AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223300 MtrunA17_Chr2g0328601 88.553 795 38 5 1 756 11 791 0.0 1369
Msa0223300 MtrunA17_Chr4g0031981 73.806 691 143 1 104 756 114 804 0.0 1090
Msa0223300 MtrunA17_Chr5g0400161 88.889 72 8 0 620 691 1 72 2.88e-39 139
Msa0223300 MtrunA17_Chr2g0328911 24.174 484 294 18 294 740 286 733 1.35e-20 97.1
Msa0223300 MtrunA17_Chr1g0184291 31.156 199 110 7 551 740 165 345 2.31e-13 72.4
Msa0223300 MtrunA17_Chr2g0322151 30.968 155 92 3 591 740 200 344 1.23e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223300 AT3G46740.1 71.449 690 159 1 105 756 129 818 0.0 1060
Msa0223300 AT4G09080.1 55.663 415 125 7 382 756 1 396 1.41e-145 432
Msa0223300 AT1G35860.1 50.207 482 147 8 258 731 3 399 1.55e-145 432
Msa0223300 AT4G09080.2 55.663 415 125 7 382 756 12 407 2.67e-145 432
Msa0223300 AT4G09080.3 62.154 325 82 3 472 756 2 325 1.82e-134 401
Msa0223300 AT5G19620.1 23.171 492 299 14 294 744 269 722 2.80e-22 102
Msa0223300 AT3G44160.1 28.986 207 122 7 515 712 122 312 2.59e-13 72.8

Find 252 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCGTTCATTTGGAGATTA+TGG 0.115100 2_1:-72841695 Msa0223300:CDS
CTTCCCTGCTTCAATATTAA+AGG 0.116562 2_1:+72841102 None:intergenic
TCCTACCTCCAGCATGTTTC+TGG 0.139062 2_1:+72838432 None:intergenic
AATATTATATTATACCTCTT+TGG 0.227884 2_1:+72841423 None:intergenic
TGTGCTTCAGTGGTTAATTT+TGG 0.227908 2_1:-72841580 Msa0223300:CDS
TTGTAACCCCTTACAGAATA+AGG 0.240655 2_1:+72838475 None:intergenic
AGGCATAATTGTTGAAATTA+AGG 0.242334 2_1:-72840999 Msa0223300:CDS
GGTGGTGGAGGTTGGTGGTT+TGG 0.263241 2_1:-72842273 Msa0223300:CDS
TGAAATGATTTCTATTGTTC+CGG 0.291518 2_1:-72842028 Msa0223300:CDS
GGTGCATTATATTTACGTTT+TGG 0.299305 2_1:-72838116 Msa0223300:CDS
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 2_1:-72841642 Msa0223300:CDS
ATATTATATTATACCTCTTT+GGG 0.310138 2_1:+72841424 None:intergenic
CTGATTGTCTTGATATTTGA+TGG 0.314401 2_1:-72837932 Msa0223300:three_prime_UTR
GGAGTATGCACATCCATATT+TGG 0.314750 2_1:-72840556 Msa0223300:CDS
GGTGGACATGGTGGTGGTGG+TGG 0.322426 2_1:-72842312 Msa0223300:CDS
TTCTTTAGTACTTGGAGAAT+TGG 0.326717 2_1:-72837984 Msa0223300:three_prime_UTR
TTATCTACACCATCCAAATA+TGG 0.337762 2_1:+72840543 None:intergenic
GTGGCAGTGGTGGTGGAGGT+TGG 0.339631 2_1:-72842281 Msa0223300:CDS
TTGGTGGCCCTTATTCTGTA+AGG 0.339722 2_1:-72838483 Msa0223300:CDS
ATCTCCAAATGAACGGTATT+CGG 0.343587 2_1:+72841700 None:intergenic
GAAGAAGTTGCTGGTTGTTA+TGG 0.346483 2_1:+72840717 None:intergenic
ACCGTTCATTTGGAGATTAT+GGG 0.350361 2_1:-72841694 Msa0223300:CDS
GGTGGAGGTTGGTGGTTTGG+AGG 0.353180 2_1:-72842270 Msa0223300:CDS
CCACAGAGTAAATTCACTTA+TGG 0.360623 2_1:-72840283 Msa0223300:CDS
TTTGCCGAATACCGTTCATT+TGG 0.363887 2_1:-72841704 Msa0223300:CDS
AGTAATGGTGGCAGTGGTGG+TGG 0.368723 2_1:-72842288 Msa0223300:CDS
GAGTTACGGATACCTGTTAA+AGG 0.374913 2_1:-72838311 Msa0223300:CDS
AACCTCACAAACAACCTCTT+TGG 0.380682 2_1:+72841546 None:intergenic
ATGGGTCAAGGTTCATCTTA+TGG 0.381032 2_1:-72838200 Msa0223300:CDS
GGAGGAAACGGAGGAGGAGG+AGG 0.384034 2_1:-72842249 Msa0223300:CDS
GCAGAGCATGGGAATGATCT+AGG 0.384359 2_1:-72838269 Msa0223300:CDS
GGAGGAGGAAACGGAGGAGG+AGG 0.387801 2_1:-72842252 Msa0223300:CDS
GTTGCAGAAGATTAGGGATA+AGG 0.390963 2_1:-72841635 Msa0223300:CDS
GGTAATCAAATTTGTGCAAA+TGG 0.394320 2_1:-72840226 Msa0223300:CDS
GTCAGGAGAGGGAGTATAAG+AGG 0.396728 2_1:-72841753 Msa0223300:CDS
TTTGAAAAGGTTGATCTTGA+AGG 0.399772 2_1:-72841943 Msa0223300:CDS
TTTCATATAGTGAGAGTACT+TGG 0.399955 2_1:-72841885 Msa0223300:CDS
AAGAAAGGAGTTTGAGTGCT+AGG 0.400808 2_1:-72841660 Msa0223300:CDS
TACACATGCATGCCTTTAAC+AGG 0.406430 2_1:+72838299 None:intergenic
GCAGTGGTGGTGGAGGTTGG+TGG 0.409155 2_1:-72842278 Msa0223300:CDS
ATTCACTTATGGACTTGTAA+TGG 0.409835 2_1:-72840272 Msa0223300:CDS
TGGTGGTTTGGAGGAGGAAA+CGG 0.413877 2_1:-72842261 Msa0223300:CDS
GAAATGATTTCTATTGTTCC+GGG 0.419998 2_1:-72842027 Msa0223300:CDS
AGTTGGTGGCGATTGAAGAA+TGG 0.421149 2_1:+72838637 None:intergenic
GGTGGTGGACATGGTGGTGG+TGG 0.421380 2_1:-72842315 Msa0223300:CDS
TCACTAGTCTCATCAGGCCT+TGG 0.424601 2_1:+72841025 None:intergenic
GGCGATTGAAGAATGGGAAC+TGG 0.425859 2_1:+72838644 None:intergenic
AACACCTTTAATATTGAAGC+AGG 0.427152 2_1:-72841106 Msa0223300:CDS
ACTGGTGGTGGACATGGTGG+TGG 0.430184 2_1:-72842318 Msa0223300:CDS
CTTCCTCCACAGACATCAAC+TGG 0.431035 2_1:+72838596 None:intergenic
GACGGCAATGGCAGCGGCGG+AGG 0.431131 2_1:+72842377 None:intergenic
GGAAGTAATGGTGGCAGTGG+TGG 0.431759 2_1:-72842291 Msa0223300:CDS
TGGTGGCCCTTATTCTGTAA+GGG 0.436401 2_1:-72838482 Msa0223300:CDS
CACAGCTTGCAGCTGAGTTA+CGG 0.437484 2_1:-72838325 Msa0223300:intron
GGCGCAACTACAGAAGGAAT+TGG 0.439427 2_1:-72841989 Msa0223300:CDS
AATGGCAGCGGCGGAGGAAA+CGG 0.440792 2_1:+72842383 None:intergenic
ATTGGATTAACAGCTGCGTC+CGG 0.441537 2_1:-72841131 Msa0223300:intron
CCTACCAGCCTCGGTGGTAC+TGG 0.441855 2_1:-72840160 Msa0223300:CDS
AATTGAATAGTTATATTGAC+AGG 0.454818 2_1:+72842147 None:intergenic
CAAGGTTCATCTTATGGTGT+TGG 0.455140 2_1:-72838194 Msa0223300:CDS
CCTCCCTCACTAGTCTCATC+AGG 0.456399 2_1:+72841019 None:intergenic
AACGGCGACGGTGGCGGTGA+GGG 0.457185 2_1:+72842401 None:intergenic
GGAGGTTGGTGGTTTGGAGG+AGG 0.457441 2_1:-72842267 Msa0223300:CDS
GGTGGTGGTGGTGGAAGTAA+TGG 0.462440 2_1:-72842303 Msa0223300:CDS
GTTGGTGGCGATTGAAGAAT+GGG 0.462764 2_1:+72838638 None:intergenic
TGTTGGTGCCAAGCTTGGTT+TGG 0.462992 2_1:-72838177 Msa0223300:CDS
TGCTCTGACCAAACCAAGCT+TGG 0.463681 2_1:+72838169 None:intergenic
GTTCAGTTCATTGATAAGCT+TGG 0.463790 2_1:-72841496 Msa0223300:CDS
CTTGTCCTCCATGGCCGCTA+TGG 0.467464 2_1:-72838547 Msa0223300:CDS
CTGAGGGTTGAAGAAGTTGC+TGG 0.470561 2_1:+72840708 None:intergenic
TTTGGAGGAGGAAACGGAGG+AGG 0.471711 2_1:-72842255 Msa0223300:CDS
GTGTTGCCGTAGAGGAAAAC+GGG 0.473372 2_1:+72842342 None:intergenic
TTTGAAGACACGGCGGCGAC+GGG 0.474675 2_1:+72842425 None:intergenic
GGATGATCTTGCATTTAAGA+TGG 0.475394 2_1:-72840577 Msa0223300:CDS
CGGCCATGGAGGACAAGAAC+TGG 0.475573 2_1:+72838553 None:intergenic
CAGAAGTGGTATCATGATCA+AGG 0.480113 2_1:-72841610 Msa0223300:CDS
TTTGCGACGGCCGGACAAGA+TGG 0.480747 2_1:+72842497 None:intergenic
GTTGATCATAACTCAGGAAC+TGG 0.481477 2_1:-72838137 Msa0223300:CDS
TATGGTGTTGGTGCCAAGCT+TGG 0.481755 2_1:-72838182 Msa0223300:CDS
GGTTACAACATGGGTGAACT+TGG 0.484076 2_1:-72838460 Msa0223300:CDS
GGAGGAAACGGCGACGGTGG+CGG 0.484981 2_1:+72842395 None:intergenic
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 2_1:-72841641 Msa0223300:CDS
ACATGAAGAGTTCGGTTTCG+TGG 0.486346 2_1:+72840519 None:intergenic
TGAAATTAAGGTAAAAGAGA+TGG 0.486682 2_1:-72840987 Msa0223300:CDS
GGAAGCTCTCTATGTATCAC+AGG 0.487037 2_1:+72841445 None:intergenic
CACAACCACCATAGCGGCCA+TGG 0.488369 2_1:+72838539 None:intergenic
GGTGGAAGTAATGGTGGCAG+TGG 0.488956 2_1:-72842294 Msa0223300:CDS
GTTCAGGCCTCACTTCAACC+TGG 0.489926 2_1:-72840799 Msa0223300:intron
GGTGTTGCCGTAGAGGAAAA+CGG 0.489984 2_1:+72842341 None:intergenic
GGTGAAACAGTATTTGAGTC+AGG 0.490823 2_1:-72841770 Msa0223300:CDS
TCTGAAGAATTTGATTCTCA+TGG 0.491097 2_1:-72842174 Msa0223300:CDS
ACGGCGACGGTGGCGGTGAG+GGG 0.492240 2_1:+72842402 None:intergenic
TTGGATAGTTTGACATCTAG+TGG 0.493950 2_1:-72841970 Msa0223300:CDS
GTTGGATACCCTCCACGTCC+AGG 0.494002 2_1:+72840923 None:intergenic
GTTTGAAGACACGGCGGCGA+CGG 0.494402 2_1:+72842424 None:intergenic
TGGATTCTGCAATGATCCCT+TGG 0.494510 2_1:+72837895 None:intergenic
TTTGTGAATGGAGCTGTAGT+TGG 0.494735 2_1:-72840085 Msa0223300:CDS
ATTCGCCTATAGACTTCTGT+AGG 0.494760 2_1:+72838221 None:intergenic
CCGCCAGTTCTTGTCCTCCA+TGG 0.495151 2_1:-72838556 Msa0223300:CDS
TACGGCAACACCACTGGTGG+TGG 0.496015 2_1:-72842330 Msa0223300:CDS
GAGAGCAGTTGATGCATTGA+GGG 0.496333 2_1:+72842454 None:intergenic
GAGGGAGTATAAGAGGAGGA+TGG 0.496741 2_1:-72841746 Msa0223300:CDS
GGAACCCTACAGAAGTCTAT+AGG 0.496842 2_1:-72838226 Msa0223300:CDS
TTCCTCTACGGCAACACCAC+TGG 0.497773 2_1:-72842336 Msa0223300:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.498736 2_1:-72838470 Msa0223300:CDS
AACAGCTTACATGAAGAGTT+CGG 0.499486 2_1:+72840511 None:intergenic
TGAGAGCAGTTGATGCATTG+AGG 0.500721 2_1:+72842453 None:intergenic
GTTAAAGGCATGCATGTGTA+TGG 0.502109 2_1:-72838296 Msa0223300:CDS
TGTAACCCCTTACAGAATAA+GGG 0.504000 2_1:+72838476 None:intergenic
TTCGGCGGCACCATCTTGTC+CGG 0.504504 2_1:-72842507 Msa0223300:CDS
AAGTTTCGTTGTATTAATGT+TGG 0.504797 2_1:-72841850 Msa0223300:CDS
TGGGTATGATGAGGAAAGAA+AGG 0.507440 2_1:-72841675 Msa0223300:CDS
ATATCAGAATCCAACTCAAT+CGG 0.509396 2_1:+72841808 None:intergenic
CGATGGAACTGTTGGAATCA+CGG 0.511659 2_1:-72841908 Msa0223300:CDS
GATGGTGCCGCCGAAGTTGT+TGG 0.515685 2_1:+72842515 None:intergenic
AACACCACTGGTGGTGGACA+TGG 0.516543 2_1:-72842324 Msa0223300:CDS
AATGGTGGCAGTGGTGGTGG+AGG 0.516851 2_1:-72842285 Msa0223300:CDS
TTGAAAAGGTTGATCTTGAA+GGG 0.520120 2_1:-72841942 Msa0223300:CDS
TGGAGCGAGAAATATGTTCC+AGG 0.520832 2_1:-72840065 Msa0223300:intron
CAGAAGTACAATACCAGAGT+TGG 0.521701 2_1:+72840905 None:intergenic
TGCAAACTGCAGGTAGATCA+AGG 0.522633 2_1:-72838682 Msa0223300:intron
ACAAATGCCGATGGAACTGT+TGG 0.524279 2_1:-72841916 Msa0223300:CDS
GGTGGTGGTGGAAGTAATGG+TGG 0.524691 2_1:-72842300 Msa0223300:CDS
ACAGAAGTCTATAGGCGAAT+GGG 0.524829 2_1:-72838218 Msa0223300:CDS
CGGCTGATGTCAGTACTGAA+TGG 0.529553 2_1:-72840955 Msa0223300:CDS
CGGTGAGGGGTTTGAAGACA+CGG 0.531059 2_1:+72842415 None:intergenic
AACGGGTTTGTTAGAGTGGA+CGG 0.532988 2_1:+72842359 None:intergenic
GTAGATCAAGGCCTAGGCAT+TGG 0.533049 2_1:-72838670 Msa0223300:CDS
GGTGGCCCTTATTCTGTAAG+GGG 0.535538 2_1:-72838481 Msa0223300:CDS
GTTGTTTGTGAGGTTGTTGA+AGG 0.535781 2_1:-72841538 Msa0223300:CDS
CTCGTTCCATCCAACAACTT+CGG 0.537018 2_1:-72842525 Msa0223300:CDS
AATGCCAGTACCACCGAGGC+TGG 0.537268 2_1:+72840156 None:intergenic
GGAAGTTCAAAGGATGTCAA+AGG 0.537541 2_1:-72838248 Msa0223300:CDS
AGAGTGGACGGCAATGGCAG+CGG 0.537605 2_1:+72842371 None:intergenic
GTCTATAGGCGAATGGGTCA+AGG 0.538287 2_1:-72838212 Msa0223300:CDS
GTATAAGAGGAGGATGGAGA+AGG 0.538995 2_1:-72841740 Msa0223300:CDS
AGAGTAAAAGCATCATAACT+TGG 0.539501 2_1:+72838505 None:intergenic
GCAGACAAAGCCGATTGAGT+TGG 0.539592 2_1:-72841818 Msa0223300:CDS
TACCAAAGAGGTTGTTTGTG+AGG 0.542702 2_1:-72841548 Msa0223300:CDS
CACCAGTGGTGTTGCCGTAG+AGG 0.545329 2_1:+72842334 None:intergenic
TTGGATTAACAGCTGCGTCC+GGG 0.545816 2_1:-72841130 Msa0223300:intron
AGGGTATGCTTGTGCTTCAG+TGG 0.546401 2_1:-72841590 Msa0223300:CDS
GGAAAACGGGTTTGTTAGAG+TGG 0.546885 2_1:+72842355 None:intergenic
TGGTGCTGCCAGAAACATGC+TGG 0.547041 2_1:-72838440 Msa0223300:CDS
TACAGAAGTCTATAGGCGAA+TGG 0.548050 2_1:-72838219 Msa0223300:CDS
CCAGTACCACCGAGGCTGGT+AGG 0.550717 2_1:+72840160 None:intergenic
CTGATATGACTGAGAAGGAG+AGG 0.551839 2_1:-72841792 Msa0223300:CDS
ATCTAGTGGAATGTTTGAAA+AGG 0.552613 2_1:-72841956 Msa0223300:CDS
GTCCTCCATGGCCGCTATGG+TGG 0.553018 2_1:-72838544 Msa0223300:CDS
AGAGGAGGATGGAGAAGGCT+AGG 0.553607 2_1:-72841735 Msa0223300:CDS
GGCGGAGGAAACGGCGACGG+TGG 0.554681 2_1:+72842392 None:intergenic
GAAGTTCAAAGGATGTCAAA+GGG 0.555525 2_1:-72838247 Msa0223300:CDS
GATGGACCTCCTACCAGCCT+CGG 0.558209 2_1:-72840169 Msa0223300:CDS
CTGCAGGTAGATCAAGGCCT+AGG 0.558852 2_1:-72838676 Msa0223300:intron
ACGTGGAGGGTATCCAACTC+TGG 0.559551 2_1:-72840918 Msa0223300:intron
TGGAAATCTTAATACCAAAG+AGG 0.562046 2_1:-72841560 Msa0223300:CDS
TTTGTTAGAGTGGACGGCAA+TGG 0.562349 2_1:+72842365 None:intergenic
GTTGATGCATTGAGGGAGAG+AGG 0.563859 2_1:+72842461 None:intergenic
TTGATGCATTGAGGGAGAGA+GGG 0.564365 2_1:+72842462 None:intergenic
GCCCTTGTGTAAACTCCGCC+CGG 0.565154 2_1:+72842009 None:intergenic
AAGCTTGGCAATGTTGTTGA+AGG 0.565864 2_1:-72841481 Msa0223300:CDS
GGAACTGGGTGCCAATGCCT+AGG 0.567234 2_1:+72838659 None:intergenic
CATGGAGGACAAGAACTGGC+GGG 0.567265 2_1:+72838557 None:intergenic
GTTTATCCAGTTGATGTCTG+TGG 0.574004 2_1:-72838602 Msa0223300:CDS
CACAAGGGCGCAACTACAGA+AGG 0.574798 2_1:-72841995 Msa0223300:CDS
TCATCAGCAATAGCTGCTGC+CGG 0.576186 2_1:+72842204 None:intergenic
TTCCGGGCGGAGTTTACACA+AGG 0.577272 2_1:-72842011 Msa0223300:CDS
AAGACACGGCGGCGACGGGA+AGG 0.577840 2_1:+72842429 None:intergenic
GGACTGAATAGAGCTCTTAG+TGG 0.577947 2_1:-72840742 Msa0223300:CDS
AGCGGCGGAGGAAACGGCGA+CGG 0.578205 2_1:+72842389 None:intergenic
CAGCAACTTCTTCAACCCTC+AGG 0.579110 2_1:-72840707 Msa0223300:intron
GGATGGAACGAGAGAAGACA+TGG 0.579164 2_1:+72842536 None:intergenic
AGGAGAGGGAGTATAAGAGG+AGG 0.581109 2_1:-72841750 Msa0223300:CDS
TTTGAGCATCGGAATCTGCA+AGG 0.581527 2_1:-72840763 Msa0223300:CDS
ACGGTATTCGGCAAAATACA+CGG 0.581738 2_1:+72841712 None:intergenic
CGTGATTCCAACAGTTCCAT+CGG 0.582065 2_1:+72841909 None:intergenic
AACAGTATTTGAGTCAGGAG+AGG 0.582697 2_1:-72841765 Msa0223300:CDS
CGAATATTGAGGTTAATCCA+AGG 0.584035 2_1:-72841042 Msa0223300:CDS
TTGGATACCCTCCACGTCCA+GGG 0.585173 2_1:+72840924 None:intergenic
ACTGAATGGAGTATTATCCC+TGG 0.586150 2_1:-72840941 Msa0223300:CDS
CAGTTGATGTCTGTGGAGGA+AGG 0.588557 2_1:-72838595 Msa0223300:CDS
ACATAGAGAGCTTCCCAAAG+AGG 0.590094 2_1:-72841437 Msa0223300:intron
TGGTTTGGAGGAGGAAACGG+AGG 0.591098 2_1:-72842258 Msa0223300:CDS
CTCTACGGCAACACCACTGG+TGG 0.591852 2_1:-72842333 Msa0223300:CDS
ATGTCTGTGGAGGAAGGAGC+TGG 0.592623 2_1:-72838589 Msa0223300:CDS
AAACGGCGACGGTGGCGGTG+AGG 0.592870 2_1:+72842400 None:intergenic
TTCATATAGTGAGAGTACTT+GGG 0.593668 2_1:-72841884 Msa0223300:CDS
TGGAGTATTATCCCTGGACG+TGG 0.594319 2_1:-72840935 Msa0223300:CDS
ACCCATAATCTCCAAATGAA+CGG 0.594361 2_1:+72841693 None:intergenic
GGGATCATTGCAGAATCCAC+AGG 0.594493 2_1:-72837891 Msa0223300:three_prime_UTR
GTGGACGGCAATGGCAGCGG+CGG 0.594818 2_1:+72842374 None:intergenic
GGATTCTGATATGACTGAGA+AGG 0.595424 2_1:-72841797 Msa0223300:CDS
GCGATTGAAGAATGGGAACT+GGG 0.595882 2_1:+72838645 None:intergenic
GGCCGCTATGGTGGTTGTGT+AGG 0.596201 2_1:-72838535 Msa0223300:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.597256 2_1:-72838469 Msa0223300:CDS
TGGAGGACAAGAACTGGCGG+GGG 0.598639 2_1:+72838559 None:intergenic
ACCGTGTCAGAGTTAGTTGG+TGG 0.599851 2_1:+72838623 None:intergenic
GGTGGTGGAATTAGTGCAGA+TGG 0.600249 2_1:-72840187 Msa0223300:CDS
TATGGTGTCAGTTGTTCCTG+TGG 0.600323 2_1:+72837875 None:intergenic
TGGTACTGGCATTGATCACA+TGG 0.604743 2_1:-72840146 Msa0223300:CDS
TATGCACATCCATATTTGGA+TGG 0.605774 2_1:-72840552 Msa0223300:CDS
ACAGTATTTGAGTCAGGAGA+GGG 0.607068 2_1:-72841764 Msa0223300:CDS
CAAAGAGTACTACCTGGTGG+TGG 0.609512 2_1:-72840202 Msa0223300:CDS
GTGCCGCCGAAGTTGTTGGA+TGG 0.609553 2_1:+72842519 None:intergenic
TAAACCGTGTCAGAGTTAGT+TGG 0.610131 2_1:+72838620 None:intergenic
TTCGCCTATAGACTTCTGTA+GGG 0.610421 2_1:+72838222 None:intergenic
AACTCAATCGGCTTTGTCTG+CGG 0.610651 2_1:+72841820 None:intergenic
GTACCACCGAGGCTGGTAGG+AGG 0.612805 2_1:+72840163 None:intergenic
TGGAGATTATGGGTATGATG+AGG 0.614636 2_1:-72841684 Msa0223300:CDS
ATGGAGGACAAGAACTGGCG+GGG 0.616107 2_1:+72838558 None:intergenic
GTATTATCCCTGGACGTGGA+GGG 0.616682 2_1:-72840931 Msa0223300:CDS
ACCACCATGTCCACCACCAG+TGG 0.617417 2_1:+72842320 None:intergenic
ACCACTGGTGGTGGACATGG+TGG 0.617692 2_1:-72842321 Msa0223300:CDS
AAAAGAGATGGATCAGAAGA+CGG 0.620917 2_1:-72840975 Msa0223300:CDS
AGTATTATCCCTGGACGTGG+AGG 0.623139 2_1:-72840932 Msa0223300:CDS
CCATGGAGGACAAGAACTGG+CGG 0.627462 2_1:+72838556 None:intergenic
CTACTAGTCTAGTATTAGCA+CGG 0.628634 2_1:+72838014 None:intergenic
GAATGATCTAGGAAGTTCAA+AGG 0.628689 2_1:-72838258 Msa0223300:CDS
AGAAGTGGTATCATGATCAA+GGG 0.628769 2_1:-72841609 Msa0223300:CDS
TATCCAGTTGATGTCTGTGG+AGG 0.628813 2_1:-72838599 Msa0223300:CDS
AGGCCTGATGAGACTAGTGA+GGG 0.628874 2_1:-72841022 Msa0223300:CDS
GAAGGGAAGACAAATGCCGA+TGG 0.629741 2_1:-72841925 Msa0223300:CDS
TATGCCGTTGATCATAACTC+AGG 0.630071 2_1:-72838143 Msa0223300:CDS
GAAGCTCTCTATGTATCACA+GGG 0.631275 2_1:+72841446 None:intergenic
TGATATGACTGAGAAGGAGA+GGG 0.631555 2_1:-72841791 Msa0223300:CDS
TTAGGGATAAGGTTCAGAAG+TGG 0.635116 2_1:-72841624 Msa0223300:CDS
GAGATAACAACTCGTGACGA+AGG 0.635863 2_1:-72840247 Msa0223300:CDS
CAGGCCTCACTTCAACCTGG+TGG 0.639154 2_1:-72840796 Msa0223300:CDS
TCAATATTAAAGGTGTTACC+CGG 0.639699 2_1:+72841112 None:intergenic
ACACCTTTAATATTGAAGCA+GGG 0.649166 2_1:-72841105 Msa0223300:CDS
ATATAGTGAGAGTACTTGGG+AGG 0.649290 2_1:-72841881 Msa0223300:CDS
AGTTCCTGAGTTATGATCAA+CGG 0.653436 2_1:+72838139 None:intergenic
TCAAAAGAAATAGTTCCACC+AGG 0.657409 2_1:+72840781 None:intergenic
AAGGCCTGATGAGACTAGTG+AGG 0.658789 2_1:-72841023 Msa0223300:CDS
CCTGATGAGACTAGTGAGGG+AGG 0.666702 2_1:-72841019 Msa0223300:CDS
ATTCAATTGAACAAACTCAG+TGG 0.672368 2_1:-72842132 Msa0223300:CDS
GTTCCATCCAACAACTTCGG+CGG 0.677116 2_1:-72842522 Msa0223300:CDS
AGTTCCACCAGGTTGAAGTG+AGG 0.678160 2_1:+72840792 None:intergenic
GCCACCAACTAACTCTGACA+CGG 0.681112 2_1:-72838624 Msa0223300:CDS
AATGGTCAAAGAGTACTACC+TGG 0.681459 2_1:-72840208 Msa0223300:CDS
TCCGGGCGGAGTTTACACAA+GGG 0.682002 2_1:-72842010 Msa0223300:CDS
CGCCTACACAACCACCATAG+CGG 0.696532 2_1:+72838533 None:intergenic
AACCACCATAGCGGCCATGG+AGG 0.698443 2_1:+72838542 None:intergenic
TCTGCACTAATTCCACCACC+AGG 0.699846 2_1:+72840190 None:intergenic
GGACCTCCTACCAGCCTCGG+TGG 0.704909 2_1:-72840166 Msa0223300:CDS
ATGATTTCTATTGTTCCGGG+CGG 0.716023 2_1:-72842024 Msa0223300:CDS
CCATAAGTGAATTTACTCTG+TGG 0.720329 2_1:+72840283 None:intergenic
GGTCAAAGAGTACTACCTGG+TGG 0.755451 2_1:-72840205 Msa0223300:CDS
TGCTGCCAGAAACATGCTGG+AGG 0.768164 2_1:-72838437 Msa0223300:intron
GATCAATGCCAGTACCACCG+AGG 0.774073 2_1:+72840152 None:intergenic
TGAGGGGTTTGAAGACACGG+CGG 0.801528 2_1:+72842418 None:intergenic
AAGCTCTCTATGTATCACAG+GGG 0.819683 2_1:+72841447 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAAATATATTTTTAA+AGG - chr2_1:72841609-72841628 Msa0223300:CDS 0.0%
!!! TTTATATAAAATCAATTTTG+TGG + chr2_1:72841582-72841601 None:intergenic 10.0%
!!! GTTTTTAAATTACATTTTTT+TGG - chr2_1:72842390-72842409 Msa0223300:CDS 10.0%
!! ATATTATATTATACCTCTTT+GGG + chr2_1:72839018-72839037 None:intergenic 15.0%
!! AATATTATATTATACCTCTT+TGG + chr2_1:72839019-72839038 None:intergenic 15.0%
!! TTGTTATCTGTTATATATAT+GGG - chr2_1:72839069-72839088 Msa0223300:intron 15.0%
!!! AATAATTGATATTTCTAGTA+TGG - chr2_1:72839152-72839171 Msa0223300:intron 15.0%
!!! TATTTTTACATGAACTATTT+AGG - chr2_1:72840075-72840094 Msa0223300:CDS 15.0%
!! ATTGAAATGAAAAACATTTA+GGG + chr2_1:72840715-72840734 None:intergenic 15.0%
!! TAAATTCTAACAAAAGTAAT+AGG + chr2_1:72841209-72841228 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG + chr2_1:72841458-72841477 None:intergenic 15.0%
!! AACATAATTGATTACTAAAA+AGG - chr2_1:72841518-72841537 Msa0223300:CDS 15.0%
!!! CTAAAACAAAATTTTTAATG+TGG + chr2_1:72841635-72841654 None:intergenic 15.0%
!!! CACATTAAAAATTTTGTTTT+AGG - chr2_1:72841633-72841652 Msa0223300:CDS 15.0%
!! AATTGAATAGTTATATTGAC+AGG + chr2_1:72838295-72838314 None:intergenic 20.0%
!! GTTGTTATCTGTTATATATA+TGG - chr2_1:72839068-72839087 Msa0223300:intron 20.0%
!!! TGTTTTATCAATATTGATAC+TGG - chr2_1:72839808-72839827 Msa0223300:intron 20.0%
!! CATGTAAGCAAATAATAAAA+AGG + chr2_1:72840456-72840475 None:intergenic 20.0%
!!! CTTTTTATTATTTGCTTACA+TGG - chr2_1:72840454-72840473 Msa0223300:intron 20.0%
!! AAGGCTTAAAGATAATAAAA+AGG + chr2_1:72840490-72840509 None:intergenic 20.0%
!! ATACAATTATAAGAGGAAAA+AGG + chr2_1:72840509-72840528 None:intergenic 20.0%
!!! TTTTCCTCTTATAATTGTAT+TGG - chr2_1:72840509-72840528 Msa0223300:intron 20.0%
!! TTTACCAATACAATTATAAG+AGG + chr2_1:72840516-72840535 None:intergenic 20.0%
!! ACACAATTAGAAAATATACA+AGG + chr2_1:72840642-72840661 None:intergenic 20.0%
!! GATTGAAATGAAAAACATTT+AGG + chr2_1:72840716-72840735 None:intergenic 20.0%
!!! TTTTTTCACACATAATTTTG+AGG + chr2_1:72841432-72841451 None:intergenic 20.0%
!! CAAAATTATGTGTGAAAAAA+AGG - chr2_1:72841432-72841451 Msa0223300:intron 20.0%
!!! TTACATTTTTTTGGTTTAAG+TGG - chr2_1:72842399-72842418 Msa0223300:CDS 20.0%
!!! TACATTTTTTTGGTTTAAGT+GGG - chr2_1:72842400-72842419 Msa0223300:CDS 20.0%
! TGAAATGATTTCTATTGTTC+CGG - chr2_1:72838411-72838430 Msa0223300:intron 25.0%
! AAGTTTCGTTGTATTAATGT+TGG - chr2_1:72838589-72838608 Msa0223300:CDS 25.0%
! TTATCTGTTATATATATGGG+AGG - chr2_1:72839072-72839091 Msa0223300:intron 25.0%
! TCTTATTGTTGTCAATTTAG+AGG - chr2_1:72839105-72839124 Msa0223300:intron 25.0%
! CTTATTGTTGTCAATTTAGA+GGG - chr2_1:72839106-72839125 Msa0223300:intron 25.0%
! AGGCAAATAATCATTGAAAT+TGG + chr2_1:72839188-72839207 None:intergenic 25.0%
!!! TTCTTTGTTTTCGAATATTG+AGG - chr2_1:72839386-72839405 Msa0223300:intron 25.0%
! AGGCATAATTGTTGAAATTA+AGG - chr2_1:72839440-72839459 Msa0223300:intron 25.0%
! TGAAATTAAGGTAAAAGAGA+TGG - chr2_1:72839452-72839471 Msa0223300:intron 25.0%
!!! ATTGCTTTTCAATTTTGTTC+AGG - chr2_1:72839624-72839643 Msa0223300:intron 25.0%
! GGATATATAAGACTGAATAT+TGG + chr2_1:72840621-72840640 None:intergenic 25.0%
! AGAAAAAAATAGTCCATCAA+CGG + chr2_1:72840772-72840791 None:intergenic 25.0%
!! CAACTTTTATATTGATCCAA+AGG + chr2_1:72840884-72840903 None:intergenic 25.0%
! CTTTGGATCAATATAAAAGT+TGG - chr2_1:72840882-72840901 Msa0223300:intron 25.0%
!!! ATTTTGATCATTACAGCAAA+AGG + chr2_1:72841033-72841052 None:intergenic 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG - chr2_1:72841452-72841471 Msa0223300:CDS 25.0%
! GTCTTAAATAGAAAACATCA+GGG + chr2_1:72841680-72841699 None:intergenic 25.0%
! AGTCTTAAATAGAAAACATC+AGG + chr2_1:72841681-72841700 None:intergenic 25.0%
!! TTTTTATATATGCAAACTGC+AGG - chr2_1:72841747-72841766 Msa0223300:CDS 25.0%
! TGATAAAGAATCATAAAACG+AGG + chr2_1:72842041-72842060 None:intergenic 25.0%
TCTGAAGAATTTGATTCTCA+TGG - chr2_1:72838265-72838284 Msa0223300:CDS 30.0%
ATTCAATTGAACAAACTCAG+TGG - chr2_1:72838307-72838326 Msa0223300:CDS 30.0%
AAGAAGCGAAAAACAAAAGT+TGG - chr2_1:72838370-72838389 Msa0223300:intron 30.0%
GAAATGATTTCTATTGTTCC+GGG - chr2_1:72838412-72838431 Msa0223300:intron 30.0%
ATCTAGTGGAATGTTTGAAA+AGG - chr2_1:72838483-72838502 Msa0223300:CDS 30.0%
! TTTGAAAAGGTTGATCTTGA+AGG - chr2_1:72838496-72838515 Msa0223300:CDS 30.0%
! TTGAAAAGGTTGATCTTGAA+GGG - chr2_1:72838497-72838516 Msa0223300:CDS 30.0%
!! TTTCATATAGTGAGAGTACT+TGG - chr2_1:72838554-72838573 Msa0223300:CDS 30.0%
!! TTCATATAGTGAGAGTACTT+GGG - chr2_1:72838555-72838574 Msa0223300:CDS 30.0%
ATATCAGAATCCAACTCAAT+CGG + chr2_1:72838634-72838653 None:intergenic 30.0%
TGGAAATCTTAATACCAAAG+AGG - chr2_1:72838879-72838898 Msa0223300:intron 30.0%
TATATATATGGGAGGTTCAT+AGG - chr2_1:72839080-72839099 Msa0223300:intron 30.0%
CAATGATTATTTGCCTGTTT+AGG - chr2_1:72839192-72839211 Msa0223300:intron 30.0%
! TATTTGCCTGTTTAGGATAT+CGG - chr2_1:72839199-72839218 Msa0223300:intron 30.0%
TATATCCTAAAACTGCTCAT+TGG - chr2_1:72839256-72839275 Msa0223300:intron 30.0%
! TAAAACCAATGAGCAGTTTT+AGG + chr2_1:72839264-72839283 None:intergenic 30.0%
!! TCAATATTAAAGGTGTTACC+CGG + chr2_1:72839330-72839349 None:intergenic 30.0%
AACACCTTTAATATTGAAGC+AGG - chr2_1:72839333-72839352 Msa0223300:intron 30.0%
ACACCTTTAATATTGAAGCA+GGG - chr2_1:72839334-72839353 Msa0223300:intron 30.0%
AGAAAAAAAAAATCCCTTGG+TGG + chr2_1:72839586-72839605 None:intergenic 30.0%
AGCAGAAAAAAAAAATCCCT+TGG + chr2_1:72839589-72839608 None:intergenic 30.0%
!! GAACTATTTCTTTTGAGCAT+CGG - chr2_1:72839665-72839684 Msa0223300:intron 30.0%
TTATCTACACCATCCAAATA+TGG + chr2_1:72839899-72839918 None:intergenic 30.0%
TGTCAAAGCTAATATTACAG+AGG - chr2_1:72840033-72840052 Msa0223300:intron 30.0%
ACATGAACTATTTAGGCTAA+TGG - chr2_1:72840082-72840101 Msa0223300:CDS 30.0%
ATTCACTTATGGACTTGTAA+TGG - chr2_1:72840167-72840186 Msa0223300:CDS 30.0%
GGTAATCAAATTTGTGCAAA+TGG - chr2_1:72840213-72840232 Msa0223300:CDS 30.0%
! ACTTTAAAGACAGTTAGTGA+CGG + chr2_1:72840412-72840431 None:intergenic 30.0%
!! TGTCTTTAAAGTTGCATACA+TGG - chr2_1:72840420-72840439 Msa0223300:intron 30.0%
GTAGTCACATAAAACAAGAT+AGG + chr2_1:72840539-72840558 None:intergenic 30.0%
! AAAGTATCACTCAGGTTAAA+AGG + chr2_1:72840676-72840695 None:intergenic 30.0%
ATCATCCTATTTAGATCCTA+TGG - chr2_1:72840733-72840752 Msa0223300:CDS 30.0%
GTTAACCATAGGATCTAAAT+AGG + chr2_1:72840741-72840760 None:intergenic 30.0%
GTAAACCTATCTACAAAGAT+AGG - chr2_1:72840908-72840927 Msa0223300:intron 30.0%
! CCTTTTCCATTATATGATGT+CGG - chr2_1:72841254-72841273 Msa0223300:intron 30.0%
! ACAAGATATCTATGTTTTCC+AGG - chr2_1:72841366-72841385 Msa0223300:intron 30.0%
! CAAGATATCTATGTTTTCCA+GGG - chr2_1:72841367-72841386 Msa0223300:intron 30.0%
AAAAAGGCTTCAATTACTCT+TGG - chr2_1:72841534-72841553 Msa0223300:CDS 30.0%
!! TAATCAGAAAGTATTGTCAC+AGG + chr2_1:72841722-72841741 None:intergenic 30.0%
!! AGAGTAAAAGCATCATAACT+TGG + chr2_1:72841937-72841956 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG - chr2_1:72841937-72841956 Msa0223300:CDS 30.0%
! GGTGCATTATATTTACGTTT+TGG - chr2_1:72842323-72842342 Msa0223300:CDS 30.0%
!!! TATATTTACGTTTTGGAGAG+AGG - chr2_1:72842330-72842349 Msa0223300:CDS 30.0%
!! GACTTGTTTTCTTTAGTACT+TGG - chr2_1:72842447-72842466 Msa0223300:CDS 30.0%
TTCTTTAGTACTTGGAGAAT+TGG - chr2_1:72842455-72842474 Msa0223300:CDS 30.0%
CTGATTGTCTTGATATTTGA+TGG - chr2_1:72842507-72842526 Msa0223300:CDS 30.0%
!!! GTTTGTTGTTGTTTTTGCGA+CGG + chr2_1:72837958-72837977 None:intergenic 35.0%
!!! TTGGTCTAGGTTTTTTACTC+CGG - chr2_1:72838216-72838235 Msa0223300:CDS 35.0%
TTGGATAGTTTGACATCTAG+TGG - chr2_1:72838469-72838488 Msa0223300:CDS 35.0%
ATCTCCAAATGAACGGTATT+CGG + chr2_1:72838742-72838761 None:intergenic 35.0%
TACCGTTCATTTGGAGATTA+TGG - chr2_1:72838744-72838763 Msa0223300:intron 35.0%
ACCGTTCATTTGGAGATTAT+GGG - chr2_1:72838745-72838764 Msa0223300:intron 35.0%
ACCCATAATCTCCAAATGAA+CGG + chr2_1:72838749-72838768 None:intergenic 35.0%
TAGGTTGTTGCAGAAGATTA+GGG - chr2_1:72838798-72838817 Msa0223300:intron 35.0%
AGAAGTGGTATCATGATCAA+GGG - chr2_1:72838830-72838849 Msa0223300:intron 35.0%
! TGTGCTTCAGTGGTTAATTT+TGG - chr2_1:72838859-72838878 Msa0223300:intron 35.0%
GTTCAGTTCATTGATAAGCT+TGG - chr2_1:72838943-72838962 Msa0223300:intron 35.0%
! ATTTGCCTGTTTAGGATATC+GGG - chr2_1:72839200-72839219 Msa0223300:intron 35.0%
!!! GGTTTTAGTTACTCACTTGA+TGG - chr2_1:72839277-72839296 Msa0223300:intron 35.0%
! CACTTGATGGATGTTTGTAT+TGG - chr2_1:72839290-72839309 Msa0223300:intron 35.0%
CTTCCCTGCTTCAATATTAA+AGG + chr2_1:72839340-72839359 None:intergenic 35.0%
CGAATATTGAGGTTAATCCA+AGG - chr2_1:72839397-72839416 Msa0223300:intron 35.0%
AAAAGAGATGGATCAGAAGA+CGG - chr2_1:72839464-72839483 Msa0223300:intron 35.0%
! TCAATTTTCTACAACCACCA+AGG - chr2_1:72839569-72839588 Msa0223300:intron 35.0%
! CAATTTTCTACAACCACCAA+GGG - chr2_1:72839570-72839589 Msa0223300:intron 35.0%
TCAAAAGAAATAGTTCCACC+AGG + chr2_1:72839661-72839680 None:intergenic 35.0%
! TTTCCTTCATGTTTTCTGCT+AGG - chr2_1:72839841-72839860 Msa0223300:intron 35.0%
GGATGATCTTGCATTTAAGA+TGG - chr2_1:72839862-72839881 Msa0223300:intron 35.0%
TATGCACATCCATATTTGGA+TGG - chr2_1:72839887-72839906 Msa0223300:intron 35.0%
AACAGCTTACATGAAGAGTT+CGG + chr2_1:72839931-72839950 None:intergenic 35.0%
CCATAAGTGAATTTACTCTG+TGG + chr2_1:72840159-72840178 None:intergenic 35.0%
CCACAGAGTAAATTCACTTA+TGG - chr2_1:72840156-72840175 Msa0223300:CDS 35.0%
! GATAACACACGTTTTGTGAA+TGG - chr2_1:72840342-72840361 Msa0223300:intron 35.0%
! TTAACATTTTCCTCCGTTGA+TGG - chr2_1:72840756-72840775 Msa0223300:CDS 35.0%
AAAAAATAGTCCATCAACGG+AGG + chr2_1:72840769-72840788 None:intergenic 35.0%
ACTTGTCTAGTTGTATCCTT+TGG - chr2_1:72840865-72840884 Msa0223300:intron 35.0%
CTACTCCTATCTTTGTAGAT+AGG + chr2_1:72840916-72840935 None:intergenic 35.0%
TACAAAGATAGGAGTAGTAG+AGG - chr2_1:72840919-72840938 Msa0223300:CDS 35.0%
ACAAAGATAGGAGTAGTAGA+GGG - chr2_1:72840920-72840939 Msa0223300:CDS 35.0%
TAGTCTATAGTGTGCTATAG+CGG - chr2_1:72840967-72840986 Msa0223300:CDS 35.0%
! CCGACATCATATAATGGAAA+AGG + chr2_1:72841257-72841276 None:intergenic 35.0%
AAGTAGCCGACATCATATAA+TGG + chr2_1:72841263-72841282 None:intergenic 35.0%
! ATTATATGATGTCGGCTACT+TGG - chr2_1:72841262-72841281 Msa0223300:intron 35.0%
AATGTGTAGTTAGAGCTCAA+TGG + chr2_1:72841299-72841318 None:intergenic 35.0%
TCAGTGAACACTTCAATTCA+TGG - chr2_1:72841320-72841339 Msa0223300:intron 35.0%
CATAGATATCTTGTCCTCAA+AGG + chr2_1:72841360-72841379 None:intergenic 35.0%
TAAATAGAAAACATCAGGGC+CGG + chr2_1:72841676-72841695 None:intergenic 35.0%
! TATGATGCTTTTACTCTTGG+TGG - chr2_1:72841940-72841959 Msa0223300:CDS 35.0%
TGTAACCCCTTACAGAATAA+GGG + chr2_1:72841966-72841985 None:intergenic 35.0%
TTGTAACCCCTTACAGAATA+AGG + chr2_1:72841967-72841986 None:intergenic 35.0%
GAATGATCTAGGAAGTTCAA+AGG - chr2_1:72842181-72842200 Msa0223300:CDS 35.0%
GAAGTTCAAAGGATGTCAAA+GGG - chr2_1:72842192-72842211 Msa0223300:CDS 35.0%
AGTTCCTGAGTTATGATCAA+CGG + chr2_1:72842303-72842322 None:intergenic 35.0%
! CTACTAGTCTAGTATTAGCA+CGG + chr2_1:72842428-72842447 None:intergenic 35.0%
!!! TGGTTTTTATTTTTGCGCCA+AGG - chr2_1:72842527-72842546 Msa0223300:CDS 35.0%
!!! GGTTTTTATTTTTGCGCCAA+GGG - chr2_1:72842528-72842547 Msa0223300:CDS 35.0%
! AACAAACCCGTTTTCCTCTA+CGG - chr2_1:72838091-72838110 Msa0223300:exon 40.0%
ATGATTTCTATTGTTCCGGG+CGG - chr2_1:72838415-72838434 Msa0223300:intron 40.0%
!! ATATAGTGAGAGTACTTGGG+AGG - chr2_1:72838558-72838577 Msa0223300:CDS 40.0%
GGATTCTGATATGACTGAGA+AGG - chr2_1:72838642-72838661 Msa0223300:CDS 40.0%
TGATATGACTGAGAAGGAGA+GGG - chr2_1:72838648-72838667 Msa0223300:CDS 40.0%
GGTGAAACAGTATTTGAGTC+AGG - chr2_1:72838669-72838688 Msa0223300:CDS 40.0%
AACAGTATTTGAGTCAGGAG+AGG - chr2_1:72838674-72838693 Msa0223300:intron 40.0%
ACAGTATTTGAGTCAGGAGA+GGG - chr2_1:72838675-72838694 Msa0223300:intron 40.0%
ACGGTATTCGGCAAAATACA+CGG + chr2_1:72838730-72838749 None:intergenic 40.0%
TTTGCCGAATACCGTTCATT+TGG - chr2_1:72838735-72838754 Msa0223300:intron 40.0%
TGGAGATTATGGGTATGATG+AGG - chr2_1:72838755-72838774 Msa0223300:intron 40.0%
TGGGTATGATGAGGAAAGAA+AGG - chr2_1:72838764-72838783 Msa0223300:intron 40.0%
AAGAAAGGAGTTTGAGTGCT+AGG - chr2_1:72838779-72838798 Msa0223300:intron 40.0%
CTAGGTTGTTGCAGAAGATT+AGG - chr2_1:72838797-72838816 Msa0223300:intron 40.0%
GTTGCAGAAGATTAGGGATA+AGG - chr2_1:72838804-72838823 Msa0223300:intron 40.0%
TTAGGGATAAGGTTCAGAAG+TGG - chr2_1:72838815-72838834 Msa0223300:intron 40.0%
CAGAAGTGGTATCATGATCA+AGG - chr2_1:72838829-72838848 Msa0223300:intron 40.0%
TACCAAAGAGGTTGTTTGTG+AGG - chr2_1:72838891-72838910 Msa0223300:intron 40.0%
AACCTCACAAACAACCTCTT+TGG + chr2_1:72838896-72838915 None:intergenic 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG - chr2_1:72838901-72838920 Msa0223300:intron 40.0%
AAGCTTGGCAATGTTGTTGA+AGG - chr2_1:72838958-72838977 Msa0223300:intron 40.0%
AAGCTCTCTATGTATCACAG+GGG + chr2_1:72838995-72839014 None:intergenic 40.0%
GAAGCTCTCTATGTATCACA+GGG + chr2_1:72838996-72839015 None:intergenic 40.0%
AACAACCCGATATCCTAAAC+AGG + chr2_1:72839208-72839227 None:intergenic 40.0%
! ACTGAATGGAGTATTATCCC+TGG - chr2_1:72839498-72839517 Msa0223300:intron 40.0%
! CAGAAGTACAATACCAGAGT+TGG + chr2_1:72839537-72839556 None:intergenic 40.0%
! GAAGAAGTTGCTGGTTGTTA+TGG + chr2_1:72839725-72839744 None:intergenic 40.0%
AATGAAGAATCTCAGCAGAC+TGG + chr2_1:72839768-72839787 None:intergenic 40.0%
CATCCTAGCAGAAAACATGA+AGG + chr2_1:72839847-72839866 None:intergenic 40.0%
GGAGTATGCACATCCATATT+TGG - chr2_1:72839883-72839902 Msa0223300:intron 40.0%
TGAATACTGGACTCAGCTTT+CGG + chr2_1:72839961-72839980 None:intergenic 40.0%
!! AATGGTCAAAGAGTACTACC+TGG - chr2_1:72840231-72840250 Msa0223300:CDS 40.0%
TTTGTGAATGGAGCTGTAGT+TGG - chr2_1:72840354-72840373 Msa0223300:intron 40.0%
!! GCTAGAGAAAAGTATCACTC+AGG + chr2_1:72840684-72840703 None:intergenic 40.0%
CGGAGGAAAATGTTAACCAT+AGG + chr2_1:72840752-72840771 None:intergenic 40.0%
! ATATCTATGTTTTCCAGGGC+CGG - chr2_1:72841371-72841390 Msa0223300:intron 40.0%
! TTTTAGGCCTCTTAGTCTCT+AGG - chr2_1:72841649-72841668 Msa0223300:CDS 40.0%
TTTAGGCCTCTTAGTCTCTA+GGG - chr2_1:72841650-72841669 Msa0223300:CDS 40.0%
TAAACCGTGTCAGAGTTAGT+TGG + chr2_1:72841822-72841841 None:intergenic 40.0%
! GTTTATCCAGTTGATGTCTG+TGG - chr2_1:72841837-72841856 Msa0223300:CDS 40.0%
TTCTGTAAGGGGTTACAACA+TGG - chr2_1:72841969-72841988 Msa0223300:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG - chr2_1:72841970-72841989 Msa0223300:CDS 40.0%
GAGTTACGGATACCTGTTAA+AGG - chr2_1:72842128-72842147 Msa0223300:CDS 40.0%
TACACATGCATGCCTTTAAC+AGG + chr2_1:72842143-72842162 None:intergenic 40.0%
! GTTAAAGGCATGCATGTGTA+TGG - chr2_1:72842143-72842162 Msa0223300:CDS 40.0%
!! TGTATGGTTTTGCAGAGCAT+GGG - chr2_1:72842159-72842178 Msa0223300:CDS 40.0%
GGAAGTTCAAAGGATGTCAA+AGG - chr2_1:72842191-72842210 Msa0223300:CDS 40.0%
TTCGCCTATAGACTTCTGTA+GGG + chr2_1:72842220-72842239 None:intergenic 40.0%
ATTCGCCTATAGACTTCTGT+AGG + chr2_1:72842221-72842240 None:intergenic 40.0%
TACAGAAGTCTATAGGCGAA+TGG - chr2_1:72842220-72842239 Msa0223300:CDS 40.0%
ACAGAAGTCTATAGGCGAAT+GGG - chr2_1:72842221-72842240 Msa0223300:CDS 40.0%
ATGGGTCAAGGTTCATCTTA+TGG - chr2_1:72842239-72842258 Msa0223300:CDS 40.0%
CAAGGTTCATCTTATGGTGT+TGG - chr2_1:72842245-72842264 Msa0223300:CDS 40.0%
TATGCCGTTGATCATAACTC+AGG - chr2_1:72842296-72842315 Msa0223300:CDS 40.0%
GTTGATCATAACTCAGGAAC+TGG - chr2_1:72842302-72842321 Msa0223300:CDS 40.0%
CTCGTTCCATCCAACAACTT+CGG - chr2_1:72837914-72837933 Msa0223300:three_prime_UTR 45.0%
TTGATGCATTGAGGGAGAGA+GGG + chr2_1:72837980-72837999 None:intergenic 45.0%
! GAGAGCAGTTGATGCATTGA+GGG + chr2_1:72837988-72838007 None:intergenic 45.0%
! TGAGAGCAGTTGATGCATTG+AGG + chr2_1:72837989-72838008 None:intergenic 45.0%
TTTGTTAGAGTGGACGGCAA+TGG + chr2_1:72838077-72838096 None:intergenic 45.0%
!! AACGGGTTTGTTAGAGTGGA+CGG + chr2_1:72838083-72838102 None:intergenic 45.0%
!! GGAAAACGGGTTTGTTAGAG+TGG + chr2_1:72838087-72838106 None:intergenic 45.0%
ACAAATGCCGATGGAACTGT+TGG - chr2_1:72838523-72838542 Msa0223300:CDS 45.0%
CGTGATTCCAACAGTTCCAT+CGG + chr2_1:72838533-72838552 None:intergenic 45.0%
CGATGGAACTGTTGGAATCA+CGG - chr2_1:72838531-72838550 Msa0223300:CDS 45.0%
! AACTCAATCGGCTTTGTCTG+CGG + chr2_1:72838622-72838641 None:intergenic 45.0%
CTGATATGACTGAGAAGGAG+AGG - chr2_1:72838647-72838666 Msa0223300:CDS 45.0%
GTATAAGAGGAGGATGGAGA+AGG - chr2_1:72838699-72838718 Msa0223300:intron 45.0%
GGAAGCTCTCTATGTATCAC+AGG + chr2_1:72838997-72839016 None:intergenic 45.0%
ACATAGAGAGCTTCCCAAAG+AGG - chr2_1:72839002-72839021 Msa0223300:intron 45.0%
ATTGGATTAACAGCTGCGTC+CGG - chr2_1:72839308-72839327 Msa0223300:intron 45.0%
!! TTTGAGCATCGGAATCTGCA+AGG - chr2_1:72839676-72839695 Msa0223300:intron 45.0%
GGACTGAATAGAGCTCTTAG+TGG - chr2_1:72839697-72839716 Msa0223300:intron 45.0%
ACATGAAGAGTTCGGTTTCG+TGG + chr2_1:72839923-72839942 None:intergenic 45.0%
AAGCTGAGTCCAGTATTCAC+TGG - chr2_1:72839962-72839981 Msa0223300:intron 45.0%
AGCTGAGTCCAGTATTCACT+GGG - chr2_1:72839963-72839982 Msa0223300:intron 45.0%
! TGGATGAAGTGCCACCAATA+TGG - chr2_1:72839996-72840015 Msa0223300:intron 45.0%
! GGATGAAGTGCCACCAATAT+GGG - chr2_1:72839997-72840016 Msa0223300:intron 45.0%
GAGATAACAACTCGTGACGA+AGG - chr2_1:72840192-72840211 Msa0223300:CDS 45.0%
!! TGGTACTGGCATTGATCACA+TGG - chr2_1:72840293-72840312 Msa0223300:CDS 45.0%
TGGAGCGAGAAATATGTTCC+AGG - chr2_1:72840374-72840393 Msa0223300:intron 45.0%
ATAGGAGTAGTAGAGGGAAC+AGG - chr2_1:72840926-72840945 Msa0223300:CDS 45.0%
GTAGTAGAGGGAACAGGTTA+AGG - chr2_1:72840932-72840951 Msa0223300:CDS 45.0%
! GAAGCATTTAGCAGCCGTAA+TGG + chr2_1:72841070-72841089 None:intergenic 45.0%
TTACGGCTGCTAAATGCTTC+AGG - chr2_1:72841070-72841089 Msa0223300:CDS 45.0%
TACGGCTGCTAAATGCTTCA+GGG - chr2_1:72841071-72841090 Msa0223300:CDS 45.0%
TCCAACTTGCACTACCTTTG+AGG - chr2_1:72841343-72841362 Msa0223300:intron 45.0%
TCCTCAAAGGTAGTGCAAGT+TGG + chr2_1:72841347-72841366 None:intergenic 45.0%
TGCAAACTGCAGGTAGATCA+AGG - chr2_1:72841757-72841776 Msa0223300:CDS 45.0%
GCGATTGAAGAATGGGAACT+GGG + chr2_1:72841797-72841816 None:intergenic 45.0%
!! GTTGGTGGCGATTGAAGAAT+GGG + chr2_1:72841804-72841823 None:intergenic 45.0%
!! AGTTGGTGGCGATTGAAGAA+TGG + chr2_1:72841805-72841824 None:intergenic 45.0%
! TATCCAGTTGATGTCTGTGG+AGG - chr2_1:72841840-72841859 Msa0223300:CDS 45.0%
! TTGGTGGCCCTTATTCTGTA+AGG - chr2_1:72841956-72841975 Msa0223300:CDS 45.0%
TGGTGGCCCTTATTCTGTAA+GGG - chr2_1:72841957-72841976 Msa0223300:CDS 45.0%
GGTTACAACATGGGTGAACT+TGG - chr2_1:72841979-72841998 Msa0223300:CDS 45.0%
!! GTGTATGGTTTTGCAGAGCA+TGG - chr2_1:72842158-72842177 Msa0223300:CDS 45.0%
GGAACCCTACAGAAGTCTAT+AGG - chr2_1:72842213-72842232 Msa0223300:CDS 45.0%
TGGATTCTGCAATGATCCCT+TGG + chr2_1:72842547-72842566 None:intergenic 45.0%
! TATGGTGTCAGTTGTTCCTG+TGG + chr2_1:72842567-72842586 None:intergenic 45.0%
GGATGGAACGAGAGAAGACA+TGG + chr2_1:72837906-72837925 None:intergenic 50.0%
GTTCCATCCAACAACTTCGG+CGG - chr2_1:72837917-72837936 Msa0223300:three_prime_UTR 50.0%
!!! GTTGTTGTTTTTGCGACGGC+CGG + chr2_1:72837954-72837973 None:intergenic 50.0%
GTTGATGCATTGAGGGAGAG+AGG + chr2_1:72837981-72838000 None:intergenic 50.0%
GTGTTGCCGTAGAGGAAAAC+GGG + chr2_1:72838100-72838119 None:intergenic 50.0%
! GGTGTTGCCGTAGAGGAAAA+CGG + chr2_1:72838101-72838120 None:intergenic 50.0%
! TGGTGGTTTGGAGGAGGAAA+CGG - chr2_1:72838178-72838197 Msa0223300:CDS 50.0%
!! GAGGAGGAGGATTTTGGTCT+AGG - chr2_1:72838203-72838222 Msa0223300:CDS 50.0%
TCATCAGCAATAGCTGCTGC+CGG + chr2_1:72838238-72838257 None:intergenic 50.0%
GGCGCAACTACAGAAGGAAT+TGG - chr2_1:72838450-72838469 Msa0223300:CDS 50.0%
GAAGGGAAGACAAATGCCGA+TGG - chr2_1:72838514-72838533 Msa0223300:CDS 50.0%
GCAGACAAAGCCGATTGAGT+TGG - chr2_1:72838621-72838640 Msa0223300:CDS 50.0%
! GTCAGGAGAGGGAGTATAAG+AGG - chr2_1:72838686-72838705 Msa0223300:intron 50.0%
! AGGAGAGGGAGTATAAGAGG+AGG - chr2_1:72838689-72838708 Msa0223300:intron 50.0%
! GAGGGAGTATAAGAGGAGGA+TGG - chr2_1:72838693-72838712 Msa0223300:intron 50.0%
AGGGTATGCTTGTGCTTCAG+TGG - chr2_1:72838849-72838868 Msa0223300:intron 50.0%
TTGGATTAACAGCTGCGTCC+GGG - chr2_1:72839309-72839328 Msa0223300:intron 50.0%
! TCACTAGTCTCATCAGGCCT+TGG + chr2_1:72839417-72839436 None:intergenic 50.0%
AAGGCCTGATGAGACTAGTG+AGG - chr2_1:72839416-72839435 Msa0223300:intron 50.0%
AGGCCTGATGAGACTAGTGA+GGG - chr2_1:72839417-72839436 Msa0223300:intron 50.0%
! CGGCTGATGTCAGTACTGAA+TGG - chr2_1:72839484-72839503 Msa0223300:intron 50.0%
! TGGAGTATTATCCCTGGACG+TGG - chr2_1:72839504-72839523 Msa0223300:intron 50.0%
AGTATTATCCCTGGACGTGG+AGG - chr2_1:72839507-72839526 Msa0223300:intron 50.0%
GTATTATCCCTGGACGTGGA+GGG - chr2_1:72839508-72839527 Msa0223300:intron 50.0%
! AGTTCCACCAGGTTGAAGTG+AGG + chr2_1:72839650-72839669 None:intergenic 50.0%
CTGAGGGTTGAAGAAGTTGC+TGG + chr2_1:72839734-72839753 None:intergenic 50.0%
CAGCAACTTCTTCAACCCTC+AGG - chr2_1:72839732-72839751 Msa0223300:intron 50.0%
!! ACTGGCTCAAGAGTACCTGA+GGG + chr2_1:72839750-72839769 None:intergenic 50.0%
GCTGAGTCCAGTATTCACTG+GGG - chr2_1:72839964-72839983 Msa0223300:intron 50.0%
CTGAGTCCAGTATTCACTGG+GGG - chr2_1:72839965-72839984 Msa0223300:intron 50.0%
!! CCACCAATATGGGTTGATCG+CGG - chr2_1:72840007-72840026 Msa0223300:intron 50.0%
CTGTGGCGTGAAATTCTGCT+TGG + chr2_1:72840142-72840161 None:intergenic 50.0%
!! GGTCAAAGAGTACTACCTGG+TGG - chr2_1:72840234-72840253 Msa0223300:CDS 50.0%
!! CAAAGAGTACTACCTGGTGG+TGG - chr2_1:72840237-72840256 Msa0223300:CDS 50.0%
TCTGCACTAATTCCACCACC+AGG + chr2_1:72840252-72840271 None:intergenic 50.0%
!! GGTGGTGGAATTAGTGCAGA+TGG - chr2_1:72840252-72840271 Msa0223300:CDS 50.0%
! TGACGGATGAGATAGTCACC+TGG + chr2_1:72840395-72840414 None:intergenic 50.0%
CGCAGCTATTCGCACCATTA+CGG - chr2_1:72841053-72841072 Msa0223300:CDS 50.0%
ACGGCTGCTAAATGCTTCAG+GGG - chr2_1:72841072-72841091 Msa0223300:CDS 50.0%
GTAGATCAAGGCCTAGGCAT+TGG - chr2_1:72841769-72841788 Msa0223300:CDS 50.0%
GGCGATTGAAGAATGGGAAC+TGG + chr2_1:72841798-72841817 None:intergenic 50.0%
GCCACCAACTAACTCTGACA+CGG - chr2_1:72841815-72841834 Msa0223300:CDS 50.0%
ACCGTGTCAGAGTTAGTTGG+TGG + chr2_1:72841819-72841838 None:intergenic 50.0%
CTTCCTCCACAGACATCAAC+TGG + chr2_1:72841846-72841865 None:intergenic 50.0%
! CAGTTGATGTCTGTGGAGGA+AGG - chr2_1:72841844-72841863 Msa0223300:CDS 50.0%
GGTGGCCCTTATTCTGTAAG+GGG - chr2_1:72841958-72841977 Msa0223300:CDS 50.0%
TCCTACCTCCAGCATGTTTC+TGG + chr2_1:72842010-72842029 None:intergenic 50.0%
CACAGCTTGCAGCTGAGTTA+CGG - chr2_1:72842114-72842133 Msa0223300:CDS 50.0%
GCAGAGCATGGGAATGATCT+AGG - chr2_1:72842170-72842189 Msa0223300:CDS 50.0%
GTCTATAGGCGAATGGGTCA+AGG - chr2_1:72842227-72842246 Msa0223300:CDS 50.0%
!! TATGGTGTTGGTGCCAAGCT+TGG - chr2_1:72842257-72842276 Msa0223300:CDS 50.0%
!! TGTTGGTGCCAAGCTTGGTT+TGG - chr2_1:72842262-72842281 Msa0223300:CDS 50.0%
TGCTCTGACCAAACCAAGCT+TGG + chr2_1:72842273-72842292 None:intergenic 50.0%
GGGATCATTGCAGAATCCAC+AGG - chr2_1:72842548-72842567 Msa0223300:exon 50.0%
TGAGGGGTTTGAAGACACGG+CGG + chr2_1:72838024-72838043 None:intergenic 55.0%
CGGTGAGGGGTTTGAAGACA+CGG + chr2_1:72838027-72838046 None:intergenic 55.0%
TTCCTCTACGGCAACACCAC+TGG - chr2_1:72838103-72838122 Msa0223300:CDS 55.0%
!! AACACCACTGGTGGTGGACA+TGG - chr2_1:72838115-72838134 Msa0223300:CDS 55.0%
!! GGTGGTGGTGGTGGAAGTAA+TGG - chr2_1:72838136-72838155 Msa0223300:CDS 55.0%
!! GGTGGTGGTGGAAGTAATGG+TGG - chr2_1:72838139-72838158 Msa0223300:CDS 55.0%
GGTGGAAGTAATGGTGGCAG+TGG - chr2_1:72838145-72838164 Msa0223300:CDS 55.0%
GGAAGTAATGGTGGCAGTGG+TGG - chr2_1:72838148-72838167 Msa0223300:CDS 55.0%
AGTAATGGTGGCAGTGGTGG+TGG - chr2_1:72838151-72838170 Msa0223300:CDS 55.0%
! TGGTTTGGAGGAGGAAACGG+AGG - chr2_1:72838181-72838200 Msa0223300:CDS 55.0%
TTTGGAGGAGGAAACGGAGG+AGG - chr2_1:72838184-72838203 Msa0223300:CDS 55.0%
! ACGGAGGAGGAGGAGGATTT+TGG - chr2_1:72838197-72838216 Msa0223300:CDS 55.0%
TTCCGGGCGGAGTTTACACA+AGG - chr2_1:72838428-72838447 Msa0223300:intron 55.0%
TCCGGGCGGAGTTTACACAA+GGG - chr2_1:72838429-72838448 Msa0223300:intron 55.0%
! CACAAGGGCGCAACTACAGA+AGG - chr2_1:72838444-72838463 Msa0223300:CDS 55.0%
AGAGGAGGATGGAGAAGGCT+AGG - chr2_1:72838704-72838723 Msa0223300:intron 55.0%
! CCTCCCTCACTAGTCTCATC+AGG + chr2_1:72839423-72839442 None:intergenic 55.0%
CCTGATGAGACTAGTGAGGG+AGG - chr2_1:72839420-72839439 Msa0223300:intron 55.0%
TTGGATACCCTCCACGTCCA+GGG + chr2_1:72839518-72839537 None:intergenic 55.0%
!! ACGTGGAGGGTATCCAACTC+TGG - chr2_1:72839521-72839540 Msa0223300:intron 55.0%
GTTCAGGCCTCACTTCAACC+TGG - chr2_1:72839640-72839659 Msa0223300:intron 55.0%
!! GACTGGCTCAAGAGTACCTG+AGG + chr2_1:72839751-72839770 None:intergenic 55.0%
CCGCGATCAACCCATATTGG+TGG + chr2_1:72840010-72840029 None:intergenic 55.0%
CCACCGCGATCAACCCATAT+TGG + chr2_1:72840013-72840032 None:intergenic 55.0%
!! CCAATATGGGTTGATCGCGG+TGG - chr2_1:72840010-72840029 Msa0223300:intron 55.0%
GATCAATGCCAGTACCACCG+AGG + chr2_1:72840290-72840309 None:intergenic 55.0%
CGGCTGCTAAATGCTTCAGG+GGG - chr2_1:72841073-72841092 Msa0223300:CDS 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG + chr2_1:72841405-72841424 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG - chr2_1:72841406-72841425 Msa0223300:intron 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG + chr2_1:72841413-72841432 None:intergenic 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG + chr2_1:72841414-72841433 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+AGG - chr2_1:72841763-72841782 Msa0223300:CDS 55.0%
ATGTCTGTGGAGGAAGGAGC+TGG - chr2_1:72841850-72841869 Msa0223300:CDS 55.0%
ATGGAGGACAAGAACTGGCG+GGG + chr2_1:72841884-72841903 None:intergenic 55.0%
CATGGAGGACAAGAACTGGC+GGG + chr2_1:72841885-72841904 None:intergenic 55.0%
CCATGGAGGACAAGAACTGG+CGG + chr2_1:72841886-72841905 None:intergenic 55.0%
CGCCTACACAACCACCATAG+CGG + chr2_1:72841909-72841928 None:intergenic 55.0%
!! TGGTGCTGCCAGAAACATGC+TGG - chr2_1:72841999-72842018 Msa0223300:CDS 55.0%
TGCTGCCAGAAACATGCTGG+AGG - chr2_1:72842002-72842021 Msa0223300:CDS 55.0%
GCCAGAAACATGCTGGAGGT+AGG - chr2_1:72842006-72842025 Msa0223300:CDS 55.0%
CGTAACTCAGCTGCAAGCTG+TGG + chr2_1:72842116-72842135 None:intergenic 55.0%
GTGCCGCCGAAGTTGTTGGA+TGG + chr2_1:72837923-72837942 None:intergenic 60.0%
!! GATGGTGCCGCCGAAGTTGT+TGG + chr2_1:72837927-72837946 None:intergenic 60.0%
TTCGGCGGCACCATCTTGTC+CGG - chr2_1:72837932-72837951 Msa0223300:three_prime_UTR 60.0%
TTTGCGACGGCCGGACAAGA+TGG + chr2_1:72837945-72837964 None:intergenic 60.0%
TTTGAAGACACGGCGGCGAC+GGG + chr2_1:72838017-72838036 None:intergenic 60.0%
GTTTGAAGACACGGCGGCGA+CGG + chr2_1:72838018-72838037 None:intergenic 60.0%
AATGGCAGCGGCGGAGGAAA+CGG + chr2_1:72838059-72838078 None:intergenic 60.0%
AGAGTGGACGGCAATGGCAG+CGG + chr2_1:72838071-72838090 None:intergenic 60.0%
!! CACCAGTGGTGTTGCCGTAG+AGG + chr2_1:72838108-72838127 None:intergenic 60.0%
CTCTACGGCAACACCACTGG+TGG - chr2_1:72838106-72838125 Msa0223300:CDS 60.0%
TACGGCAACACCACTGGTGG+TGG - chr2_1:72838109-72838128 Msa0223300:CDS 60.0%
!! ACCACTGGTGGTGGACATGG+TGG - chr2_1:72838118-72838137 Msa0223300:CDS 60.0%
ACCACCATGTCCACCACCAG+TGG + chr2_1:72838122-72838141 None:intergenic 60.0%
!! ACTGGTGGTGGACATGGTGG+TGG - chr2_1:72838121-72838140 Msa0223300:CDS 60.0%
!! AATGGTGGCAGTGGTGGTGG+AGG - chr2_1:72838154-72838173 Msa0223300:CDS 60.0%
!! GGTGGTGGAGGTTGGTGGTT+TGG - chr2_1:72838166-72838185 Msa0223300:CDS 60.0%
!! GGTGGAGGTTGGTGGTTTGG+AGG - chr2_1:72838169-72838188 Msa0223300:CDS 60.0%
!! GGAGGTTGGTGGTTTGGAGG+AGG - chr2_1:72838172-72838191 Msa0223300:CDS 60.0%
GCCCTTGTGTAAACTCCGCC+CGG + chr2_1:72838433-72838452 None:intergenic 60.0%
GTTGGATACCCTCCACGTCC+AGG + chr2_1:72839519-72839538 None:intergenic 60.0%
CAGGCCTCACTTCAACCTGG+TGG - chr2_1:72839643-72839662 Msa0223300:intron 60.0%
TGGTGGCACTTCATCCAGCC+CGG + chr2_1:72839993-72840012 None:intergenic 60.0%
GATGGACCTCCTACCAGCCT+CGG - chr2_1:72840270-72840289 Msa0223300:CDS 60.0%
AATGCCAGTACCACCGAGGC+TGG + chr2_1:72840286-72840305 None:intergenic 60.0%
! GCGGCGTGTAGAGTGTTCAG+TGG - chr2_1:72840986-72841005 Msa0223300:CDS 60.0%
! TGTTTTCCAGGGCCGGCCTA+AGG - chr2_1:72841378-72841397 Msa0223300:intron 60.0%
! GTTTTCCAGGGCCGGCCTAA+GGG - chr2_1:72841379-72841398 Msa0223300:intron 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG + chr2_1:72841397-72841416 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG - chr2_1:72841398-72841417 Msa0223300:intron 60.0%
GGGCCAAGCAACCCAAGCAA+GGG - chr2_1:72841399-72841418 Msa0223300:intron 60.0%
!! GGCCTCTTAGTCTCTAGGGC+CGG - chr2_1:72841654-72841673 Msa0223300:CDS 60.0%
GGAACTGGGTGCCAATGCCT+AGG + chr2_1:72841783-72841802 None:intergenic 60.0%
TGGAGGACAAGAACTGGCGG+GGG + chr2_1:72841883-72841902 None:intergenic 60.0%
CCGCCAGTTCTTGTCCTCCA+TGG - chr2_1:72841883-72841902 Msa0223300:CDS 60.0%
CGGCCATGGAGGACAAGAAC+TGG + chr2_1:72841889-72841908 None:intergenic 60.0%
CTTGTCCTCCATGGCCGCTA+TGG - chr2_1:72841892-72841911 Msa0223300:CDS 60.0%
AACCACCATAGCGGCCATGG+AGG + chr2_1:72841900-72841919 None:intergenic 60.0%
CACAACCACCATAGCGGCCA+TGG + chr2_1:72841903-72841922 None:intergenic 60.0%
GGCCGCTATGGTGGTTGTGT+AGG - chr2_1:72841904-72841923 Msa0223300:CDS 60.0%
!! GGTGGTGGACATGGTGGTGG+TGG - chr2_1:72838124-72838143 Msa0223300:CDS 65.0%
!! GGTGGACATGGTGGTGGTGG+TGG - chr2_1:72838127-72838146 Msa0223300:CDS 65.0%
!! GTGGCAGTGGTGGTGGAGGT+TGG - chr2_1:72838158-72838177 Msa0223300:CDS 65.0%
!! GCAGTGGTGGTGGAGGTTGG+TGG - chr2_1:72838161-72838180 Msa0223300:CDS 65.0%
GGAGGAGGAAACGGAGGAGG+AGG - chr2_1:72838187-72838206 Msa0223300:CDS 65.0%
GGAGGAAACGGAGGAGGAGG+AGG - chr2_1:72838190-72838209 Msa0223300:CDS 65.0%
CCAGTATTCACTGGGGGCCC+CGG - chr2_1:72839971-72839990 Msa0223300:intron 65.0%
CAGTATTCACTGGGGGCCCC+GGG - chr2_1:72839972-72839991 Msa0223300:intron 65.0%
GTGGCACTTCATCCAGCCCG+GGG + chr2_1:72839991-72840010 None:intergenic 65.0%
GGTGGCACTTCATCCAGCCC+GGG + chr2_1:72839992-72840011 None:intergenic 65.0%
GTACCACCGAGGCTGGTAGG+AGG + chr2_1:72840279-72840298 None:intergenic 65.0%
CCAGTACCACCGAGGCTGGT+AGG + chr2_1:72840282-72840301 None:intergenic 65.0%
CCTACCAGCCTCGGTGGTAC+TGG - chr2_1:72840279-72840298 Msa0223300:CDS 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG + chr2_1:72841393-72841412 None:intergenic 65.0%
GGCCGGCCCTAGAGACTAAG+AGG + chr2_1:72841659-72841678 None:intergenic 65.0%
AGGACAAGAACTGGCGGGGG+TGG + chr2_1:72841880-72841899 None:intergenic 65.0%
GTCCTCCATGGCCGCTATGG+TGG - chr2_1:72841895-72841914 Msa0223300:CDS 65.0%
AAGACACGGCGGCGACGGGA+AGG + chr2_1:72838013-72838032 None:intergenic 70.0%
! AACGGCGACGGTGGCGGTGA+GGG + chr2_1:72838041-72838060 None:intergenic 70.0%
! AAACGGCGACGGTGGCGGTG+AGG + chr2_1:72838042-72838061 None:intergenic 70.0%
GGAGGAAACGGCGACGGTGG+CGG + chr2_1:72838047-72838066 None:intergenic 70.0%
AGCGGCGGAGGAAACGGCGA+CGG + chr2_1:72838053-72838072 None:intergenic 70.0%
GTGGACGGCAATGGCAGCGG+CGG + chr2_1:72838068-72838087 None:intergenic 70.0%
CCGGGGCCCCCAGTGAATAC+TGG + chr2_1:72839974-72839993 None:intergenic 70.0%
GGACCTCCTACCAGCCTCGG+TGG - chr2_1:72840273-72840292 Msa0223300:CDS 70.0%
! ACGGCGACGGTGGCGGTGAG+GGG + chr2_1:72838040-72838059 None:intergenic 75.0%
GGCGGAGGAAACGGCGACGG+TGG + chr2_1:72838050-72838069 None:intergenic 75.0%
GACGGCAATGGCAGCGGCGG+AGG + chr2_1:72838065-72838084 None:intergenic 75.0%
ATTCACTGGGGGCCCCGGGC+TGG - chr2_1:72839976-72839995 Msa0223300:intron 75.0%
CTTGGCCCTTAGGCCGGCCC+TGG + chr2_1:72841387-72841406 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72837864 72842597 72837864 ID=Msa0223300;Name=Msa0223300
chr2_1 mRNA 72837864 72842597 72837864 ID=Msa0223300-mRNA-1;Parent=Msa0223300;Name=Msa0223300-mRNA-1;_AED=0.06;_eAED=0.06;_QI=41|0.83|0.71|1|1|1|7|239|756
chr2_1 exon 72837864 72838342 72837864 ID=Msa0223300-mRNA-1:exon:21174;Parent=Msa0223300-mRNA-1
chr2_1 exon 72838438 72838692 72838438 ID=Msa0223300-mRNA-1:exon:21173;Parent=Msa0223300-mRNA-1
chr2_1 exon 72840066 72840314 72840066 ID=Msa0223300-mRNA-1:exon:21172;Parent=Msa0223300-mRNA-1
chr2_1 exon 72840521 72840598 72840521 ID=Msa0223300-mRNA-1:exon:21171;Parent=Msa0223300-mRNA-1
chr2_1 exon 72840708 72840815 72840708 ID=Msa0223300-mRNA-1:exon:21170;Parent=Msa0223300-mRNA-1
chr2_1 exon 72840919 72841140 72840919 ID=Msa0223300-mRNA-1:exon:21169;Parent=Msa0223300-mRNA-1
chr2_1 exon 72841438 72842597 72841438 ID=Msa0223300-mRNA-1:exon:21168;Parent=Msa0223300-mRNA-1
chr2_1 five_prime_UTR 72842557 72842597 72842557 ID=Msa0223300-mRNA-1:five_prime_utr;Parent=Msa0223300-mRNA-1
chr2_1 CDS 72841438 72842556 72841438 ID=Msa0223300-mRNA-1:cds;Parent=Msa0223300-mRNA-1
chr2_1 CDS 72840919 72841140 72840919 ID=Msa0223300-mRNA-1:cds;Parent=Msa0223300-mRNA-1
chr2_1 CDS 72840708 72840815 72840708 ID=Msa0223300-mRNA-1:cds;Parent=Msa0223300-mRNA-1
chr2_1 CDS 72840521 72840598 72840521 ID=Msa0223300-mRNA-1:cds;Parent=Msa0223300-mRNA-1
chr2_1 CDS 72840066 72840314 72840066 ID=Msa0223300-mRNA-1:cds;Parent=Msa0223300-mRNA-1
chr2_1 CDS 72838438 72838692 72838438 ID=Msa0223300-mRNA-1:cds;Parent=Msa0223300-mRNA-1
chr2_1 CDS 72838103 72838342 72838103 ID=Msa0223300-mRNA-1:cds;Parent=Msa0223300-mRNA-1
chr2_1 three_prime_UTR 72837864 72838102 72837864 ID=Msa0223300-mRNA-1:three_prime_utr;Parent=Msa0223300-mRNA-1
Gene Sequence

>Msa0223300

ATGTCTTCTCTCGTTCCATCCAACAACTTCGGCGGCACCATCTTGTCCGGCCGTCGCAAAAACAACAACAAACCCTCTCTCCCTCAATGCATCAACTGCTCTCAACCTTCCCGTCGCCGCCGTGTCTTCAAACCCCTCACCGCCACCGTCGCCGTTTCCTCCGCCGCTGCCATTGCCGTCCACTCTAACAAACCCGTTTTCCTCTACGGCAACACCACTGGTGGTGGACATGGTGGTGGTGGTGGAAGTAATGGTGGCAGTGGTGGTGGAGGTTGGTGGTTTGGAGGAGGAAACGGAGGAGGAGGAGGATTTTGGTCTAGGTTTTTTACTCCGGCAGCAGCTATTGCTGATGAAACTAAATCTGAAGAATTTGATTCTCATGGTATGCCTGTCAATATAACTATTCAATTGAACAAACTCAGTGGTTTTAAGAAATACAAGATTTCTGAGATTACGTTTTTCGATAAGAAGCGAAAAACAAAAGTTGGTTCTGATGATTCTTTTAGTGAAATGATTTCTATTGTTCCGGGCGGAGTTTACACAAGGGCGCAACTACAGAAGGAATTGGATAGTTTGACATCTAGTGGAATGTTTGAAAAGGTTGATCTTGAAGGGAAGACAAATGCCGATGGAACTGTTGGAATCACGGTTTCATATAGTGAGAGTACTTGGGAGGCTGCTGAGAAGTTTCGTTGTATTAATGTTGGTATGATGCCGCAGACAAAGCCGATTGAGTTGGATTCTGATATGACTGAGAAGGAGAGGGTGAAACAGTATTTGAGTCAGGAGAGGGAGTATAAGAGGAGGATGGAGAAGGCTAGGCCGTGTATTTTGCCGAATACCGTTCATTTGGAGATTATGGGTATGATGAGGAAAGAAAGGAGTTTGAGTGCTAGGTTGTTGCAGAAGATTAGGGATAAGGTTCAGAAGTGGTATCATGATCAAGGGTATGCTTGTGCTTCAGTGGTTAATTTTGGAAATCTTAATACCAAAGAGGTTGTTTGTGAGGTTGTTGAAGGTGATATCAGTCAATTGCAAGTTCAGTTCATTGATAAGCTTGGCAATGTTGTTGAAGGCAATACTCAAGCCCCTGTGATACATAGAGAGCTTCCCAAAGAGCTGCGTCCGGGTAACACCTTTAATATTGAAGCAGGGAAGCAAGCTTTAAGAAACATAAATTCTCTTTCTTTGTTTTCGAATATTGAGGTTAATCCAAGGCCTGATGAGACTAGTGAGGGAGGCATAATTGTTGAAATTAAGGTAAAAGAGATGGATCAGAAGACGGCTGATGTCAGTACTGAATGGAGTATTATCCCTGGACGTGGAGGGTATCCAACTCTGGCCTCACTTCAACCTGGTGGAACTATTTCTTTTGAGCATCGGAATCTGCAAGGACTGAATAGAGCTCTTAGTGGTTCCATAACAACCAGCAACTTCTTCAACCCTCAGGATGATCTTGCATTTAAGATGGAGTATGCACATCCATATTTGGATGGTGTAGATAATCCACGAAACCGAACTCTTCATAATTTCACGCCACAGAGTAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACTCGTGACGAAGGTAATCAAATTTGTGCAAATGGTCAAAGAGTACTACCTGGTGGTGGAATTAGTGCAGATGGACCTCCTACCAGCCTCGGTGGTACTGGCATTGATCACATGGCATTTTTACAAGCGAATATCATTCGTGATAACACACGTTTTGTGAATGGAGCTGTAGTTGGAGCGAGAAATATGTTCCAGGTAGATCAAGGCCTAGGCATTGGCACCCAGTTCCCATTCTTCAATCGCCACCAACTAACTCTGACACGGTTTATCCAGTTGATGTCTGTGGAGGAAGGAGCTGGTAAACCACCCCCGCCAGTTCTTGTCCTCCATGGCCGCTATGGTGGTTGTGTAGGCGATCTTCCAAGTTATGATGCTTTTACTCTTGGTGGCCCTTATTCTGTAAGGGGTTACAACATGGGTGAACTTGGTGCTGCCAGAAACATGCTGGAGCTTGCAGCTGAGTTACGGATACCTGTTAAAGGCATGCATGTGTATGGTTTTGCAGAGCATGGGAATGATCTAGGAAGTTCAAAGGATGTCAAAGGGAACCCTACAGAAGTCTATAGGCGAATGGGTCAAGGTTCATCTTATGGTGTTGGTGCCAAGCTTGGTTTGGTCAGAGCAGAATATGCCGTTGATCATAACTCAGGAACTGGTGCATTATATTTACGTTTTGGAGAGAGGTTTTAA

Protein sequence

>Msa0223300

MSSLVPSNNFGGTILSGRRKNNNKPSLPQCINCSQPSRRRRVFKPLTATVAVSSAAAIAVHSNKPVFLYGNTTGGGHGGGGGSNGGSGGGGWWFGGGNGGGGGFWSRFFTPAAAIADETKSEEFDSHGMPVNITIQLNKLSGFKKYKISEITFFDKKRKTKVGSDDSFSEMISIVPGGVYTRAQLQKELDSLTSSGMFEKVDLEGKTNADGTVGITVSYSESTWEAAEKFRCINVGMMPQTKPIELDSDMTEKERVKQYLSQEREYKRRMEKARPCILPNTVHLEIMGMMRKERSLSARLLQKIRDKVQKWYHDQGYACASVVNFGNLNTKEVVCEVVEGDISQLQVQFIDKLGNVVEGNTQAPVIHRELPKELRPGNTFNIEAGKQALRNINSLSLFSNIEVNPRPDETSEGGIIVEIKVKEMDQKTADVSTEWSIIPGRGGYPTLASLQPGGTISFEHRNLQGLNRALSGSITTSNFFNPQDDLAFKMEYAHPYLDGVDNPRNRTLHNFTPQSKFTYGLVMEEITTRDEGNQICANGQRVLPGGGISADGPPTSLGGTGIDHMAFLQANIIRDNTRFVNGAVVGARNMFQVDQGLGIGTQFPFFNRHQLTLTRFIQLMSVEEGAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRIPVKGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVGAKLGLVRAEYAVDHNSGTGALYLRFGERF*