Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741590 | MCH86545.1 | 46.535 | 303 | 119 | 10 | 28 | 320 | 78 | 347 | 5.41e-60 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741590 | sp|Q9LZ03|TOP6A_ARATH | 37.727 | 220 | 113 | 6 | 124 | 320 | 209 | 427 | 1.37e-33 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741590 | A0A392MHH3 | 46.535 | 303 | 119 | 10 | 28 | 320 | 78 | 347 | 2.59e-60 | 206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0741590 | Msa0822670 | 0.966647 | 3.352516e-126 | -8.615850e-47 |
| Msa0741590 | Msa1414550 | 0.934413 | 4.196236e-96 | -8.615850e-47 |
| Msa0543980 | Msa0741590 | 0.802081 | 6.643985e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741590 | MtrunA17_Chr1g0181791 | 37.727 | 220 | 113 | 6 | 124 | 320 | 199 | 417 | 1.41e-34 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0741590 | AT5G02820.1 | 37.727 | 220 | 113 | 6 | 124 | 320 | 209 | 427 | 1.39e-34 | 130 |
Find 106 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAAACAAGTGGCATAAA+AGG | 0.205385 | 5_1:-61302482 | None:intergenic |
| TCCCAAAACTGCTGGGAAAA+TGG | 0.236911 | 5_1:+61302258 | Msa0741590:CDS |
| CACCGTTAAAGATGTGTTAA+AGG | 0.254468 | 5_1:+61302594 | Msa0741590:CDS |
| CGGTTAGGGTTTCGGACCTT+AGG | 0.268950 | 5_1:-61302099 | None:intergenic |
| GCGTCAAGAATTGCAAAATT+TGG | 0.285212 | 5_1:+61302645 | Msa0741590:CDS |
| GAGTTGCCCGGTTAGGGTTT+CGG | 0.311489 | 5_1:-61302107 | None:intergenic |
| GATTAGGCCAACGGATATTA+TGG | 0.315857 | 5_1:+61302522 | Msa0741590:CDS |
| ATCCTTTAACACATCTTTAA+CGG | 0.321170 | 5_1:-61302596 | None:intergenic |
| TTCTGAAGTTGTCACGGAAT+TGG | 0.335994 | 5_1:+61302315 | Msa0741590:CDS |
| CATACGATAGATTGTTCAAT+AGG | 0.340568 | 5_1:+61302220 | Msa0741590:CDS |
| GATATTATGGCTAAACATTC+TGG | 0.357289 | 5_1:+61302535 | Msa0741590:CDS |
| GGTTTCGGACCTTAGGGTTT+CGG | 0.360960 | 5_1:-61302092 | None:intergenic |
| AGGGAGGGAGTTGCCCGGTT+AGG | 0.361655 | 5_1:-61302114 | None:intergenic |
| TTCCTTGTCTTTCAACTCGA+TGG | 0.374825 | 5_1:-61302029 | None:intergenic |
| TCTTCCAGCTGCAGTTTCAT+TGG | 0.375651 | 5_1:-61302745 | None:intergenic |
| GGGAGGGAGTTGCCCGGTTA+GGG | 0.380413 | 5_1:-61302113 | None:intergenic |
| GACGATGTCGGCGATGGTAT+AGG | 0.381513 | 5_1:-61301945 | None:intergenic |
| ACGATGTCGGCGATGGTATA+GGG | 0.382732 | 5_1:-61301944 | None:intergenic |
| GTCAAGAATAAGCGAATGAT+TGG | 0.386602 | 5_1:+61302667 | Msa0741590:CDS |
| CCTTGTCCCACTCCGGGAAA+AGG | 0.387445 | 5_1:+61302134 | Msa0741590:CDS |
| TCCTTGTCTTTCAACTCGAT+GGG | 0.409020 | 5_1:-61302028 | None:intergenic |
| CTAAGGTCCGAAACCCTAAC+CGG | 0.410514 | 5_1:+61302100 | Msa0741590:CDS |
| CTCCCTCCCTTGTCCCACTC+CGG | 0.410541 | 5_1:+61302127 | Msa0741590:CDS |
| TTCCGTGACAACTTCAGAAT+CGG | 0.415114 | 5_1:-61302311 | None:intergenic |
| GAAATCGATGTTGGCCTTGT+CGG | 0.420658 | 5_1:-61301843 | None:intergenic |
| ATCGAGGCGCTGGCCTTGTG+CGG | 0.425954 | 5_1:+61302691 | Msa0741590:CDS |
| GATGGACAATGACATGTCTT+TGG | 0.429539 | 5_1:-61301897 | None:intergenic |
| ATGCTTATTCCCAAAACTGC+TGG | 0.429895 | 5_1:+61302250 | Msa0741590:CDS |
| TGGTATAGGGTGTCGTGCCT+AGG | 0.431601 | 5_1:-61301931 | None:intergenic |
| TCGAGGCGCTGGCCTTGTGC+GGG | 0.432528 | 5_1:+61302692 | Msa0741590:CDS |
| GGATGCACTCTTCATTCTCT+TGG | 0.433249 | 5_1:+61302285 | Msa0741590:CDS |
| TTTGAGAACTCGATCCTCTT+CGG | 0.437801 | 5_1:-61301990 | None:intergenic |
| TGAAACTGCAGCTGGAAGAT+TGG | 0.439610 | 5_1:+61302749 | Msa0741590:CDS |
| TCCTTGTATACGCTGGTGAA+TGG | 0.441337 | 5_1:+61302172 | Msa0741590:CDS |
| ATCTTCAAAGAGTGTGGATC+AGG | 0.443588 | 5_1:-61302454 | None:intergenic |
| GGTTAGGGTTTCGGACCTTA+GGG | 0.445994 | 5_1:-61302098 | None:intergenic |
| AATGATTGGCATCGAGGCGC+TGG | 0.454876 | 5_1:+61302681 | Msa0741590:CDS |
| AGGGTGTCGTGCCTAGGGTT+AGG | 0.455729 | 5_1:-61301925 | None:intergenic |
| ATGGCGATGATGTCGGAATC+GGG | 0.458714 | 5_1:-61302058 | None:intergenic |
| GATGGCGATGATGTCGGAAT+CGG | 0.462322 | 5_1:-61302059 | None:intergenic |
| GACAATGACATGTCTTTGGC+GGG | 0.463963 | 5_1:-61301893 | None:intergenic |
| ATGTCTTTGGCGGGGCGAAA+CGG | 0.465556 | 5_1:-61301884 | None:intergenic |
| CCTTGTATACGCTGGTGAAT+GGG | 0.466018 | 5_1:+61302173 | Msa0741590:CDS |
| TGCATTGTTGTCTCCGCGGA+GGG | 0.467661 | 5_1:+61302367 | Msa0741590:CDS |
| CCCATTCACCAGCGTATACA+AGG | 0.468089 | 5_1:-61302173 | None:intergenic |
| GGACAGAACAAGCCTAAAAC+AGG | 0.472087 | 5_1:-61302433 | None:intergenic |
| TTCGGAGGACTTGAAATTGT+AGG | 0.473232 | 5_1:-61301972 | None:intergenic |
| TACAAGGAGGTGAGAGGATG+AGG | 0.483339 | 5_1:-61302157 | None:intergenic |
| TCCCTCCCTTGTCCCACTCC+GGG | 0.487402 | 5_1:+61302128 | Msa0741590:CDS |
| TCCACACTCTTTGAAGATGT+TGG | 0.489309 | 5_1:+61302459 | Msa0741590:CDS |
| TGCTTATTCCCAAAACTGCT+GGG | 0.495886 | 5_1:+61302251 | Msa0741590:CDS |
| TCCGTGACAACTTCAGAATC+GGG | 0.521018 | 5_1:-61302310 | None:intergenic |
| GGTTTCGGACCTTCTGAGGA+TGG | 0.523443 | 5_1:-61302077 | None:intergenic |
| TTAGGGTTTCGGACCTTCTG+AGG | 0.525088 | 5_1:-61302081 | None:intergenic |
| TCCCGGAGTGGGACAAGGGA+GGG | 0.525832 | 5_1:-61302129 | None:intergenic |
| GTTGACATCCTTCGTAGTCA+TGG | 0.527480 | 5_1:-61302572 | None:intergenic |
| GCATGATTTATTGACGAGGA+TGG | 0.530653 | 5_1:+61302393 | Msa0741590:CDS |
| TGTTTAGCCATAATATCCGT+TGG | 0.534362 | 5_1:-61302529 | None:intergenic |
| GGAGTAATCGAAATCGATGT+TGG | 0.535752 | 5_1:-61301852 | None:intergenic |
| GGTATAGGGTGTCGTGCCTA+GGG | 0.537226 | 5_1:-61301930 | None:intergenic |
| GGACAAGGGAGGGAGTTGCC+CGG | 0.539727 | 5_1:-61302119 | None:intergenic |
| TTTGCCAATGAAACTGCAGC+TGG | 0.548133 | 5_1:+61302741 | Msa0741590:CDS |
| TCAACTCGATGGGGCAATCG+AGG | 0.552612 | 5_1:-61302018 | None:intergenic |
| CAACTCGATGGGGCAATCGA+GGG | 0.555444 | 5_1:-61302017 | None:intergenic |
| GCCTAGGGTTAGGTCATCGA+TGG | 0.562009 | 5_1:-61301915 | None:intergenic |
| GGACAATGACATGTCTTTGG+CGG | 0.562071 | 5_1:-61301894 | None:intergenic |
| ATTGTAGGTACGGACGATGT+CGG | 0.566546 | 5_1:-61301957 | None:intergenic |
| TCTGAGGATGGCGATGATGT+CGG | 0.567295 | 5_1:-61302065 | None:intergenic |
| GGGCTAAGATCGTATTTGAC+AGG | 0.567662 | 5_1:+61302712 | Msa0741590:CDS |
| TTCCCGGAGTGGGACAAGGG+AGG | 0.572087 | 5_1:-61302130 | None:intergenic |
| GCCAACATCTTCAAAGAGTG+TGG | 0.579804 | 5_1:-61302460 | None:intergenic |
| ATGTGAAGTATGTTGAGGGT+GGG | 0.580231 | 5_1:+61302197 | Msa0741590:CDS |
| GTGCATTGTTGTCTCCGCGG+AGG | 0.580543 | 5_1:+61302366 | Msa0741590:CDS |
| CCTTGTCTTTCAACTCGATG+GGG | 0.581073 | 5_1:-61302027 | None:intergenic |
| TCAGAAGGTCCGAAACCCTA+AGG | 0.581601 | 5_1:+61302083 | Msa0741590:CDS |
| GCCCGATTCTGAAGTTGTCA+CGG | 0.584874 | 5_1:+61302309 | Msa0741590:CDS |
| GGGAATGTGAAGTATGTTGA+GGG | 0.587975 | 5_1:+61302193 | Msa0741590:CDS |
| TCCTCGTCAATAAATCATGC+GGG | 0.591692 | 5_1:-61302390 | None:intergenic |
| CCCCATCGAGTTGAAAGACA+AGG | 0.592066 | 5_1:+61302027 | Msa0741590:CDS |
| AGGACTTGAAATTGTAGGTA+CGG | 0.596272 | 5_1:-61301967 | None:intergenic |
| AACTGCTGGGAAAATGGAGA+CGG | 0.599966 | 5_1:+61302264 | Msa0741590:CDS |
| ACATCATCGCCATCCTCAGA+AGG | 0.600402 | 5_1:+61302068 | Msa0741590:CDS |
| ATCCTCGTCAATAAATCATG+CGG | 0.604578 | 5_1:-61302391 | None:intergenic |
| TAGTCATGGAGAAGCTAAGA+CGG | 0.606739 | 5_1:-61302558 | None:intergenic |
| TAAGCGAATGATTGGCATCG+AGG | 0.609995 | 5_1:+61302675 | Msa0741590:CDS |
| GGTACGGACGATGTCGGCGA+TGG | 0.611616 | 5_1:-61301951 | None:intergenic |
| AATGTGAAGTATGTTGAGGG+TGG | 0.612589 | 5_1:+61302196 | Msa0741590:CDS |
| GTGGCTGGGGATTAGGCCAA+CGG | 0.613578 | 5_1:+61302513 | Msa0741590:CDS |
| CAATTTCAAGTCCTCCGAAG+AGG | 0.619873 | 5_1:+61301976 | Msa0741590:CDS |
| GAAGAGGATCGAGTTCTCAA+AGG | 0.629337 | 5_1:+61301992 | Msa0741590:CDS |
| ATACGATCTTAGCCCGCACA+AGG | 0.631726 | 5_1:-61302704 | None:intergenic |
| GGGGCGAAACGGACACTCGT+CGG | 0.633441 | 5_1:-61301873 | None:intergenic |
| TAAGGTCCGAAACCCTAACC+GGG | 0.636155 | 5_1:+61302101 | Msa0741590:CDS |
| AGCGTATACAAGGAGGTGAG+AGG | 0.640027 | 5_1:-61302163 | None:intergenic |
| AATCTTCGATTTCTCCGACA+AGG | 0.640474 | 5_1:+61301829 | Msa0741590:CDS |
| TCTCACCTCCTTGTATACGC+TGG | 0.641192 | 5_1:+61302165 | Msa0741590:CDS |
| GAGAACTCGATCCTCTTCGG+AGG | 0.643408 | 5_1:-61301987 | None:intergenic |
| TCCATCGATGACCTAACCCT+AGG | 0.644597 | 5_1:+61301914 | Msa0741590:CDS |
| TAAATCATGCGGGCCCTCCG+CGG | 0.662412 | 5_1:-61302380 | None:intergenic |
| ACAATGCACTGAAAGCGTTG+AGG | 0.669088 | 5_1:-61302352 | None:intergenic |
| GCCCGCATGATTTATTGACG+AGG | 0.673429 | 5_1:+61302389 | Msa0741590:CDS |
| ACAATGACATGTCTTTGGCG+GGG | 0.677367 | 5_1:-61301892 | None:intergenic |
| TGGGAATGTGAAGTATGTTG+AGG | 0.677521 | 5_1:+61302192 | Msa0741590:CDS |
| TAGCTTCTCCATGACTACGA+AGG | 0.687861 | 5_1:+61302564 | Msa0741590:CDS |
| TCAGTGCATTGTTGTCTCCG+CGG | 0.702717 | 5_1:+61302363 | Msa0741590:CDS |
| ATTCACCAGCGTATACAAGG+AGG | 0.740788 | 5_1:-61302170 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAAAATTTTTCAAACAAG+TGG | - | chr5_1:61302494-61302513 | None:intergenic | 20.0% |
| !!! | CTTGTTTGAAAAATTTTAAG+TGG | + | chr5_1:61302494-61302513 | Msa0741590:CDS | 20.0% |
| !!! | CTTAAAATTTTTCAAACAAG+TGG | - | chr5_1:61302494-61302513 | None:intergenic | 20.0% |
| !!! | CTTGTTTGAAAAATTTTAAG+TGG | + | chr5_1:61302494-61302513 | Msa0741590:CDS | 20.0% |
| !!! | TTTGAAAAATTTTAAGTGGC+TGG | + | chr5_1:61302498-61302517 | Msa0741590:CDS | 25.0% |
| !!! | TTGAAAAATTTTAAGTGGCT+GGG | + | chr5_1:61302499-61302518 | Msa0741590:CDS | 25.0% |
| ! | ATCCTTTAACACATCTTTAA+CGG | - | chr5_1:61302599-61302618 | None:intergenic | 25.0% |
| !!! | TTTGAAAAATTTTAAGTGGC+TGG | + | chr5_1:61302498-61302517 | Msa0741590:CDS | 25.0% |
| !!! | TTGAAAAATTTTAAGTGGCT+GGG | + | chr5_1:61302499-61302518 | Msa0741590:CDS | 25.0% |
| ! | ATCCTTTAACACATCTTTAA+CGG | - | chr5_1:61302599-61302618 | None:intergenic | 25.0% |
| CATACGATAGATTGTTCAAT+AGG | + | chr5_1:61302220-61302239 | Msa0741590:CDS | 30.0% | |
| TTTCAAACAAGTGGCATAAA+AGG | - | chr5_1:61302485-61302504 | None:intergenic | 30.0% | |
| !! | TGAAAAATTTTAAGTGGCTG+GGG | + | chr5_1:61302500-61302519 | Msa0741590:CDS | 30.0% |
| GATATTATGGCTAAACATTC+TGG | + | chr5_1:61302535-61302554 | Msa0741590:CDS | 30.0% | |
| ! | TTTTCAAAACTCGTCTAGAA+TGG | + | chr5_1:61302623-61302642 | Msa0741590:CDS | 30.0% |
| CATACGATAGATTGTTCAAT+AGG | + | chr5_1:61302220-61302239 | Msa0741590:CDS | 30.0% | |
| TTTCAAACAAGTGGCATAAA+AGG | - | chr5_1:61302485-61302504 | None:intergenic | 30.0% | |
| !! | TGAAAAATTTTAAGTGGCTG+GGG | + | chr5_1:61302500-61302519 | Msa0741590:CDS | 30.0% |
| GATATTATGGCTAAACATTC+TGG | + | chr5_1:61302535-61302554 | Msa0741590:CDS | 30.0% | |
| ! | TTTTCAAAACTCGTCTAGAA+TGG | + | chr5_1:61302623-61302642 | Msa0741590:CDS | 30.0% |
| !! | GAAATCGAAGATTTTGATGC+TGG | - | chr5_1:61301822-61301841 | None:intergenic | 35.0% |
| AGGACTTGAAATTGTAGGTA+CGG | - | chr5_1:61301970-61301989 | None:intergenic | 35.0% | |
| ATCCTCGTCAATAAATCATG+CGG | - | chr5_1:61302394-61302413 | None:intergenic | 35.0% | |
| ! | GAATTGAACTTGCCTGTTTT+AGG | + | chr5_1:61302421-61302440 | Msa0741590:CDS | 35.0% |
| TGTTTAGCCATAATATCCGT+TGG | - | chr5_1:61302532-61302551 | None:intergenic | 35.0% | |
| CACCGTTAAAGATGTGTTAA+AGG | + | chr5_1:61302594-61302613 | Msa0741590:CDS | 35.0% | |
| GCGTCAAGAATTGCAAAATT+TGG | + | chr5_1:61302645-61302664 | Msa0741590:CDS | 35.0% | |
| GTCAAGAATAAGCGAATGAT+TGG | + | chr5_1:61302667-61302686 | Msa0741590:CDS | 35.0% | |
| !! | GAAATCGAAGATTTTGATGC+TGG | - | chr5_1:61301822-61301841 | None:intergenic | 35.0% |
| AGGACTTGAAATTGTAGGTA+CGG | - | chr5_1:61301970-61301989 | None:intergenic | 35.0% | |
| ATCCTCGTCAATAAATCATG+CGG | - | chr5_1:61302394-61302413 | None:intergenic | 35.0% | |
| ! | GAATTGAACTTGCCTGTTTT+AGG | + | chr5_1:61302421-61302440 | Msa0741590:CDS | 35.0% |
| TGTTTAGCCATAATATCCGT+TGG | - | chr5_1:61302532-61302551 | None:intergenic | 35.0% | |
| CACCGTTAAAGATGTGTTAA+AGG | + | chr5_1:61302594-61302613 | Msa0741590:CDS | 35.0% | |
| GCGTCAAGAATTGCAAAATT+TGG | + | chr5_1:61302645-61302664 | Msa0741590:CDS | 35.0% | |
| GTCAAGAATAAGCGAATGAT+TGG | + | chr5_1:61302667-61302686 | Msa0741590:CDS | 35.0% | |
| AATCTTCGATTTCTCCGACA+AGG | + | chr5_1:61301829-61301848 | Msa0741590:CDS | 40.0% | |
| GGAGTAATCGAAATCGATGT+TGG | - | chr5_1:61301855-61301874 | None:intergenic | 40.0% | |
| GATGGACAATGACATGTCTT+TGG | - | chr5_1:61301900-61301919 | None:intergenic | 40.0% | |
| TTCGGAGGACTTGAAATTGT+AGG | - | chr5_1:61301975-61301994 | None:intergenic | 40.0% | |
| TTTGAGAACTCGATCCTCTT+CGG | - | chr5_1:61301993-61302012 | None:intergenic | 40.0% | |
| TCCTTGTCTTTCAACTCGAT+GGG | - | chr5_1:61302031-61302050 | None:intergenic | 40.0% | |
| TTCCTTGTCTTTCAACTCGA+TGG | - | chr5_1:61302032-61302051 | None:intergenic | 40.0% | |
| TGGGAATGTGAAGTATGTTG+AGG | + | chr5_1:61302192-61302211 | Msa0741590:CDS | 40.0% | |
| GGGAATGTGAAGTATGTTGA+GGG | + | chr5_1:61302193-61302212 | Msa0741590:CDS | 40.0% | |
| AATGTGAAGTATGTTGAGGG+TGG | + | chr5_1:61302196-61302215 | Msa0741590:CDS | 40.0% | |
| ATGTGAAGTATGTTGAGGGT+GGG | + | chr5_1:61302197-61302216 | Msa0741590:CDS | 40.0% | |
| ATGCTTATTCCCAAAACTGC+TGG | + | chr5_1:61302250-61302269 | Msa0741590:CDS | 40.0% | |
| TGCTTATTCCCAAAACTGCT+GGG | + | chr5_1:61302251-61302270 | Msa0741590:CDS | 40.0% | |
| ! | TCCATTTTCCCAGCAGTTTT+GGG | - | chr5_1:61302262-61302281 | None:intergenic | 40.0% |
| TTCCGTGACAACTTCAGAAT+CGG | - | chr5_1:61302314-61302333 | None:intergenic | 40.0% | |
| !! | TTCTGAAGTTGTCACGGAAT+TGG | + | chr5_1:61302315-61302334 | Msa0741590:CDS | 40.0% |
| TCCTCGTCAATAAATCATGC+GGG | - | chr5_1:61302393-61302412 | None:intergenic | 40.0% | |
| GCATGATTTATTGACGAGGA+TGG | + | chr5_1:61302393-61302412 | Msa0741590:CDS | 40.0% | |
| ! | ATCTTCAAAGAGTGTGGATC+AGG | - | chr5_1:61302457-61302476 | None:intergenic | 40.0% |
| ! | TCCACACTCTTTGAAGATGT+TGG | + | chr5_1:61302459-61302478 | Msa0741590:CDS | 40.0% |
| !! | ATTTTAAGTGGCTGGGGATT+AGG | + | chr5_1:61302506-61302525 | Msa0741590:CDS | 40.0% |
| GATTAGGCCAACGGATATTA+TGG | + | chr5_1:61302522-61302541 | Msa0741590:CDS | 40.0% | |
| TAGTCATGGAGAAGCTAAGA+CGG | - | chr5_1:61302561-61302580 | None:intergenic | 40.0% | |
| AATCTTCGATTTCTCCGACA+AGG | + | chr5_1:61301829-61301848 | Msa0741590:CDS | 40.0% | |
| GGAGTAATCGAAATCGATGT+TGG | - | chr5_1:61301855-61301874 | None:intergenic | 40.0% | |
| GATGGACAATGACATGTCTT+TGG | - | chr5_1:61301900-61301919 | None:intergenic | 40.0% | |
| TTCGGAGGACTTGAAATTGT+AGG | - | chr5_1:61301975-61301994 | None:intergenic | 40.0% | |
| TTTGAGAACTCGATCCTCTT+CGG | - | chr5_1:61301993-61302012 | None:intergenic | 40.0% | |
| TCCTTGTCTTTCAACTCGAT+GGG | - | chr5_1:61302031-61302050 | None:intergenic | 40.0% | |
| TTCCTTGTCTTTCAACTCGA+TGG | - | chr5_1:61302032-61302051 | None:intergenic | 40.0% | |
| TGGGAATGTGAAGTATGTTG+AGG | + | chr5_1:61302192-61302211 | Msa0741590:CDS | 40.0% | |
| GGGAATGTGAAGTATGTTGA+GGG | + | chr5_1:61302193-61302212 | Msa0741590:CDS | 40.0% | |
| AATGTGAAGTATGTTGAGGG+TGG | + | chr5_1:61302196-61302215 | Msa0741590:CDS | 40.0% | |
| ATGTGAAGTATGTTGAGGGT+GGG | + | chr5_1:61302197-61302216 | Msa0741590:CDS | 40.0% | |
| ATGCTTATTCCCAAAACTGC+TGG | + | chr5_1:61302250-61302269 | Msa0741590:CDS | 40.0% | |
| TGCTTATTCCCAAAACTGCT+GGG | + | chr5_1:61302251-61302270 | Msa0741590:CDS | 40.0% | |
| ! | TCCATTTTCCCAGCAGTTTT+GGG | - | chr5_1:61302262-61302281 | None:intergenic | 40.0% |
| TTCCGTGACAACTTCAGAAT+CGG | - | chr5_1:61302314-61302333 | None:intergenic | 40.0% | |
| !! | TTCTGAAGTTGTCACGGAAT+TGG | + | chr5_1:61302315-61302334 | Msa0741590:CDS | 40.0% |
| TCCTCGTCAATAAATCATGC+GGG | - | chr5_1:61302393-61302412 | None:intergenic | 40.0% | |
| GCATGATTTATTGACGAGGA+TGG | + | chr5_1:61302393-61302412 | Msa0741590:CDS | 40.0% | |
| ! | ATCTTCAAAGAGTGTGGATC+AGG | - | chr5_1:61302457-61302476 | None:intergenic | 40.0% |
| ! | TCCACACTCTTTGAAGATGT+TGG | + | chr5_1:61302459-61302478 | Msa0741590:CDS | 40.0% |
| !! | ATTTTAAGTGGCTGGGGATT+AGG | + | chr5_1:61302506-61302525 | Msa0741590:CDS | 40.0% |
| GATTAGGCCAACGGATATTA+TGG | + | chr5_1:61302522-61302541 | Msa0741590:CDS | 40.0% | |
| TAGTCATGGAGAAGCTAAGA+CGG | - | chr5_1:61302561-61302580 | None:intergenic | 40.0% | |
| !! | GAAATCGATGTTGGCCTTGT+CGG | - | chr5_1:61301846-61301865 | None:intergenic | 45.0% |
| ACAATGACATGTCTTTGGCG+GGG | - | chr5_1:61301895-61301914 | None:intergenic | 45.0% | |
| GACAATGACATGTCTTTGGC+GGG | - | chr5_1:61301896-61301915 | None:intergenic | 45.0% | |
| GGACAATGACATGTCTTTGG+CGG | - | chr5_1:61301897-61301916 | None:intergenic | 45.0% | |
| ATTGTAGGTACGGACGATGT+CGG | - | chr5_1:61301960-61301979 | None:intergenic | 45.0% | |
| ! | CAATTTCAAGTCCTCCGAAG+AGG | + | chr5_1:61301976-61301995 | Msa0741590:CDS | 45.0% |
| GAAGAGGATCGAGTTCTCAA+AGG | + | chr5_1:61301992-61302011 | Msa0741590:CDS | 45.0% | |
| CCTTGTCTTTCAACTCGATG+GGG | - | chr5_1:61302030-61302049 | None:intergenic | 45.0% | |
| ATTCACCAGCGTATACAAGG+AGG | - | chr5_1:61302173-61302192 | None:intergenic | 45.0% | |
| TCCTTGTATACGCTGGTGAA+TGG | + | chr5_1:61302172-61302191 | Msa0741590:CDS | 45.0% | |
| CCTTGTATACGCTGGTGAAT+GGG | + | chr5_1:61302173-61302192 | Msa0741590:CDS | 45.0% | |
| TCCCAAAACTGCTGGGAAAA+TGG | + | chr5_1:61302258-61302277 | Msa0741590:CDS | 45.0% | |
| ! | CTCCATTTTCCCAGCAGTTT+TGG | - | chr5_1:61302263-61302282 | None:intergenic | 45.0% |
| AACTGCTGGGAAAATGGAGA+CGG | + | chr5_1:61302264-61302283 | Msa0741590:CDS | 45.0% | |
| GGATGCACTCTTCATTCTCT+TGG | + | chr5_1:61302285-61302304 | Msa0741590:CDS | 45.0% | |
| TCCGTGACAACTTCAGAATC+GGG | - | chr5_1:61302313-61302332 | None:intergenic | 45.0% | |
| !! | ACAATGCACTGAAAGCGTTG+AGG | - | chr5_1:61302355-61302374 | None:intergenic | 45.0% |
| GGACAGAACAAGCCTAAAAC+AGG | - | chr5_1:61302436-61302455 | None:intergenic | 45.0% | |
| GCCAACATCTTCAAAGAGTG+TGG | - | chr5_1:61302463-61302482 | None:intergenic | 45.0% | |
| TAGCTTCTCCATGACTACGA+AGG | + | chr5_1:61302564-61302583 | Msa0741590:CDS | 45.0% | |
| GTTGACATCCTTCGTAGTCA+TGG | - | chr5_1:61302575-61302594 | None:intergenic | 45.0% | |
| TAAGCGAATGATTGGCATCG+AGG | + | chr5_1:61302675-61302694 | Msa0741590:CDS | 45.0% | |
| GGGCTAAGATCGTATTTGAC+AGG | + | chr5_1:61302712-61302731 | Msa0741590:CDS | 45.0% | |
| TTTGCCAATGAAACTGCAGC+TGG | + | chr5_1:61302741-61302760 | Msa0741590:CDS | 45.0% | |
| TCTTCCAGCTGCAGTTTCAT+TGG | - | chr5_1:61302748-61302767 | None:intergenic | 45.0% | |
| TGAAACTGCAGCTGGAAGAT+TGG | + | chr5_1:61302749-61302768 | Msa0741590:CDS | 45.0% | |
| !! | GAAATCGATGTTGGCCTTGT+CGG | - | chr5_1:61301846-61301865 | None:intergenic | 45.0% |
| ACAATGACATGTCTTTGGCG+GGG | - | chr5_1:61301895-61301914 | None:intergenic | 45.0% | |
| GACAATGACATGTCTTTGGC+GGG | - | chr5_1:61301896-61301915 | None:intergenic | 45.0% | |
| GGACAATGACATGTCTTTGG+CGG | - | chr5_1:61301897-61301916 | None:intergenic | 45.0% | |
| ATTGTAGGTACGGACGATGT+CGG | - | chr5_1:61301960-61301979 | None:intergenic | 45.0% | |
| ! | CAATTTCAAGTCCTCCGAAG+AGG | + | chr5_1:61301976-61301995 | Msa0741590:CDS | 45.0% |
| GAAGAGGATCGAGTTCTCAA+AGG | + | chr5_1:61301992-61302011 | Msa0741590:CDS | 45.0% | |
| CCTTGTCTTTCAACTCGATG+GGG | - | chr5_1:61302030-61302049 | None:intergenic | 45.0% | |
| ATTCACCAGCGTATACAAGG+AGG | - | chr5_1:61302173-61302192 | None:intergenic | 45.0% | |
| TCCTTGTATACGCTGGTGAA+TGG | + | chr5_1:61302172-61302191 | Msa0741590:CDS | 45.0% | |
| CCTTGTATACGCTGGTGAAT+GGG | + | chr5_1:61302173-61302192 | Msa0741590:CDS | 45.0% | |
| TCCCAAAACTGCTGGGAAAA+TGG | + | chr5_1:61302258-61302277 | Msa0741590:CDS | 45.0% | |
| ! | CTCCATTTTCCCAGCAGTTT+TGG | - | chr5_1:61302263-61302282 | None:intergenic | 45.0% |
| AACTGCTGGGAAAATGGAGA+CGG | + | chr5_1:61302264-61302283 | Msa0741590:CDS | 45.0% | |
| GGATGCACTCTTCATTCTCT+TGG | + | chr5_1:61302285-61302304 | Msa0741590:CDS | 45.0% | |
| TCCGTGACAACTTCAGAATC+GGG | - | chr5_1:61302313-61302332 | None:intergenic | 45.0% | |
| !! | ACAATGCACTGAAAGCGTTG+AGG | - | chr5_1:61302355-61302374 | None:intergenic | 45.0% |
| GGACAGAACAAGCCTAAAAC+AGG | - | chr5_1:61302436-61302455 | None:intergenic | 45.0% | |
| GCCAACATCTTCAAAGAGTG+TGG | - | chr5_1:61302463-61302482 | None:intergenic | 45.0% | |
| TAGCTTCTCCATGACTACGA+AGG | + | chr5_1:61302564-61302583 | Msa0741590:CDS | 45.0% | |
| GTTGACATCCTTCGTAGTCA+TGG | - | chr5_1:61302575-61302594 | None:intergenic | 45.0% | |
| TAAGCGAATGATTGGCATCG+AGG | + | chr5_1:61302675-61302694 | Msa0741590:CDS | 45.0% | |
| GGGCTAAGATCGTATTTGAC+AGG | + | chr5_1:61302712-61302731 | Msa0741590:CDS | 45.0% | |
| TTTGCCAATGAAACTGCAGC+TGG | + | chr5_1:61302741-61302760 | Msa0741590:CDS | 45.0% | |
| TCTTCCAGCTGCAGTTTCAT+TGG | - | chr5_1:61302748-61302767 | None:intergenic | 45.0% | |
| TGAAACTGCAGCTGGAAGAT+TGG | + | chr5_1:61302749-61302768 | Msa0741590:CDS | 45.0% | |
| TCCATCGATGACCTAACCCT+AGG | + | chr5_1:61301914-61301933 | Msa0741590:CDS | 50.0% | |
| ACGATGTCGGCGATGGTATA+GGG | - | chr5_1:61301947-61301966 | None:intergenic | 50.0% | |
| !! | CCCCATCGAGTTGAAAGACA+AGG | + | chr5_1:61302027-61302046 | Msa0741590:CDS | 50.0% |
| ATGGCGATGATGTCGGAATC+GGG | - | chr5_1:61302061-61302080 | None:intergenic | 50.0% | |
| GATGGCGATGATGTCGGAAT+CGG | - | chr5_1:61302062-61302081 | None:intergenic | 50.0% | |
| TCTGAGGATGGCGATGATGT+CGG | - | chr5_1:61302068-61302087 | None:intergenic | 50.0% | |
| ACATCATCGCCATCCTCAGA+AGG | + | chr5_1:61302068-61302087 | Msa0741590:CDS | 50.0% | |
| TTAGGGTTTCGGACCTTCTG+AGG | - | chr5_1:61302084-61302103 | None:intergenic | 50.0% | |
| TCAGAAGGTCCGAAACCCTA+AGG | + | chr5_1:61302083-61302102 | Msa0741590:CDS | 50.0% | |
| GGTTTCGGACCTTAGGGTTT+CGG | - | chr5_1:61302095-61302114 | None:intergenic | 50.0% | |
| GGTTAGGGTTTCGGACCTTA+GGG | - | chr5_1:61302101-61302120 | None:intergenic | 50.0% | |
| CTAAGGTCCGAAACCCTAAC+CGG | + | chr5_1:61302100-61302119 | Msa0741590:CDS | 50.0% | |
| TAAGGTCCGAAACCCTAACC+GGG | + | chr5_1:61302101-61302120 | Msa0741590:CDS | 50.0% | |
| TACAAGGAGGTGAGAGGATG+AGG | - | chr5_1:61302160-61302179 | None:intergenic | 50.0% | |
| AGCGTATACAAGGAGGTGAG+AGG | - | chr5_1:61302166-61302185 | None:intergenic | 50.0% | |
| TCTCACCTCCTTGTATACGC+TGG | + | chr5_1:61302165-61302184 | Msa0741590:CDS | 50.0% | |
| CCCATTCACCAGCGTATACA+AGG | - | chr5_1:61302176-61302195 | None:intergenic | 50.0% | |
| !! | GCCCGATTCTGAAGTTGTCA+CGG | + | chr5_1:61302309-61302328 | Msa0741590:CDS | 50.0% |
| TCAGTGCATTGTTGTCTCCG+CGG | + | chr5_1:61302363-61302382 | Msa0741590:CDS | 50.0% | |
| GCCCGCATGATTTATTGACG+AGG | + | chr5_1:61302389-61302408 | Msa0741590:CDS | 50.0% | |
| ATACGATCTTAGCCCGCACA+AGG | - | chr5_1:61302707-61302726 | None:intergenic | 50.0% | |
| TCCATCGATGACCTAACCCT+AGG | + | chr5_1:61301914-61301933 | Msa0741590:CDS | 50.0% | |
| ACGATGTCGGCGATGGTATA+GGG | - | chr5_1:61301947-61301966 | None:intergenic | 50.0% | |
| !! | CCCCATCGAGTTGAAAGACA+AGG | + | chr5_1:61302027-61302046 | Msa0741590:CDS | 50.0% |
| ATGGCGATGATGTCGGAATC+GGG | - | chr5_1:61302061-61302080 | None:intergenic | 50.0% | |
| GATGGCGATGATGTCGGAAT+CGG | - | chr5_1:61302062-61302081 | None:intergenic | 50.0% | |
| TCTGAGGATGGCGATGATGT+CGG | - | chr5_1:61302068-61302087 | None:intergenic | 50.0% | |
| ACATCATCGCCATCCTCAGA+AGG | + | chr5_1:61302068-61302087 | Msa0741590:CDS | 50.0% | |
| TTAGGGTTTCGGACCTTCTG+AGG | - | chr5_1:61302084-61302103 | None:intergenic | 50.0% | |
| TCAGAAGGTCCGAAACCCTA+AGG | + | chr5_1:61302083-61302102 | Msa0741590:CDS | 50.0% | |
| GGTTTCGGACCTTAGGGTTT+CGG | - | chr5_1:61302095-61302114 | None:intergenic | 50.0% | |
| GGTTAGGGTTTCGGACCTTA+GGG | - | chr5_1:61302101-61302120 | None:intergenic | 50.0% | |
| CTAAGGTCCGAAACCCTAAC+CGG | + | chr5_1:61302100-61302119 | Msa0741590:CDS | 50.0% | |
| TAAGGTCCGAAACCCTAACC+GGG | + | chr5_1:61302101-61302120 | Msa0741590:CDS | 50.0% | |
| TACAAGGAGGTGAGAGGATG+AGG | - | chr5_1:61302160-61302179 | None:intergenic | 50.0% | |
| AGCGTATACAAGGAGGTGAG+AGG | - | chr5_1:61302166-61302185 | None:intergenic | 50.0% | |
| TCTCACCTCCTTGTATACGC+TGG | + | chr5_1:61302165-61302184 | Msa0741590:CDS | 50.0% | |
| CCCATTCACCAGCGTATACA+AGG | - | chr5_1:61302176-61302195 | None:intergenic | 50.0% | |
| !! | GCCCGATTCTGAAGTTGTCA+CGG | + | chr5_1:61302309-61302328 | Msa0741590:CDS | 50.0% |
| TCAGTGCATTGTTGTCTCCG+CGG | + | chr5_1:61302363-61302382 | Msa0741590:CDS | 50.0% | |
| GCCCGCATGATTTATTGACG+AGG | + | chr5_1:61302389-61302408 | Msa0741590:CDS | 50.0% | |
| ATACGATCTTAGCCCGCACA+AGG | - | chr5_1:61302707-61302726 | None:intergenic | 50.0% | |
| ATGTCTTTGGCGGGGCGAAA+CGG | - | chr5_1:61301887-61301906 | None:intergenic | 55.0% | |
| GCCTAGGGTTAGGTCATCGA+TGG | - | chr5_1:61301918-61301937 | None:intergenic | 55.0% | |
| !! | GGTATAGGGTGTCGTGCCTA+GGG | - | chr5_1:61301933-61301952 | None:intergenic | 55.0% |
| !! | TGGTATAGGGTGTCGTGCCT+AGG | - | chr5_1:61301934-61301953 | None:intergenic | 55.0% |
| GACGATGTCGGCGATGGTAT+AGG | - | chr5_1:61301948-61301967 | None:intergenic | 55.0% | |
| GAGAACTCGATCCTCTTCGG+AGG | - | chr5_1:61301990-61302009 | None:intergenic | 55.0% | |
| CAACTCGATGGGGCAATCGA+GGG | - | chr5_1:61302020-61302039 | None:intergenic | 55.0% | |
| TCAACTCGATGGGGCAATCG+AGG | - | chr5_1:61302021-61302040 | None:intergenic | 55.0% | |
| ! | GGTTTCGGACCTTCTGAGGA+TGG | - | chr5_1:61302080-61302099 | None:intergenic | 55.0% |
| CGGTTAGGGTTTCGGACCTT+AGG | - | chr5_1:61302102-61302121 | None:intergenic | 55.0% | |
| GAGTTGCCCGGTTAGGGTTT+CGG | - | chr5_1:61302110-61302129 | None:intergenic | 55.0% | |
| ! | CTTTTCCCGGAGTGGGACAA+GGG | - | chr5_1:61302136-61302155 | None:intergenic | 55.0% |
| ! | ATGAGGCCTTTTCCCGGAGT+GGG | - | chr5_1:61302143-61302162 | None:intergenic | 55.0% |
| ! | GAGAGGATGAGGCCTTTTCC+CGG | - | chr5_1:61302149-61302168 | None:intergenic | 55.0% |
| TGCATTGTTGTCTCCGCGGA+GGG | + | chr5_1:61302367-61302386 | Msa0741590:CDS | 55.0% | |
| ! | AATGATTGGCATCGAGGCGC+TGG | + | chr5_1:61302681-61302700 | Msa0741590:CDS | 55.0% |
| ATGTCTTTGGCGGGGCGAAA+CGG | - | chr5_1:61301887-61301906 | None:intergenic | 55.0% | |
| GCCTAGGGTTAGGTCATCGA+TGG | - | chr5_1:61301918-61301937 | None:intergenic | 55.0% | |
| !! | GGTATAGGGTGTCGTGCCTA+GGG | - | chr5_1:61301933-61301952 | None:intergenic | 55.0% |
| !! | TGGTATAGGGTGTCGTGCCT+AGG | - | chr5_1:61301934-61301953 | None:intergenic | 55.0% |
| GACGATGTCGGCGATGGTAT+AGG | - | chr5_1:61301948-61301967 | None:intergenic | 55.0% | |
| GAGAACTCGATCCTCTTCGG+AGG | - | chr5_1:61301990-61302009 | None:intergenic | 55.0% | |
| CAACTCGATGGGGCAATCGA+GGG | - | chr5_1:61302020-61302039 | None:intergenic | 55.0% | |
| TCAACTCGATGGGGCAATCG+AGG | - | chr5_1:61302021-61302040 | None:intergenic | 55.0% | |
| ! | GGTTTCGGACCTTCTGAGGA+TGG | - | chr5_1:61302080-61302099 | None:intergenic | 55.0% |
| CGGTTAGGGTTTCGGACCTT+AGG | - | chr5_1:61302102-61302121 | None:intergenic | 55.0% | |
| GAGTTGCCCGGTTAGGGTTT+CGG | - | chr5_1:61302110-61302129 | None:intergenic | 55.0% | |
| ! | CTTTTCCCGGAGTGGGACAA+GGG | - | chr5_1:61302136-61302155 | None:intergenic | 55.0% |
| ! | ATGAGGCCTTTTCCCGGAGT+GGG | - | chr5_1:61302143-61302162 | None:intergenic | 55.0% |
| ! | GAGAGGATGAGGCCTTTTCC+CGG | - | chr5_1:61302149-61302168 | None:intergenic | 55.0% |
| TGCATTGTTGTCTCCGCGGA+GGG | + | chr5_1:61302367-61302386 | Msa0741590:CDS | 55.0% | |
| ! | AATGATTGGCATCGAGGCGC+TGG | + | chr5_1:61302681-61302700 | Msa0741590:CDS | 55.0% |
| !! | AGGGTGTCGTGCCTAGGGTT+AGG | - | chr5_1:61301928-61301947 | None:intergenic | 60.0% |
| ! | CCTTTTCCCGGAGTGGGACA+AGG | - | chr5_1:61302137-61302156 | None:intergenic | 60.0% |
| CCTTGTCCCACTCCGGGAAA+AGG | + | chr5_1:61302134-61302153 | Msa0741590:CDS | 60.0% | |
| ! | GATGAGGCCTTTTCCCGGAG+TGG | - | chr5_1:61302144-61302163 | None:intergenic | 60.0% |
| GTGCATTGTTGTCTCCGCGG+AGG | + | chr5_1:61302366-61302385 | Msa0741590:CDS | 60.0% | |
| TAAATCATGCGGGCCCTCCG+CGG | - | chr5_1:61302383-61302402 | None:intergenic | 60.0% | |
| GTGGCTGGGGATTAGGCCAA+CGG | + | chr5_1:61302513-61302532 | Msa0741590:CDS | 60.0% | |
| !! | AGGGTGTCGTGCCTAGGGTT+AGG | - | chr5_1:61301928-61301947 | None:intergenic | 60.0% |
| ! | CCTTTTCCCGGAGTGGGACA+AGG | - | chr5_1:61302137-61302156 | None:intergenic | 60.0% |
| CCTTGTCCCACTCCGGGAAA+AGG | + | chr5_1:61302134-61302153 | Msa0741590:CDS | 60.0% | |
| ! | GATGAGGCCTTTTCCCGGAG+TGG | - | chr5_1:61302144-61302163 | None:intergenic | 60.0% |
| GTGCATTGTTGTCTCCGCGG+AGG | + | chr5_1:61302366-61302385 | Msa0741590:CDS | 60.0% | |
| TAAATCATGCGGGCCCTCCG+CGG | - | chr5_1:61302383-61302402 | None:intergenic | 60.0% | |
| GTGGCTGGGGATTAGGCCAA+CGG | + | chr5_1:61302513-61302532 | Msa0741590:CDS | 60.0% | |
| GGGGCGAAACGGACACTCGT+CGG | - | chr5_1:61301876-61301895 | None:intergenic | 65.0% | |
| GGTACGGACGATGTCGGCGA+TGG | - | chr5_1:61301954-61301973 | None:intergenic | 65.0% | |
| GGGAGGGAGTTGCCCGGTTA+GGG | - | chr5_1:61302116-61302135 | None:intergenic | 65.0% | |
| AGGGAGGGAGTTGCCCGGTT+AGG | - | chr5_1:61302117-61302136 | None:intergenic | 65.0% | |
| GGACAAGGGAGGGAGTTGCC+CGG | - | chr5_1:61302122-61302141 | None:intergenic | 65.0% | |
| CTCCCTCCCTTGTCCCACTC+CGG | + | chr5_1:61302127-61302146 | Msa0741590:CDS | 65.0% | |
| TCCCTCCCTTGTCCCACTCC+GGG | + | chr5_1:61302128-61302147 | Msa0741590:CDS | 65.0% | |
| TCCCGGAGTGGGACAAGGGA+GGG | - | chr5_1:61302132-61302151 | None:intergenic | 65.0% | |
| TTCCCGGAGTGGGACAAGGG+AGG | - | chr5_1:61302133-61302152 | None:intergenic | 65.0% | |
| !! | ATCGAGGCGCTGGCCTTGTG+CGG | + | chr5_1:61302691-61302710 | Msa0741590:CDS | 65.0% |
| GGGGCGAAACGGACACTCGT+CGG | - | chr5_1:61301876-61301895 | None:intergenic | 65.0% | |
| GGTACGGACGATGTCGGCGA+TGG | - | chr5_1:61301954-61301973 | None:intergenic | 65.0% | |
| GGGAGGGAGTTGCCCGGTTA+GGG | - | chr5_1:61302116-61302135 | None:intergenic | 65.0% | |
| AGGGAGGGAGTTGCCCGGTT+AGG | - | chr5_1:61302117-61302136 | None:intergenic | 65.0% | |
| GGACAAGGGAGGGAGTTGCC+CGG | - | chr5_1:61302122-61302141 | None:intergenic | 65.0% | |
| CTCCCTCCCTTGTCCCACTC+CGG | + | chr5_1:61302127-61302146 | Msa0741590:CDS | 65.0% | |
| TCCCTCCCTTGTCCCACTCC+GGG | + | chr5_1:61302128-61302147 | Msa0741590:CDS | 65.0% | |
| TCCCGGAGTGGGACAAGGGA+GGG | - | chr5_1:61302132-61302151 | None:intergenic | 65.0% | |
| TTCCCGGAGTGGGACAAGGG+AGG | - | chr5_1:61302133-61302152 | None:intergenic | 65.0% | |
| !! | ATCGAGGCGCTGGCCTTGTG+CGG | + | chr5_1:61302691-61302710 | Msa0741590:CDS | 65.0% |
| !! | TCGAGGCGCTGGCCTTGTGC+GGG | + | chr5_1:61302692-61302711 | Msa0741590:CDS | 70.0% |
| !! | TCGAGGCGCTGGCCTTGTGC+GGG | + | chr5_1:61302692-61302711 | Msa0741590:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 61301815 | 61302777 | 61301815 | ID=Msa0741590;Name=Msa0741590 |
| chr5_1 | mRNA | 61301815 | 61302777 | 61301815 | ID=Msa0741590-mRNA-1;Parent=Msa0741590;Name=Msa0741590-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|320 |
| chr5_1 | exon | 61301815 | 61302777 | 61301815 | ID=Msa0741590-mRNA-1:exon:17742;Parent=Msa0741590-mRNA-1 |
| chr5_1 | CDS | 61301815 | 61302777 | 61301815 | ID=Msa0741590-mRNA-1:cds;Parent=Msa0741590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
