAAAGTATATAT+TGG | - | chr5_1:58993082-58993101 | None:intergenic | 10.0% |
| !! | CCTATATAAATTATTATACA+CGG | - | chr5_1:58989013-58989032 | None:intergenic | 15.0% |
| !! | TCAATAGAAAAGAAATTATT+AGG | + | chr5_1:58989316-58989335 | Msa0740170:intron | 15.0% |
| !!! | ATTACATAGAATTTTATATC+TGG | + | chr5_1:58989627-58989646 | Msa0740170:intron | 15.0% |
| !!! | TATTTTTTTTACATATTTGC+AGG | - | chr5_1:58990265-58990284 | None:intergenic | 15.0% |
| !! | CAAATATGTAAAAAAAATAC+TGG | + | chr5_1:58990266-58990285 | Msa0740170:intron | 15.0% |
| !!! | TCATATATGTTTTTGTTTTA+TGG | + | chr5_1:58990975-58990994 | Msa0740170:intron | 15.0% |
| !!! | ACATTAAGTAATAGTATTTT+TGG | - | chr5_1:58991202-58991221 | None:intergenic | 15.0% |
| !! | GAATATTATTTATGACAAAT+TGG | + | chr5_1:58991417-58991436 | Msa0740170:CDS | 15.0% |
| !!! | AAGTTTTTGTAAACTAAATA+TGG | + | chr5_1:58992367-58992386 | Msa0740170:intron | 15.0% |
| !! | GACTAAAATAATAGAAAATT+AGG | - | chr5_1:58992522-58992541 | None:intergenic | 15.0% |
| !! | AGTCATATATCTTTAAATTA+AGG | + | chr5_1:58992538-58992557 | Msa0740170:intron | 15.0% |
| !! | GTCATATATCTTTAAATTAA+GGG | + | chr5_1:58992539-58992558 | Msa0740170:intron | 15.0% |
| !!! | CATTATATGCAATTAATTTT+GGG | - | chr5_1:58992982-58993001 | None:intergenic | 15.0% |
| !! | AATTATGTAATAAAACAGTT+TGG | - | chr5_1:58993939-58993958 | None:intergenic | 15.0% |
| !! | TACATTATTGTATAACAATA+TGG | - | chr5_1:58994003-58994022 | None:intergenic | 15.0% |
| !!! | TTTATTTTATAGAAGGAATA+AGG | - | chr5_1:58995043-58995062 | None:intergenic | 15.0% |
| !!! | GAACTTTTTTATTTTATAGA+AGG | - | chr5_1:58995050-58995069 | None:intergenic | 15.0% |
| !! | ATAATCAAATAAAGTCTTAA+TGG | - | chr5_1:58995326-58995345 | None:intergenic | 15.0% |
| !! | ATTAATTGTTGCATAATTAA+TGG | + | chr5_1:58995391-58995410 | Msa0740170:intron | 15.0% |
| !! | TTAATTGTTGCATAATTAAT+GGG | + | chr5_1:58995392-58995411 | Msa0740170:intron | 15.0% |
| !! | GATTTAATGTACATAAAAAA+TGG | - | chr5_1:58995546-58995565 | None:intergenic | 15.0% |
| !!! | AAAACTATTTACATTTTTGT+GGG | - | chr5_1:58995637-58995656 | None:intergenic | 15.0% |
| !!! | AAAAACTATTTACATTTTTG+TGG | - | chr5_1:58995638-58995657 | None:intergenic | 15.0% |
| !!! | TATTTGTTAATTTTATACGT+TGG | + | chr5_1:58996083-58996102 | Msa0740170:three_prime_UTR | 15.0% |
| !! | AAAAAAATCAGAAATGAGTT+AGG | - | chr5_1:58987513-58987532 | None:intergenic | 20.0% |
| !!! | TCTGATTTTTTTTGAAAATG+CGG | + | chr5_1:58987521-58987540 | Msa0740170:intron | 20.0% |
| !!! | GTTAAGATTTTTTGGAATTA+AGG | + | chr5_1:58987991-58988010 | Msa0740170:intron | 20.0% |
| !! | CAACTTAAATAAGAACTTAT+AGG | + | chr5_1:58988031-58988050 | Msa0740170:intron | 20.0% |
| !! | TACATAAACACTAATATGAT+AGG | - | chr5_1:58988064-58988083 | None:intergenic | 20.0% |
| !! | TTCACTCTCAAAATTTAATA+CGG | + | chr5_1:58988880-58988899 | Msa0740170:CDS | 20.0% |
| !! | AAAATTTAATACGGAGTTAT+AGG | + | chr5_1:58988889-58988908 | Msa0740170:CDS | 20.0% |
| !! | CCGTGTATAATAATTTATAT+AGG | + | chr5_1:58989010-58989029 | Msa0740170:intron | 20.0% |
| !!! | GAACTAATGTGTTTTATAAT+TGG | + | chr5_1:58989536-58989555 | Msa0740170:intron | 20.0% |
| !! | TTATTAGAATGGTGATTATA+TGG | - | chr5_1:58989844-58989863 | None:intergenic | 20.0% |
| !! | TGATTAAAATGTTAGGAAAT+GGG | - | chr5_1:58990019-58990038 | None:intergenic | 20.0% |
| !! | TTGATTAAAATGTTAGGAAA+TGG | - | chr5_1:58990020-58990039 | None:intergenic | 20.0% |
| !! | TGAAACTTGATTAAAATGTT+AGG | - | chr5_1:58990026-58990045 | None:intergenic | 20.0% |
| !! | GATTGTTCATAAAATGTAAT+AGG | + | chr5_1:58990288-58990307 | Msa0740170:intron | 20.0% |
| !! | AAACTTCTTTCTTTATTCTT+AGG | - | chr5_1:58990418-58990437 | None:intergenic | 20.0% |
| !!! | TAAGCAATTTAGTTTTCTTT+AGG | + | chr5_1:58991018-58991037 | Msa0740170:intron | 20.0% |
| !!! | AACAAACGAATTTGAAATAT+TGG | - | chr5_1:58991270-58991289 | None:intergenic | 20.0% |
| !! | AAACTACTAATTAATATACG+TGG | - | chr5_1:58991603-58991622 | None:intergenic | 20.0% |
| !!! | TTTTTTACTTATTTGCTTGA+AGG | + | chr5_1:58991834-58991853 | Msa0740170:intron | 20.0% |
| !! | GACTGTTAAATATTAAAATG+TGG | + | chr5_1:58992231-58992250 | Msa0740170:intron | 20.0% |
| !!! | AAGTTTTTGTTAACTAGATA+TGG | + | chr5_1:58992477-58992496 | Msa0740170:intron | 20.0% |
| !! | AGAATGATTGAAAATTTGAT+TGG | - | chr5_1:58992649-58992668 | None:intergenic | 20.0% |
| !!! | AATCATTCTAGAAAATTTTC+AGG | + | chr5_1:58992660-58992679 | Msa0740170:intron | 20.0% |
| !! | AATAATGCAATAATAAAGCA+TGG | - | chr5_1:58992888-58992907 | None:intergenic | 20.0% |
| !! | CTTTATTATTGCATTATTGT+GGG | + | chr5_1:58992890-58992909 | Msa0740170:intron | 20.0% |
| !! | GAAAATTTCATACACAAAAA+GGG | - | chr5_1:58992945-58992964 | None:intergenic | 20.0% |
| !! | AGAAAATTTCATACACAAAA+AGG | - | chr5_1:58992946-58992965 | None:intergenic | 20.0% |
| !!! | GCATTATATGCAATTAATTT+TGG | - | chr5_1:58992983-58993002 | None:intergenic | 20.0% |
| !!! | ATTTTTGAAATCACTATTTC+AGG | + | chr5_1:58993098-58993117 | Msa0740170:intron | 20.0% |
| !! | ACTTATTAAAACAAGTTATG+TGG | - | chr5_1:58993561-58993580 | None:intergenic | 20.0% |
| !! | AAATTAAATAACTCACGAAT+AGG | + | chr5_1:58993589-58993608 | Msa0740170:intron | 20.0% |
| !!! | GATAAATTTTTCTATGATGA+TGG | - | chr5_1:58993890-58993909 | None:intergenic | 20.0% |
| !! | ATCATAGAAAAATTTATCGA+AGG | + | chr5_1:58993892-58993911 | Msa0740170:intron | 20.0% |
| !! | TCATAGAAAAATTTATCGAA+GGG | + | chr5_1:58993893-58993912 | Msa0740170:intron | 20.0% |
| !! | TGTTATACAATAATGTAATC+AGG | + | chr5_1:58994006-58994025 | Msa0740170:intron | 20.0% |
| !! | TAAATATAAACTGATAGAGA+TGG | - | chr5_1:58994536-58994555 | None:intergenic | 20.0% |
| !!! | AAAGGATTTTTTCTACTTTA+AGG | + | chr5_1:58994649-58994668 | Msa0740170:intron | 20.0% |
| !!! | AAGGATTTTTTCTACTTTAA+GGG | + | chr5_1:58994650-58994669 | Msa0740170:intron | 20.0% |
| !!! | TAGTATATAACTTTTACCTT+TGG | + | chr5_1:58994678-58994697 | Msa0740170:intron | 20.0% |
| !!! | ATCAAATGCTTATTTGTTTT+GGG | + | chr5_1:58994890-58994909 | Msa0740170:intron | 20.0% |
| !! | AATTCATTTATCTTGACTAA+GGG | - | chr5_1:58995072-58995091 | None:intergenic | 20.0% |
| !! | TAATTCATTTATCTTGACTA+AGG | - | chr5_1:58995073-58995092 | None:intergenic | 20.0% |
| !! | TTTCTCATTAAAATCAATGA+AGG | - | chr5_1:58995292-58995311 | None:intergenic | 20.0% |
| !! | TAATTATGCAACAATTAATC+AGG | - | chr5_1:58995390-58995409 | None:intergenic | 20.0% |
| !! | AAATATCATAATCCTAGAAT+AGG | - | chr5_1:58995674-58995693 | None:intergenic | 20.0% |
| !! | TATCTAAATACTTAGTGTTA+AGG | - | chr5_1:58996172-58996191 | None:intergenic | 20.0% |
| !!! | TTTTTTTGAAAATGCGGTTA+TGG | + | chr5_1:58987527-58987546 | Msa0740170:intron | 25.0% |
| ! | TTGTATTTGTTTCATTCAGA+TGG | + | chr5_1:58987969-58987988 | Msa0740170:intron | 25.0% |
| !!! | TTCAGATGGTTAAGATTTTT+TGG | + | chr5_1:58987983-58988002 | Msa0740170:intron | 25.0% |
| !!! | AACACAAACTTTTTTGTGTA+AGG | + | chr5_1:58988115-58988134 | Msa0740170:intron | 25.0% |
| ! | TTATTTCCATAAGTTCTCTA+GGG | - | chr5_1:58988163-58988182 | None:intergenic | 25.0% |
| ! | CATTCTATAGCAAAAGATTA+AGG | + | chr5_1:58988269-58988288 | Msa0740170:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr5_1:58988295-58988314 | None:intergenic | 25.0% |
| ! | TTATTTGCATAAGTTCTCTA+GGG | - | chr5_1:58988610-58988629 | None:intergenic | 25.0% |
| ! | ACACTTTCTTCAAAACTTAT+AGG | + | chr5_1:58989122-58989141 | Msa0740170:CDS | 25.0% |
| ! | AAACATGATTGGAATAAAGA+AGG | + | chr5_1:58989214-58989233 | Msa0740170:CDS | 25.0% |
| ! | AAAAGAGATAATGTACCAAA+TGG | - | chr5_1:58989272-58989291 | None:intergenic | 25.0% |
| !! | TTGGTACATTATCTCTTTTA+TGG | + | chr5_1:58989273-58989292 | Msa0740170:intron | 25.0% |
| !!! | TTAGAATTTTGAGTTCACTT+TGG | + | chr5_1:58989565-58989584 | Msa0740170:intron | 25.0% |
| ! | TTGTGAAACAAAACATTTGA+TGG | + | chr5_1:58989693-58989712 | Msa0740170:intron | 25.0% |
| ! | TTGATTAAAATGATATCCAC+TGG | - | chr5_1:58989772-58989791 | None:intergenic | 25.0% |
| !!! | CATTTGAAGATTTTTAAAGC+CGG | + | chr5_1:58989801-58989820 | Msa0740170:intron | 25.0% |
| ! | TGCAAAAATAGTAACTGTTT+GGG | - | chr5_1:58989961-58989980 | None:intergenic | 25.0% |
| !! | GATACATTTCAATTGATAGT+AGG | + | chr5_1:58990209-58990228 | Msa0740170:intron | 25.0% |
| ! | CATAAAATGTAATAGGAAGT+TGG | + | chr5_1:58990295-58990314 | Msa0740170:intron | 25.0% |
| ! | AATTAGATAACTGTAAGCTA+CGG | + | chr5_1:58990521-58990540 | Msa0740170:intron | 25.0% |
| ! | AATTAACAAGTAAAATGGCA+AGG | - | chr5_1:58990663-58990682 | None:intergenic | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | + | chr5_1:58990831-58990850 | Msa0740170:intron | 25.0% |
| ! | ATATGAAAATGTCTTCTTGA+AGG | - | chr5_1:58991143-58991162 | None:intergenic | 25.0% |
| ! | ACTATTACTTAATGTTGAGT+TGG | + | chr5_1:58991207-58991226 | Msa0740170:CDS | 25.0% |
| ! | AACTAAAACTTGATCTAATG+AGG | - | chr5_1:58991539-58991558 | None:intergenic | 25.0% |
| ! | TGTCAATAACATTATTGATG+AGG | + | chr5_1:58991743-58991762 | Msa0740170:CDS | 25.0% |
| !!! | TATTTTTTCACAGTTCATAG+AGG | + | chr5_1:58992069-58992088 | Msa0740170:intron | 25.0% |
| !!! | AATTTTGTTGTGCATTTCAT+TGG | + | chr5_1:58992197-58992216 | Msa0740170:intron | 25.0% |
| ! | CATTTCATTGGATTATGATA+GGG | + | chr5_1:58992209-58992228 | Msa0740170:intron | 25.0% |
| ! | AATATTAAAATGTGGTTACG+TGG | + | chr5_1:58992239-58992258 | Msa0740170:intron | 25.0% |
| ! | AAACTAAATATGGTCTATAG+TGG | + | chr5_1:58992377-58992396 | Msa0740170:intron | 25.0% |
| !!! | AAAATTTTCAGGTTTCCAAT+AGG | + | chr5_1:58992671-58992690 | Msa0740170:intron | 25.0% |
| !!! | TCCAATAGGTTTTTTAATCT+TGG | + | chr5_1:58992685-58992704 | Msa0740170:intron | 25.0% |
| ! | ACCAAGATTAAAAAACCTAT+TGG | - | chr5_1:58992689-58992708 | None:intergenic | 25.0% |
| !! | GCTTTATTATTGCATTATTG+TGG | + | chr5_1:58992889-58992908 | Msa0740170:intron | 25.0% |
| !! | CAAATTTAATGTGTTATTGC+AGG | + | chr5_1:58993168-58993187 | Msa0740170:intron | 25.0% |
| ! | CAATGATCTTATATTCAACT+GGG | - | chr5_1:58993375-58993394 | None:intergenic | 25.0% |
| ! | TTAAAACAATTTGCATGAAC+AGG | + | chr5_1:58993755-58993774 | Msa0740170:intron | 25.0% |
| !! | AGTTAATACATTCTGAAAGT+GGG | - | chr5_1:58993791-58993810 | None:intergenic | 25.0% |
| !! | TAGTTAATACATTCTGAAAG+TGG | - | chr5_1:58993792-58993811 | None:intergenic | 25.0% |
| ! | TCAAGAGGAAATAAATAAAG+TGG | - | chr5_1:58993854-58993873 | None:intergenic | 25.0% |
| ! | TGAAACAGTTAAAAATCCTA+AGG | + | chr5_1:58994499-58994518 | Msa0740170:CDS | 25.0% |
| !!! | TGTTTTGGTTAATATTTCCT+AGG | + | chr5_1:58994572-58994591 | Msa0740170:intron | 25.0% |
| !!! | GTTTTGGTTAATATTTCCTA+GGG | + | chr5_1:58994573-58994592 | Msa0740170:intron | 25.0% |
| !! | TGACACATTTCTTTTTGTAA+AGG | + | chr5_1:58994631-58994650 | Msa0740170:intron | 25.0% |
| !!! | AGGATTTTTTCTACTTTAAG+GGG | + | chr5_1:58994651-58994670 | Msa0740170:intron | 25.0% |
| ! | CTGAGTAAAAGAAATTTGTA+TGG | - | chr5_1:58994845-58994864 | None:intergenic | 25.0% |
| ! | CAAAACAAATAAGCATTTGA+TGG | - | chr5_1:58994891-58994910 | None:intergenic | 25.0% |
| !! | CATCAAATGCTTATTTGTTT+TGG | + | chr5_1:58994889-58994908 | Msa0740170:intron | 25.0% |
| !!! | TCAAATGCTTATTTGTTTTG+GGG | + | chr5_1:58994891-58994910 | Msa0740170:intron | 25.0% |
| !! | GAAAAATTTCATTCTGGAAA+TGG | - | chr5_1:58995005-58995024 | None:intergenic | 25.0% |
| !!! | TACATTGATTTACAGAATTG+TGG | + | chr5_1:58995497-58995516 | Msa0740170:intron | 25.0% |
| ! | TTTCACTAATATGAAGAAGT+AGG | + | chr5_1:58995692-58995711 | Msa0740170:intron | 25.0% |
| ! | TGATTAGAAATGTGTTCTAA+TGG | + | chr5_1:58995859-58995878 | Msa0740170:exon | 25.0% |
| ! | GATTAGAAATGTGTTCTAAT+GGG | + | chr5_1:58995860-58995879 | Msa0740170:exon | 25.0% |
| ! | TTTATCTACAGATGTTGATA+TGG | + | chr5_1:58995972-58995991 | Msa0740170:three_prime_UTR | 25.0% |
| ! | ATGGTATGAAATGGTAATAT+TGG | + | chr5_1:58995991-58996010 | Msa0740170:three_prime_UTR | 25.0% |
| ! | TGGTATGAAATGGTAATATT+GGG | + | chr5_1:58995992-58996011 | Msa0740170:three_prime_UTR | 25.0% |
| !! | TTGTTAATTTTATACGTTGG+AGG | + | chr5_1:58996086-58996105 | Msa0740170:three_prime_UTR | 25.0% |
| !! | TGTTAATTTTATACGTTGGA+GGG | + | chr5_1:58996087-58996106 | Msa0740170:three_prime_UTR | 25.0% |
| AGCAATATCAACTAAGATCT+TGG | - | chr5_1:58987780-58987799 | None:intergenic | 30.0% | |
| TTTCTGCAAAATGATGAGAT+CGG | - | chr5_1:58987852-58987871 | None:intergenic | 30.0% | |
| ATATTACTCTCTGCTTAGAT+CGG | + | chr5_1:58987914-58987933 | Msa0740170:intron | 30.0% | |
| CTTATTTCCATAAGTTCTCT+AGG | - | chr5_1:58988164-58988183 | None:intergenic | 30.0% | |
| TTATTTGTAGCTTATAGCAC+AGG | + | chr5_1:58988310-58988329 | Msa0740170:intron | 30.0% | |
| ! | TACGTTTTGTGACATTGTTT+TGG | - | chr5_1:58988499-58988518 | None:intergenic | 30.0% |
| AAAACAATGTCACAAAACGT+AGG | + | chr5_1:58988498-58988517 | Msa0740170:intron | 30.0% | |
| TCAAATAAGCCAATTCAAAC+AGG | + | chr5_1:58988534-58988553 | Msa0740170:intron | 30.0% | |
| ! | CGTAAAAGTTCAAGTTTACT+TGG | - | chr5_1:58988561-58988580 | None:intergenic | 30.0% |
| CTTATTTGCATAAGTTCTCT+AGG | - | chr5_1:58988611-58988630 | None:intergenic | 30.0% | |
| GCTAAAATGAGTGTATCTAT+TGG | - | chr5_1:58988705-58988724 | None:intergenic | 30.0% | |
| CACTTAGAGCTTAACTAAAT+TGG | - | chr5_1:58988727-58988746 | None:intergenic | 30.0% | |
| CTTTCTTCAAAACTTATAGG+CGG | + | chr5_1:58989125-58989144 | Msa0740170:CDS | 30.0% | |
| AAAGGAATTCTTTGCATCTA+TGG | + | chr5_1:58989151-58989170 | Msa0740170:CDS | 30.0% | |
| GATGATAGGTTAAACATGAT+TGG | + | chr5_1:58989203-58989222 | Msa0740170:CDS | 30.0% | |
| ! | TTTACAACCTTTTCTCCATT+TGG | + | chr5_1:58989254-58989273 | Msa0740170:intron | 30.0% |
| TAATGTACCAAATGGAGAAA+AGG | - | chr5_1:58989264-58989283 | None:intergenic | 30.0% | |
| ! | GTACATTATCTCTTTTATGG+TGG | + | chr5_1:58989276-58989295 | Msa0740170:intron | 30.0% |
| ACACATTTATGCAAAGTGAT+TGG | - | chr5_1:58989425-58989444 | None:intergenic | 30.0% | |
| AAAATGATATCCACTGGAAT+AGG | - | chr5_1:58989766-58989785 | None:intergenic | 30.0% | |
| ACTGTTTGGGAAATTAATTG+AGG | - | chr5_1:58989948-58989967 | None:intergenic | 30.0% | |
| CTGCAAAAATAGTAACTGTT+TGG | - | chr5_1:58989962-58989981 | None:intergenic | 30.0% | |
| AAACTAGGTAACCTTTATTG+AGG | - | chr5_1:58990130-58990149 | None:intergenic | 30.0% | |
| GGTGGAATTAACAAGTAAAA+TGG | - | chr5_1:58990668-58990687 | None:intergenic | 30.0% | |
| TTTGAACTGTATCACTAACT+AGG | + | chr5_1:58990931-58990950 | Msa0740170:intron | 30.0% | |
| ! | TAGTGCTGTTATAATGATTC+AGG | + | chr5_1:58991058-58991077 | Msa0740170:intron | 30.0% |
| ! | AAGAAGACATTTTCATATGC+TGG | + | chr5_1:58991145-58991164 | Msa0740170:CDS | 30.0% |
| AGAAAGAAAATGCCGAAATA+AGG | + | chr5_1:58991242-58991261 | Msa0740170:CDS | 30.0% | |
| ! | GAAATATTGGCACCTTATTT+CGG | - | chr5_1:58991257-58991276 | None:intergenic | 30.0% |
| !!! | TTTTGTGTTCGTTGATTTTG+AGG | + | chr5_1:58991288-58991307 | Msa0740170:intron | 30.0% |
| AGAACACAAGAAATAAGAGA+AGG | - | chr5_1:58991346-58991365 | None:intergenic | 30.0% | |
| AATCAATTGTTGATGCAGAA+TGG | + | chr5_1:58991395-58991414 | Msa0740170:CDS | 30.0% | |
| ATGAGGTTGTGTATTATTAG+TGG | + | chr5_1:58991760-58991779 | Msa0740170:intron | 30.0% | |
| TGAGGTTGTGTATTATTAGT+GGG | + | chr5_1:58991761-58991780 | Msa0740170:intron | 30.0% | |
| !! | ATTTTTGAGGAAAAGCAAGT+AGG | + | chr5_1:58991874-58991893 | Msa0740170:CDS | 30.0% |
| TTTAATAGGATCTGCCATTA+TGG | + | chr5_1:58992027-58992046 | Msa0740170:intron | 30.0% | |
| TTAATAGGATCTGCCATTAT+GGG | + | chr5_1:58992028-58992047 | Msa0740170:intron | 30.0% | |
| ACTTAAATATCTGCCCATAA+TGG | - | chr5_1:58992044-58992063 | None:intergenic | 30.0% | |
| ATGCAATCATGATTGTTAGA+AGG | + | chr5_1:58992113-58992132 | Msa0740170:CDS | 30.0% | |
| TGCAATCATGATTGTTAGAA+GGG | + | chr5_1:58992114-58992133 | Msa0740170:CDS | 30.0% | |
| GCATTTCATTGGATTATGAT+AGG | + | chr5_1:58992208-58992227 | Msa0740170:intron | 30.0% | |
| TAACTAGATATGGTCTATAG+TGG | + | chr5_1:58992487-58992506 | Msa0740170:intron | 30.0% | |
| !! | ATATTTTGGATAGCAGACAA+CGG | - | chr5_1:58992769-58992788 | None:intergenic | 30.0% |
| ! | TGCTATTTGACAAGATTGAT+GGG | - | chr5_1:58992793-58992812 | None:intergenic | 30.0% |
| !! | TTGCTATTTGACAAGATTGA+TGG | - | chr5_1:58992794-58992813 | None:intergenic | 30.0% |
| ! | AAGCATGGTATTTTCAATTG+CGG | - | chr5_1:58992873-58992892 | None:intergenic | 30.0% |
| TATTATTGCATTATTGTGGG+AGG | + | chr5_1:58992893-58992912 | Msa0740170:intron | 30.0% | |
| AGAGAATGTTCAAAATCACA+AGG | - | chr5_1:58993005-58993024 | None:intergenic | 30.0% | |
| CAATTGTGCAAATAAAACGA+AGG | - | chr5_1:58993290-58993309 | None:intergenic | 30.0% | |
| TTACTACATATACCTGCATT+TGG | + | chr5_1:58993315-58993334 | Msa0740170:CDS | 30.0% | |
| CCAATGATCTTATATTCAAC+TGG | - | chr5_1:58993376-58993395 | None:intergenic | 30.0% | |
| CCAGTTGAATATAAGATCAT+TGG | + | chr5_1:58993373-58993392 | Msa0740170:CDS | 30.0% | |
| AATTGAATACAAGTTCAAGC+CGG | + | chr5_1:58993404-58993423 | Msa0740170:intron | 30.0% | |
| CTTTAACATATTATGACCTC+CGG | - | chr5_1:58993426-58993445 | None:intergenic | 30.0% | |
| ATGCTTAGAAATTAGATTCG+TGG | + | chr5_1:58993686-58993705 | Msa0740170:intron | 30.0% | |
| AGAAATTAGATTCGTGGATT+TGG | + | chr5_1:58993692-58993711 | Msa0740170:intron | 30.0% | |
| TCCAATCAACATATACTTGA+TGG | - | chr5_1:58993827-58993846 | None:intergenic | 30.0% | |
| AAGGGTTTGAATGAACTAAA+TGG | - | chr5_1:58993967-58993986 | None:intergenic | 30.0% | |
| AATGCATTTACAGATATGTC+AGG | - | chr5_1:58994176-58994195 | None:intergenic | 30.0% | |
| TCCAATTCTAATGTTCTATG+TGG | + | chr5_1:58994392-58994411 | Msa0740170:intron | 30.0% | |
| TCCACATAGAACATTAGAAT+TGG | - | chr5_1:58994396-58994415 | None:intergenic | 30.0% | |
| ATTCTAATGTTCTATGTGGA+TGG | + | chr5_1:58994396-58994415 | Msa0740170:intron | 30.0% | |
| ! | CAAAACAAAAGTGCAATCAT+CGG | - | chr5_1:58994559-58994578 | None:intergenic | 30.0% |
| ATGAAATTTCAACATACCCT+AGG | - | chr5_1:58994592-58994611 | None:intergenic | 30.0% | |
| CAAAAAGAAATGTGTCAAAC+AGG | - | chr5_1:58994628-58994647 | None:intergenic | 30.0% | |
| !!! | GGATTTTTTCTACTTTAAGG+GGG | + | chr5_1:58994652-58994671 | Msa0740170:intron | 30.0% |
| ACAATGCTTAAAAGACAACA+AGG | - | chr5_1:58994772-58994791 | None:intergenic | 30.0% | |
| ! | GATTAGTTCCTTAATTCATG+CGG | + | chr5_1:58994921-58994940 | Msa0740170:intron | 30.0% |
| GACGATGAAAAATTTCATTC+TGG | - | chr5_1:58995011-58995030 | None:intergenic | 30.0% | |
| AGAAGGAATAAGGTCAAATT+GGG | - | chr5_1:58995033-58995052 | None:intergenic | 30.0% | |
| TAGAAGGAATAAGGTCAAAT+TGG | - | chr5_1:58995034-58995053 | None:intergenic | 30.0% | |
| AGTATCAGATACACAATTCT+TGG | - | chr5_1:58995186-58995205 | None:intergenic | 30.0% | |
| CGCTAATATCAAAGCAAATT+GGG | - | chr5_1:58995210-58995229 | None:intergenic | 30.0% | |
| CATCATTTGTACAATGTACA+TGG | - | chr5_1:58995352-58995371 | None:intergenic | 30.0% | |
| ATTCTTGCGATGATTTAAGT+TGG | + | chr5_1:58995449-58995468 | Msa0740170:intron | 30.0% | |
| ! | TTCTTGCGATGATTTAAGTT+GGG | + | chr5_1:58995450-58995469 | Msa0740170:intron | 30.0% |
| AAGTTCAAAAGTCACATTGA+GGG | - | chr5_1:58995477-58995496 | None:intergenic | 30.0% | |
| AAAGTTCAAAAGTCACATTG+AGG | - | chr5_1:58995478-58995497 | None:intergenic | 30.0% | |
| !! | TTCTCTAAGCTTGTTAGTTA+TGG | + | chr5_1:58995582-58995601 | Msa0740170:intron | 30.0% |
| GAAGAAGTAGGAAACATTTA+TGG | + | chr5_1:58995704-58995723 | Msa0740170:intron | 30.0% | |
| GATGTTGATATGGTATGAAA+TGG | + | chr5_1:58995982-58996001 | Msa0740170:three_prime_UTR | 30.0% | |
| GGTATGAAATGGTAATATTG+GGG | + | chr5_1:58995993-58996012 | Msa0740170:three_prime_UTR | 30.0% | |
| ! | GTTAATTTTATACGTTGGAG+GGG | + | chr5_1:58996088-58996107 | Msa0740170:three_prime_UTR | 30.0% |
| TTTATTAGATGGCTGTTGTT+TGG | + | chr5_1:58996116-58996135 | Msa0740170:three_prime_UTR | 30.0% | |
| ! | TTATTAGATGGCTGTTGTTT+GGG | + | chr5_1:58996117-58996136 | Msa0740170:three_prime_UTR | 30.0% |
| !! | TAGCCTTATGTAGTAATCTA+TGG | + | chr5_1:58996210-58996229 | Msa0740170:three_prime_UTR | 30.0% |
| ! | AGCCTTATGTAGTAATCTAT+GGG | + | chr5_1:58996211-58996230 | Msa0740170:three_prime_UTR | 30.0% |
| TTCCCATAGATTACTACATA+AGG | - | chr5_1:58996216-58996235 | None:intergenic | 30.0% | |
| TTATGTAGTAATCTATGGGA+AGG | + | chr5_1:58996215-58996234 | Msa0740170:three_prime_UTR | 30.0% | |
| TTCTCACACTGCAAAAAAGA+AGG | + | chr5_1:58987334-58987353 | Msa0740170:five_prime_UTR | 35.0% | |
| !!! | TTTTTTCGAGTACCAGTTTC+TGG | - | chr5_1:58987362-58987381 | None:intergenic | 35.0% |
| AGGAAGAGAGAGAGTTATTA+GGG | - | chr5_1:58987401-58987420 | None:intergenic | 35.0% | |
| ATAGAAGACATGGTTGAAGA+CGG | - | chr5_1:58987433-58987452 | None:intergenic | 35.0% | |
| TCTTTCAGTAGTATGATCTG+TGG | - | chr5_1:58987563-58987582 | None:intergenic | 35.0% | |
| CAGATCATACTACTGAAAGA+AGG | + | chr5_1:58987563-58987582 | Msa0740170:CDS | 35.0% | |
| AAACTCATCCACGATGATAA+AGG | + | chr5_1:58987689-58987708 | Msa0740170:CDS | 35.0% | |
| ! | TGGAATTAAGGACGTGTTTT+TGG | + | chr5_1:58988003-58988022 | Msa0740170:intron | 35.0% |
| GAGAACTTATGGAAATAAGC+TGG | + | chr5_1:58988165-58988184 | Msa0740170:intron | 35.0% | |
| TTACTTGGACCTGTTTGAAT+TGG | - | chr5_1:58988546-58988565 | None:intergenic | 35.0% | |
| !! | ATTGTTGTTTGTGACTGTGA+AGG | + | chr5_1:58988779-58988798 | Msa0740170:intron | 35.0% |
| TGAACACCATCTTCAATGAA+AGG | - | chr5_1:58988864-58988883 | None:intergenic | 35.0% | |
| TGAGATATAAGTACGTACCA+AGG | - | chr5_1:58988925-58988944 | None:intergenic | 35.0% | |
| CAGAAACATAACTTCACTCA+TGG | - | chr5_1:58988979-58988998 | None:intergenic | 35.0% | |
| ATTTATATAGGCGATCGAGA+AGG | + | chr5_1:58989022-58989041 | Msa0740170:intron | 35.0% | |
| ! | TAGCATTGAGGGAAAAAGTT+TGG | + | chr5_1:58989061-58989080 | Msa0740170:CDS | 35.0% |
| ! | GAAGAGAAGAAAAGTTTGCT+TGG | + | chr5_1:58989083-58989102 | Msa0740170:CDS | 35.0% |
| AAAACTTATAGGCGGAGAAA+AGG | + | chr5_1:58989133-58989152 | Msa0740170:CDS | 35.0% | |
| ATTCTTTGCATCTATGGTTG+TGG | + | chr5_1:58989157-58989176 | Msa0740170:CDS | 35.0% | |
| TAGGAAAATGTGTGCAAAAG+AGG | + | chr5_1:58989335-58989354 | Msa0740170:intron | 35.0% | |
| AAAATGTGTGCAAAAGAGGA+AGG | + | chr5_1:58989339-58989358 | Msa0740170:intron | 35.0% | |
| ! | GATTTCTTTTCCTATTCCAG+TGG | + | chr5_1:58989753-58989772 | Msa0740170:intron | 35.0% |
| CGAGTGGCAATTTATTAGAA+TGG | - | chr5_1:58989855-58989874 | None:intergenic | 35.0% | |
| TGTTGTCAACATCGAGAAAT+GGG | - | chr5_1:58989903-58989922 | None:intergenic | 35.0% | |
| ATGTTGTCAACATCGAGAAA+TGG | - | chr5_1:58989904-58989923 | None:intergenic | 35.0% | |
| TTTGCAGTTCTCCAAATATG+TGG | + | chr5_1:58989975-58989994 | Msa0740170:intron | 35.0% | |
| AGTAACAGCAACCACATATT+TGG | - | chr5_1:58989989-58990008 | None:intergenic | 35.0% | |
| TAGGTAACCTTTATTGAGGA+GGG | - | chr5_1:58990126-58990145 | None:intergenic | 35.0% | |
| TGCAATGCAACATGAAAACT+AGG | - | chr5_1:58990145-58990164 | None:intergenic | 35.0% | |
| TTTACCCATAGATTCGTAAG+TGG | + | chr5_1:58990187-58990206 | Msa0740170:intron | 35.0% | |
| GTATCCACTTACGAATCTAT+GGG | - | chr5_1:58990194-58990213 | None:intergenic | 35.0% | |
| TGTATCCACTTACGAATCTA+TGG | - | chr5_1:58990195-58990214 | None:intergenic | 35.0% | |
| TGATGCACAAGATATTGTAC+AGG | + | chr5_1:58990338-58990357 | Msa0740170:intron | 35.0% | |
| GATGCACAAGATATTGTACA+GGG | + | chr5_1:58990339-58990358 | Msa0740170:intron | 35.0% | |
| AAATCCAACCCCTTATTCAT+GGG | - | chr5_1:58990480-58990499 | None:intergenic | 35.0% | |
| AAAATCCAACCCCTTATTCA+TGG | - | chr5_1:58990481-58990500 | None:intergenic | 35.0% | |
| !! | AAACAAATGGTGGGTCAATT+GGG | - | chr5_1:58990763-58990782 | None:intergenic | 35.0% |
| CATAGGTTCAAACAAATGGT+GGG | - | chr5_1:58990772-58990791 | None:intergenic | 35.0% | |
| TCATAGGTTCAAACAAATGG+TGG | - | chr5_1:58990773-58990792 | None:intergenic | 35.0% | |
| GCTTCATAGGTTCAAACAAA+TGG | - | chr5_1:58990776-58990795 | None:intergenic | 35.0% | |
| TTGTTTGAACCTATGAAGCA+CGG | + | chr5_1:58990777-58990796 | Msa0740170:intron | 35.0% | |
| ACAGTTCAAAGTATGAAGCA+CGG | - | chr5_1:58990921-58990940 | None:intergenic | 35.0% | |
| AACTGTATCACTAACTAGGT+TGG | + | chr5_1:58990935-58990954 | Msa0740170:intron | 35.0% | |
| !! | TGATTCAGGTTTTCTTCTAC+AGG | + | chr5_1:58991072-58991091 | Msa0740170:CDS | 35.0% |
| TTTGGATCGAGAAACTTCTT+GGG | - | chr5_1:58991184-58991203 | None:intergenic | 35.0% | |
| ! | TTTTGGATCGAGAAACTTCT+TGG | - | chr5_1:58991185-58991204 | None:intergenic | 35.0% |
| TGAAGAGTTGCTTAGTTATG+TGG | + | chr5_1:58991317-58991336 | Msa0740170:intron | 35.0% | |
| ACAATTGATTGATACTGCGA+AGG | - | chr5_1:58991385-58991404 | None:intergenic | 35.0% | |
| TTGGATAAATGTGTCCAAAG+TGG | + | chr5_1:58991436-58991455 | Msa0740170:CDS | 35.0% | |
| TCGGCAAAATACTGTTTCAA+AGG | - | chr5_1:58991639-58991658 | None:intergenic | 35.0% | |
| AGCACAGAAAATGTCTCTAT+CGG | - | chr5_1:58991658-58991677 | None:intergenic | 35.0% | |
| CTTATTTGCTTGAAGGTTCT+TGG | + | chr5_1:58991841-58991860 | Msa0740170:intron | 35.0% | |
| ! | TGGAACTTGTGAGATTTTTG+AGG | + | chr5_1:58991861-58991880 | Msa0740170:CDS | 35.0% |
| GAGAGATTCAACATCTTCAA+TGG | + | chr5_1:58991901-58991920 | Msa0740170:CDS | 35.0% | |
| ACACATATAACAGACCTGAT+CGG | - | chr5_1:58991971-58991990 | None:intergenic | 35.0% | |
| TGTGTTGCAATAAGTAGTCA+TGG | + | chr5_1:58991986-58992005 | Msa0740170:intron | 35.0% | |
| AAGAATTCAACTGTAGTTGC+TGG | + | chr5_1:58992142-58992161 | Msa0740170:CDS | 35.0% | |
| ATGCACAACAAAATTCTGAG+TGG | - | chr5_1:58992192-58992211 | None:intergenic | 35.0% | |
| TTTAAATTAAGGGACTGCAG+TGG | + | chr5_1:58992433-58992452 | Msa0740170:intron | 35.0% | |
| TTTAAATTAAGGGACTGCAG+TGG | + | chr5_1:58992433-58992452 | Msa0740170:intron | 35.0% | |
| ! | GGTCTAAAGTTCAAACTAAC+AGG | + | chr5_1:58992587-58992606 | Msa0740170:intron | 35.0% |
| !! | CAAGATTGATGGGCATATTT+TGG | - | chr5_1:58992783-58992802 | None:intergenic | 35.0% |
| ! | GTATTTTCAATTGCGGATCT+GGG | - | chr5_1:58992866-58992885 | None:intergenic | 35.0% |
| AAATCACTATTTCAGGCATC+TGG | + | chr5_1:58993105-58993124 | Msa0740170:intron | 35.0% | |
| ATCTTATATTCAACTGGGCT+TGG | - | chr5_1:58993370-58993389 | None:intergenic | 35.0% | |
| CGGAGGTCATAATATGTTAA+AGG | + | chr5_1:58993424-58993443 | Msa0740170:intron | 35.0% | |
| GTCATAATATGTTAAAGGCC+TGG | + | chr5_1:58993429-58993448 | Msa0740170:intron | 35.0% | |
| GCAGCTTAACTCAAGTAAAA+TGG | - | chr5_1:58993653-58993672 | None:intergenic | 35.0% | |
| GCCATCAAGTATATGTTGAT+TGG | + | chr5_1:58993823-58993842 | Msa0740170:intron | 35.0% | |
| !! | ATGATGATGGAGTGAAACAA+TGG | - | chr5_1:58993877-58993896 | None:intergenic | 35.0% |
| !! | TTAGTTTGTGCTGTCATACT+TGG | + | chr5_1:58994031-58994050 | Msa0740170:intron | 35.0% |
| AAACTTCTGAGTTCTTCTGA+TGG | + | chr5_1:58994212-58994231 | Msa0740170:intron | 35.0% | |
| AACTTCTGAGTTCTTCTGAT+GGG | + | chr5_1:58994213-58994232 | Msa0740170:intron | 35.0% | |
| !! | TGCTTTTACATGCTTGTTGA+AGG | + | chr5_1:58994253-58994272 | Msa0740170:intron | 35.0% |
| ATTCATTTGCCAACTTTGTC+TGG | + | chr5_1:58994323-58994342 | Msa0740170:CDS | 35.0% | |
| TTCATTTGCCAACTTTGTCT+GGG | + | chr5_1:58994324-58994343 | Msa0740170:CDS | 35.0% | |
| AGGTAACACATTTATTTGCG+TGG | + | chr5_1:58994362-58994381 | Msa0740170:intron | 35.0% | |
| GATGGTCACATATTTACCTT+AGG | - | chr5_1:58994518-58994537 | None:intergenic | 35.0% | |
| !! | CGATGATTGCACTTTTGTTT+TGG | + | chr5_1:58994557-58994576 | Msa0740170:intron | 35.0% |
| GGAAAGAGTCAAATATAGCA+TGG | - | chr5_1:58994711-58994730 | None:intergenic | 35.0% | |
| GACTGCATGTGAATTTATAC+AGG | - | chr5_1:58994732-58994751 | None:intergenic | 35.0% | |
| CAAGGAAAGTTGAGAACAAT+TGG | - | chr5_1:58994754-58994773 | None:intergenic | 35.0% | |
| AGCATTGTTTACATATCACC+TGG | + | chr5_1:58994784-58994803 | Msa0740170:intron | 35.0% | |
| AGTATAGAGTCTAGTTGTCT+TGG | + | chr5_1:58994811-58994830 | Msa0740170:intron | 35.0% | |
| !!! | GCTTATTTGTTTTGGGGTAA+TGG | + | chr5_1:58994897-58994916 | Msa0740170:intron | 35.0% |
| TTCCTTAATTCATGCGGATT+GGG | + | chr5_1:58994927-58994946 | Msa0740170:intron | 35.0% | |
| ! | TCTGTCTTTTCTCACAACTA+AGG | - | chr5_1:58994956-58994975 | None:intergenic | 35.0% |
| AGTTGTGAGAAAAGACAGAA+TGG | + | chr5_1:58994957-58994976 | Msa0740170:intron | 35.0% | |
| AATGATTAAGCGAGGAAACA+GGG | - | chr5_1:58995123-58995142 | None:intergenic | 35.0% | |
| GCGCTAATATCAAAGCAAAT+TGG | - | chr5_1:58995211-58995230 | None:intergenic | 35.0% | |
| !! | AAACTGCCTGTAGTCATTTT+TGG | + | chr5_1:58995421-58995440 | Msa0740170:intron | 35.0% |
| TACCAACCAAAAATGACTAC+AGG | - | chr5_1:58995430-58995449 | None:intergenic | 35.0% | |
| ! | TACATTTTTGTGGGACACAT+GGG | - | chr5_1:58995628-58995647 | None:intergenic | 35.0% |
| ! | TTACATTTTTGTGGGACACA+TGG | - | chr5_1:58995629-58995648 | None:intergenic | 35.0% |
| ATGGTAATATTGGGGATTCT+AGG | + | chr5_1:58996001-58996020 | Msa0740170:three_prime_UTR | 35.0% | |
| CTGATCAAACTAGGATTTGA+TGG | + | chr5_1:58996032-58996051 | Msa0740170:three_prime_UTR | 35.0% | |
| !! | ATTTGATGGTAGCGATTTTG+AGG | + | chr5_1:58996046-58996065 | Msa0740170:three_prime_UTR | 35.0% |
| GAGGGGTTGAATTTATTAGA+TGG | + | chr5_1:58996105-58996124 | Msa0740170:three_prime_UTR | 35.0% | |
| AAAAAGAAGGAGCCAGAAAC+TGG | + | chr5_1:58987347-58987366 | Msa0740170:five_prime_UTR | 40.0% | |
| GAGGAAGAGAGAGAGTTATT+AGG | - | chr5_1:58987402-58987421 | None:intergenic | 40.0% | |
| TTCAACCATGTCTTCTATGC+TGG | + | chr5_1:58987435-58987454 | Msa0740170:exon | 40.0% | |
| ! | TTGATGTTGCTTACGAGTTG+AGG | - | chr5_1:58987611-58987630 | None:intergenic | 40.0% |
| TGACAGAACCTTTATCATCG+TGG | - | chr5_1:58987700-58987719 | None:intergenic | 40.0% | |
| TCTGTCACCATTTCTAACGA+CGG | + | chr5_1:58987713-58987732 | Msa0740170:CDS | 40.0% | |
| ATCAACTAAGATCTTGGCAG+CGG | - | chr5_1:58987774-58987793 | None:intergenic | 40.0% | |
| AAGCTACCCTAGAGAACTTA+TGG | + | chr5_1:58988154-58988173 | Msa0740170:intron | 40.0% | |
| TGACTGTTTGAGAGAGCTAA+CGG | - | chr5_1:58988222-58988241 | None:intergenic | 40.0% | |
| GCAAAAGATTAAGGCCTGTT+TGG | + | chr5_1:58988278-58988297 | Msa0740170:intron | 40.0% | |
| TTGTTTGTGACTGTGAAGGT+TGG | + | chr5_1:58988783-58988802 | Msa0740170:intron | 40.0% | |
| GCAAAGCCTTTCATTGAAGA+TGG | + | chr5_1:58988855-58988874 | Msa0740170:CDS | 40.0% | |
| TTATAGGAATGCATGCTCCT+TGG | + | chr5_1:58988905-58988924 | Msa0740170:CDS | 40.0% | |
| TGGACGCTGTAATTGCAATT+GGG | + | chr5_1:58989177-58989196 | Msa0740170:CDS | 40.0% | |
| TTGCAATTGGGACTGATGAT+AGG | + | chr5_1:58989189-58989208 | Msa0740170:CDS | 40.0% | |
| ACCATAATAGCTCACCAGTA+TGG | + | chr5_1:58989390-58989409 | Msa0740170:intron | 40.0% | |
| CTTCTGCAGGATCAAATTAG+AGG | + | chr5_1:58989498-58989517 | Msa0740170:intron | 40.0% | |
| AAATATGCTCGAGTGTGCTT+TGG | + | chr5_1:58989592-58989611 | Msa0740170:intron | 40.0% | |
| ! | TTGATGGCATGATAGAGATC+TGG | + | chr5_1:58989709-58989728 | Msa0740170:intron | 40.0% |
| GGTTTGACACTAAAACAGAC+CGG | - | chr5_1:58989823-58989842 | None:intergenic | 40.0% | |
| GGGAATGAAATGAATAGCAC+AGG | - | chr5_1:58989883-58989902 | None:intergenic | 40.0% | |
| TGTTGTTCCCTCCTCAATAA+AGG | + | chr5_1:58990116-58990135 | Msa0740170:intron | 40.0% | |
| CTAGGTAACCTTTATTGAGG+AGG | - | chr5_1:58990127-58990146 | None:intergenic | 40.0% | |
| TCATGGGTAGTGAGTGAAAT+GGG | - | chr5_1:58990464-58990483 | None:intergenic | 40.0% | |
| TTCATGGGTAGTGAGTGAAA+TGG | - | chr5_1:58990465-58990484 | None:intergenic | 40.0% | |
| TCACTCACTACCCATGAATA+AGG | + | chr5_1:58990467-58990486 | Msa0740170:intron | 40.0% | |
| CACTCACTACCCATGAATAA+GGG | + | chr5_1:58990468-58990487 | Msa0740170:intron | 40.0% | |
| ACTCACTACCCATGAATAAG+GGG | + | chr5_1:58990469-58990488 | Msa0740170:intron | 40.0% | |
| ACATAGTCATCCATCCAGAA+AGG | + | chr5_1:58990701-58990720 | Msa0740170:intron | 40.0% | |
| AAGGTCTCTTGGTCATTCTA+TGG | + | chr5_1:58990720-58990739 | Msa0740170:intron | 40.0% | |
| AGGTCTCTTGGTCATTCTAT+GGG | + | chr5_1:58990721-58990740 | Msa0740170:intron | 40.0% | |
| !! | CAAACAAATGGTGGGTCAAT+TGG | - | chr5_1:58990764-58990783 | None:intergenic | 40.0% |
| ! | TGTAATCATAGGTGTCGTGT+TGG | + | chr5_1:58990842-58990861 | Msa0740170:intron | 40.0% |
| ! | ATCACTAACTAGGTTGGACT+TGG | + | chr5_1:58990941-58990960 | Msa0740170:intron | 40.0% |
| ! | TCACTAACTAGGTTGGACTT+GGG | + | chr5_1:58990942-58990961 | Msa0740170:intron | 40.0% |
| ! | GATAGAGACATTTTCTGTGC+TGG | + | chr5_1:58991657-58991676 | Msa0740170:CDS | 40.0% |
| ATCTTCAATGGATGTCCATC+TGG | + | chr5_1:58991913-58991932 | Msa0740170:CDS | 40.0% | |
| AATTCAACTGTAGTTGCTGG+TGG | + | chr5_1:58992145-58992164 | Msa0740170:CDS | 40.0% | |
| ACGTGGTTATTGTTGTCAGA+TGG | + | chr5_1:58992256-58992275 | Msa0740170:intron | 40.0% | |
| GTTGTCAGATGGAAATAAGC+CGG | + | chr5_1:58992267-58992286 | Msa0740170:intron | 40.0% | |
| ! | TACCTCAAGAGCTTTTGCAT+AGG | - | chr5_1:58992348-58992367 | None:intergenic | 40.0% |
| CAGTGGCTGTTTAACAAAAG+TGG | + | chr5_1:58992450-58992469 | Msa0740170:intron | 40.0% | |
| CAGTGGCTGTTTAACAAAAG+TGG | + | chr5_1:58992450-58992469 | Msa0740170:intron | 40.0% | |
| TTGCGGATCTGGGAAAATAT+TGG | - | chr5_1:58992856-58992875 | None:intergenic | 40.0% | |
| ! | GGTATTTTCAATTGCGGATC+TGG | - | chr5_1:58992867-58992886 | None:intergenic | 40.0% |
| ATTGCATTATTGTGGGAGGA+AGG | + | chr5_1:58992897-58992916 | Msa0740170:intron | 40.0% | |
| TTGCATTATTGTGGGAGGAA+GGG | + | chr5_1:58992898-58992917 | Msa0740170:intron | 40.0% | |
| TGTTATTGCAGGTTATTCCC+CGG | + | chr5_1:58993179-58993198 | Msa0740170:intron | 40.0% | |
| AGCATTGTCACATAATTGCC+GGG | - | chr5_1:58993200-58993219 | None:intergenic | 40.0% | |
| CAGCATTGTCACATAATTGC+CGG | - | chr5_1:58993201-58993220 | None:intergenic | 40.0% | |
| ACATATACCTGCATTTGGAG+AGG | + | chr5_1:58993320-58993339 | Msa0740170:CDS | 40.0% | |
| ATTTGGAGAGGCTTAGAAGT+AGG | + | chr5_1:58993332-58993351 | Msa0740170:CDS | 40.0% | |
| TTTGGAGAGGCTTAGAAGTA+GGG | + | chr5_1:58993333-58993352 | Msa0740170:CDS | 40.0% | |
| TTTGCATGAACAGGAATAGC+TGG | + | chr5_1:58993764-58993783 | Msa0740170:intron | 40.0% | |
| !! | TATGGTTTGCTTCTGAGCAA+GGG | - | chr5_1:58993985-58994004 | None:intergenic | 40.0% |
| !! | ATATGGTTTGCTTCTGAGCA+AGG | - | chr5_1:58993986-58994005 | None:intergenic | 40.0% |
| TGCTAATGTCCTATGCACTT+TGG | + | chr5_1:58994065-58994084 | Msa0740170:intron | 40.0% | |
| TAATGTCCTATGCACTTTGG+TGG | + | chr5_1:58994068-58994087 | Msa0740170:intron | 40.0% | |
| ! | TTACATGCTTGTTGAAGGTG+AGG | + | chr5_1:58994258-58994277 | Msa0740170:intron | 40.0% |
| ! | TACATGCTTGTTGAAGGTGA+GGG | + | chr5_1:58994259-58994278 | Msa0740170:intron | 40.0% |
| TGTGTTACCTTTACAACTGC+AGG | - | chr5_1:58994352-58994371 | None:intergenic | 40.0% | |
| TGCTATAAATGCTGCTACAG+AGG | + | chr5_1:58994451-58994470 | Msa0740170:CDS | 40.0% | |
| TTTCATCCACACTTAAGACC+AGG | - | chr5_1:58994484-58994503 | None:intergenic | 40.0% | |
| ATAGCATGGCACATATCCAA+AGG | - | chr5_1:58994697-58994716 | None:intergenic | 40.0% | |
| CTAGACTCTATACTCAAACC+AGG | - | chr5_1:58994805-58994824 | None:intergenic | 40.0% | |
| !! | ATAAGCATTTGATGGTGAGC+AGG | - | chr5_1:58994883-58994902 | None:intergenic | 40.0% |
| GTTCCTTAATTCATGCGGAT+TGG | + | chr5_1:58994926-58994945 | Msa0740170:intron | 40.0% | |
| ATCCCAATCCGCATGAATTA+AGG | - | chr5_1:58994932-58994951 | None:intergenic | 40.0% | |
| CAATGATTAAGCGAGGAAAC+AGG | - | chr5_1:58995124-58995143 | None:intergenic | 40.0% | |
| TTCTTGGTACAGCTACTACA+TGG | - | chr5_1:58995170-58995189 | None:intergenic | 40.0% | |
| AGCTATCAATGCGAATTGCA+TGG | - | chr5_1:58995233-58995252 | None:intergenic | 40.0% | |
| !!! | TGCCTGTAGTCATTTTTGGT+TGG | + | chr5_1:58995425-58995444 | Msa0740170:intron | 40.0% |
| ATCACATGTGTGCCTATTCT+AGG | + | chr5_1:58995659-58995678 | Msa0740170:intron | 40.0% | |
| TACCAGAAACATACATCCAG+TGG | - | chr5_1:58995930-58995949 | None:intergenic | 40.0% | |
| GAGCATCATCTGATCAAACT+AGG | + | chr5_1:58996023-58996042 | Msa0740170:three_prime_UTR | 40.0% | |
| GCTTACCAGCATAGAAGACA+TGG | - | chr5_1:58987443-58987462 | None:intergenic | 45.0% | |
| AACGCGTAACGAAGAAGAGT+TGG | - | chr5_1:58987473-58987492 | None:intergenic | 45.0% | |
| AAGGTACAGACACATCGCAA+GGG | + | chr5_1:58987582-58987601 | Msa0740170:CDS | 45.0% | |
| TCAACTAAGATCTTGGCAGC+GGG | - | chr5_1:58987773-58987792 | None:intergenic | 45.0% | |
| TGCTAAGTCTCAAGACTCTG+AGG | + | chr5_1:58987796-58987815 | Msa0740170:CDS | 45.0% | |
| CAATGTCACAAAACGTAGGC+TGG | + | chr5_1:58988502-58988521 | Msa0740170:intron | 45.0% | |
| AGACTGTCTGAGAGAGCTTA+CGG | - | chr5_1:58988667-58988686 | None:intergenic | 45.0% | |
| AGAGCTAGCAGTTAGCATTG+AGG | + | chr5_1:58989049-58989068 | Msa0740170:CDS | 45.0% | |
| ! | GAGCTAGCAGTTAGCATTGA+GGG | + | chr5_1:58989050-58989069 | Msa0740170:CDS | 45.0% |
| GTGGACGCTGTAATTGCAAT+TGG | + | chr5_1:58989176-58989195 | Msa0740170:CDS | 45.0% | |
| GCCATACTGGTGAGCTATTA+TGG | - | chr5_1:58989394-58989413 | None:intergenic | 45.0% | |
| AATAGCTCACCAGTATGGCA+AGG | + | chr5_1:58989395-58989414 | Msa0740170:intron | 45.0% | |
| GTGTTTGAGTGTACTTCTGC+AGG | + | chr5_1:58989485-58989504 | Msa0740170:intron | 45.0% | |
| GAGGGAACAACAACAAAGAC+TGG | - | chr5_1:58990108-58990127 | None:intergenic | 45.0% | |
| ACTACCCATGAATAAGGGGT+TGG | + | chr5_1:58990473-58990492 | Msa0740170:intron | 45.0% | |
| GACTATGTCTTGGCTCAAGT+CGG | - | chr5_1:58990689-58990708 | None:intergenic | 45.0% | |
| CTGGATGGATGACTATGTCT+TGG | - | chr5_1:58990699-58990718 | None:intergenic | 45.0% | |
| ATCCATCCAGAAAGGTCTCT+TGG | + | chr5_1:58990709-58990728 | Msa0740170:intron | 45.0% | |
| GAATGACCAAGAGACCTTTC+TGG | - | chr5_1:58990718-58990737 | None:intergenic | 45.0% | |
| GGTCTCTTGGTCATTCTATG+GGG | + | chr5_1:58990722-58990741 | Msa0740170:intron | 45.0% | |
| ! | GGTTTTCTTCTACAGGTTCC+TGG | + | chr5_1:58991079-58991098 | Msa0740170:CDS | 45.0% |
| TTTCTTCTACAGGTTCCTGG+TGG | + | chr5_1:58991082-58991101 | Msa0740170:CDS | 45.0% | |
| CGCGACTCATTTCTTGTCAA+TGG | + | chr5_1:58991112-58991131 | Msa0740170:CDS | 45.0% | |
| GAACAACTTTGGCACCACTT+TGG | - | chr5_1:58991453-58991472 | None:intergenic | 45.0% | |
| ! | TATTGGTGATCTGGCAACAC+AGG | + | chr5_1:58991486-58991505 | Msa0740170:CDS | 45.0% |
| AAAAGAGTTGCTGCTGCAAC+TGG | + | chr5_1:58991702-58991721 | Msa0740170:CDS | 45.0% | |
| AAAGAGTTGCTGCTGCAACT+GGG | + | chr5_1:58991703-58991722 | Msa0740170:CDS | 45.0% | |
| TGGAAATAAGCCGGTACCTA+AGG | + | chr5_1:58992276-58992295 | Msa0740170:CDS | 45.0% | |
| CTCCTATGCAAAAGCTCTTG+AGG | + | chr5_1:58992343-58992362 | Msa0740170:CDS | 45.0% | |
| CTATGCTCATCGTGGATGAA+GGG | - | chr5_1:58993037-58993056 | None:intergenic | 45.0% | |
| CGATATTCCTATGCTCATCG+TGG | - | chr5_1:58993045-58993064 | None:intergenic | 45.0% | |
| GCATTGTCACATAATTGCCG+GGG | - | chr5_1:58993199-58993218 | None:intergenic | 45.0% | |
| CGGCAATTATGTGACAATGC+TGG | + | chr5_1:58993199-58993218 | Msa0740170:CDS | 45.0% | |
| TTCTAAGCCTCTCCAAATGC+AGG | - | chr5_1:58993330-58993349 | None:intergenic | 45.0% | |
| TGAATACAAGTTCAAGCCGG+AGG | + | chr5_1:58993407-58993426 | Msa0740170:intron | 45.0% | |
| GATCAGTTCAGGTCTACAAC+AGG | - | chr5_1:58993455-58993474 | None:intergenic | 45.0% | |
| CAAGAGCTTGAGATCAGTTC+AGG | - | chr5_1:58993466-58993485 | None:intergenic | 45.0% | |
| GGAGTGAAACAATGGTCAAG+AGG | - | chr5_1:58993869-58993888 | None:intergenic | 45.0% | |
| TTGAAGCCACCAAAGTGCAT+AGG | - | chr5_1:58994077-58994096 | None:intergenic | 45.0% | |
| ! | CAGAGGCACACATGAATTCA+AGG | - | chr5_1:58994141-58994160 | None:intergenic | 45.0% |
| TGAATCAGCAATTCCACCAG+TGG | - | chr5_1:58994308-58994327 | None:intergenic | 45.0% | |
| AAATGGAATCCTGCTGAGGA+TGG | - | chr5_1:58994988-58995007 | None:intergenic | 45.0% | |
| ATTAAGCGAGGAAACAGGGA+GGG | - | chr5_1:58995119-58995138 | None:intergenic | 45.0% | |
| GCTGCTTCAATGATTAAGCG+AGG | - | chr5_1:58995131-58995150 | None:intergenic | 45.0% | |
| TGTAATATGCGCAATGCCAC+TGG | + | chr5_1:58995911-58995930 | Msa0740170:three_prime_UTR | 45.0% | |
| TGCCACTGGATGTATGTTTC+TGG | + | chr5_1:58995925-58995944 | Msa0740170:three_prime_UTR | 45.0% | |
| !!! | ATGGTAGCGATTTTGAGGCA+TGG | + | chr5_1:58996051-58996070 | Msa0740170:three_prime_UTR | 45.0% |
| ! | ATGGTTGAAGACGGTGATGG+AGG | - | chr5_1:58987424-58987443 | None:intergenic | 50.0% |
| GACATGGTTGAAGACGGTGA+TGG | - | chr5_1:58987427-58987446 | None:intergenic | 50.0% | |
| ! | GAAGGTACAGACACATCGCA+AGG | + | chr5_1:58987581-58987600 | Msa0740170:CDS | 50.0% |
| ATGAGTTTGTCCATACCGCG+AGG | - | chr5_1:58987677-58987696 | None:intergenic | 50.0% | |
| AGTAGCGCCGTCGTTAGAAA+TGG | - | chr5_1:58987723-58987742 | None:intergenic | 50.0% | |
| GTCACAAAACGTAGGCTGGT+AGG | + | chr5_1:58988506-58988525 | Msa0740170:intron | 50.0% | |
| CTGAGAGAGCTTACGGAAAC+AGG | - | chr5_1:58988660-58988679 | None:intergenic | 50.0% | |
| TGCAAGCAATACCACAGTGG+TGG | - | chr5_1:58988817-58988836 | None:intergenic | 50.0% | |
| AGCTGCAAGCAATACCACAG+TGG | - | chr5_1:58988820-58988839 | None:intergenic | 50.0% | |
| ATTGGAGAGCCTTGCCATAC+TGG | - | chr5_1:58989407-58989426 | None:intergenic | 50.0% | |
| GAATGTCCACTTTCGAGCAG+TGG | + | chr5_1:58990387-58990406 | Msa0740170:intron | 50.0% | |
| TATGTCTTGGCTCAAGTCGG+TGG | - | chr5_1:58990686-58990705 | None:intergenic | 50.0% | |
| GACCAAGAGACCTTTCTGGA+TGG | - | chr5_1:58990714-58990733 | None:intergenic | 50.0% | |
| TGTCTGTGTCCGTGCTTCAT+AGG | - | chr5_1:58990789-58990808 | None:intergenic | 50.0% | |
| ATGAAGCACGGACACAGACA+CGG | + | chr5_1:58990789-58990808 | Msa0740170:intron | 50.0% | |
| ! | CATAGGTGTCGTGTTGGTGT+CGG | + | chr5_1:58990848-58990867 | Msa0740170:intron | 50.0% |
| TATGAAGCACGGACACTCCT+CGG | - | chr5_1:58990910-58990929 | None:intergenic | 50.0% | |
| CAGGCGTGAGAGAACAACTT+TGG | - | chr5_1:58991464-58991483 | None:intergenic | 50.0% | |
| CAAAGTTGTTCTCTCACGCC+TGG | + | chr5_1:58991462-58991481 | Msa0740170:CDS | 50.0% | |
| TTGCCAGATCACCAATAGCC+AGG | - | chr5_1:58991483-58991502 | None:intergenic | 50.0% | |
| AAGAGTTGCTGCTGCAACTG+GGG | + | chr5_1:58991704-58991723 | Msa0740170:CDS | 50.0% | |
| GGAGAACTATGGTGGCTGTT+TGG | - | chr5_1:58991939-58991958 | None:intergenic | 50.0% | |
| TCAACTGTAGTTGCTGGTGG+AGG | + | chr5_1:58992148-58992167 | Msa0740170:CDS | 50.0% | |
| CCTATGCTCATCGTGGATGA+AGG | - | chr5_1:58993038-58993057 | None:intergenic | 50.0% | |
| CCTTCATCCACGATGAGCAT+AGG | + | chr5_1:58993035-58993054 | Msa0740170:intron | 50.0% | |
| ACGAAGGTCAACCAACCAGA+AGG | - | chr5_1:58993274-58993293 | None:intergenic | 50.0% | |
| TTCATGTGTGCCTCTGTGTG+TGG | + | chr5_1:58994145-58994164 | Msa0740170:intron | 50.0% | |
| TCATGTGTGCCTCTGTGTGT+GGG | + | chr5_1:58994146-58994165 | Msa0740170:intron | 50.0% | |
| !! | AAGGTGAGGGTGCTCCATTT+GGG | + | chr5_1:58994272-58994291 | Msa0740170:intron | 50.0% |
| !! | AGCTTGCCTGGTCTTAAGTG+TGG | + | chr5_1:58994475-58994494 | Msa0740170:CDS | 50.0% |
| ATGGTGTTTCCATCCTCAGC+AGG | + | chr5_1:58994976-58994995 | Msa0740170:intron | 50.0% | |
| CTGGAAATGGAATCCTGCTG+AGG | - | chr5_1:58994992-58995011 | None:intergenic | 50.0% | |
| TTAAGCGAGGAAACAGGGAG+GGG | - | chr5_1:58995118-58995137 | None:intergenic | 50.0% | |
| GATTAAGCGAGGAAACAGGG+AGG | - | chr5_1:58995120-58995139 | None:intergenic | 50.0% | |
| ! | ATGTAGTCCGAGAGTGCACA+AGG | + | chr5_1:58995760-58995779 | Msa0740170:intron | 50.0% |
| ATCTACGCATTCCTCGTCCA+CGG | - | chr5_1:58995840-58995859 | None:intergenic | 50.0% | |
| !! | GTTGAAGACGGTGATGGAGG+AGG | - | chr5_1:58987421-58987440 | None:intergenic | 55.0% |
| TAGGGTGGTTCGAACGACGT+CGG | - | chr5_1:58987651-58987670 | None:intergenic | 55.0% | |
| GTGACTGTGAAGGTTGGCGA+TGG | + | chr5_1:58988789-58988808 | Msa0740170:intron | 55.0% | |
| AATAGCACAGGCACAGCGAG+TGG | - | chr5_1:58989871-58989890 | None:intergenic | 55.0% | |
| CTCTGACGCGAGTCCAACAA+CGG | + | chr5_1:58990872-58990891 | Msa0740170:intron | 55.0% | |
| TCTGACGCGAGTCCAACAAC+GGG | + | chr5_1:58990873-58990892 | Msa0740170:intron | 55.0% | |
| GATTAGGCGTGTCCCGTTGT+TGG | - | chr5_1:58990888-58990907 | None:intergenic | 55.0% | |
| GTTCTCTCACGCCTGGCTAT+TGG | + | chr5_1:58991469-58991488 | Msa0740170:CDS | 55.0% | |
| ! | ACGCCTGGCTATTGGTGATC+TGG | + | chr5_1:58991477-58991496 | Msa0740170:CDS | 55.0% |
| AGAGTTGCTGCTGCAACTGG+GGG | + | chr5_1:58991705-58991724 | Msa0740170:CDS | 55.0% | |
| ATGGTGGCTGTTTGGCCAGA+TGG | - | chr5_1:58991931-58991950 | None:intergenic | 55.0% | |
| ACAGCCACCATAGTTCTCCG+TGG | + | chr5_1:58991940-58991959 | Msa0740170:CDS | 55.0% | |
| TCCACCACGGAGAACTATGG+TGG | - | chr5_1:58991947-58991966 | None:intergenic | 55.0% | |
| GTGCATGCTGCCTTAGGTAC+CGG | - | chr5_1:58992289-58992308 | None:intergenic | 55.0% | |
| TTGTGCGTGCATGCTGCCTT+AGG | - | chr5_1:58992295-58992314 | None:intergenic | 55.0% | |
| CAGCATGCACGCACAATAGC+TGG | + | chr5_1:58992299-58992318 | Msa0740170:CDS | 55.0% | |
| TTATTGTGGGAGGAAGGGCG+TGG | + | chr5_1:58992903-58992922 | Msa0740170:intron | 55.0% | |
| CAGAAACACGCGCTTCCTTC+TGG | + | chr5_1:58993256-58993275 | Msa0740170:CDS | 55.0% | |
| AACACGCGCTTCCTTCTGGT+TGG | + | chr5_1:58993260-58993279 | Msa0740170:CDS | 55.0% | |
| GTTCAGGTCTACAACAGGCC+AGG | - | chr5_1:58993450-58993469 | None:intergenic | 55.0% | |
| TCAGGTACACCCACACACAG+AGG | - | chr5_1:58994158-58994177 | None:intergenic | 55.0% | |
| !! | GAAGGTGAGGGTGCTCCATT+TGG | + | chr5_1:58994271-58994290 | Msa0740170:intron | 55.0% |
| !! | AGGTGAGGGTGCTCCATTTG+GGG | + | chr5_1:58994273-58994292 | Msa0740170:intron | 55.0% |
| GTGGCTATGTCGACCCCAAA+TGG | - | chr5_1:58994289-58994308 | None:intergenic | 55.0% | |
| ! | TTTGGGGTCGACATAGCCAC+TGG | + | chr5_1:58994289-58994308 | Msa0740170:CDS | 55.0% |
| TGCAGGCTCCCAGACAAAGT+TGG | - | chr5_1:58994335-58994354 | None:intergenic | 55.0% | |
| CTGGGAGCCTGCAGTTGTAA+AGG | + | chr5_1:58994342-58994361 | Msa0740170:CDS | 55.0% | |
| AGCCTCTCCTTGTGCACTCT+CGG | - | chr5_1:58995770-58995789 | None:intergenic | 55.0% | |
| GACGTCGTTCGAACCACCCT+AGG | + | chr5_1:58987650-58987669 | Msa0740170:CDS | 60.0% | |
| GTCCATACCGCGAGGACCTA+GGG | - | chr5_1:58987669-58987688 | None:intergenic | 60.0% | |
| TGTCCATACCGCGAGGACCT+AGG | - | chr5_1:58987670-58987689 | None:intergenic | 60.0% | |
| TGGCGATGGAACCACCACTG+TGG | + | chr5_1:58988803-58988822 | Msa0740170:CDS | 60.0% | |
| GAGCAGCCACTGCTCGAAAG+TGG | - | chr5_1:58990396-58990415 | None:intergenic | 60.0% | |
| AACGGGACACGCCTAATCCG+AGG | + | chr5_1:58990890-58990909 | Msa0740170:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr5_1:58990904-58990923 | None:intergenic | 60.0% | |
| GAGTCGCGCATGTTACCACC+AGG | - | chr5_1:58991100-58991119 | None:intergenic | 60.0% | |
| GCCACCATAGTTCTCCGTGG+TGG | + | chr5_1:58991943-58991962 | Msa0740170:CDS | 60.0% | |
| GGCTCCACCACGGAGAACTA+TGG | - | chr5_1:58991950-58991969 | None:intergenic | 60.0% | |
| ! | AGACCTGATCGGCTCCACCA+CGG | - | chr5_1:58991960-58991979 | None:intergenic | 60.0% |
| CTCATCGTGGATGAAGGGCG+TGG | - | chr5_1:58993032-58993051 | None:intergenic | 60.0% | |
| TGCTACAGAGGCAGCTTGCC+TGG | + | chr5_1:58994463-58994482 | Msa0740170:CDS | 60.0% | |
| ! | GTCCGAGAGTGCACAAGGAG+AGG | + | chr5_1:58995765-58995784 | Msa0740170:intron | 60.0% |
| AGAGGCTGCTGCAAGTGCCA+TGG | + | chr5_1:58995783-58995802 | Msa0740170:CDS | 60.0% | |
| GAGGCTGCTGCAAGTGCCAT+GGG | + | chr5_1:58995784-58995803 | Msa0740170:CDS | 60.0% | |
| GGTTCGAACGACGTCGGCGA+CGG | - | chr5_1:58987645-58987664 | None:intergenic | 65.0% | |
| CGAACCACCCTAGGTCCTCG+CGG | + | chr5_1:58987659-58987678 | Msa0740170:CDS | 65.0% | |
| CATACCGCGAGGACCTAGGG+TGG | - | chr5_1:58987666-58987685 | None:intergenic | 65.0% | |
| CACCCTAGGTCCTCGCGGTA+TGG | + | chr5_1:58987664-58987683 | Msa0740170:CDS | 65.0% | |
| ! | TCTCCGTGGTGGAGCCGATC+AGG | + | chr5_1:58991954-58991973 | Msa0740170:CDS | 65.0% |
| GGGGTCGACATAGCCACTGG+TGG | + | chr5_1:58994292-58994311 | Msa0740170:CDS | 65.0% | |
| GCTGCTGCAAGTGCCATGGG+AGG | + | chr5_1:58995787-58995806 | Msa0740170:CDS | 65.0% | |
| GCAAGTGCCATGGGAGGCAG+AGG | + | chr5_1:58995793-58995812 | Msa0740170:CDS | 65.0% | |
| GCATTCCTCGTCCACGGCCA+CGG | - | chr5_1:58995834-58995853 | None:intergenic | 65.0% | |
| GCCATGGGAGGCAGAGGTCG+CGG | + | chr5_1:58995799-58995818 | Msa0740170:CDS | 70.0% | |
| TCCGCGACCTCTGCCTCCCA+TGG | - | chr5_1:58995803-58995822 | None:intergenic | 70.0% | |
| ATGGGAGGCAGAGGTCGCGG+AGG | + | chr5_1:58995802-58995821 | Msa0740170:CDS | 70.0% | |
| GGTCGCGGAGGTGGTTTCCG+TGG | + | chr5_1:58995814-58995833 | Msa0740170:CDS | 70.0% | |
| GGAGGTGGTTTCCGTGGCCG+TGG | + | chr5_1:58995820-58995839 | Msa0740170:CDS | 70.0% | |
| GGTTTCCGTGGCCGTGGACG+AGG | + | chr5_1:58995826-58995845 | Msa0740170:CDS | 70.0% | |
| GGAGGCAGAGGTCGCGGAGG+TGG | + | chr5_1:58995805-58995824 | Msa0740170:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 58987317 | 58996266 | 58987317 | ID=Msa0740170;Name=Msa0740170 |
| chr5_1 | mRNA | 58987317 | 58996266 | 58987317 | ID=Msa0740170-mRNA-1;Parent=Msa0740170;Name=Msa0740170-mRNA-1;_AED=0.10;_eAED=0.10;_QI=125|0.84|0.85|1|1|1|14|405|611 |
| chr5_1 | exon | 58987317 | 58987456 | 58987317 | ID=Msa0740170-mRNA-1:exon:16900;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58987557 | 58987817 | 58987557 | ID=Msa0740170-mRNA-1:exon:16901;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58988801 | 58988926 | 58988801 | ID=Msa0740170-mRNA-1:exon:16902;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58989032 | 58989235 | 58989032 | ID=Msa0740170-mRNA-1:exon:16903;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58991061 | 58991263 | 58991061 | ID=Msa0740170-mRNA-1:exon:16904;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58991372 | 58991507 | 58991372 | ID=Msa0740170-mRNA-1:exon:16905;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58991648 | 58991764 | 58991648 | ID=Msa0740170-mRNA-1:exon:16906;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58991856 | 58991975 | 58991856 | ID=Msa0740170-mRNA-1:exon:16907;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58992082 | 58992180 | 58992082 | ID=Msa0740170-mRNA-1:exon:16908;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58992275 | 58992364 | 58992275 | ID=Msa0740170-mRNA-1:exon:16909;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58993190 | 58993394 | 58993190 | ID=Msa0740170-mRNA-1:exon:16910;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58994275 | 58994363 | 58994275 | ID=Msa0740170-mRNA-1:exon:16911;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58994446 | 58994520 | 58994446 | ID=Msa0740170-mRNA-1:exon:16912;Parent=Msa0740170-mRNA-1 |
| chr5_1 | exon | 58995766 | 58996266 | 58995766 | ID=Msa0740170-mRNA-1:exon:16913;Parent=Msa0740170-mRNA-1 |
| chr5_1 | five_prime_UTR | 58987317 | 58987441 | 58987317 | ID=Msa0740170-mRNA-1:five_prime_utr;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58987442 | 58987456 | 58987442 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58987557 | 58987817 | 58987557 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58988801 | 58988926 | 58988801 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58989032 | 58989235 | 58989032 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58991061 | 58991263 | 58991061 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58991372 | 58991507 | 58991372 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58991648 | 58991764 | 58991648 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58991856 | 58991975 | 58991856 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58992082 | 58992180 | 58992082 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58992275 | 58992364 | 58992275 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58993190 | 58993394 | 58993190 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58994275 | 58994363 | 58994275 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58994446 | 58994520 | 58994446 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | CDS | 58995766 | 58995861 | 58995766 | ID=Msa0740170-mRNA-1:cds;Parent=Msa0740170-mRNA-1 |
| chr5_1 | three_prime_UTR | 58995862 | 58996266 | 58995862 | ID=Msa0740170-mRNA-1:three_prime_utr;Parent=Msa0740170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
