Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820460 | XP_003617067.1 | 86.809 | 561 | 5 | 2 | 1 | 492 | 1 | 561 | 0.0 | 956 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820460 | sp|Q9SF16|TCPH_ARATH | 80.074 | 537 | 38 | 2 | 1 | 468 | 1 | 537 | 0.0 | 828 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820460 | G7K2W1 | 86.809 | 561 | 5 | 2 | 1 | 492 | 1 | 561 | 0.0 | 956 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0740170 | Msa0820460 | 0.880315 | 6.073570e-70 | -8.615850e-47 |
| Msa0820460 | Msa1174720 | 0.813033 | 3.141304e-51 | -8.615850e-47 |
| Msa0223090 | Msa0820460 | 0.808646 | 2.796464e-50 | -8.615850e-47 |
| Msa0223300 | Msa0820460 | 0.833012 | 6.809010e-56 | -8.615850e-47 |
| Msa0302640 | Msa0820460 | 0.804269 | 2.342341e-49 | -8.615850e-47 |
| Msa0532050 | Msa0820460 | 0.818607 | 1.794880e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820460 | MtrunA17_Chr5g0440381 | 86.809 | 561 | 5 | 2 | 1 | 492 | 1 | 561 | 0.0 | 956 |
| Msa0820460 | MtrunA17_Chr8g0380331 | 33.144 | 528 | 264 | 11 | 21 | 463 | 17 | 540 | 3.41e-76 | 249 |
| Msa0820460 | MtrunA17_Chr7g0241881 | 33.015 | 524 | 261 | 12 | 11 | 457 | 6 | 516 | 3.32e-73 | 240 |
| Msa0820460 | MtrunA17_Chr7g0272821 | 32.177 | 519 | 272 | 10 | 11 | 457 | 6 | 516 | 2.33e-72 | 238 |
| Msa0820460 | MtrunA17_Chr2g0282161 | 29.575 | 541 | 295 | 9 | 5 | 467 | 1 | 533 | 7.88e-71 | 235 |
| Msa0820460 | MtrunA17_Chr3g0123341 | 27.410 | 529 | 299 | 10 | 6 | 457 | 10 | 530 | 1.03e-51 | 183 |
| Msa0820460 | MtrunA17_Chr1g0160221 | 25.869 | 518 | 308 | 12 | 11 | 457 | 11 | 523 | 4.79e-45 | 165 |
| Msa0820460 | MtrunA17_Chr6g0461541 | 25.676 | 518 | 309 | 11 | 11 | 457 | 8 | 520 | 3.19e-43 | 160 |
| Msa0820460 | MtrunA17_Chr3g0139481 | 28.387 | 465 | 279 | 12 | 27 | 457 | 28 | 472 | 2.92e-42 | 156 |
| Msa0820460 | MtrunA17_Chr7g0214841 | 23.314 | 519 | 302 | 10 | 25 | 458 | 19 | 526 | 5.93e-31 | 125 |
| Msa0820460 | MtrunA17_Chr8g0392171 | 27.957 | 279 | 156 | 11 | 181 | 425 | 10 | 277 | 2.00e-20 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820460 | AT3G11830.1 | 80.074 | 537 | 38 | 2 | 1 | 468 | 1 | 537 | 0.0 | 828 |
| Msa0820460 | AT3G11830.2 | 79.702 | 537 | 38 | 3 | 1 | 468 | 1 | 535 | 0.0 | 819 |
| Msa0820460 | AT3G20050.1 | 32.163 | 541 | 269 | 12 | 17 | 468 | 13 | 544 | 1.34e-76 | 250 |
| Msa0820460 | AT5G20890.1 | 31.731 | 520 | 273 | 11 | 11 | 457 | 6 | 516 | 7.84e-71 | 234 |
| Msa0820460 | AT5G26360.1 | 29.575 | 541 | 295 | 10 | 5 | 467 | 1 | 533 | 2.72e-65 | 221 |
| Msa0820460 | AT1G24510.1 | 26.365 | 531 | 306 | 10 | 6 | 459 | 10 | 532 | 8.41e-50 | 179 |
| Msa0820460 | AT3G03960.1 | 25.806 | 527 | 311 | 13 | 5 | 457 | 6 | 526 | 2.73e-45 | 167 |
| Msa0820460 | AT1G24510.3 | 24.790 | 476 | 274 | 9 | 60 | 459 | 12 | 479 | 1.16e-37 | 144 |
| Msa0820460 | AT1G24510.2 | 25.000 | 428 | 256 | 8 | 89 | 459 | 37 | 456 | 1.37e-32 | 129 |
| Msa0820460 | AT3G02530.1 | 22.266 | 512 | 308 | 8 | 29 | 458 | 23 | 526 | 3.93e-31 | 126 |
| Msa0820460 | AT5G16070.1 | 22.505 | 511 | 307 | 9 | 29 | 458 | 23 | 525 | 8.22e-29 | 120 |
| Msa0820460 | AT3G18190.1 | 35.676 | 185 | 115 | 3 | 274 | 457 | 352 | 533 | 5.45e-27 | 114 |
| Msa0820460 | AT3G18190.1 | 34.466 | 206 | 107 | 4 | 27 | 208 | 32 | 233 | 7.92e-27 | 114 |
Find 142 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGAAGAGAGAGAGTTATT+AGG | 0.187281 | 5_3:-57827900 | None:intergenic |
| ACACTTTCTTCAAAACTTAT+AGG | 0.194659 | 5_3:+57829597 | Msa0820460:CDS |
| ATTCATTTGCCAACTTTGTC+TGG | 0.204932 | 5_3:+57834760 | Msa0820460:CDS |
| CTTATTTGCTTGAAGGTTCT+TGG | 0.219293 | 5_3:+57832330 | Msa0820460:intron |
| AGGAAGAGAGAGAGTTATTA+GGG | 0.227511 | 5_3:-57827899 | None:intergenic |
| TAGCCTTATGTAGTAATCTA+TGG | 0.238863 | 5_3:+57836646 | Msa0820460:three_prime_UTR |
| AAAATTTAATACGGAGTTAT+AGG | 0.246244 | 5_3:+57829364 | Msa0820460:CDS |
| GGTTCTCTTCTACAGGTTCC+TGG | 0.281574 | 5_3:+57831558 | Msa0820460:intron |
| AAAGGAATTCTTTGCATCTA+TGG | 0.289996 | 5_3:+57829626 | Msa0820460:CDS |
| TGCCACTGGATGTATGTTTC+TGG | 0.292353 | 5_3:+57836361 | Msa0820460:three_prime_UTR |
| GAAATATTGGCACCTTATTT+CGG | 0.304281 | 5_3:-57831733 | None:intergenic |
| AAAAGAGTTGCTGCTGCAAC+TGG | 0.305439 | 5_3:+57832181 | Msa0820460:CDS |
| CAGAAACACGCGCTTCCTTC+TGG | 0.317305 | 5_3:+57833720 | Msa0820460:CDS |
| TTTATCTACAGATGTTGATA+TGG | 0.326864 | 5_3:+57836408 | Msa0820460:three_prime_UTR |
| GAAGGTGAGGGTGCTCCATT+TGG | 0.331197 | 5_3:+57834708 | Msa0820460:intron |
| GAGGGGTTGAATTTATTAGA+TGG | 0.333080 | 5_3:+57836541 | Msa0820460:three_prime_UTR |
| TGATTAGAAATGTGTTCTAA+TGG | 0.334547 | 5_3:+57836295 | Msa0820460:exon |
| AGAAAGAAAATGCCGAAATA+AGG | 0.352104 | 5_3:+57831721 | Msa0820460:CDS |
| AAGGTGAGGGTGCTCCATTT+GGG | 0.365916 | 5_3:+57834709 | Msa0820460:intron |
| TGCTACAGAGGCAGCTTGCC+TGG | 0.375773 | 5_3:+57834902 | Msa0820460:CDS |
| ATGCAATCATGATTGTTAGA+AGG | 0.376275 | 5_3:+57832601 | Msa0820460:CDS |
| GAGCTAGCTGTTAGCATTGA+GGG | 0.383111 | 5_3:+57829525 | Msa0820460:CDS |
| CTGATCAAACTAGGATTTGA+TGG | 0.387094 | 5_3:+57836468 | Msa0820460:three_prime_UTR |
| CGCGACTCATTTCTTGTCAA+TGG | 0.388192 | 5_3:+57831591 | Msa0820460:CDS |
| CAGCATTGTCACATAATTGC+CGG | 0.405508 | 5_3:-57833662 | None:intergenic |
| TTGTGCGTGCATGCTGCCTT+AGG | 0.406875 | 5_3:-57832780 | None:intergenic |
| CAGCATGCACGCACAATAGC+TGG | 0.407586 | 5_3:+57832787 | Msa0820460:CDS |
| GATTAGAAATGTGTTCTAAT+GGG | 0.411022 | 5_3:+57836296 | Msa0820460:exon |
| AAACTCATCCACGATGATAA+AGG | 0.411477 | 5_3:+57828180 | Msa0820460:CDS |
| TTCACTCTCAAAATTTAATA+CGG | 0.412053 | 5_3:+57829355 | Msa0820460:CDS |
| TTGCAATTGGGACTGATGAT+AGG | 0.412581 | 5_3:+57829664 | Msa0820460:CDS |
| TATCTAAATACTTAGTGTTA+AGG | 0.421493 | 5_3:-57836605 | None:intergenic |
| GTGGACGCTGTAATTGCAAT+TGG | 0.430540 | 5_3:+57829651 | Msa0820460:CDS |
| ATCTTCAATGGATGTCCATC+TGG | 0.432018 | 5_3:+57832402 | Msa0820460:CDS |
| ATATGAAAATGTCTTCTTGA+AGG | 0.433340 | 5_3:-57831619 | None:intergenic |
| TTCATTTGCCAACTTTGTCT+GGG | 0.434603 | 5_3:+57834761 | Msa0820460:CDS |
| GATGATAGGTTAAACATGAT+TGG | 0.435001 | 5_3:+57829678 | Msa0820460:CDS |
| TCTCCGTGGTGGAGCCGATC+AGG | 0.435496 | 5_3:+57832443 | Msa0820460:CDS |
| TTTATTAGATGGCTGTTGTT+GGG | 0.438626 | 5_3:+57836552 | Msa0820460:three_prime_UTR |
| GGAGAACTATGGTGGCTGTT+TGG | 0.439617 | 5_3:-57832425 | None:intergenic |
| AGCCTCTCCTTGTGCACTCT+CGG | 0.442120 | 5_3:-57836203 | None:intergenic |
| GGCTCCACCACGGAGAACTA+TGG | 0.450646 | 5_3:-57832436 | None:intergenic |
| ATGGTAATATTGAGGATTCT+AGG | 0.450981 | 5_3:+57836437 | Msa0820460:three_prime_UTR |
| AGTAGCGCCGTCGTTAGAAA+TGG | 0.455900 | 5_3:-57828211 | None:intergenic |
| GGAGGTAGAGGTCGCGGAGG+TGG | 0.456324 | 5_3:+57836241 | Msa0820460:CDS |
| ATTCTTTGCATCTATGGTTG+TGG | 0.462064 | 5_3:+57829632 | Msa0820460:CDS |
| TGTAATATGCGCAATGCCAC+TGG | 0.462560 | 5_3:+57836347 | Msa0820460:three_prime_UTR |
| GGTTTCCGTGGCCGTGGACG+AGG | 0.463717 | 5_3:+57836262 | Msa0820460:CDS |
| CACCCTAGGTCCTCGCGGTA+TGG | 0.466201 | 5_3:+57828155 | Msa0820460:CDS |
| TTTGGATCGAGAAACTTCTT+GGG | 0.472807 | 5_3:-57831660 | None:intergenic |
| ACTATTACTTAATGTTGAGT+TGG | 0.473212 | 5_3:+57831686 | Msa0820460:CDS |
| GAGAGATTCAACATCTTCAA+TGG | 0.474859 | 5_3:+57832390 | Msa0820460:CDS |
| TTCCCATAGATTACTACATA+AGG | 0.479151 | 5_3:-57836649 | None:intergenic |
| GCAAAGCCTTTCATTGAAGA+TGG | 0.481903 | 5_3:+57829330 | Msa0820460:CDS |
| AAAACTTATAGGCGGAGAAA+AGG | 0.483886 | 5_3:+57829608 | Msa0820460:CDS |
| ATTTATTAGATGGCTGTTGT+TGG | 0.484825 | 5_3:+57836551 | Msa0820460:three_prime_UTR |
| GTGGCTATGTCGACCCCAAA+TGG | 0.487755 | 5_3:-57834723 | None:intergenic |
| TTCAACCATGTCTTCTATGC+TGG | 0.488113 | 5_3:+57827936 | Msa0820460:exon |
| TGGAAATAAGCCGGTACCTA+AGG | 0.491090 | 5_3:+57832764 | Msa0820460:CDS |
| AGCATTGTCACATAATTGCC+GGG | 0.495335 | 5_3:-57833661 | None:intergenic |
| TGTGTTACCTTTACAACTGC+AGG | 0.496824 | 5_3:-57834786 | None:intergenic |
| AAGAATTCAACTGTAGTTGC+TGG | 0.502547 | 5_3:+57832630 | Msa0820460:CDS |
| CTGGGAGCCTGCAGTTGTAA+AGG | 0.504005 | 5_3:+57834779 | Msa0820460:CDS |
| TTATTAGATGGCTGTTGTTG+GGG | 0.507293 | 5_3:+57836553 | Msa0820460:three_prime_UTR |
| AGAGGCTGCTGCAAGTGCCA+TGG | 0.507829 | 5_3:+57836219 | Msa0820460:CDS |
| GTCCATACCGCGAGGACCTA+GGG | 0.509242 | 5_3:-57828157 | None:intergenic |
| GAGGCTGCTGCAAGTGCCAT+GGG | 0.510487 | 5_3:+57836220 | Msa0820460:CDS |
| TGTCCATACCGCGAGGACCT+AGG | 0.512184 | 5_3:-57828158 | None:intergenic |
| CTCCTATGCAAAAGCTCTTG+AGG | 0.514576 | 5_3:+57832831 | Msa0820460:CDS |
| GCAAGTGCCATGGGAGGTAG+AGG | 0.520860 | 5_3:+57836229 | Msa0820460:CDS |
| TGGACGCTGTAATTGCAATT+GGG | 0.522784 | 5_3:+57829652 | Msa0820460:CDS |
| GTGCATGCTGCCTTAGGTAC+CGG | 0.523446 | 5_3:-57832774 | None:intergenic |
| TGCAATCATGATTGTTAGAA+GGG | 0.525847 | 5_3:+57832602 | Msa0820460:CDS |
| ATGGTGGCTGTTTGGCCAGA+TGG | 0.526129 | 5_3:-57832417 | None:intergenic |
| CGGCAATTATGTGACAATGC+TGG | 0.526950 | 5_3:+57833663 | Msa0820460:CDS |
| AAACATGATTGGAATAAAGA+AGG | 0.527009 | 5_3:+57829689 | Msa0820460:CDS |
| TTATAGGAATGCATGCTCCT+TGG | 0.527012 | 5_3:+57829380 | Msa0820460:CDS |
| GATGTTGATATGGTATGAAA+TGG | 0.530542 | 5_3:+57836418 | Msa0820460:three_prime_UTR |
| TGCTATAAATGCTGCTACAG+AGG | 0.531026 | 5_3:+57834890 | Msa0820460:CDS |
| AAGAGTTGCTGCTGCAACTG+GGG | 0.532157 | 5_3:+57832183 | Msa0820460:CDS |
| GGAGGTGGTTTCCGTGGCCG+TGG | 0.540350 | 5_3:+57836256 | Msa0820460:CDS |
| TTGATGTTGCTTACGAGTTG+TGG | 0.541866 | 5_3:-57828099 | None:intergenic |
| TGTTATTGCAGGTTATTCCC+CGG | 0.542735 | 5_3:+57833643 | Msa0820460:intron |
| GCCATGGGAGGTAGAGGTCG+CGG | 0.543406 | 5_3:+57836235 | Msa0820460:CDS |
| AAAGAGTTGCTGCTGCAACT+GGG | 0.544621 | 5_3:+57832182 | Msa0820460:CDS |
| GTTGAAGACGGTGATGGAGG+AGG | 0.544625 | 5_3:-57827919 | None:intergenic |
| TCCGCGACCTCTACCTCCCA+TGG | 0.546971 | 5_3:-57836236 | None:intergenic |
| GAGCATCATCTGATCAAACT+AGG | 0.549384 | 5_3:+57836459 | Msa0820460:three_prime_UTR |
| GCATTCCTCGTCCACGGCCA+CGG | 0.551786 | 5_3:-57836267 | None:intergenic |
| GGTATGAAATGGTAATATTG+AGG | 0.552225 | 5_3:+57836429 | Msa0820460:three_prime_UTR |
| AGCCTTATGTAGTAATCTAT+GGG | 0.556362 | 5_3:+57836647 | Msa0820460:three_prime_UTR |
| AGAGCTAGCTGTTAGCATTG+AGG | 0.556400 | 5_3:+57829524 | Msa0820460:CDS |
| GATGTCGTTCGAACCACCCT+AGG | 0.565085 | 5_3:+57828141 | Msa0820460:CDS |
| TGCAGGCTCCCAGACAAAGT+TGG | 0.565410 | 5_3:-57834769 | None:intergenic |
| TGTCAATAACATTATTGATG+AGG | 0.570369 | 5_3:+57832222 | Msa0820460:CDS |
| ATTTATACAGGCGATTGAGA+AGG | 0.580846 | 5_3:+57829497 | Msa0820460:intron |
| GTTGTCAGATGGAAATAAGC+CGG | 0.584185 | 5_3:+57832755 | Msa0820460:intron |
| GAAGGTACAGACACGTCTCA+AGG | 0.586298 | 5_3:+57828072 | Msa0820460:CDS |
| CAGATCATACTACTGAAAGA+AGG | 0.586463 | 5_3:+57828054 | Msa0820460:CDS |
| TCAACTAAGATCTTCGCAGC+GGG | 0.587340 | 5_3:-57828261 | None:intergenic |
| TCAACTGTAGTTGCTGGTGG+AGG | 0.588207 | 5_3:+57832636 | Msa0820460:CDS |
| TCTTTCAGTAGTATGATCTG+TGG | 0.588647 | 5_3:-57828051 | None:intergenic |
| TGAACACCATCTTCAATGAA+AGG | 0.598288 | 5_3:-57829336 | None:intergenic |
| TTTGGGGTCGACATAGCCAC+TGG | 0.598540 | 5_3:+57834726 | Msa0820460:CDS |
| GGTTCGAACGACATCGGCAA+CGG | 0.599367 | 5_3:-57828133 | None:intergenic |
| ATCAACTAAGATCTTCGCAG+CGG | 0.605241 | 5_3:-57828262 | None:intergenic |
| ATGGTTGAAGACGGTGATGG+AGG | 0.605889 | 5_3:-57827922 | None:intergenic |
| TGCTAAGTCTCAGGACTCTG+AGG | 0.607796 | 5_3:+57828287 | Msa0820460:intron |
| AGGTGAGGGTGCTCCATTTG+GGG | 0.609656 | 5_3:+57834710 | Msa0820460:intron |
| GTCCGAGAGTGCACAAGGAG+AGG | 0.612084 | 5_3:+57836201 | Msa0820460:intron |
| AATTCAACTGTAGTTGCTGG+TGG | 0.612307 | 5_3:+57832633 | Msa0820460:CDS |
| GGTCGCGGAGGTGGTTTCCG+TGG | 0.616834 | 5_3:+57836250 | Msa0820460:CDS |
| ATGTAGTCCGAGAGTGCACA+AGG | 0.618575 | 5_3:+57836196 | Msa0820460:intron |
| CTTTCTTCAAAACTTATAGG+CGG | 0.620972 | 5_3:+57829600 | Msa0820460:CDS |
| AAGGTACAGACACGTCTCAA+GGG | 0.621195 | 5_3:+57828073 | Msa0820460:CDS |
| TTTCATCCACACTTAAGACC+AGG | 0.622642 | 5_3:-57834920 | None:intergenic |
| AGCTTGCCTGGTCTTAAGTG+TGG | 0.623799 | 5_3:+57834914 | Msa0820460:CDS |
| ATCTACGCATTCCTCGTCCA+CGG | 0.629446 | 5_3:-57836273 | None:intergenic |
| AGAGTTGCTGCTGCAACTGG+GGG | 0.633739 | 5_3:+57832184 | Msa0820460:CDS |
| ATAGAAGACATGGTTGAAGA+CGG | 0.635825 | 5_3:-57827931 | None:intergenic |
| GACATGGTTGAAGACGGTGA+TGG | 0.638234 | 5_3:-57827925 | None:intergenic |
| CCACATGTAACAGACCTGAT+CGG | 0.638379 | 5_3:-57832457 | None:intergenic |
| TACCAGAAACATACATCCAG+TGG | 0.644183 | 5_3:-57836363 | None:intergenic |
| TAGGGTGGTTCGAACGACAT+CGG | 0.648371 | 5_3:-57828139 | None:intergenic |
| TTATGTAGTAATCTATGGGA+AGG | 0.650704 | 5_3:+57836651 | Msa0820460:three_prime_UTR |
| GAGTCGCGCATGTTACCACC+AGG | 0.652404 | 5_3:-57831576 | None:intergenic |
| GCTTACCAGCATAGAAGACA+TGG | 0.652653 | 5_3:-57827941 | None:intergenic |
| TCCACCACGGAGAACTATGG+TGG | 0.654944 | 5_3:-57832433 | None:intergenic |
| TGAATCAGCAATTCCACCAG+TGG | 0.658303 | 5_3:-57834742 | None:intergenic |
| GCCACCATAGTTCTCCGTGG+TGG | 0.660027 | 5_3:+57832432 | Msa0820460:CDS |
| GGGGTCGACATAGCCACTGG+TGG | 0.660282 | 5_3:+57834729 | Msa0820460:CDS |
| TCTCTTCTACAGGTTCCTGG+TGG | 0.662294 | 5_3:+57831561 | Msa0820460:intron |
| TCTGTCACCATTTCTAACGA+CGG | 0.662631 | 5_3:+57828204 | Msa0820460:CDS |
| GCATTGTCACATAATTGCCG+GGG | 0.690605 | 5_3:-57833660 | None:intergenic |
| GCTGCTGCAAGTGCCATGGG+AGG | 0.694649 | 5_3:+57836223 | Msa0820460:CDS |
| TGACAGAACCTTTATCATCG+TGG | 0.697727 | 5_3:-57828188 | None:intergenic |
| AGACCTGATCGGCTCCACCA+CGG | 0.698398 | 5_3:-57832446 | None:intergenic |
| ATGGGAGGTAGAGGTCGCGG+AGG | 0.700320 | 5_3:+57836238 | Msa0820460:CDS |
| CATACCGCGAGGACCTAGGG+TGG | 0.704746 | 5_3:-57828154 | None:intergenic |
| CGAACCACCCTAGGTCCTCG+CGG | 0.746042 | 5_3:+57828150 | Msa0820460:CDS |
| ACAGCCACCATAGTTCTCCG+TGG | 0.750108 | 5_3:+57832429 | Msa0820460:CDS |
| ATGAGTTTGTCCATACCGCG+AGG | 0.761718 | 5_3:-57828165 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATATGTAAAAAAAATAT+TGG | + | chr5_3:57830750-57830769 | Msa0820460:intron | 10.0% |
| !! | TGTAATTAAACATATTTAAT+AGG | + | chr5_3:57832501-57832520 | Msa0820460:intron | 10.0% |
| !!! | AAAATGAAAAAAGTATATAT+TGG | - | chr5_3:57833547-57833566 | None:intergenic | 10.0% |
| !! | TATTTAATGTACATAAAAAA+TGG | - | chr5_3:57835979-57835998 | None:intergenic | 10.0% |
| !!! | AAAACTATTTACATTTTTAT+GGG | - | chr5_3:57836070-57836089 | None:intergenic | 10.0% |
| !!! | AAAAACTATTTACATTTTTA+TGG | - | chr5_3:57836071-57836090 | None:intergenic | 10.0% |
| !! | TCAATAGAAAAGAAATTATT+AGG | + | chr5_3:57829791-57829810 | Msa0820460:intron | 15.0% |
| !!! | TATTTTTTTTACATATTTGC+AGG | - | chr5_3:57830749-57830768 | None:intergenic | 15.0% |
| !! | AAAAAACTTTCTTTATTGTT+AGG | - | chr5_3:57830902-57830921 | None:intergenic | 15.0% |
| !!! | TCATATATGTTTTTGTTTTA+TGG | + | chr5_3:57831459-57831478 | Msa0820460:intron | 15.0% |
| !!! | ACATTAAGTAATAGTATTTT+TGG | - | chr5_3:57831681-57831700 | None:intergenic | 15.0% |
| !!! | AACAAACAAATTTGAAATAT+TGG | - | chr5_3:57831749-57831768 | None:intergenic | 15.0% |
| !! | GAATATTATTTATGACAAAT+TGG | + | chr5_3:57831896-57831915 | Msa0820460:intron | 15.0% |
| !! | GACTAAAATAATAGAATATT+AGG | - | chr5_3:57833016-57833035 | None:intergenic | 15.0% |
| !! | AGTCATATATCTTTAAATTA+AGG | + | chr5_3:57833032-57833051 | Msa0820460:intron | 15.0% |
| !! | GTCATATATCTTTAAATTAA+GGG | + | chr5_3:57833033-57833052 | Msa0820460:intron | 15.0% |
| !!! | GAAAATTTTATACACAAAAA+GGG | - | chr5_3:57833412-57833431 | None:intergenic | 15.0% |
| !!! | AGAAAATTTTATACACAAAA+AGG | - | chr5_3:57833413-57833432 | None:intergenic | 15.0% |
| !!! | CATTATATGCAATTAATTTT+GGG | - | chr5_3:57833449-57833468 | None:intergenic | 15.0% |
| !! | GATAATTAATTATTGTTGTA+AGG | - | chr5_3:57833997-57834016 | None:intergenic | 15.0% |
| !! | ACTTATTAAAACAAATTATG+TGG | - | chr5_3:57834025-57834044 | None:intergenic | 15.0% |
| !! | TACATTATTGTATAACAATA+TGG | - | chr5_3:57834451-57834470 | None:intergenic | 15.0% |
| !!! | ATCAAATACTTATTTGTTTT+GGG | + | chr5_3:57835329-57835348 | Msa0820460:intron | 15.0% |
| !!! | TTTATTTTATAGAAGGAATA+AGG | - | chr5_3:57835479-57835498 | None:intergenic | 15.0% |
| !!! | GAACTTTTTTATTTTATAGA+AGG | - | chr5_3:57835486-57835505 | None:intergenic | 15.0% |
| !! | ATTAATTGTTGCATAATTAA+TGG | + | chr5_3:57835824-57835843 | Msa0820460:intron | 15.0% |
| !! | TTAATTGTTGCATAATTAAT+GGG | + | chr5_3:57835825-57835844 | Msa0820460:intron | 15.0% |
| !!! | TATTTGTTAATTTTATACGT+TGG | + | chr5_3:57836519-57836538 | Msa0820460:three_prime_UTR | 15.0% |
| !! | CAACTTAAATAAGAACTTAT+AGG | + | chr5_3:57828517-57828536 | Msa0820460:intron | 20.0% |
| !! | TACATAAACACTAATATGAT+AGG | - | chr5_3:57828550-57828569 | None:intergenic | 20.0% |
| !! | TTCACTCTCAAAATTTAATA+CGG | + | chr5_3:57829355-57829374 | Msa0820460:CDS | 20.0% |
| !! | AAAATTTAATACGGAGTTAT+AGG | + | chr5_3:57829364-57829383 | Msa0820460:CDS | 20.0% |
| !! | CCTGTATAAATTATTATACA+CGG | - | chr5_3:57829488-57829507 | None:intergenic | 20.0% |
| !!! | TTAGTACATTATCTCTTTTA+TGG | + | chr5_3:57829748-57829767 | Msa0820460:intron | 20.0% |
| !!! | ATTACGTAGAATTTTATATC+TGG | + | chr5_3:57830104-57830123 | Msa0820460:intron | 20.0% |
| !! | TTGTGAAAAAAAACATTTGA+TGG | + | chr5_3:57830170-57830189 | Msa0820460:intron | 20.0% |
| !! | TTATTAGAATGGTGATTATA+TGG | - | chr5_3:57830328-57830347 | None:intergenic | 20.0% |
| !! | TGAAACTTGATTAAAATGTT+CGG | - | chr5_3:57830510-57830529 | None:intergenic | 20.0% |
| !! | GATTGTTCATAAAATGTAAT+AGG | + | chr5_3:57830772-57830791 | Msa0820460:intron | 20.0% |
| !!! | TAAGCAATTTAGTTTTCTTT+AGG | + | chr5_3:57831497-57831516 | Msa0820460:intron | 20.0% |
| !! | AAACTACTTATTAATTTACG+TGG | - | chr5_3:57832082-57832101 | None:intergenic | 20.0% |
| !!! | TTTTTTACTTATTTGCTTGA+AGG | + | chr5_3:57832323-57832342 | Msa0820460:intron | 20.0% |
| !! | GACTGTTAAATATTAAAATG+TGG | + | chr5_3:57832719-57832738 | Msa0820460:intron | 20.0% |
| !! | AATATTAAAATGTGGTTATG+TGG | + | chr5_3:57832727-57832746 | Msa0820460:intron | 20.0% |
| !!! | AAGTTTTTGTAAACTAGATA+TGG | + | chr5_3:57832855-57832874 | Msa0820460:intron | 20.0% |
| !! | GACTAAAACAATAGAATATT+AGG | - | chr5_3:57832900-57832919 | None:intergenic | 20.0% |
| !! | AGTCATATATCTTGAAATTA+AGG | + | chr5_3:57832916-57832935 | Msa0820460:intron | 20.0% |
| !! | GTCATATATCTTGAAATTAA+GGG | + | chr5_3:57832917-57832936 | Msa0820460:intron | 20.0% |
| !!! | AAGTTTTTGTAAACTAGATA+TGG | + | chr5_3:57832855-57832874 | Msa0820460:intron | 20.0% |
| !! | AGAATGATTGAAAATTTGAT+TGG | - | chr5_3:57833143-57833162 | None:intergenic | 20.0% |
| !!! | AATCATTCTAGAAAATTTTC+AGG | + | chr5_3:57833154-57833173 | Msa0820460:intron | 20.0% |
| !! | CTTTATTATTGCATTATTGT+GGG | + | chr5_3:57833357-57833376 | Msa0820460:intron | 20.0% |
| !!! | GCATTATATGCAATTAATTT+TGG | - | chr5_3:57833450-57833469 | None:intergenic | 20.0% |
| !!! | ATTTTTGAAATCACTATTTC+AGG | + | chr5_3:57833562-57833581 | Msa0820460:intron | 20.0% |
| !!! | GATAAATTTTTCTATGATGA+TGG | - | chr5_3:57834338-57834357 | None:intergenic | 20.0% |
| !! | ATCATAGAAAAATTTATCGA+AGG | + | chr5_3:57834340-57834359 | Msa0820460:intron | 20.0% |
| !! | TCATAGAAAAATTTATCGAA+GGG | + | chr5_3:57834341-57834360 | Msa0820460:intron | 20.0% |
| !! | AATTATGTAATAAAGCAGTT+TGG | - | chr5_3:57834387-57834406 | None:intergenic | 20.0% |
| !! | TGTTATACAATAATGTAATC+AGG | + | chr5_3:57834454-57834473 | Msa0820460:intron | 20.0% |
| !! | TAAATATAAACTGATAGAGA+CGG | - | chr5_3:57834975-57834994 | None:intergenic | 20.0% |
| !! | CAAAACAAATAAGTATTTGA+TGG | - | chr5_3:57835330-57835349 | None:intergenic | 20.0% |
| !!! | CATCAAATACTTATTTGTTT+TGG | + | chr5_3:57835328-57835347 | Msa0820460:intron | 20.0% |
| !!! | TCAAATACTTATTTGTTTTG+GGG | + | chr5_3:57835330-57835349 | Msa0820460:intron | 20.0% |
| !! | TTTCTCATTAAAATCAATGA+AGG | - | chr5_3:57835728-57835747 | None:intergenic | 20.0% |
| !! | TAATTATGCAACAATTAATC+AGG | - | chr5_3:57835823-57835842 | None:intergenic | 20.0% |
| !! | AAATAACATAATCCTAGAAT+AGG | - | chr5_3:57836107-57836126 | None:intergenic | 20.0% |
| !! | TTTCACTAATTTAAAGAAGT+AGG | + | chr5_3:57836125-57836144 | Msa0820460:intron | 20.0% |
| !! | TATCTAAATACTTAGTGTTA+AGG | - | chr5_3:57836608-57836627 | None:intergenic | 20.0% |
| !! | CTAATTCATTTCTGAAAATG+CGG | + | chr5_3:57828012-57828031 | Msa0820460:intron | 25.0% |
| ! | ATATTACTCTTTGCTTAGAT+CGG | + | chr5_3:57828401-57828420 | Msa0820460:intron | 25.0% |
| !!! | AACACAAACTTTTTTGTGTA+AGG | + | chr5_3:57828601-57828620 | Msa0820460:intron | 25.0% |
| ! | TTATTTCCATAAGTTCTCTA+GGG | - | chr5_3:57828649-57828668 | None:intergenic | 25.0% |
| ! | CATTCTATAGCAAAAGATTA+AGG | + | chr5_3:57828755-57828774 | Msa0820460:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr5_3:57828781-57828800 | None:intergenic | 25.0% |
| ! | TTATTTGCATAAGTTCTCTA+GGG | - | chr5_3:57829086-57829105 | None:intergenic | 25.0% |
| ! | CCGTGTATAATAATTTATAC+AGG | + | chr5_3:57829485-57829504 | Msa0820460:intron | 25.0% |
| ! | ACACTTTCTTCAAAACTTAT+AGG | + | chr5_3:57829597-57829616 | Msa0820460:CDS | 25.0% |
| ! | AAACATGATTGGAATAAAGA+AGG | + | chr5_3:57829689-57829708 | Msa0820460:CDS | 25.0% |
| ! | AAAAGAGATAATGTACTAAC+TGG | - | chr5_3:57829747-57829766 | None:intergenic | 25.0% |
| ! | GAACTAATGTGTTTCATAAT+TGG | + | chr5_3:57830013-57830032 | Msa0820460:intron | 25.0% |
| !!! | CATTTGAAGATTTTTAAAGC+CGG | + | chr5_3:57830285-57830304 | Msa0820460:intron | 25.0% |
| ! | TGCAAAAATAGTAACTGTTT+GGG | - | chr5_3:57830445-57830464 | None:intergenic | 25.0% |
| ! | TGATTAAAATGTTCGGAAAT+GGG | - | chr5_3:57830503-57830522 | None:intergenic | 25.0% |
| ! | TTGATTAAAATGTTCGGAAA+TGG | - | chr5_3:57830504-57830523 | None:intergenic | 25.0% |
| !! | GATACATTTCAATTGATAGT+AGG | + | chr5_3:57830693-57830712 | Msa0820460:intron | 25.0% |
| ! | CATAAAATGTAATAGGAAGT+TGG | + | chr5_3:57830779-57830798 | Msa0820460:intron | 25.0% |
| ! | AATTAGATAACTGTAAGCTA+CGG | + | chr5_3:57831006-57831025 | Msa0820460:intron | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | + | chr5_3:57831315-57831334 | Msa0820460:intron | 25.0% |
| !!! | TTTAGGTACTTTTTTTTGTG+TGG | + | chr5_3:57831514-57831533 | Msa0820460:intron | 25.0% |
| ! | ATATGAAAATGTCTTCTTGA+AGG | - | chr5_3:57831622-57831641 | None:intergenic | 25.0% |
| ! | ACTATTACTTAATGTTGAGT+TGG | + | chr5_3:57831686-57831705 | Msa0820460:CDS | 25.0% |
| ! | AACTAAAACTTGATCTAATG+AGG | - | chr5_3:57832018-57832037 | None:intergenic | 25.0% |
| ! | TGTCAATAACATTATTGATG+AGG | + | chr5_3:57832222-57832241 | Msa0820460:CDS | 25.0% |
| !!! | TATTTTTTCACAGTTCATAG+AGG | + | chr5_3:57832557-57832576 | Msa0820460:intron | 25.0% |
| !!! | AATTTTGTTGTGCATTTCAT+TGG | + | chr5_3:57832685-57832704 | Msa0820460:intron | 25.0% |
| ! | CATTTCATTGGATTATGATA+GGG | + | chr5_3:57832697-57832716 | Msa0820460:intron | 25.0% |
| !! | AAGCATAGTATTTTCAATTG+CGG | - | chr5_3:57833340-57833359 | None:intergenic | 25.0% |
| !! | GCTTTATTATTGCATTATTG+TGG | + | chr5_3:57833356-57833375 | Msa0820460:intron | 25.0% |
| !! | CAAATTTAATGTGTTATTGC+AGG | + | chr5_3:57833632-57833651 | Msa0820460:intron | 25.0% |
| ! | CAATGATCTTATATTCAACT+AGG | - | chr5_3:57833839-57833858 | None:intergenic | 25.0% |
| ! | CTAGTTGAATATAAGATCAT+TGG | + | chr5_3:57833837-57833856 | Msa0820460:intron | 25.0% |
| ! | TGGAGGTTATAATATGTTAA+AGG | + | chr5_3:57833888-57833907 | Msa0820460:intron | 25.0% |
| ! | TTAAAACAATTTGCATGAAC+AGG | + | chr5_3:57834203-57834222 | Msa0820460:intron | 25.0% |
| !! | AGTTAATACATTCTGAAAGT+GGG | - | chr5_3:57834239-57834258 | None:intergenic | 25.0% |
| !! | TAGTTAATACATTCTGAAAG+TGG | - | chr5_3:57834240-57834259 | None:intergenic | 25.0% |
| ! | TCAAGAGGAAATAAATAAAG+TGG | - | chr5_3:57834302-57834321 | None:intergenic | 25.0% |
| ! | TGAAACAGTTAAAAATCCTA+AGG | + | chr5_3:57834938-57834957 | Msa0820460:CDS | 25.0% |
| !!! | TGTTTTGGTTAATATTTCCT+AGG | + | chr5_3:57835011-57835030 | Msa0820460:intron | 25.0% |
| !!! | GTTTTGGTTAATATTTCCTA+GGG | + | chr5_3:57835012-57835031 | Msa0820460:intron | 25.0% |
| !! | TGACACATTTCTTTTTGTAA+AGG | + | chr5_3:57835070-57835089 | Msa0820460:intron | 25.0% |
| !!! | AAAGGATTTTTTCTACTCTA+AGG | + | chr5_3:57835088-57835107 | Msa0820460:intron | 25.0% |
| !!! | AAGGATTTTTTCTACTCTAA+GGG | + | chr5_3:57835089-57835108 | Msa0820460:intron | 25.0% |
| !! | CCATACAAATTTCTTTTACT+CGG | + | chr5_3:57835281-57835300 | Msa0820460:intron | 25.0% |
| !! | GATGAAAAATATTCTGGAAA+TGG | - | chr5_3:57835444-57835463 | None:intergenic | 25.0% |
| ! | AATTCACTTATCTTGACTAA+GGG | - | chr5_3:57835508-57835527 | None:intergenic | 25.0% |
| ! | TAATTCACTTATCTTGACTA+AGG | - | chr5_3:57835509-57835528 | None:intergenic | 25.0% |
| ! | TGCTAATATCAAAGCAAATT+GGG | - | chr5_3:57835646-57835665 | None:intergenic | 25.0% |
| ! | CATCATTTGTACAATGTAAA+AGG | - | chr5_3:57835785-57835804 | None:intergenic | 25.0% |
| !!! | TACATTGATTTACAGAATTG+TGG | + | chr5_3:57835930-57835949 | Msa0820460:intron | 25.0% |
| ! | TGATTAGAAATGTGTTCTAA+TGG | + | chr5_3:57836295-57836314 | Msa0820460:exon | 25.0% |
| ! | GATTAGAAATGTGTTCTAAT+GGG | + | chr5_3:57836296-57836315 | Msa0820460:exon | 25.0% |
| ! | TTTATCTACAGATGTTGATA+TGG | + | chr5_3:57836408-57836427 | Msa0820460:three_prime_UTR | 25.0% |
| !! | TTGTTAATTTTATACGTTGG+AGG | + | chr5_3:57836522-57836541 | Msa0820460:three_prime_UTR | 25.0% |
| !! | TGTTAATTTTATACGTTGGA+GGG | + | chr5_3:57836523-57836542 | Msa0820460:three_prime_UTR | 25.0% |
| ! | CGCATTTTCAGAAATGAATT+AGG | - | chr5_3:57828014-57828033 | None:intergenic | 30.0% |
| TTTCTGCAAAATGATGAGAT+CGG | - | chr5_3:57828339-57828358 | None:intergenic | 30.0% | |
| TTGTATTTGTTTCGTTCAGA+TGG | + | chr5_3:57828456-57828475 | Msa0820460:intron | 30.0% | |
| ! | GTTCAGATGGTTAAGATTTT+TGG | + | chr5_3:57828469-57828488 | Msa0820460:intron | 30.0% |
| CTTATTTCCATAAGTTCTCT+AGG | - | chr5_3:57828650-57828669 | None:intergenic | 30.0% | |
| TTATTTGTAGCTTATAGCAC+AGG | + | chr5_3:57828796-57828815 | Msa0820460:intron | 30.0% | |
| ! | TACGTTTTGTGACATTGTTT+TGG | - | chr5_3:57828975-57828994 | None:intergenic | 30.0% |
| AAAACAATGTCACAAAACGT+AGG | + | chr5_3:57828974-57828993 | Msa0820460:intron | 30.0% | |
| ! | CGTAAAAGTTCAAGTTTACT+TGG | - | chr5_3:57829037-57829056 | None:intergenic | 30.0% |
| CTTATTTGCATAAGTTCTCT+AGG | - | chr5_3:57829087-57829106 | None:intergenic | 30.0% | |
| GCTAAAATGAGCTTATCTAT+TGG | - | chr5_3:57829180-57829199 | None:intergenic | 30.0% | |
| CACTTAGAGCTTAATTGAAT+TGG | - | chr5_3:57829202-57829221 | None:intergenic | 30.0% | |
| TGAGATATAAGTACATACCA+AGG | - | chr5_3:57829400-57829419 | None:intergenic | 30.0% | |
| ! | GAAGAGAAGAAAAATTTGCT+TGG | + | chr5_3:57829558-57829577 | Msa0820460:CDS | 30.0% |
| CTTTCTTCAAAACTTATAGG+CGG | + | chr5_3:57829600-57829619 | Msa0820460:CDS | 30.0% | |
| AAAGGAATTCTTTGCATCTA+TGG | + | chr5_3:57829626-57829645 | Msa0820460:CDS | 30.0% | |
| GATGATAGGTTAAACATGAT+TGG | + | chr5_3:57829678-57829697 | Msa0820460:CDS | 30.0% | |
| ! | GTACATTATCTCTTTTATGG+TGG | + | chr5_3:57829751-57829770 | Msa0820460:intron | 30.0% |
| ACACATTTATGCAAAGTGAT+TGG | - | chr5_3:57829900-57829919 | None:intergenic | 30.0% | |
| !! | ATAGAATTTTGAGTGCACTT+TGG | + | chr5_3:57830042-57830061 | Msa0820460:intron | 30.0% |
| TTCGTTAAAATGATATCCAC+TGG | - | chr5_3:57830256-57830275 | None:intergenic | 30.0% | |
| ACTGTTTGGGAAATTAATTG+AGG | - | chr5_3:57830432-57830451 | None:intergenic | 30.0% | |
| CTGCAAAAATAGTAACTGTT+TGG | - | chr5_3:57830446-57830465 | None:intergenic | 30.0% | |
| TTTGCAGTTCTCTAAATATG+TGG | + | chr5_3:57830459-57830478 | Msa0820460:intron | 30.0% | |
| AAACTAGGTAACCTTTATTG+AGG | - | chr5_3:57830614-57830633 | None:intergenic | 30.0% | |
| CATAGATTCAAACAAATGGT+GGG | - | chr5_3:57831256-57831275 | None:intergenic | 30.0% | |
| TCATAGATTCAAACAAATGG+TGG | - | chr5_3:57831257-57831276 | None:intergenic | 30.0% | |
| GCTTCATAGATTCAAACAAA+TGG | - | chr5_3:57831260-57831279 | None:intergenic | 30.0% | |
| TTGTTTGAATCTATGAAGCA+CGG | + | chr5_3:57831261-57831280 | Msa0820460:intron | 30.0% | |
| TTTGAACTGTATCACTAACT+AGG | + | chr5_3:57831415-57831434 | Msa0820460:intron | 30.0% | |
| ! | AAGAAGACATTTTCATATGC+TGG | + | chr5_3:57831624-57831643 | Msa0820460:CDS | 30.0% |
| AGAAAGAAAATGCCGAAATA+AGG | + | chr5_3:57831721-57831740 | Msa0820460:CDS | 30.0% | |
| ! | GAAATATTGGCACCTTATTT+CGG | - | chr5_3:57831736-57831755 | None:intergenic | 30.0% |
| !!! | TTTTGTGTTCGTTGATTTTG+AGG | + | chr5_3:57831767-57831786 | Msa0820460:intron | 30.0% |
| AATCAATTGTTGATGCAGAA+TGG | + | chr5_3:57831874-57831893 | Msa0820460:intron | 30.0% | |
| ATGAGGTTGTGTATTATTAG+TGG | + | chr5_3:57832239-57832258 | Msa0820460:intron | 30.0% | |
| TGAGGTTGTGTATTATTAGT+GGG | + | chr5_3:57832240-57832259 | Msa0820460:intron | 30.0% | |
| !! | ATTTTTGAGGAAAAGCAAGT+AGG | + | chr5_3:57832363-57832382 | Msa0820460:CDS | 30.0% |
| TTTAATAGGATCTGCCATTA+TGG | + | chr5_3:57832515-57832534 | Msa0820460:intron | 30.0% | |
| TTAATAGGATCTGCCATTAT+GGG | + | chr5_3:57832516-57832535 | Msa0820460:intron | 30.0% | |
| ACTTAAATATGTGCCCATAA+TGG | - | chr5_3:57832532-57832551 | None:intergenic | 30.0% | |
| ATGCAATCATGATTGTTAGA+AGG | + | chr5_3:57832601-57832620 | Msa0820460:CDS | 30.0% | |
| TGCAATCATGATTGTTAGAA+GGG | + | chr5_3:57832602-57832621 | Msa0820460:CDS | 30.0% | |
| GCATTTCATTGGATTATGAT+AGG | + | chr5_3:57832696-57832715 | Msa0820460:intron | 30.0% | |
| AAACTAGATATGGTCTATAG+TGG | + | chr5_3:57832865-57832884 | Msa0820460:intron | 30.0% | |
| AAACTAGATATGGTCTATAG+TGG | + | chr5_3:57832865-57832884 | Msa0820460:intron | 30.0% | |
| !! | ATATTTTGGATAGCAGACAA+CGG | - | chr5_3:57833236-57833255 | None:intergenic | 30.0% |
| ! | TGCTATTTGACAAGATTGAT+GGG | - | chr5_3:57833260-57833279 | None:intergenic | 30.0% |
| !! | TTGCTATTTGACAAGATTGA+TGG | - | chr5_3:57833261-57833280 | None:intergenic | 30.0% |
| TCTTGTCAAATAGCAACTAT+AGG | + | chr5_3:57833265-57833284 | Msa0820460:intron | 30.0% | |
| CTTGTCAAATAGCAACTATA+GGG | + | chr5_3:57833266-57833285 | Msa0820460:intron | 30.0% | |
| TATTATTGCATTATTGTGGG+AGG | + | chr5_3:57833360-57833379 | Msa0820460:intron | 30.0% | |
| AGAGAATGTTCAAAATCACA+AGG | - | chr5_3:57833472-57833491 | None:intergenic | 30.0% | |
| TTACTACATATACCTGCATT+TGG | + | chr5_3:57833779-57833798 | Msa0820460:intron | 30.0% | |
| ATCTTATATTCAACTAGGCT+TGG | - | chr5_3:57833834-57833853 | None:intergenic | 30.0% | |
| GTTATAATATGTTAAAGGCC+TGG | + | chr5_3:57833893-57833912 | Msa0820460:intron | 30.0% | |
| GCAGCTTAACTCAAATAAAA+TGG | - | chr5_3:57834101-57834120 | None:intergenic | 30.0% | |
| ATGCTTAGAAATTAGATTCG+TGG | + | chr5_3:57834134-57834153 | Msa0820460:intron | 30.0% | |
| AGAAATTAGATTCGTGGATT+TGG | + | chr5_3:57834140-57834159 | Msa0820460:intron | 30.0% | |
| TCCAATCAACATATACTTGA+TGG | - | chr5_3:57834275-57834294 | None:intergenic | 30.0% | |
| AAGGGTTTGAATGAACTAAA+TGG | - | chr5_3:57834415-57834434 | None:intergenic | 30.0% | |
| AATGCATTTACAGATATGTC+AGG | - | chr5_3:57834613-57834632 | None:intergenic | 30.0% | |
| TCCAATTCTAATGTTCTATG+TGG | + | chr5_3:57834831-57834850 | Msa0820460:intron | 30.0% | |
| TCCACATAGAACATTAGAAT+TGG | - | chr5_3:57834835-57834854 | None:intergenic | 30.0% | |
| ATTCTAATGTTCTATGTGGA+TGG | + | chr5_3:57834835-57834854 | Msa0820460:intron | 30.0% | |
| ! | CAAAACAAAAGTGCAATCAT+CGG | - | chr5_3:57834998-57835017 | None:intergenic | 30.0% |
| ATGAAATTTCAACATACCCT+AGG | - | chr5_3:57835031-57835050 | None:intergenic | 30.0% | |
| CAAAAAGAAATGTGTCAAAC+AGG | - | chr5_3:57835067-57835086 | None:intergenic | 30.0% | |
| !!! | AGGATTTTTTCTACTCTAAG+GGG | + | chr5_3:57835090-57835109 | Msa0820460:intron | 30.0% |
| ATAGCATGGTACATATTCAA+AGG | - | chr5_3:57835136-57835155 | None:intergenic | 30.0% | |
| ACAATGCTTAAAAGACAACA+AGG | - | chr5_3:57835211-57835230 | None:intergenic | 30.0% | |
| CCGAGTAAAAGAAATTTGTA+TGG | - | chr5_3:57835284-57835303 | None:intergenic | 30.0% | |
| !!! | ACTTATTTGTTTTGGGGTAA+TGG | + | chr5_3:57835336-57835355 | Msa0820460:intron | 30.0% |
| TTCCTTAATTCATGTGGATT+GGG | + | chr5_3:57835366-57835385 | Msa0820460:intron | 30.0% | |
| AGAAGGAATAAGGTCAAATT+GGG | - | chr5_3:57835469-57835488 | None:intergenic | 30.0% | |
| TAGAAGGAATAAGGTCAAAT+TGG | - | chr5_3:57835470-57835489 | None:intergenic | 30.0% | |
| AGTATCAGATACACAATTCT+TGG | - | chr5_3:57835622-57835641 | None:intergenic | 30.0% | |
| GTGCTAATATCAAAGCAAAT+TGG | - | chr5_3:57835647-57835666 | None:intergenic | 30.0% | |
| !! | AAACTGACTGTAGTCATTTT+TGG | + | chr5_3:57835854-57835873 | Msa0820460:intron | 30.0% |
| ATTCTTGCGATGATTTAAGT+TGG | + | chr5_3:57835882-57835901 | Msa0820460:intron | 30.0% | |
| ! | TTCTTGCGATGATTTAAGTT+GGG | + | chr5_3:57835883-57835902 | Msa0820460:intron | 30.0% |
| AAGTTCAAAAGTCACATTGA+GGG | - | chr5_3:57835910-57835929 | None:intergenic | 30.0% | |
| AAAGTTCAAAAGTCACATTG+AGG | - | chr5_3:57835911-57835930 | None:intergenic | 30.0% | |
| ! | TACATTTTTATGGGACACAT+GGG | - | chr5_3:57836061-57836080 | None:intergenic | 30.0% |
| ! | TTACATTTTTATGGGACACA+TGG | - | chr5_3:57836062-57836081 | None:intergenic | 30.0% |
| GAAGTAGGAAACAACATTTA+TGG | + | chr5_3:57836140-57836159 | Msa0820460:intron | 30.0% | |
| GATGTTGATATGGTATGAAA+TGG | + | chr5_3:57836418-57836437 | Msa0820460:three_prime_UTR | 30.0% | |
| GGTATGAAATGGTAATATTG+AGG | + | chr5_3:57836429-57836448 | Msa0820460:three_prime_UTR | 30.0% | |
| ATGGTAATATTGAGGATTCT+AGG | + | chr5_3:57836437-57836456 | Msa0820460:three_prime_UTR | 30.0% | |
| ! | GTTAATTTTATACGTTGGAG+GGG | + | chr5_3:57836524-57836543 | Msa0820460:three_prime_UTR | 30.0% |
| ATTTATTAGATGGCTGTTGT+TGG | + | chr5_3:57836551-57836570 | Msa0820460:three_prime_UTR | 30.0% | |
| TTTATTAGATGGCTGTTGTT+GGG | + | chr5_3:57836552-57836571 | Msa0820460:three_prime_UTR | 30.0% | |
| !! | TAGCCTTATGTAGTAATCTA+TGG | + | chr5_3:57836646-57836665 | Msa0820460:three_prime_UTR | 30.0% |
| ! | AGCCTTATGTAGTAATCTAT+GGG | + | chr5_3:57836647-57836666 | Msa0820460:three_prime_UTR | 30.0% |
| TTCCCATAGATTACTACATA+AGG | - | chr5_3:57836652-57836671 | None:intergenic | 30.0% | |
| TTATGTAGTAATCTATGGGA+AGG | + | chr5_3:57836651-57836670 | Msa0820460:three_prime_UTR | 30.0% | |
| TTCTCACACTGCAAAAAAGA+AGG | + | chr5_3:57827835-57827854 | Msa0820460:five_prime_UTR | 35.0% | |
| !!! | TTTTTTCGAGTACCAGTTTC+TGG | - | chr5_3:57827863-57827882 | None:intergenic | 35.0% |
| AGGAAGAGAGAGAGTTATTA+GGG | - | chr5_3:57827902-57827921 | None:intergenic | 35.0% | |
| ATAGAAGACATGGTTGAAGA+CGG | - | chr5_3:57827934-57827953 | None:intergenic | 35.0% | |
| TCTTTCAGTAGTATGATCTG+TGG | - | chr5_3:57828054-57828073 | None:intergenic | 35.0% | |
| CAGATCATACTACTGAAAGA+AGG | + | chr5_3:57828054-57828073 | Msa0820460:CDS | 35.0% | |
| AAACTCATCCACGATGATAA+AGG | + | chr5_3:57828180-57828199 | Msa0820460:CDS | 35.0% | |
| ! | AGTTGATATTGCTAAGTCTC+AGG | + | chr5_3:57828278-57828297 | Msa0820460:intron | 35.0% |
| ! | TGGAATTAAGCACGTGTTTT+TGG | + | chr5_3:57828489-57828508 | Msa0820460:intron | 35.0% |
| GAGAACTTATGGAAATAAGC+TGG | + | chr5_3:57828651-57828670 | Msa0820460:intron | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr5_3:57829010-57829029 | Msa0820460:intron | 35.0% | |
| !! | ATTGTTGTTTGTGACTGTGA+AGG | + | chr5_3:57829254-57829273 | Msa0820460:intron | 35.0% |
| TGAACACCATCTTCAATGAA+AGG | - | chr5_3:57829339-57829358 | None:intergenic | 35.0% | |
| CAGAAACATAACTTCACTCA+TGG | - | chr5_3:57829454-57829473 | None:intergenic | 35.0% | |
| ATTTATACAGGCGATTGAGA+AGG | + | chr5_3:57829497-57829516 | Msa0820460:intron | 35.0% | |
| ! | TAGCATTGAGGGAAAAAGTT+TGG | + | chr5_3:57829536-57829555 | Msa0820460:CDS | 35.0% |
| AAAACTTATAGGCGGAGAAA+AGG | + | chr5_3:57829608-57829627 | Msa0820460:CDS | 35.0% | |
| ATTCTTTGCATCTATGGTTG+TGG | + | chr5_3:57829632-57829651 | Msa0820460:CDS | 35.0% | |
| TAGGAAAATGAGTGCAAAAG+AGG | + | chr5_3:57829810-57829829 | Msa0820460:intron | 35.0% | |
| AAAATGAGTGCAAAAGAGGA+AGG | + | chr5_3:57829814-57829833 | Msa0820460:intron | 35.0% | |
| CGAGTGGCAATTTATTAGAA+TGG | - | chr5_3:57830339-57830358 | None:intergenic | 35.0% | |
| TGTTGTCAACATCGAGAAAT+GGG | - | chr5_3:57830387-57830406 | None:intergenic | 35.0% | |
| ATGTTGTCAACATCGAGAAA+TGG | - | chr5_3:57830388-57830407 | None:intergenic | 35.0% | |
| TAGGTAACCTTTATTGAGGA+GGG | - | chr5_3:57830610-57830629 | None:intergenic | 35.0% | |
| TGCAATGCAACATGAAAACT+AGG | - | chr5_3:57830629-57830648 | None:intergenic | 35.0% | |
| TTTACCCACAGATTCATAAG+TGG | + | chr5_3:57830671-57830690 | Msa0820460:intron | 35.0% | |
| GTATCCACTTATGAATCTGT+GGG | - | chr5_3:57830678-57830697 | None:intergenic | 35.0% | |
| TGTATCCACTTATGAATCTG+TGG | - | chr5_3:57830679-57830698 | None:intergenic | 35.0% | |
| TGATGCACAAGATATTGTAC+AGG | + | chr5_3:57830822-57830841 | Msa0820460:intron | 35.0% | |
| GATGCACAAGATATTGTACA+GGG | + | chr5_3:57830823-57830842 | Msa0820460:intron | 35.0% | |
| TCACTACCCATGAATAAGTA+GGG | + | chr5_3:57830953-57830972 | Msa0820460:intron | 35.0% | |
| GGTGGAATGAACAAGTAAAA+TGG | - | chr5_3:57831152-57831171 | None:intergenic | 35.0% | |
| !! | AAACAAATGGTGGGTCAATT+GGG | - | chr5_3:57831247-57831266 | None:intergenic | 35.0% |
| ACAGTTCAAAGTATGAAGCA+CGG | - | chr5_3:57831405-57831424 | None:intergenic | 35.0% | |
| AACTGTATCACTAACTAGGT+TGG | + | chr5_3:57831419-57831438 | Msa0820460:intron | 35.0% | |
| ! | TAGTGCTGCTATAATGATTC+AGG | + | chr5_3:57831537-57831556 | Msa0820460:intron | 35.0% |
| TTTGGATCGAGAAACTTCTT+GGG | - | chr5_3:57831663-57831682 | None:intergenic | 35.0% | |
| ! | TTTTGGATCGAGAAACTTCT+TGG | - | chr5_3:57831664-57831683 | None:intergenic | 35.0% |
| TGAAGAGTTGCTTAGTTATG+TGG | + | chr5_3:57831796-57831815 | Msa0820460:intron | 35.0% | |
| AGAACACGAGAAATAAGAGA+AGG | - | chr5_3:57831825-57831844 | None:intergenic | 35.0% | |
| ACAATTGATTGATACTGCGA+AGG | - | chr5_3:57831864-57831883 | None:intergenic | 35.0% | |
| TTGGATAAATGTGTCCAAAG+TGG | + | chr5_3:57831915-57831934 | Msa0820460:intron | 35.0% | |
| TCGGCAAAATACTGTTTCAA+AGG | - | chr5_3:57832118-57832137 | None:intergenic | 35.0% | |
| AGCACAGAAAATGTCTCTAT+CGG | - | chr5_3:57832137-57832156 | None:intergenic | 35.0% | |
| CTTATTTGCTTGAAGGTTCT+TGG | + | chr5_3:57832330-57832349 | Msa0820460:intron | 35.0% | |
| ! | TGGAACTTGTGAGATTTTTG+AGG | + | chr5_3:57832350-57832369 | Msa0820460:CDS | 35.0% |
| GAGAGATTCAACATCTTCAA+TGG | + | chr5_3:57832390-57832409 | Msa0820460:CDS | 35.0% | |
| AAGAATTCAACTGTAGTTGC+TGG | + | chr5_3:57832630-57832649 | Msa0820460:CDS | 35.0% | |
| ATGCACAACAAAATTCTGAG+TGG | - | chr5_3:57832680-57832699 | None:intergenic | 35.0% | |
| ATGTGGTTATTGTTGTCAGA+TGG | + | chr5_3:57832744-57832763 | Msa0820460:intron | 35.0% | |
| TTTAAATTAAGGGACTGCAG+TGG | + | chr5_3:57833043-57833062 | Msa0820460:intron | 35.0% | |
| !! | CAAGATTGATGGGCATATTT+TGG | - | chr5_3:57833250-57833269 | None:intergenic | 35.0% |
| ! | GTATTTTCAATTGCGGATCT+GGG | - | chr5_3:57833333-57833352 | None:intergenic | 35.0% |
| ! | AGTATTTTCAATTGCGGATC+TGG | - | chr5_3:57833334-57833353 | None:intergenic | 35.0% |
| AAATCACTATTTCAGGCATC+TGG | + | chr5_3:57833569-57833588 | Msa0820460:intron | 35.0% | |
| CAATCGTGCAAATAAAACGA+AGG | - | chr5_3:57833754-57833773 | None:intergenic | 35.0% | |
| AATTGGATACAAGTTCAAGC+TGG | + | chr5_3:57833868-57833887 | Msa0820460:intron | 35.0% | |
| GCCATCAAGTATATGTTGAT+TGG | + | chr5_3:57834271-57834290 | Msa0820460:intron | 35.0% | |
| !! | ATGATGATGGAGTGAAACAA+TGG | - | chr5_3:57834325-57834344 | None:intergenic | 35.0% |
| !! | TTAGTTTGTGCTGTCATACT+TGG | + | chr5_3:57834479-57834498 | Msa0820460:intron | 35.0% |
| AAACTTCTGAGTTCTTCTGA+TGG | + | chr5_3:57834649-57834668 | Msa0820460:intron | 35.0% | |
| AACTTCTGAGTTCTTCTGAT+GGG | + | chr5_3:57834650-57834669 | Msa0820460:intron | 35.0% | |
| ATTCATTTGCCAACTTTGTC+TGG | + | chr5_3:57834760-57834779 | Msa0820460:CDS | 35.0% | |
| TTCATTTGCCAACTTTGTCT+GGG | + | chr5_3:57834761-57834780 | Msa0820460:CDS | 35.0% | |
| GTAACACACATTTATTTGCG+TGG | + | chr5_3:57834801-57834820 | Msa0820460:intron | 35.0% | |
| !! | CGATGATTGCACTTTTGTTT+TGG | + | chr5_3:57834996-57835015 | Msa0820460:intron | 35.0% |
| !!! | GGATTTTTTCTACTCTAAGG+GGG | + | chr5_3:57835091-57835110 | Msa0820460:intron | 35.0% |
| GGAAAGAGTCAAATATAGCA+TGG | - | chr5_3:57835150-57835169 | None:intergenic | 35.0% | |
| CAAGGAAAGTTGAGAACAAT+TGG | - | chr5_3:57835193-57835212 | None:intergenic | 35.0% | |
| AGCATTGTTTACATATCACC+TGG | + | chr5_3:57835223-57835242 | Msa0820460:intron | 35.0% | |
| AGTATAGAGTCTAGTTGTCT+TGG | + | chr5_3:57835250-57835269 | Msa0820460:intron | 35.0% | |
| !! | ATAAGTATTTGATGGTGAGC+AGG | - | chr5_3:57835322-57835341 | None:intergenic | 35.0% |
| GATCAGTTCCTTAATTCATG+TGG | + | chr5_3:57835360-57835379 | Msa0820460:intron | 35.0% | |
| GTTCCTTAATTCATGTGGAT+TGG | + | chr5_3:57835365-57835384 | Msa0820460:intron | 35.0% | |
| ATCCCAATCCACATGAATTA+AGG | - | chr5_3:57835371-57835390 | None:intergenic | 35.0% | |
| ! | TCTGTCTTTTCTCACAACTA+AGG | - | chr5_3:57835395-57835414 | None:intergenic | 35.0% |
| AGTTGTGAGAAAAGACAGAA+TGG | + | chr5_3:57835396-57835415 | Msa0820460:intron | 35.0% | |
| TGGGACGATGAAAAATATTC+TGG | - | chr5_3:57835450-57835469 | None:intergenic | 35.0% | |
| AATGATTAAGCGAGGAAACA+GGG | - | chr5_3:57835559-57835578 | None:intergenic | 35.0% | |
| !!! | TGACTGTAGTCATTTTTGGT+TGG | + | chr5_3:57835858-57835877 | Msa0820460:intron | 35.0% |
| !! | TTCGCTAAGCTTGTTAGTTA+TGG | + | chr5_3:57836015-57836034 | Msa0820460:intron | 35.0% |
| CTGATCAAACTAGGATTTGA+TGG | + | chr5_3:57836468-57836487 | Msa0820460:three_prime_UTR | 35.0% | |
| GAGGGGTTGAATTTATTAGA+TGG | + | chr5_3:57836541-57836560 | Msa0820460:three_prime_UTR | 35.0% | |
| TTATTAGATGGCTGTTGTTG+GGG | + | chr5_3:57836553-57836572 | Msa0820460:three_prime_UTR | 35.0% | |
| AAAAAGAAGGAGCCAGAAAC+TGG | + | chr5_3:57827848-57827867 | Msa0820460:five_prime_UTR | 40.0% | |
| GAGGAAGAGAGAGAGTTATT+AGG | - | chr5_3:57827903-57827922 | None:intergenic | 40.0% | |
| TTCAACCATGTCTTCTATGC+TGG | + | chr5_3:57827936-57827955 | Msa0820460:exon | 40.0% | |
| AACGAGTAACGAAGAAGAGT+TGG | - | chr5_3:57827974-57827993 | None:intergenic | 40.0% | |
| ! | CATTTCTGAAAATGCGGTTG+TGG | + | chr5_3:57828018-57828037 | Msa0820460:intron | 40.0% |
| ! | TTGATGTTGCTTACGAGTTG+TGG | - | chr5_3:57828102-57828121 | None:intergenic | 40.0% |
| TGACAGAACCTTTATCATCG+TGG | - | chr5_3:57828191-57828210 | None:intergenic | 40.0% | |
| TCTGTCACCATTTCTAACGA+CGG | + | chr5_3:57828204-57828223 | Msa0820460:CDS | 40.0% | |
| ATCAACTAAGATCTTCGCAG+CGG | - | chr5_3:57828265-57828284 | None:intergenic | 40.0% | |
| AAGCTACCCTAGAGAACTTA+TGG | + | chr5_3:57828640-57828659 | Msa0820460:intron | 40.0% | |
| TGACTGTTTGAGAGAGCTAA+CGG | - | chr5_3:57828708-57828727 | None:intergenic | 40.0% | |
| GCAAAAGATTAAGGCCTGTT+TGG | + | chr5_3:57828764-57828783 | Msa0820460:intron | 40.0% | |
| GCTTATTTGAGCTTACCTAC+CGG | - | chr5_3:57829000-57829019 | None:intergenic | 40.0% | |
| TTACTTGGACCTGTTTGGAT+TGG | - | chr5_3:57829022-57829041 | None:intergenic | 40.0% | |
| CAAGTTTACTTGGACCTGTT+TGG | - | chr5_3:57829027-57829046 | None:intergenic | 40.0% | |
| TTGTTTGTGACTGTGAAGGT+TGG | + | chr5_3:57829258-57829277 | Msa0820460:intron | 40.0% | |
| GCAAAGCCTTTCATTGAAGA+TGG | + | chr5_3:57829330-57829349 | Msa0820460:CDS | 40.0% | |
| TTATAGGAATGCATGCTCCT+TGG | + | chr5_3:57829380-57829399 | Msa0820460:CDS | 40.0% | |
| TGGACGCTGTAATTGCAATT+GGG | + | chr5_3:57829652-57829671 | Msa0820460:CDS | 40.0% | |
| TTGCAATTGGGACTGATGAT+AGG | + | chr5_3:57829664-57829683 | Msa0820460:CDS | 40.0% | |
| ACCATAATAGCTCACCAGTA+TGG | + | chr5_3:57829865-57829884 | Msa0820460:intron | 40.0% | |
| CTTCTGCAGGATCAAATTAG+AGG | + | chr5_3:57829975-57829994 | Msa0820460:intron | 40.0% | |
| AAATATGCTCGAGTGTGCTT+TGG | + | chr5_3:57830069-57830088 | Msa0820460:intron | 40.0% | |
| ! | TTGATGGCATGATAGAGATC+TGG | + | chr5_3:57830186-57830205 | Msa0820460:intron | 40.0% |
| CTTTCTGATTTCTGTTCCTG+CGG | + | chr5_3:57830224-57830243 | Msa0820460:intron | 40.0% | |
| GGTTTGACACTAAAACAGAC+CGG | - | chr5_3:57830307-57830326 | None:intergenic | 40.0% | |
| GGGAATGAAATGAATAGCAC+AGG | - | chr5_3:57830367-57830386 | None:intergenic | 40.0% | |
| TGTTGTTCCCTCCTCAATAA+AGG | + | chr5_3:57830600-57830619 | Msa0820460:intron | 40.0% | |
| CTAGGTAACCTTTATTGAGG+AGG | - | chr5_3:57830611-57830630 | None:intergenic | 40.0% | |
| TCATGGGTAGTGAGTGAAAT+GGG | - | chr5_3:57830946-57830965 | None:intergenic | 40.0% | |
| TTCATGGGTAGTGAGTGAAA+TGG | - | chr5_3:57830947-57830966 | None:intergenic | 40.0% | |
| CTCACTACCCATGAATAAGT+AGG | + | chr5_3:57830952-57830971 | Msa0820460:intron | 40.0% | |
| CACTACCCATGAATAAGTAG+GGG | + | chr5_3:57830954-57830973 | Msa0820460:intron | 40.0% | |
| TCCAACCCCTACTTATTCAT+GGG | - | chr5_3:57830962-57830981 | None:intergenic | 40.0% | |
| ATCCAACCCCTACTTATTCA+TGG | - | chr5_3:57830963-57830982 | None:intergenic | 40.0% | |
| ACATAGTCATCCATCCACAA+AGG | + | chr5_3:57831185-57831204 | Msa0820460:intron | 40.0% | |
| AAGGTCTCTTGGTCATTCTA+TGG | + | chr5_3:57831204-57831223 | Msa0820460:intron | 40.0% | |
| AGGTCTCTTGGTCATTCTAT+GGG | + | chr5_3:57831205-57831224 | Msa0820460:intron | 40.0% | |
| !! | CAAACAAATGGTGGGTCAAT+TGG | - | chr5_3:57831248-57831267 | None:intergenic | 40.0% |
| ! | TGTAATCATAGGTGTCGTGT+TGG | + | chr5_3:57831326-57831345 | Msa0820460:intron | 40.0% |
| ! | ATCACTAACTAGGTTGGACT+TGG | + | chr5_3:57831425-57831444 | Msa0820460:intron | 40.0% |
| ! | TCACTAACTAGGTTGGACTT+GGG | + | chr5_3:57831426-57831445 | Msa0820460:intron | 40.0% |
| ! | TGATTCAGGTTCTCTTCTAC+AGG | + | chr5_3:57831551-57831570 | Msa0820460:intron | 40.0% |
| ! | GATAGAGACATTTTCTGTGC+TGG | + | chr5_3:57832136-57832155 | Msa0820460:intron | 40.0% |
| TTCTGCATTGTTTGCACTCT+TGG | + | chr5_3:57832264-57832283 | Msa0820460:intron | 40.0% | |
| ATCTTCAATGGATGTCCATC+TGG | + | chr5_3:57832402-57832421 | Msa0820460:CDS | 40.0% | |
| AATTCAACTGTAGTTGCTGG+TGG | + | chr5_3:57832633-57832652 | Msa0820460:CDS | 40.0% | |
| GTTGTCAGATGGAAATAAGC+CGG | + | chr5_3:57832755-57832774 | Msa0820460:intron | 40.0% | |
| ! | TACCTCAAGAGCTTTTGCAT+AGG | - | chr5_3:57832836-57832855 | None:intergenic | 40.0% |
| TTGAAATTAAGGGACTGCAG+TGG | + | chr5_3:57832927-57832946 | Msa0820460:intron | 40.0% | |
| CAGTGGCTGTTTAACAAAAG+TGG | + | chr5_3:57832944-57832963 | Msa0820460:intron | 40.0% | |
| CAGTGGCTGTTTAACAAAAG+TGG | + | chr5_3:57832944-57832963 | Msa0820460:intron | 40.0% | |
| ! | GGTCTAAAGTTCGAACTAAC+AGG | + | chr5_3:57833081-57833100 | Msa0820460:intron | 40.0% |
| TTGCGGATCTGGGAAAATAT+TGG | - | chr5_3:57833323-57833342 | None:intergenic | 40.0% | |
| ATTGCATTATTGTGGGAGGA+AGG | + | chr5_3:57833364-57833383 | Msa0820460:intron | 40.0% | |
| TTGCATTATTGTGGGAGGAA+GGG | + | chr5_3:57833365-57833384 | Msa0820460:intron | 40.0% | |
| TTATGCTCATCGTGGATGAA+GGG | - | chr5_3:57833504-57833523 | None:intergenic | 40.0% | |
| TTTATGCTCATCGTGGATGA+AGG | - | chr5_3:57833505-57833524 | None:intergenic | 40.0% | |
| TTCGATGTTTATGCTCATCG+TGG | - | chr5_3:57833512-57833531 | None:intergenic | 40.0% | |
| TGTTATTGCAGGTTATTCCC+CGG | + | chr5_3:57833643-57833662 | Msa0820460:intron | 40.0% | |
| AGCATTGTCACATAATTGCC+GGG | - | chr5_3:57833664-57833683 | None:intergenic | 40.0% | |
| CAGCATTGTCACATAATTGC+CGG | - | chr5_3:57833665-57833684 | None:intergenic | 40.0% | |
| ATTTGGAGACGCTTAGAAGT+AGG | + | chr5_3:57833796-57833815 | Msa0820460:intron | 40.0% | |
| TTTGGAGACGCTTAGAAGTA+GGG | + | chr5_3:57833797-57833816 | Msa0820460:intron | 40.0% | |
| !! | GATCATTGGTGCTGTTCAAT+TGG | + | chr5_3:57833851-57833870 | Msa0820460:intron | 40.0% |
| TTTGCATGAACAGGAATAGC+TGG | + | chr5_3:57834212-57834231 | Msa0820460:intron | 40.0% | |
| !! | TATGGTTTGCTTCTGAGCAA+GGG | - | chr5_3:57834433-57834452 | None:intergenic | 40.0% |
| !! | ATATGGTTTGCTTCTGAGCA+AGG | - | chr5_3:57834434-57834453 | None:intergenic | 40.0% |
| AGCTAATGTCCTATGCACTT+TGG | + | chr5_3:57834513-57834532 | Msa0820460:intron | 40.0% | |
| TAATGTCCTATGCACTTTGG+TGG | + | chr5_3:57834516-57834535 | Msa0820460:intron | 40.0% | |
| TCAACGAGCATGTAAAAGCA+AGG | - | chr5_3:57834690-57834709 | None:intergenic | 40.0% | |
| ! | TGCTTTTACATGCTCGTTGA+AGG | + | chr5_3:57834690-57834709 | Msa0820460:intron | 40.0% |
| TGTGTTACCTTTACAACTGC+AGG | - | chr5_3:57834789-57834808 | None:intergenic | 40.0% | |
| TGCTATAAATGCTGCTACAG+AGG | + | chr5_3:57834890-57834909 | Msa0820460:CDS | 40.0% | |
| TTTCATCCACACTTAAGACC+AGG | - | chr5_3:57834923-57834942 | None:intergenic | 40.0% | |
| GACGGTCACATATTTACCTT+AGG | - | chr5_3:57834957-57834976 | None:intergenic | 40.0% | |
| GACTGCATGTGAATTTATGC+AGG | - | chr5_3:57835171-57835190 | None:intergenic | 40.0% | |
| CTAGACTCTATACTCAAACC+AGG | - | chr5_3:57835244-57835263 | None:intergenic | 40.0% | |
| CAATGATTAAGCGAGGAAAC+AGG | - | chr5_3:57835560-57835579 | None:intergenic | 40.0% | |
| TTCTTGGTACAGCTACTACA+TGG | - | chr5_3:57835606-57835625 | None:intergenic | 40.0% | |
| AGCTATCAATGCGAATTGCA+TGG | - | chr5_3:57835669-57835688 | None:intergenic | 40.0% | |
| ATCACATGTGTGCCTATTCT+AGG | + | chr5_3:57836092-57836111 | Msa0820460:intron | 40.0% | |
| TACCAGAAACATACATCCAG+TGG | - | chr5_3:57836366-57836385 | None:intergenic | 40.0% | |
| GAGCATCATCTGATCAAACT+AGG | + | chr5_3:57836459-57836478 | Msa0820460:three_prime_UTR | 40.0% | |
| !!! | ATGGTAGCGATTTTGAAGCA+TGG | + | chr5_3:57836487-57836506 | Msa0820460:three_prime_UTR | 40.0% |
| GCTTACCAGCATAGAAGACA+TGG | - | chr5_3:57827944-57827963 | None:intergenic | 45.0% | |
| AAGGTACAGACACGTCTCAA+GGG | + | chr5_3:57828073-57828092 | Msa0820460:CDS | 45.0% | |
| TCAACTAAGATCTTCGCAGC+GGG | - | chr5_3:57828264-57828283 | None:intergenic | 45.0% | |
| CAATGTCACAAAACGTAGGC+CGG | + | chr5_3:57828978-57828997 | Msa0820460:intron | 45.0% | |
| AGACTGTCTGAGAGAGCTTA+CGG | - | chr5_3:57829143-57829162 | None:intergenic | 45.0% | |
| AGAGCTAGCTGTTAGCATTG+AGG | + | chr5_3:57829524-57829543 | Msa0820460:CDS | 45.0% | |
| ! | GAGCTAGCTGTTAGCATTGA+GGG | + | chr5_3:57829525-57829544 | Msa0820460:CDS | 45.0% |
| GTGGACGCTGTAATTGCAAT+TGG | + | chr5_3:57829651-57829670 | Msa0820460:CDS | 45.0% | |
| GCCATACTGGTGAGCTATTA+TGG | - | chr5_3:57829869-57829888 | None:intergenic | 45.0% | |
| ATTGGAGAGCTTTGCCATAC+TGG | - | chr5_3:57829882-57829901 | None:intergenic | 45.0% | |
| GTGTTTGAGTGTACTTCTGC+AGG | + | chr5_3:57829962-57829981 | Msa0820460:intron | 45.0% | |
| TATCCACTGGAATAAACCGC+AGG | - | chr5_3:57830243-57830262 | None:intergenic | 45.0% | |
| GAGGGAACAACAACAAAGAC+TGG | - | chr5_3:57830592-57830611 | None:intergenic | 45.0% | |
| ACCCATGAATAAGTAGGGGT+TGG | + | chr5_3:57830958-57830977 | Msa0820460:intron | 45.0% | |
| ! | GGGGTTGGATTTTACACACA+CGG | + | chr5_3:57830973-57830992 | Msa0820460:intron | 45.0% |
| GACTATGTCTTGGCTCATGT+CGG | - | chr5_3:57831173-57831192 | None:intergenic | 45.0% | |
| GTGGATGGATGACTATGTCT+TGG | - | chr5_3:57831183-57831202 | None:intergenic | 45.0% | |
| ATCCATCCACAAAGGTCTCT+TGG | + | chr5_3:57831193-57831212 | Msa0820460:intron | 45.0% | |
| GAATGACCAAGAGACCTTTG+TGG | - | chr5_3:57831202-57831221 | None:intergenic | 45.0% | |
| GGTCTCTTGGTCATTCTATG+GGG | + | chr5_3:57831206-57831225 | Msa0820460:intron | 45.0% | |
| CGCGACTCATTTCTTGTCAA+TGG | + | chr5_3:57831591-57831610 | Msa0820460:CDS | 45.0% | |
| GAACAACTTTGGCACCACTT+TGG | - | chr5_3:57831932-57831951 | None:intergenic | 45.0% | |
| ! | TATTGGTGATCTGGCAACAC+AGG | + | chr5_3:57831965-57831984 | Msa0820460:intron | 45.0% |
| AAAAGAGTTGCTGCTGCAAC+TGG | + | chr5_3:57832181-57832200 | Msa0820460:CDS | 45.0% | |
| AAAGAGTTGCTGCTGCAACT+GGG | + | chr5_3:57832182-57832201 | Msa0820460:CDS | 45.0% | |
| CCACATGTAACAGACCTGAT+CGG | - | chr5_3:57832460-57832479 | None:intergenic | 45.0% | |
| TGGAAATAAGCCGGTACCTA+AGG | + | chr5_3:57832764-57832783 | Msa0820460:CDS | 45.0% | |
| CTCCTATGCAAAAGCTCTTG+AGG | + | chr5_3:57832831-57832850 | Msa0820460:CDS | 45.0% | |
| GCATTGTCACATAATTGCCG+GGG | - | chr5_3:57833663-57833682 | None:intergenic | 45.0% | |
| CGGCAATTATGTGACAATGC+TGG | + | chr5_3:57833663-57833682 | Msa0820460:CDS | 45.0% | |
| TTCTAAGCGTCTCCAAATGC+AGG | - | chr5_3:57833794-57833813 | None:intergenic | 45.0% | |
| TGGATACAAGTTCAAGCTGG+AGG | + | chr5_3:57833871-57833890 | Msa0820460:intron | 45.0% | |
| GATCAGTTCAGGTCTACAAC+AGG | - | chr5_3:57833919-57833938 | None:intergenic | 45.0% | |
| CAAGAGCTTGAGATCAGTTC+AGG | - | chr5_3:57833930-57833949 | None:intergenic | 45.0% | |
| GGAGTGAAACAATGGTCAAG+AGG | - | chr5_3:57834317-57834336 | None:intergenic | 45.0% | |
| TTGAAGCCACCAAAGTGCAT+AGG | - | chr5_3:57834525-57834544 | None:intergenic | 45.0% | |
| TTACATGCTCGTTGAAGGTG+AGG | + | chr5_3:57834695-57834714 | Msa0820460:intron | 45.0% | |
| TACATGCTCGTTGAAGGTGA+GGG | + | chr5_3:57834696-57834715 | Msa0820460:intron | 45.0% | |
| TGAATCAGCAATTCCACCAG+TGG | - | chr5_3:57834745-57834764 | None:intergenic | 45.0% | |
| AAATGGAATCCTGCTGAGGA+TGG | - | chr5_3:57835427-57835446 | None:intergenic | 45.0% | |
| ATTAAGCGAGGAAACAGGGA+GGG | - | chr5_3:57835555-57835574 | None:intergenic | 45.0% | |
| GCTGCTTCAATGATTAAGCG+AGG | - | chr5_3:57835567-57835586 | None:intergenic | 45.0% | |
| TGTAATATGCGCAATGCCAC+TGG | + | chr5_3:57836347-57836366 | Msa0820460:three_prime_UTR | 45.0% | |
| TGCCACTGGATGTATGTTTC+TGG | + | chr5_3:57836361-57836380 | Msa0820460:three_prime_UTR | 45.0% | |
| ! | ATGGTTGAAGACGGTGATGG+AGG | - | chr5_3:57827925-57827944 | None:intergenic | 50.0% |
| GACATGGTTGAAGACGGTGA+TGG | - | chr5_3:57827928-57827947 | None:intergenic | 50.0% | |
| ! | GAAGGTACAGACACGTCTCA+AGG | + | chr5_3:57828072-57828091 | Msa0820460:CDS | 50.0% |
| TAGGGTGGTTCGAACGACAT+CGG | - | chr5_3:57828142-57828161 | None:intergenic | 50.0% | |
| ATGAGTTTGTCCATACCGCG+AGG | - | chr5_3:57828168-57828187 | None:intergenic | 50.0% | |
| AGTAGCGCCGTCGTTAGAAA+TGG | - | chr5_3:57828214-57828233 | None:intergenic | 50.0% | |
| TGCTAAGTCTCAGGACTCTG+AGG | + | chr5_3:57828287-57828306 | Msa0820460:intron | 50.0% | |
| CTGAGAGAGCTTACGGAAAC+AGG | - | chr5_3:57829136-57829155 | None:intergenic | 50.0% | |
| TGCAAGCAATACCACAGTGG+TGG | - | chr5_3:57829292-57829311 | None:intergenic | 50.0% | |
| AGCTGCAAGCAATACCACAG+TGG | - | chr5_3:57829295-57829314 | None:intergenic | 50.0% | |
| GTTCCTGCGGTTTATTCCAG+TGG | + | chr5_3:57830237-57830256 | Msa0820460:intron | 50.0% | |
| GAATGTCCACTTTCGAGCAG+TGG | + | chr5_3:57830871-57830890 | Msa0820460:intron | 50.0% | |
| TATGTCTTGGCTCATGTCGG+TGG | - | chr5_3:57831170-57831189 | None:intergenic | 50.0% | |
| GACCAAGAGACCTTTGTGGA+TGG | - | chr5_3:57831198-57831217 | None:intergenic | 50.0% | |
| ! | CATAGGTGTCGTGTTGGTGT+CGG | + | chr5_3:57831332-57831351 | Msa0820460:intron | 50.0% |
| TATGAAGCACGGACACTCCT+CGG | - | chr5_3:57831394-57831413 | None:intergenic | 50.0% | |
| GGTTCTCTTCTACAGGTTCC+TGG | + | chr5_3:57831558-57831577 | Msa0820460:intron | 50.0% | |
| TCTCTTCTACAGGTTCCTGG+TGG | + | chr5_3:57831561-57831580 | Msa0820460:intron | 50.0% | |
| CAGGCGTGAGAGAACAACTT+TGG | - | chr5_3:57831943-57831962 | None:intergenic | 50.0% | |
| CAAAGTTGTTCTCTCACGCC+TGG | + | chr5_3:57831941-57831960 | Msa0820460:intron | 50.0% | |
| TTGCCAGATCACCAATAGCC+AGG | - | chr5_3:57831962-57831981 | None:intergenic | 50.0% | |
| AAGAGTTGCTGCTGCAACTG+GGG | + | chr5_3:57832183-57832202 | Msa0820460:CDS | 50.0% | |
| GGAGAACTATGGTGGCTGTT+TGG | - | chr5_3:57832428-57832447 | None:intergenic | 50.0% | |
| CCGATCAGGTCTGTTACATG+TGG | + | chr5_3:57832457-57832476 | Msa0820460:intron | 50.0% | |
| TCAACTGTAGTTGCTGGTGG+AGG | + | chr5_3:57832636-57832655 | Msa0820460:CDS | 50.0% | |
| ACGAAGGTCAACCAACCAGA+AGG | - | chr5_3:57833738-57833757 | None:intergenic | 50.0% | |
| CACAGGCACACATGAACTCA+AGG | - | chr5_3:57834578-57834597 | None:intergenic | 50.0% | |
| TTCATGTGTGCCTGTGTGTG+TGG | + | chr5_3:57834582-57834601 | Msa0820460:intron | 50.0% | |
| TCATGTGTGCCTGTGTGTGT+GGG | + | chr5_3:57834583-57834602 | Msa0820460:intron | 50.0% | |
| !! | AAGGTGAGGGTGCTCCATTT+GGG | + | chr5_3:57834709-57834728 | Msa0820460:intron | 50.0% |
| !! | AGCTTGCCTGGTCTTAAGTG+TGG | + | chr5_3:57834914-57834933 | Msa0820460:CDS | 50.0% |
| ATGGTGTTTCCATCCTCAGC+AGG | + | chr5_3:57835415-57835434 | Msa0820460:intron | 50.0% | |
| CTGGAAATGGAATCCTGCTG+AGG | - | chr5_3:57835431-57835450 | None:intergenic | 50.0% | |
| TTAAGCGAGGAAACAGGGAG+GGG | - | chr5_3:57835554-57835573 | None:intergenic | 50.0% | |
| GATTAAGCGAGGAAACAGGG+AGG | - | chr5_3:57835556-57835575 | None:intergenic | 50.0% | |
| ! | ATGTAGTCCGAGAGTGCACA+AGG | + | chr5_3:57836196-57836215 | Msa0820460:intron | 50.0% |
| ATCTACGCATTCCTCGTCCA+CGG | - | chr5_3:57836276-57836295 | None:intergenic | 50.0% | |
| !! | GTTGAAGACGGTGATGGAGG+AGG | - | chr5_3:57827922-57827941 | None:intergenic | 55.0% |
| GGTTCGAACGACATCGGCAA+CGG | - | chr5_3:57828136-57828155 | None:intergenic | 55.0% | |
| GATGTCGTTCGAACCACCCT+AGG | + | chr5_3:57828141-57828160 | Msa0820460:CDS | 55.0% | |
| GTCACAAAACGTAGGCCGGT+AGG | + | chr5_3:57828982-57829001 | Msa0820460:intron | 55.0% | |
| GTGACTGTGAAGGTTGGCGA+TGG | + | chr5_3:57829264-57829283 | Msa0820460:intron | 55.0% | |
| AATAGCACAGGCACAGCGAG+TGG | - | chr5_3:57830355-57830374 | None:intergenic | 55.0% | |
| GAGCAACCACTGCTCGAAAG+TGG | - | chr5_3:57830880-57830899 | None:intergenic | 55.0% | |
| ATGAAGCACGGACACAGACG+CGG | + | chr5_3:57831273-57831292 | Msa0820460:intron | 55.0% | |
| GTTCTCTCACGCCTGGCTAT+TGG | + | chr5_3:57831948-57831967 | Msa0820460:intron | 55.0% | |
| ! | ACGCCTGGCTATTGGTGATC+TGG | + | chr5_3:57831956-57831975 | Msa0820460:intron | 55.0% |
| AGAGTTGCTGCTGCAACTGG+GGG | + | chr5_3:57832184-57832203 | Msa0820460:CDS | 55.0% | |
| ATGGTGGCTGTTTGGCCAGA+TGG | - | chr5_3:57832420-57832439 | None:intergenic | 55.0% | |
| ACAGCCACCATAGTTCTCCG+TGG | + | chr5_3:57832429-57832448 | Msa0820460:CDS | 55.0% | |
| TCCACCACGGAGAACTATGG+TGG | - | chr5_3:57832436-57832455 | None:intergenic | 55.0% | |
| GTGCATGCTGCCTTAGGTAC+CGG | - | chr5_3:57832777-57832796 | None:intergenic | 55.0% | |
| TTGTGCGTGCATGCTGCCTT+AGG | - | chr5_3:57832783-57832802 | None:intergenic | 55.0% | |
| CAGCATGCACGCACAATAGC+TGG | + | chr5_3:57832787-57832806 | Msa0820460:CDS | 55.0% | |
| TTATTGTGGGAGGAAGGGCG+TGG | + | chr5_3:57833370-57833389 | Msa0820460:intron | 55.0% | |
| CAGAAACACGCGCTTCCTTC+TGG | + | chr5_3:57833720-57833739 | Msa0820460:CDS | 55.0% | |
| AACACGCGCTTCCTTCTGGT+TGG | + | chr5_3:57833724-57833743 | Msa0820460:intron | 55.0% | |
| GTTCAGGTCTACAACAGGCC+AGG | - | chr5_3:57833914-57833933 | None:intergenic | 55.0% | |
| TCAGGTACACCCACACACAC+AGG | - | chr5_3:57834595-57834614 | None:intergenic | 55.0% | |
| !! | GAAGGTGAGGGTGCTCCATT+TGG | + | chr5_3:57834708-57834727 | Msa0820460:intron | 55.0% |
| !! | AGGTGAGGGTGCTCCATTTG+GGG | + | chr5_3:57834710-57834729 | Msa0820460:intron | 55.0% |
| GTGGCTATGTCGACCCCAAA+TGG | - | chr5_3:57834726-57834745 | None:intergenic | 55.0% | |
| ! | TTTGGGGTCGACATAGCCAC+TGG | + | chr5_3:57834726-57834745 | Msa0820460:CDS | 55.0% |
| TGCAGGCTCCCAGACAAAGT+TGG | - | chr5_3:57834772-57834791 | None:intergenic | 55.0% | |
| CTGGGAGCCTGCAGTTGTAA+AGG | + | chr5_3:57834779-57834798 | Msa0820460:CDS | 55.0% | |
| AGCCTCTCCTTGTGCACTCT+CGG | - | chr5_3:57836206-57836225 | None:intergenic | 55.0% | |
| GTCCATACCGCGAGGACCTA+GGG | - | chr5_3:57828160-57828179 | None:intergenic | 60.0% | |
| TGTCCATACCGCGAGGACCT+AGG | - | chr5_3:57828161-57828180 | None:intergenic | 60.0% | |
| TGGCGATGGAACCACCACTG+TGG | + | chr5_3:57829278-57829297 | Msa0820460:intron | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr5_3:57831372-57831391 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr5_3:57831378-57831397 | None:intergenic | 60.0% |
| GCACGGACACTCCTCGGATT+AGG | - | chr5_3:57831388-57831407 | None:intergenic | 60.0% | |
| GAGTCGCGCATGTTACCACC+AGG | - | chr5_3:57831579-57831598 | None:intergenic | 60.0% | |
| GCCACCATAGTTCTCCGTGG+TGG | + | chr5_3:57832432-57832451 | Msa0820460:CDS | 60.0% | |
| GGCTCCACCACGGAGAACTA+TGG | - | chr5_3:57832439-57832458 | None:intergenic | 60.0% | |
| ! | AGACCTGATCGGCTCCACCA+CGG | - | chr5_3:57832449-57832468 | None:intergenic | 60.0% |
| CTCATCGTGGATGAAGGGCG+TGG | - | chr5_3:57833499-57833518 | None:intergenic | 60.0% | |
| TGCTACAGAGGCAGCTTGCC+TGG | + | chr5_3:57834902-57834921 | Msa0820460:CDS | 60.0% | |
| ! | GTCCGAGAGTGCACAAGGAG+AGG | + | chr5_3:57836201-57836220 | Msa0820460:intron | 60.0% |
| AGAGGCTGCTGCAAGTGCCA+TGG | + | chr5_3:57836219-57836238 | Msa0820460:CDS | 60.0% | |
| GAGGCTGCTGCAAGTGCCAT+GGG | + | chr5_3:57836220-57836239 | Msa0820460:CDS | 60.0% | |
| GCAAGTGCCATGGGAGGTAG+AGG | + | chr5_3:57836229-57836248 | Msa0820460:CDS | 60.0% | |
| CGAACCACCCTAGGTCCTCG+CGG | + | chr5_3:57828150-57828169 | Msa0820460:CDS | 65.0% | |
| CATACCGCGAGGACCTAGGG+TGG | - | chr5_3:57828157-57828176 | None:intergenic | 65.0% | |
| CACCCTAGGTCCTCGCGGTA+TGG | + | chr5_3:57828155-57828174 | Msa0820460:CDS | 65.0% | |
| CTCTGACGCGTGTCCGACAC+CGG | + | chr5_3:57831356-57831375 | Msa0820460:intron | 65.0% | |
| TCTGACGCGTGTCCGACACC+GGG | + | chr5_3:57831357-57831376 | Msa0820460:intron | 65.0% | |
| ACCGGGACACGCCTAATCCG+AGG | + | chr5_3:57831374-57831393 | Msa0820460:intron | 65.0% | |
| ! | TCTCCGTGGTGGAGCCGATC+AGG | + | chr5_3:57832443-57832462 | Msa0820460:CDS | 65.0% |
| GGGGTCGACATAGCCACTGG+TGG | + | chr5_3:57834729-57834748 | Msa0820460:CDS | 65.0% | |
| GCTGCTGCAAGTGCCATGGG+AGG | + | chr5_3:57836223-57836242 | Msa0820460:CDS | 65.0% | |
| GCCATGGGAGGTAGAGGTCG+CGG | + | chr5_3:57836235-57836254 | Msa0820460:CDS | 65.0% | |
| TCCGCGACCTCTACCTCCCA+TGG | - | chr5_3:57836239-57836258 | None:intergenic | 65.0% | |
| ATGGGAGGTAGAGGTCGCGG+AGG | + | chr5_3:57836238-57836257 | Msa0820460:CDS | 65.0% | |
| GCATTCCTCGTCCACGGCCA+CGG | - | chr5_3:57836270-57836289 | None:intergenic | 65.0% | |
| GGAGGTAGAGGTCGCGGAGG+TGG | + | chr5_3:57836241-57836260 | Msa0820460:CDS | 70.0% | |
| GGTCGCGGAGGTGGTTTCCG+TGG | + | chr5_3:57836250-57836269 | Msa0820460:CDS | 70.0% | |
| GGAGGTGGTTTCCGTGGCCG+TGG | + | chr5_3:57836256-57836275 | Msa0820460:CDS | 70.0% | |
| GGTTTCCGTGGCCGTGGACG+AGG | + | chr5_3:57836262-57836281 | Msa0820460:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 57827818 | 57836702 | 57827818 | ID=Msa0820460;Name=Msa0820460 |
| chr5_3 | mRNA | 57827818 | 57836702 | 57827818 | ID=Msa0820460-mRNA-1;Parent=Msa0820460;Name=Msa0820460-mRNA-1;_AED=0.12;_eAED=0.12;_QI=125|0.76|0.71|1|0.76|0.64|14|405|492 |
| chr5_3 | exon | 57827818 | 57827957 | 57827818 | ID=Msa0820460-mRNA-1:exon:17524;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57828048 | 57828292 | 57828048 | ID=Msa0820460-mRNA-1:exon:17525;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57828300 | 57828308 | 57828300 | ID=Msa0820460-mRNA-1:exon:17526;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57829326 | 57829401 | 57829326 | ID=Msa0820460-mRNA-1:exon:17527;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57829507 | 57829710 | 57829507 | ID=Msa0820460-mRNA-1:exon:17528;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57831573 | 57831742 | 57831573 | ID=Msa0820460-mRNA-1:exon:17529;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57832141 | 57832243 | 57832141 | ID=Msa0820460-mRNA-1:exon:17530;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57832345 | 57832464 | 57832345 | ID=Msa0820460-mRNA-1:exon:17531;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57832570 | 57832668 | 57832570 | ID=Msa0820460-mRNA-1:exon:17532;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57832763 | 57832852 | 57832763 | ID=Msa0820460-mRNA-1:exon:17533;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57833654 | 57833741 | 57833654 | ID=Msa0820460-mRNA-1:exon:17534;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57834712 | 57834800 | 57834712 | ID=Msa0820460-mRNA-1:exon:17535;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57834885 | 57834959 | 57834885 | ID=Msa0820460-mRNA-1:exon:17536;Parent=Msa0820460-mRNA-1 |
| chr5_3 | exon | 57836202 | 57836702 | 57836202 | ID=Msa0820460-mRNA-1:exon:17537;Parent=Msa0820460-mRNA-1 |
| chr5_3 | five_prime_UTR | 57827818 | 57827942 | 57827818 | ID=Msa0820460-mRNA-1:five_prime_utr;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57827943 | 57827957 | 57827943 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57828048 | 57828292 | 57828048 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57828300 | 57828308 | 57828300 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57829326 | 57829401 | 57829326 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57829507 | 57829710 | 57829507 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57831573 | 57831742 | 57831573 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57832141 | 57832243 | 57832141 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57832345 | 57832464 | 57832345 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57832570 | 57832668 | 57832570 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57832763 | 57832852 | 57832763 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57833654 | 57833741 | 57833654 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57834712 | 57834800 | 57834712 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57834885 | 57834959 | 57834885 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | CDS | 57836202 | 57836297 | 57836202 | ID=Msa0820460-mRNA-1:cds;Parent=Msa0820460-mRNA-1 |
| chr5_3 | three_prime_UTR | 57836298 | 57836702 | 57836298 | ID=Msa0820460-mRNA-1:three_prime_utr;Parent=Msa0820460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
