AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0741950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0741950 MtrunA17_Chr5g0443411 88.430 605 28 5 1 583 1 585 0.0 661
Msa0741950 MtrunA17_Chr3g0096661 58.696 184 51 2 399 582 171 329 2.71e-53 184
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 295 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGGGGTTGGATCACAATT+TGG 0.173921 5_1:-61741938 None:intergenic
GATGGTGTTGTTGGGGTTAT+AGG 0.187860 5_1:-61742655 None:intergenic
GATGGTGTTGTTGGGGTTAT+AGG 0.187860 5_1:-61742850 None:intergenic
GATGGTGTTGTTGGGGTTAA+AGG 0.206619 5_1:-61742877 None:intergenic
GATGGTGTTGTCGGGGTTAT+AGG 0.215929 5_1:-61742529 None:intergenic
GATGGTGTTGTAGGGGTTAT+AGG 0.231476 5_1:-61742721 None:intergenic
GATGGTGTTGTTGGGGTTAA+AGG 0.234509 5_1:-61742784 None:intergenic
GAGGGTTTGATGGTGTTGTT+GGG 0.242841 5_1:-61742663 None:intergenic
GAGGGTTTGATGGTGTTGTT+GGG 0.242841 5_1:-61742885 None:intergenic
GAGGGTGTTGTCGGGCTTGT+AGG 0.246588 5_1:-61742352 None:intergenic
GGTGATGGGGTAGGAGTTGA+TGG 0.253366 5_1:-61741869 None:intergenic
GATGGTGTTGTTGGAGTTAT+AGG 0.265548 5_1:-61742592 None:intergenic
GCTTGAGTGTTGGCCATTAC+AGG 0.266931 5_1:-61741329 None:intergenic
GGAGGGTTTGATGGTGTTGT+TGG 0.269445 5_1:-61742664 None:intergenic
GGAGGGTTTGATGGTGTTGT+TGG 0.269445 5_1:-61742886 None:intergenic
ATGGGGTTGGATCACAATTT+GGG 0.282770 5_1:-61741937 None:intergenic
GGTGACGGGGTTGGAGTTGA+TGG 0.284582 5_1:-61742049 None:intergenic
GGGAGGATTTGGAGGTGGTT+TGG 0.284865 5_1:-61741199 None:intergenic
GGAGGGTTTGATGGTGTTGT+AGG 0.287554 5_1:-61742730 None:intergenic
GTGGGTTTGATGGTGTTGTC+GGG 0.287699 5_1:-61742537 None:intergenic
AAGGGTTTGATGGTGTTGTT+GGG 0.291609 5_1:-61742858 None:intergenic
AGAAAAGGAAAGGGAGGATT+TGG 0.297468 5_1:-61741210 None:intergenic
CCTCCTGATGGTGGGTTTGA+TGG 0.298529 5_1:-61742547 None:intergenic
GGAGGGTTTGATGGTGTTGA+TGG 0.299765 5_1:-61742385 None:intergenic
GTTGATGGTGTTGGGCTTGA+GGG 0.307396 5_1:-61742370 None:intergenic
ATGGTGTTGTTGGGGTTATA+GGG 0.309013 5_1:-61742654 None:intergenic
ATGGTGTTGTTGGGGTTATA+GGG 0.309013 5_1:-61742849 None:intergenic
GGTGATGGGGTGGGAGTTGA+CGG 0.310361 5_1:-61741992 None:intergenic
GAGGATTTGATGGTGTTGTT+GGG 0.311465 5_1:-61742792 None:intergenic
CCTCCTGTCGGAGGGTTTGA+TGG 0.313124 5_1:-61742739 None:intergenic
AAAGGGTTTGATGGTGTTGT+TGG 0.314241 5_1:-61742859 None:intergenic
ATGGTGTTGTTGGGGTTAAA+GGG 0.314440 5_1:-61742783 None:intergenic
ATGGTGTTGTTGGGGTTAAA+GGG 0.314440 5_1:-61742876 None:intergenic
GTTGGGGTTAAAGGGTTTGA+TGG 0.314789 5_1:-61742868 None:intergenic
CCTCCTGATGGAGGGTTTGA+TGG 0.330128 5_1:-61742673 None:intergenic
CCTCCTGATGGAGGGTTTGA+TGG 0.330128 5_1:-61742895 None:intergenic
TTGATGGTGTTGATGGTGTT+GGG 0.332355 5_1:-61742378 None:intergenic
CCTCCTGATGGAGGGTTTGA+TGG 0.333779 5_1:-61742610 None:intergenic
GGTGGGTTTGATGGTGTTGT+CGG 0.337336 5_1:-61742538 None:intergenic
TCTCCTGAGGGAGGGTTTGA+TGG 0.338126 5_1:-61742394 None:intergenic
CAACTCATCTGGGGATTACT+AGG 0.339213 5_1:+61743418 Msa0741950:CDS
AGGGTGGACAGTCGCTAGTT+GGG 0.342384 5_1:-61742324 None:intergenic
GGAGGATTTGATGGTGTTGT+TGG 0.347029 5_1:-61742793 None:intergenic
AGCATCACTCAGCTCAAATA+AGG 0.347612 5_1:+61743642 Msa0741950:CDS
GGTGATGGGGTAGGAGTTGA+CGG 0.353452 5_1:-61742103 None:intergenic
TTTGATGGTGTTGATGGTGT+TGG 0.355335 5_1:-61742379 None:intergenic
CCACCTCCTGGAGGAGTTGA+TGG 0.356567 5_1:-61742196 None:intergenic
GTTGGGCTTGAGGGTGTTGT+CGG 0.357827 5_1:-61742361 None:intergenic
CATCGCCTGAGGGTGGTGTT+GGG 0.358547 5_1:-61742234 None:intergenic
GAGGGTGTTGTTGGGCTTGT+AGG 0.360889 5_1:-61742448 None:intergenic
CCTTGTTATTGTTCCTGTAA+TGG 0.362368 5_1:+61741316 Msa0741950:CDS
ATGGTGTTGTAGGGGTTATA+GGG 0.369231 5_1:-61742720 None:intergenic
GGAGGGTTTGATGGTGTTGT+TGG 0.378684 5_1:-61742601 None:intergenic
GTGATGGGGTGGGAGTTGAC+GGG 0.386524 5_1:-61741991 None:intergenic
CCTCCTGATGGAGGATTTGA+TGG 0.388029 5_1:-61742802 None:intergenic
ATACTCACCCACAACTCATC+TGG 0.388415 5_1:+61743407 Msa0741950:CDS
GAGGGTTTGATGGTGTTGTA+GGG 0.394351 5_1:-61742729 None:intergenic
GGAGGGTTTGATGGCGTTGT+TGG 0.394550 5_1:-61742475 None:intergenic
CCATCGCCTGAGGGTGGTGT+TGG 0.396249 5_1:-61742235 None:intergenic
CACCACTCTGGAGGTGGTTG+TGG 0.399138 5_1:+61741659 Msa0741950:CDS
CCACCATCTGAGGGTGGTGA+TGG 0.399986 5_1:-61741884 None:intergenic
CCACCATCTGAGGGTGGTGA+TGG 0.401009 5_1:-61742118 None:intergenic
GAGGGTGGACAGTCGCTAGT+TGG 0.402392 5_1:-61742325 None:intergenic
TTGGGCTTGAGGGTGTTGTC+GGG 0.402426 5_1:-61742360 None:intergenic
ATGGTGTTGTCGGGGTTATA+GGG 0.404585 5_1:-61742528 None:intergenic
CACTACCTGATGGTGGTGAC+GGG 0.407500 5_1:-61742063 None:intergenic
TGATGGGGTGGGAGTTGACG+GGG 0.408491 5_1:-61741990 None:intergenic
TTCCGTCACCACCGGGTGAT+GGG 0.411470 5_1:-61741955 None:intergenic
TCTTACCATGTTCACAATGC+TGG 0.414379 5_1:+61741274 Msa0741950:CDS
GGGGTAGGAGTTGACGGGGT+TGG 0.415515 5_1:-61742097 None:intergenic
CATAGTTGCTTTGAGAGAAA+AGG 0.419458 5_1:-61741225 None:intergenic
GGGGTTGGAGTTGATGGTGT+TGG 0.422784 5_1:-61742043 None:intergenic
GTTGGGGTTAAAGGGTCTGT+TGG 0.424256 5_1:-61742775 None:intergenic
CTGACTTGATCAGTTGTGTA+AGG 0.425458 5_1:-61743607 None:intergenic
CCACCATCCGATGGTGGTGA+TGG 0.425647 5_1:-61742007 None:intergenic
CTAGGCTGGTGGGGAACCTT+AGG 0.427247 5_1:+61743436 Msa0741950:CDS
GGGGTAGGAGTTGATGGGGT+TGG 0.431600 5_1:-61741863 None:intergenic
GATGGCGTTGTTGGAGTTGA+GGG 0.431885 5_1:-61742466 None:intergenic
GGGGTTAAAGGGTCTGTTGG+TGG 0.432533 5_1:-61742772 None:intergenic
TTGGAGTTGAGGGTGTTGTT+GGG 0.432590 5_1:-61742456 None:intergenic
GTTGGAGTTGAGGGTGTTGT+TGG 0.433606 5_1:-61742457 None:intergenic
CTGAGACTTGCACCGAGTCC+TGG 0.434073 5_1:-61743484 None:intergenic
TGTTGATGGTGTTGGGCTTG+AGG 0.440541 5_1:-61742371 None:intergenic
AAAGGAAAGGGAGGATTTGG+AGG 0.443542 5_1:-61741207 None:intergenic
CCTGAGGGTGGTGTTGGGGA+TGG 0.448406 5_1:-61742229 None:intergenic
ATGGTGTTGTTGGAGTTATA+GGG 0.452403 5_1:-61742591 None:intergenic
ACGCCATCAAACCCTCCATC+AGG 0.456948 5_1:+61742481 Msa0741950:CDS
GGATCATAACTTCCACCTCC+TGG 0.463129 5_1:-61742208 None:intergenic
CACCATCTGAGGGTGGTGAT+GGG 0.463896 5_1:-61742117 None:intergenic
GTGATGGGGTAGGAGTTGAT+GGG 0.464200 5_1:-61741868 None:intergenic
GGTGACGGAGTTGGAGTTGA+TGG 0.464383 5_1:-61741815 None:intergenic
CTTCCGTCACCACCGGGTGA+TGG 0.465953 5_1:-61741956 None:intergenic
TTCCATCACCACCTGGTGAT+GGG 0.467491 5_1:-61742159 None:intergenic
TACTCACCCACAACTCATCT+GGG 0.467667 5_1:+61743408 Msa0741950:CDS
CACCATCCGATGGTGGTGAT+GGG 0.468580 5_1:-61742006 None:intergenic
GTTGGGGTTATAGGGTCTGA+TGG 0.469463 5_1:-61742646 None:intergenic
TCACCACCTGGTGATGGGGT+TGG 0.473993 5_1:-61742154 None:intergenic
TTTGGTGTGCATAGTCTGCC+AGG 0.477495 5_1:+61743466 Msa0741950:CDS
GTGATGGGGTAGGAGTTGAC+GGG 0.480753 5_1:-61742102 None:intergenic
GTTCACAATGCTGGTTGCAT+TGG 0.481392 5_1:+61741283 Msa0741950:CDS
TGCTTTGAGAGAAAAGGAAA+GGG 0.482585 5_1:-61741219 None:intergenic
GGAGTTGGAGTTGATGGAGT+TGG 0.483323 5_1:-61741809 None:intergenic
ATCCGATGGTGGTGATGGGG+TGG 0.484247 5_1:-61742002 None:intergenic
AGGGTGTTGTCGGGCTTGTA+GGG 0.484463 5_1:-61742351 None:intergenic
CCACTACCTGATGGTGGTGA+CGG 0.485876 5_1:-61742064 None:intergenic
AGGATTTGATGGTGTTGTTG+GGG 0.486806 5_1:-61742791 None:intergenic
CCATCTCACCACTCTGGAGG+TGG 0.490627 5_1:+61741653 Msa0741950:CDS
TGATGGCGTTGTTGGAGTTG+AGG 0.490655 5_1:-61742467 None:intergenic
TCACCACCGGGTGATGGGGT+TGG 0.497318 5_1:-61741950 None:intergenic
ACCCCATCACCCGGTGGTGA+CGG 0.497936 5_1:+61741953 Msa0741950:CDS
GGGGTGGGAGTTGACGGGGT+TGG 0.499225 5_1:-61741986 None:intergenic
ACCGTGACCGTGAGAGGGTG+AGG 0.499821 5_1:-61741711 None:intergenic
GTTGGGGTTATAGGGTCTTG+TGG 0.501820 5_1:-61742841 None:intergenic
TCCTCACCCTCTCACGGTCA+CGG 0.503431 5_1:+61741710 Msa0741950:CDS
AGGGAACTTGTTGTTCACTA+AGG 0.504759 5_1:-61743587 None:intergenic
TGGAGAAGTGAGTGAAGAGT+GGG 0.505317 5_1:-61741179 None:intergenic
ACCCCATCACCAGGTGGTGA+TGG 0.505748 5_1:+61742157 Msa0741950:CDS
CCATCAACTCCTCCAGGAGG+TGG 0.507930 5_1:+61742196 Msa0741950:CDS
ACACCATCAAACCCACCATC+AGG 0.508402 5_1:+61742544 Msa0741950:CDS
TTGCTTTGAGAGAAAAGGAA+AGG 0.510249 5_1:-61741220 None:intergenic
GGGTGGACAGTCGCTAGTTG+GGG 0.510353 5_1:-61742323 None:intergenic
CTGGGGATTACTAGGCTGGT+GGG 0.511530 5_1:+61743426 Msa0741950:CDS
AGTGGCACTCCACCCTCTAG+TGG 0.511563 5_1:+61741686 Msa0741950:CDS
TCAAACCCTCCCTCAGGAGA+TGG 0.513068 5_1:+61742397 Msa0741950:CDS
CCATCCCCAACACCACCCTC+AGG 0.514434 5_1:+61742229 Msa0741950:CDS
AGGGTTTGATGGTGTTGTTG+GGG 0.514820 5_1:-61742662 None:intergenic
AGGGTTTGATGGTGTTGTTG+GGG 0.514820 5_1:-61742884 None:intergenic
TCATCTGGGGATTACTAGGC+TGG 0.515340 5_1:+61743422 Msa0741950:CDS
GAGTGTAACTTCCACCGGAT+GGG 0.517224 5_1:-61742285 None:intergenic
CACCATCTGAGGGTGGTGAT+GGG 0.517634 5_1:-61741883 None:intergenic
TGCAACCAGCATTGTGAACA+TGG 0.518407 5_1:-61741279 None:intergenic
ACTGTAACTTCCGTCACCAC+CGG 0.520564 5_1:-61741963 None:intergenic
TTGTAGTACCCTCCTGATGG+AGG 0.521570 5_1:-61742904 None:intergenic
CGCCATCAAACCCTCCATCA+GGG 0.521784 5_1:+61742482 Msa0741950:CDS
CCAACCCCGTCACCACCATC+AGG 0.524167 5_1:+61742058 Msa0741950:CDS
CCACTGCCTGACGGTGGTGA+CGG 0.525331 5_1:-61741830 None:intergenic
TGTAACTTCCACTGCCTGAA+GGG 0.525487 5_1:-61741784 None:intergenic
AGGGTTTGATGGTGTTGTTG+GGG 0.525570 5_1:-61742857 None:intergenic
GGAAAGGGAGGATTTGGAGG+TGG 0.526743 5_1:-61741204 None:intergenic
CTTCCATCACCACCTGGTGA+TGG 0.528472 5_1:-61742160 None:intergenic
AGGGTTTGATGGTGTTGTAG+GGG 0.529064 5_1:-61742728 None:intergenic
GAGTTATAGTACCCTCCTGA+TGG 0.529644 5_1:-61742685 None:intergenic
GTCGGGCTTGTAGGGTCTGA+GGG 0.530144 5_1:-61742343 None:intergenic
TTTGAGAGAAAAGGAAAGGG+AGG 0.531290 5_1:-61741216 None:intergenic
TCCGATGGTGGTGATGGGGT+GGG 0.531969 5_1:-61742001 None:intergenic
GTTGGGCTTGTAGGATCTTG+TGG 0.533149 5_1:-61742439 None:intergenic
CCTGGAGGAGTTGATGGAGT+TGG 0.533764 5_1:-61742190 None:intergenic
ACACCATCAAACCCTCCATC+AGG 0.533807 5_1:+61742607 Msa0741950:CDS
ACACCATCAAACCCTCCATC+AGG 0.533807 5_1:+61742670 Msa0741950:CDS
ACACCATCAAACCCTCCATC+AGG 0.533807 5_1:+61742892 Msa0741950:CDS
CCGTCACCACCGTCAGGCAG+TGG 0.535744 5_1:+61741830 Msa0741950:CDS
GAGCGCATCAGTTCTTGTGT+TGG 0.536546 5_1:-61743524 None:intergenic
CACGGTCACGGTCATGGTCA+TGG 0.538873 5_1:+61741722 Msa0741950:CDS
TTGGAGAAGTGAGTGAAGAG+TGG 0.539325 5_1:-61741180 None:intergenic
ACACCATCAAATCCTCCATC+AGG 0.539376 5_1:+61742799 Msa0741950:CDS
GTGCATAGTCTGCCAGGACT+CGG 0.540042 5_1:+61743472 Msa0741950:CDS
AGTGTAACTTCCACCGGATG+GGG 0.540412 5_1:-61742284 None:intergenic
ACCCTCCATCTCCTGAGGGA+GGG 0.540485 5_1:-61742402 None:intergenic
GTCGGGGTTATAGGGTCTGA+TGG 0.540943 5_1:-61742520 None:intergenic
TCACCACCATCGGATGGTGG+TGG 0.541520 5_1:+61742010 Msa0741950:CDS
GAGTCGTAGCCTCCTGATGG+AGG 0.541984 5_1:-61742619 None:intergenic
GTAATCCCCAGATGAGTTGT+GGG 0.542041 5_1:-61743414 None:intergenic
CCCTCTCACGGTCACGGTCA+TGG 0.542420 5_1:+61741716 Msa0741950:CDS
TTGTAACTTCCACTGCCTGA+AGG 0.542724 5_1:-61741785 None:intergenic
GGTCATGGTCATAGTCATCA+TGG 0.543471 5_1:+61741737 Msa0741950:CDS
AGAACTTCCGCCACCATCTG+AGG 0.544370 5_1:-61742128 None:intergenic
CCAACTCCGTCACCACCGTC+AGG 0.546027 5_1:+61741824 Msa0741950:CDS
CCTGATGGTGGTGACGGGGT+TGG 0.546035 5_1:-61742058 None:intergenic
TCTGGGGATTACTAGGCTGG+TGG 0.546406 5_1:+61743425 Msa0741950:CDS
GGGGTTATAGGGTCTGATGG+TGG 0.547623 5_1:-61742643 None:intergenic
CCAACTCCATCAACTCCTCC+AGG 0.548752 5_1:+61742190 Msa0741950:CDS
TCCCACCCCATCACCACCAT+CGG 0.549269 5_1:+61742000 Msa0741950:CDS
GTTGGAGTTATAGGGTCTGA+TGG 0.551071 5_1:-61742583 None:intergenic
ATCGCCTGAGGGTGGTGTTG+GGG 0.552008 5_1:-61742233 None:intergenic
TGTCGGGCTTGTAGGGTCTG+AGG 0.552169 5_1:-61742344 None:intergenic
TGTAGTACCCTCCTGATGGA+GGG 0.552185 5_1:-61742903 None:intergenic
GAGTCGTAGCCTCCTGTCGG+AGG 0.553673 5_1:-61742748 None:intergenic
CTGTAACTTCCGTCACCACC+GGG 0.553891 5_1:-61741962 None:intergenic
GTGGCACTCCACCCTCTAGT+GGG 0.553903 5_1:+61741687 Msa0741950:CDS
AGTCATCATGGCCATGGTCA+TGG 0.554015 5_1:+61741749 Msa0741950:CDS
CCAACACCACCCTCAGGCGA+TGG 0.554158 5_1:+61742235 Msa0741950:CDS
TCTGAGGGTGGTGATGGGGT+AGG 0.554921 5_1:-61741878 None:intergenic
TCTGAGGGTGGTGATGGGGT+AGG 0.554921 5_1:-61742112 None:intergenic
AGAACTTCCTGCTTGAGTGT+TGG 0.554962 5_1:-61741339 None:intergenic
GGAGTGTAACTTCCACCGGA+TGG 0.555144 5_1:-61742286 None:intergenic
AGTAATCCCCAGATGAGTTG+TGG 0.557092 5_1:-61743415 None:intergenic
GTAATGGCCAACACTCAAGC+AGG 0.560348 5_1:+61741332 Msa0741950:CDS
GGGGTTATAGGGTCTTGTGG+TGG 0.562112 5_1:-61742838 None:intergenic
CTCGGAGCACTTTACAGAGA+AGG 0.562112 5_1:+61743544 Msa0741950:CDS
TCCGTCACCACCGGGTGATG+GGG 0.566159 5_1:-61741954 None:intergenic
GAGTTGTAGTACCCTCCTGA+TGG 0.566528 5_1:-61742814 None:intergenic
GAGTTGTAGTACCCTCCTGA+TGG 0.566528 5_1:-61742907 None:intergenic
TCCATCACCACCTGGTGATG+GGG 0.568364 5_1:-61742158 None:intergenic
GAGTCGTAGCCTCCTGATGG+TGG 0.568633 5_1:-61742556 None:intergenic
CCTGACGGTGGTGACGGAGT+TGG 0.568744 5_1:-61741824 None:intergenic
GTAGGGGTTATAGGGTCTTG+TGG 0.570635 5_1:-61742712 None:intergenic
TCTGATCCAACCCCATCACC+AGG 0.571020 5_1:+61742148 Msa0741950:CDS
GGTGAGTCGTAGCCTCCTGA+TGG 0.572152 5_1:-61742622 None:intergenic
AACCCTCCCTCAGGAGATGG+AGG 0.574415 5_1:+61742400 Msa0741950:CDS
AGTCGTAGCCTCCTGATGGT+GGG 0.574436 5_1:-61742555 None:intergenic
GGTGAGTCGTAGCCTCCTGT+CGG 0.575355 5_1:-61742751 None:intergenic
TTATAGTACCCTCCTGATGG+AGG 0.576811 5_1:-61742682 None:intergenic
CCGTCACCACCATCAGGTAG+TGG 0.578726 5_1:+61742064 Msa0741950:CDS
CCACCTCCAGAGTGGTGAGA+TGG 0.581589 5_1:-61741653 None:intergenic
AGTCGTAGCCTCCTGTCGGA+GGG 0.581679 5_1:-61742747 None:intergenic
TCACCACCCTCAGATGGTGG+TGG 0.584377 5_1:+61741887 Msa0741950:CDS
ACCATCCGATGGTGGTGATG+GGG 0.584551 5_1:-61742005 None:intergenic
TGGGTTTGATGGTGTTGTCG+GGG 0.587568 5_1:-61742536 None:intergenic
AGAACTTCCACCACCATCTG+AGG 0.587872 5_1:-61741894 None:intergenic
GGTCATAGTCATCATGGCCA+TGG 0.588281 5_1:+61741743 Msa0741950:CDS
AGTGGGTCCTCACCCTCTCA+CGG 0.589505 5_1:+61741704 Msa0741950:CDS
ACACCATCAAACCCTCCCTC+AGG 0.589515 5_1:+61742391 Msa0741950:CDS
ACCCCATCACCACCATCGGA+TGG 0.589544 5_1:+61742004 Msa0741950:CDS
CCTCCAGAGTGGTGAGATGG+TGG 0.589591 5_1:-61741650 None:intergenic
ACCCCATCACCACCCTCAGA+TGG 0.591637 5_1:+61741881 Msa0741950:CDS
ACCCCATCACCACCCTCAGA+TGG 0.591637 5_1:+61742115 Msa0741950:CDS
ACACCATCAAACCCTCCGAC+AGG 0.592243 5_1:+61742736 Msa0741950:CDS
AGTTGGAGTGTAACTTCCAC+CGG 0.592684 5_1:-61742290 None:intergenic
CCATCACCACCCTCAGATGG+TGG 0.592841 5_1:+61742118 Msa0741950:CDS
AACACAAGAACTGATGCGCT+CGG 0.597150 5_1:+61743526 Msa0741950:CDS
TTATAACTTCCATCGCCTGA+GGG 0.597171 5_1:-61742244 None:intergenic
CCATTACAGGAACAATAACA+AGG 0.597546 5_1:-61741316 None:intergenic
TGTGATCCAACCCCATCACC+CGG 0.598262 5_1:+61741944 Msa0741950:CDS
GGTGAGTCGTAGCCTCCTGA+TGG 0.598955 5_1:-61742559 None:intergenic
CTGTAACTTCCACTGCCTGA+CGG 0.599012 5_1:-61741839 None:intergenic
TGATGGGGTAGGAGTTGATG+GGG 0.600582 5_1:-61741867 None:intergenic
ACCATCTGAGGGTGGTGATG+GGG 0.600702 5_1:-61741882 None:intergenic
TATAGTACCCTCCTGATGGA+GGG 0.602175 5_1:-61742681 None:intergenic
TGGGGATTACTAGGCTGGTG+GGG 0.602911 5_1:+61743427 Msa0741950:CDS
ATTATAACTTCCATCGCCTG+AGG 0.603880 5_1:-61742245 None:intergenic
AGTCGTAGCCTCCTGATGGA+GGG 0.604475 5_1:-61742618 None:intergenic
GCCATCAAACCCTCCATCAG+GGG 0.604734 5_1:+61742483 Msa0741950:CDS
ACCATCTGAGGGTGGTGATG+GGG 0.605979 5_1:-61742116 None:intergenic
TACCCTCCATCTCCTGAGGG+AGG 0.606933 5_1:-61742403 None:intergenic
TCACCACCCTCAGATGGTGG+CGG 0.608587 5_1:+61742121 Msa0741950:CDS
TGACTTGATCAGTTGTGTAA+GGG 0.610270 5_1:-61743606 None:intergenic
TTGTAGTACCCTCCTGATGG+AGG 0.611603 5_1:-61742811 None:intergenic
GTAACTTCCACTGCCTGAAG+GGG 0.613155 5_1:-61741783 None:intergenic
CTTGTGTTGGAAAGTGCTTG+TGG 0.615132 5_1:-61743511 None:intergenic
CCATCACCACCCTCAGATGG+TGG 0.615263 5_1:+61741884 Msa0741950:CDS
AGTCCACCATCTCACCACTC+TGG 0.616085 5_1:+61741647 Msa0741950:CDS
AACTAATTAGATCATGCTCT+AGG 0.616122 5_1:-61743718 None:intergenic
GGGGTTATAGGGTCTTGTGG+TGG 0.620774 5_1:-61742709 None:intergenic
GAACTTCCGCCACCATCTGA+GGG 0.623115 5_1:-61742127 None:intergenic
CCATCAAACCCTCCATCAGG+AGG 0.623480 5_1:+61742673 Msa0741950:CDS
CCATCAAACCCTCCATCAGG+AGG 0.623480 5_1:+61742895 Msa0741950:CDS
GGAGGTGGTTGTGGTAGCAG+TGG 0.625102 5_1:+61741668 Msa0741950:CDS
GGGCTTGTAGGGTCTGAGGG+TGG 0.625596 5_1:-61742340 None:intergenic
GGAGTTATAGGGTCTGATGG+TGG 0.625677 5_1:-61742580 None:intergenic
TAACTTCCATCGCCTGAGGG+TGG 0.628597 5_1:-61742241 None:intergenic
GTGTAACTTCCATCACCACC+TGG 0.630491 5_1:-61742166 None:intergenic
CCATCAAATCCTCCATCAGG+AGG 0.632305 5_1:+61742802 Msa0741950:CDS
CCATCACCACCATCGGATGG+TGG 0.633003 5_1:+61742007 Msa0741950:CDS
GGTGAGGACCCACTAGAGGG+TGG 0.634125 5_1:-61741695 None:intergenic
TAACTTCCACCACCATCCGA+TGG 0.637629 5_1:-61742016 None:intergenic
CCACCATCTCACCACTCTGG+AGG 0.638939 5_1:+61741650 Msa0741950:CDS
GAACTTCCACCACCATCTGA+GGG 0.640554 5_1:-61741893 None:intergenic
CCATCAAACCCTCCGACAGG+AGG 0.641111 5_1:+61742739 Msa0741950:CDS
AGAGGGTGAGGACCCACTAG+AGG 0.641171 5_1:-61741699 None:intergenic
TAGTTCAGTAGATAAATCTG+AGG 0.642316 5_1:-61741363 None:intergenic
TAGTACCCTCCATCTCCTGA+GGG 0.643913 5_1:-61742406 None:intergenic
ATAGTACCCTCCATCTCCTG+AGG 0.644068 5_1:-61742407 None:intergenic
GTGTAACTTCCACTACCTGA+TGG 0.649420 5_1:-61742073 None:intergenic
GTGTAACTTCCACCGGATGG+GGG 0.649495 5_1:-61742283 None:intergenic
GAGGGTGAGGACCCACTAGA+GGG 0.654500 5_1:-61741698 None:intergenic
TGGGGTTGGATCACAATTTG+GGG 0.655319 5_1:-61741936 None:intergenic
ACCATGACCGTGACCGTGAG+AGG 0.657219 5_1:-61741717 None:intergenic
ACCCTCCCTCAGGAGATGGA+GGG 0.659217 5_1:+61742401 Msa0741950:CDS
CCATCAAACCCTCCATCAGG+GGG 0.662738 5_1:+61742484 Msa0741950:CDS
GGGGTTATAGGGTCTGATGG+TGG 0.665691 5_1:-61742517 None:intergenic
CTTCCACCACCATCCGATGG+TGG 0.666694 5_1:-61742013 None:intergenic
CCATCAAACCCTCCATCAGG+AGG 0.667889 5_1:+61742610 Msa0741950:CDS
AGTTCAGTAGATAAATCTGA+GGG 0.668203 5_1:-61741362 None:intergenic
CATCAAACCCTCCATCAGGA+GGG 0.671661 5_1:+61742674 Msa0741950:CDS
CATCAAATCCTCCATCAGGA+GGG 0.671661 5_1:+61742803 Msa0741950:CDS
CATCAAACCCTCCATCAGGA+GGG 0.671661 5_1:+61742896 Msa0741950:CDS
TAACTTCCACTGCCTGAAGG+GGG 0.677446 5_1:-61741782 None:intergenic
CCATCAAACCCACCATCAGG+AGG 0.679038 5_1:+61742547 Msa0741950:CDS
GGTGGACAGTCGCTAGTTGG+GGG 0.681046 5_1:-61742322 None:intergenic
ACTACCTGATGGTGGTGACG+GGG 0.681215 5_1:-61742062 None:intergenic
TCATAACTTCCACCTCCTGG+AGG 0.682134 5_1:-61742205 None:intergenic
TGATGGGGTAGGAGTTGACG+GGG 0.684030 5_1:-61742101 None:intergenic
CCATGACCGTGACCGTGAGA+GGG 0.687062 5_1:-61741716 None:intergenic
GGGCTTGTAGGATCTTGTGG+TGG 0.691171 5_1:-61742436 None:intergenic
CTTCCGCCACCATCTGAGGG+TGG 0.693273 5_1:-61742124 None:intergenic
ACTCACCCACAACTCATCTG+GGG 0.705013 5_1:+61743409 Msa0741950:CDS
CTTCCACCACCATCTGAGGG+TGG 0.705692 5_1:-61741890 None:intergenic
TAACTTCCACTGCCTGACGG+TGG 0.714222 5_1:-61741836 None:intergenic
TACCACAACCACCTCCAGAG+TGG 0.718161 5_1:-61741661 None:intergenic
GTGATGATGATCCATGACCA+TGG 0.722892 5_1:-61741760 None:intergenic
TAACTTCCACTACCTGATGG+TGG 0.726578 5_1:-61742070 None:intergenic
GATCCAACCCCATCACCAGG+TGG 0.727652 5_1:+61742151 Msa0741950:CDS
ACTCCATCAACTCCTCCAGG+AGG 0.736849 5_1:+61742193 Msa0741950:CDS
GATCCAACCCCATCACCCGG+TGG 0.738890 5_1:+61741947 Msa0741950:CDS
GGGGTTGGATCACAATTTGG+GGG 0.808050 5_1:-61741935 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTAATGATATGATTT+TGG + chr5_1:61741446-61741465 Msa0741950:intron 10.0%
!!! AAAAAATATAGTTTTTATCA+GGG - chr5_1:61743120-61743139 None:intergenic 10.0%
!!! TAAAAAATATAGTTTTTATC+AGG - chr5_1:61743121-61743140 None:intergenic 10.0%
!!! AAAAATATAGTTTTTATCAG+GGG - chr5_1:61743119-61743138 None:intergenic 15.0%
!! TGAAAATTACATACATATTA+CGG - chr5_1:61743206-61743225 None:intergenic 15.0%
!!! TTATATTTTCAAAATCGATA+TGG - chr5_1:61743247-61743266 None:intergenic 15.0%
!! AAATATAAATCATGTACAAA+AGG + chr5_1:61743259-61743278 Msa0741950:intron 15.0%
!!! TTCTTATTTATGCAAAATAG+TGG + chr5_1:61741419-61741438 Msa0741950:intron 20.0%
!!! AAAAAAGTTTTATAGCTTCA+AGG - chr5_1:61743088-61743107 None:intergenic 20.0%
!!! CAACATGAATAAATTTTACA+TGG - chr5_1:61743173-61743192 None:intergenic 20.0%
!! AAAATTACATACATATTACG+GGG - chr5_1:61743204-61743223 None:intergenic 20.0%
!! GAAAATTACATACATATTAC+GGG - chr5_1:61743205-61743224 None:intergenic 20.0%
!!! TTTTGATAATTTACATCATG+AGG - chr5_1:61743317-61743336 None:intergenic 20.0%
!! TGTTGTGTAATACATTGATT+TGG + chr5_1:61741605-61741624 Msa0741950:intron 25.0%
!! AAATCGATATGGACTAAATA+AGG - chr5_1:61743236-61743255 None:intergenic 25.0%
!! TACAAAAGGTAGTTTTTACA+GGG + chr5_1:61743273-61743292 Msa0741950:intron 25.0%
! ATGAGGTTTAAATATGTTGT+TGG - chr5_1:61743300-61743319 None:intergenic 25.0%
AGTTCAGTAGATAAATCTGA+GGG - chr5_1:61741365-61741384 None:intergenic 30.0%
TAGTTCAGTAGATAAATCTG+AGG - chr5_1:61741366-61741385 None:intergenic 30.0%
CAATGTATTACACAACATGA+GGG - chr5_1:61741602-61741621 None:intergenic 30.0%
TCAATGTATTACACAACATG+AGG - chr5_1:61741603-61741622 None:intergenic 30.0%
!! CATTGATTTGGATTTGTTGA+AGG + chr5_1:61741617-61741636 Msa0741950:intron 30.0%
TATGTTGCACTGTAATGTAA+AGG + chr5_1:61743056-61743075 Msa0741950:intron 30.0%
! GTACAAAAGGTAGTTTTTAC+AGG + chr5_1:61743272-61743291 Msa0741950:intron 30.0%
!! TGCTTTGAGAGAAAAGGAAA+GGG - chr5_1:61741222-61741241 None:intergenic 35.0%
!! TTGCTTTGAGAGAAAAGGAA+AGG - chr5_1:61741223-61741242 None:intergenic 35.0%
!! CATAGTTGCTTTGAGAGAAA+AGG - chr5_1:61741228-61741247 None:intergenic 35.0%
! CTTTTCTCTCAAAGCAACTA+TGG + chr5_1:61741226-61741245 Msa0741950:exon 35.0%
CCATTACAGGAACAATAACA+AGG - chr5_1:61741319-61741338 None:intergenic 35.0%
!! CCTTGTTATTGTTCCTGTAA+TGG + chr5_1:61741316-61741335 Msa0741950:CDS 35.0%
!! ATGGTGTTGTTGGAGTTATA+GGG - chr5_1:61742594-61742613 None:intergenic 35.0%
TTACAGTGCAACATAGTAGA+AGG - chr5_1:61743051-61743070 None:intergenic 35.0%
TGACTTGATCAGTTGTGTAA+GGG - chr5_1:61743609-61743628 None:intergenic 35.0%
! AGGCTTAATTTTTCCCTCAT+TGG - chr5_1:61743701-61743720 None:intergenic 35.0%
AGAAAAGGAAAGGGAGGATT+TGG - chr5_1:61741213-61741232 None:intergenic 40.0%
TTTGAGAGAAAAGGAAAGGG+AGG - chr5_1:61741219-61741238 None:intergenic 40.0%
TCTTACCATGTTCACAATGC+TGG + chr5_1:61741274-61741293 Msa0741950:CDS 40.0%
CTTGAAAGCTACACAGTAGT+AGG + chr5_1:61741475-61741494 Msa0741950:intron 40.0%
ATGGGGTTGGATCACAATTT+GGG - chr5_1:61741940-61741959 None:intergenic 40.0%
TTATAACTTCCATCGCCTGA+GGG - chr5_1:61742247-61742266 None:intergenic 40.0%
ATTATAACTTCCATCGCCTG+AGG - chr5_1:61742248-61742267 None:intergenic 40.0%
!! TTGATGGTGTTGATGGTGTT+GGG - chr5_1:61742381-61742400 None:intergenic 40.0%
!! TTTGATGGTGTTGATGGTGT+TGG - chr5_1:61742382-61742401 None:intergenic 40.0%
!! GATGGTGTTGTTGGAGTTAT+AGG - chr5_1:61742595-61742614 None:intergenic 40.0%
!! ATGGTGTTGTTGGGGTTATA+GGG - chr5_1:61742657-61742676 None:intergenic 40.0%
!! ATGGTGTTGTAGGGGTTATA+GGG - chr5_1:61742723-61742742 None:intergenic 40.0%
!! ATGGTGTTGTTGGGGTTAAA+GGG - chr5_1:61742786-61742805 None:intergenic 40.0%
!! AGGATTTGATGGTGTTGTTG+GGG - chr5_1:61742794-61742813 None:intergenic 40.0%
!! GAGGATTTGATGGTGTTGTT+GGG - chr5_1:61742795-61742814 None:intergenic 40.0%
!! ATGGTGTTGTTGGGGTTATA+GGG - chr5_1:61742657-61742676 None:intergenic 40.0%
!! AAGGGTTTGATGGTGTTGTT+GGG - chr5_1:61742861-61742880 None:intergenic 40.0%
!! AAAGGGTTTGATGGTGTTGT+TGG - chr5_1:61742862-61742881 None:intergenic 40.0%
!! ATGGTGTTGTTGGGGTTAAA+GGG - chr5_1:61742786-61742805 None:intergenic 40.0%
TACAACTCACCACCAACTTA+TGG + chr5_1:61742922-61742941 Msa0741950:intron 40.0%
ACTTACTTGCATGTACCAGT+GGG - chr5_1:61743027-61743046 None:intergenic 40.0%
AACTTACTTGCATGTACCAG+TGG - chr5_1:61743028-61743047 None:intergenic 40.0%
! GGAACCTTAGGCAATGTTTT+TGG + chr5_1:61743448-61743467 Msa0741950:CDS 40.0%
CACACCAAAAACATTGCCTA+AGG - chr5_1:61743455-61743474 None:intergenic 40.0%
!! AGGGAACTTGTTGTTCACTA+AGG - chr5_1:61743590-61743609 None:intergenic 40.0%
! CTGACTTGATCAGTTGTGTA+AGG - chr5_1:61743610-61743629 None:intergenic 40.0%
AGCATCACTCAGCTCAAATA+AGG + chr5_1:61743642-61743661 Msa0741950:CDS 40.0%
! ACAAGCACATCTTTTCCAGA+TGG + chr5_1:61743675-61743694 Msa0741950:CDS 40.0%
TGGAGAAGTGAGTGAAGAGT+GGG - chr5_1:61741182-61741201 None:intergenic 45.0%
TTGGAGAAGTGAGTGAAGAG+TGG - chr5_1:61741183-61741202 None:intergenic 45.0%
AAAGGAAAGGGAGGATTTGG+AGG - chr5_1:61741210-61741229 None:intergenic 45.0%
TGCAACCAGCATTGTGAACA+TGG - chr5_1:61741282-61741301 None:intergenic 45.0%
! GTTCACAATGCTGGTTGCAT+TGG + chr5_1:61741283-61741302 Msa0741950:CDS 45.0%
AGAACTTCCTGCTTGAGTGT+TGG - chr5_1:61741342-61741361 None:intergenic 45.0%
GGTCATGGTCATAGTCATCA+TGG + chr5_1:61741737-61741756 Msa0741950:CDS 45.0%
! GTGATGATGATCCATGACCA+TGG - chr5_1:61741763-61741782 None:intergenic 45.0%
TGTAACTTCCACTGCCTGAA+GGG - chr5_1:61741787-61741806 None:intergenic 45.0%
TTGTAACTTCCACTGCCTGA+AGG - chr5_1:61741788-61741807 None:intergenic 45.0%
!! ACAATTTGGGGGAGTTGATG+GGG - chr5_1:61741927-61741946 None:intergenic 45.0%
! CACAATTTGGGGGAGTTGAT+GGG - chr5_1:61741928-61741947 None:intergenic 45.0%
TCACAATTTGGGGGAGTTGA+TGG - chr5_1:61741929-61741948 None:intergenic 45.0%
TGGGGTTGGATCACAATTTG+GGG - chr5_1:61741939-61741958 None:intergenic 45.0%
GATGGGGTTGGATCACAATT+TGG - chr5_1:61741941-61741960 None:intergenic 45.0%
TAACTTCCACTACCTGATGG+TGG - chr5_1:61742073-61742092 None:intergenic 45.0%
GTGTAACTTCCACTACCTGA+TGG - chr5_1:61742076-61742095 None:intergenic 45.0%
AGTTGGAGTGTAACTTCCAC+CGG - chr5_1:61742293-61742312 None:intergenic 45.0%
!! TTGGAGTTGAGGGTGTTGTT+GGG - chr5_1:61742459-61742478 None:intergenic 45.0%
!! ATGGTGTTGTCGGGGTTATA+GGG - chr5_1:61742531-61742550 None:intergenic 45.0%
GTTGGAGTTATAGGGTCTGA+TGG - chr5_1:61742586-61742605 None:intergenic 45.0%
!! GATGGTGTTGTTGGGGTTAT+AGG - chr5_1:61742658-61742677 None:intergenic 45.0%
!! AGGGTTTGATGGTGTTGTTG+GGG - chr5_1:61742602-61742621 None:intergenic 45.0%
!! GAGGGTTTGATGGTGTTGTT+GGG - chr5_1:61742603-61742622 None:intergenic 45.0%
TATAGTACCCTCCTGATGGA+GGG - chr5_1:61742684-61742703 None:intergenic 45.0%
TTATAGTACCCTCCTGATGG+AGG - chr5_1:61742685-61742704 None:intergenic 45.0%
GAGTTATAGTACCCTCCTGA+TGG - chr5_1:61742688-61742707 None:intergenic 45.0%
!! GATGGTGTTGTAGGGGTTAT+AGG - chr5_1:61742724-61742743 None:intergenic 45.0%
!! AGGGTTTGATGGTGTTGTAG+GGG - chr5_1:61742731-61742750 None:intergenic 45.0%
!! GAGGGTTTGATGGTGTTGTA+GGG - chr5_1:61742732-61742751 None:intergenic 45.0%
!! GATGGTGTTGTTGGGGTTAA+AGG - chr5_1:61742787-61742806 None:intergenic 45.0%
!! GGAGGATTTGATGGTGTTGT+TGG - chr5_1:61742796-61742815 None:intergenic 45.0%
ACACCATCAAATCCTCCATC+AGG + chr5_1:61742799-61742818 Msa0741950:CDS 45.0%
CATCAAATCCTCCATCAGGA+GGG + chr5_1:61742803-61742822 Msa0741950:CDS 45.0%
!! GATGGTGTTGTTGGGGTTAT+AGG - chr5_1:61742658-61742677 None:intergenic 45.0%
!! AGGGTTTGATGGTGTTGTTG+GGG - chr5_1:61742602-61742621 None:intergenic 45.0%
GTTGGGGTTAAAGGGTTTGA+TGG - chr5_1:61742871-61742890 None:intergenic 45.0%
!! GATGGTGTTGTTGGGGTTAA+AGG - chr5_1:61742787-61742806 None:intergenic 45.0%
!! AGGGTTTGATGGTGTTGTTG+GGG - chr5_1:61742602-61742621 None:intergenic 45.0%
!! GAGGGTTTGATGGTGTTGTT+GGG - chr5_1:61742603-61742622 None:intergenic 45.0%
TCACCACCAACTTATGGAAG+TGG + chr5_1:61742928-61742947 Msa0741950:intron 45.0%
! CTACCACTTCCATAAGTTGG+TGG - chr5_1:61742934-61742953 None:intergenic 45.0%
TTCCTCAAATCTGCAGCTAC+TGG + chr5_1:61743383-61743402 Msa0741950:intron 45.0%
TTCCAGTAGCTGCAGATTTG+AGG - chr5_1:61743388-61743407 None:intergenic 45.0%
ATACTCACCCACAACTCATC+TGG + chr5_1:61743407-61743426 Msa0741950:CDS 45.0%
TACTCACCCACAACTCATCT+GGG + chr5_1:61743408-61743427 Msa0741950:CDS 45.0%
GTAATCCCCAGATGAGTTGT+GGG - chr5_1:61743417-61743436 None:intergenic 45.0%
AGTAATCCCCAGATGAGTTG+TGG - chr5_1:61743418-61743437 None:intergenic 45.0%
CAACTCATCTGGGGATTACT+AGG + chr5_1:61743418-61743437 Msa0741950:CDS 45.0%
!! CTTGTGTTGGAAAGTGCTTG+TGG - chr5_1:61743514-61743533 None:intergenic 45.0%
AACACAAGAACTGATGCGCT+CGG + chr5_1:61743526-61743545 Msa0741950:CDS 45.0%
! TCTTTTCCAGATGGCCAATG+AGG + chr5_1:61743684-61743703 Msa0741950:CDS 45.0%
! CTTTTCCAGATGGCCAATGA+GGG + chr5_1:61743685-61743704 Msa0741950:CDS 45.0%
! TTTTTCCCTCATTGGCCATC+TGG - chr5_1:61743693-61743712 None:intergenic 45.0%
!! GCTTGAGTGTTGGCCATTAC+AGG - chr5_1:61741332-61741351 None:intergenic 50.0%
GTAATGGCCAACACTCAAGC+AGG + chr5_1:61741332-61741351 Msa0741950:CDS 50.0%
GGTCATAGTCATCATGGCCA+TGG + chr5_1:61741743-61741762 Msa0741950:CDS 50.0%
AGTCATCATGGCCATGGTCA+TGG + chr5_1:61741749-61741768 Msa0741950:CDS 50.0%
TAACTTCCACTGCCTGAAGG+GGG - chr5_1:61741785-61741804 None:intergenic 50.0%
GTAACTTCCACTGCCTGAAG+GGG - chr5_1:61741786-61741805 None:intergenic 50.0%
!! GGAGTTGGAGTTGATGGAGT+TGG - chr5_1:61741812-61741831 None:intergenic 50.0%
CTGTAACTTCCACTGCCTGA+CGG - chr5_1:61741842-61741861 None:intergenic 50.0%
!! TGATGGGGTAGGAGTTGATG+GGG - chr5_1:61741870-61741889 None:intergenic 50.0%
! GTGATGGGGTAGGAGTTGAT+GGG - chr5_1:61741871-61741890 None:intergenic 50.0%
GAACTTCCACCACCATCTGA+GGG - chr5_1:61741896-61741915 None:intergenic 50.0%
AGAACTTCCACCACCATCTG+AGG - chr5_1:61741897-61741916 None:intergenic 50.0%
GGGGTTGGATCACAATTTGG+GGG - chr5_1:61741938-61741957 None:intergenic 50.0%
ACTGTAACTTCCGTCACCAC+CGG - chr5_1:61741966-61741985 None:intergenic 50.0%
TAACTTCCACCACCATCCGA+TGG - chr5_1:61742019-61742038 None:intergenic 50.0%
TTCCATCACCACCTGGTGAT+GGG - chr5_1:61742162-61742181 None:intergenic 50.0%
GTGTAACTTCCATCACCACC+TGG - chr5_1:61742169-61742188 None:intergenic 50.0%
TCATAACTTCCACCTCCTGG+AGG - chr5_1:61742208-61742227 None:intergenic 50.0%
GGATCATAACTTCCACCTCC+TGG - chr5_1:61742211-61742230 None:intergenic 50.0%
AGTGTAACTTCCACCGGATG+GGG - chr5_1:61742287-61742306 None:intergenic 50.0%
GAGTGTAACTTCCACCGGAT+GGG - chr5_1:61742288-61742307 None:intergenic 50.0%
!! GTTGATGGTGTTGGGCTTGA+GGG - chr5_1:61742373-61742392 None:intergenic 50.0%
!! TGTTGATGGTGTTGGGCTTG+AGG - chr5_1:61742374-61742393 None:intergenic 50.0%
!! GGAGGGTTTGATGGTGTTGA+TGG - chr5_1:61742388-61742407 None:intergenic 50.0%
TAGTACCCTCCATCTCCTGA+GGG - chr5_1:61742409-61742428 None:intergenic 50.0%
ATAGTACCCTCCATCTCCTG+AGG - chr5_1:61742410-61742429 None:intergenic 50.0%
GTTGGGCTTGTAGGATCTTG+TGG - chr5_1:61742442-61742461 None:intergenic 50.0%
!! GTTGGAGTTGAGGGTGTTGT+TGG - chr5_1:61742460-61742479 None:intergenic 50.0%
GATGGCGTTGTTGGAGTTGA+GGG - chr5_1:61742469-61742488 None:intergenic 50.0%
! TGATGGCGTTGTTGGAGTTG+AGG - chr5_1:61742470-61742489 None:intergenic 50.0%
!! GATGGTGTTGTCGGGGTTAT+AGG - chr5_1:61742532-61742551 None:intergenic 50.0%
!! TGGGTTTGATGGTGTTGTCG+GGG - chr5_1:61742539-61742558 None:intergenic 50.0%
!! GTGGGTTTGATGGTGTTGTC+GGG - chr5_1:61742540-61742559 None:intergenic 50.0%
!! GGTGGGTTTGATGGTGTTGT+CGG - chr5_1:61742541-61742560 None:intergenic 50.0%
ACACCATCAAACCCACCATC+AGG + chr5_1:61742544-61742563 Msa0741950:CDS 50.0%
GGAGTTATAGGGTCTGATGG+TGG - chr5_1:61742583-61742602 None:intergenic 50.0%
!! GGAGGGTTTGATGGTGTTGT+TGG - chr5_1:61742604-61742623 None:intergenic 50.0%
ACACCATCAAACCCTCCATC+AGG + chr5_1:61742607-61742626 Msa0741950:CDS 50.0%
GTTGGGGTTATAGGGTCTGA+TGG - chr5_1:61742649-61742668 None:intergenic 50.0%
!! GGAGGGTTTGATGGTGTTGT+TGG - chr5_1:61742604-61742623 None:intergenic 50.0%
ACACCATCAAACCCTCCATC+AGG + chr5_1:61742607-61742626 Msa0741950:CDS 50.0%
CATCAAACCCTCCATCAGGA+GGG + chr5_1:61742611-61742630 Msa0741950:CDS 50.0%
GTAGGGGTTATAGGGTCTTG+TGG - chr5_1:61742715-61742734 None:intergenic 50.0%
!! GGAGGGTTTGATGGTGTTGT+AGG - chr5_1:61742604-61742623 None:intergenic 50.0%
GTTGGGGTTAAAGGGTCTGT+TGG - chr5_1:61742778-61742797 None:intergenic 50.0%
CCTCCTGATGGAGGATTTGA+TGG - chr5_1:61742805-61742824 None:intergenic 50.0%
CCATCAAATCCTCCATCAGG+AGG + chr5_1:61742802-61742821 Msa0741950:CDS 50.0%
TTGTAGTACCCTCCTGATGG+AGG - chr5_1:61742814-61742833 None:intergenic 50.0%
GAGTTGTAGTACCCTCCTGA+TGG - chr5_1:61742817-61742836 None:intergenic 50.0%
GTTGGGGTTATAGGGTCTTG+TGG - chr5_1:61742844-61742863 None:intergenic 50.0%
!! GGAGGGTTTGATGGTGTTGT+TGG - chr5_1:61742604-61742623 None:intergenic 50.0%
ACACCATCAAACCCTCCATC+AGG + chr5_1:61742607-61742626 Msa0741950:CDS 50.0%
CATCAAACCCTCCATCAGGA+GGG + chr5_1:61742611-61742630 Msa0741950:CDS 50.0%
TGTAGTACCCTCCTGATGGA+GGG - chr5_1:61742813-61742832 None:intergenic 50.0%
TTGTAGTACCCTCCTGATGG+AGG - chr5_1:61742814-61742833 None:intergenic 50.0%
GAGTTGTAGTACCCTCCTGA+TGG - chr5_1:61742817-61742836 None:intergenic 50.0%
GGGCTACCACTTCCATAAGT+TGG - chr5_1:61742937-61742956 None:intergenic 50.0%
AAAGGTGGTGTGGGGAAAGT+GGG - chr5_1:61742988-61743007 None:intergenic 50.0%
TTGCATGTACCAGTGGGAGA+TGG - chr5_1:61743021-61743040 None:intergenic 50.0%
ACTCACCCACAACTCATCTG+GGG + chr5_1:61743409-61743428 Msa0741950:CDS 50.0%
TCATCTGGGGATTACTAGGC+TGG + chr5_1:61743422-61743441 Msa0741950:CDS 50.0%
! TTTGGTGTGCATAGTCTGCC+AGG + chr5_1:61743466-61743485 Msa0741950:CDS 50.0%
GAGCGCATCAGTTCTTGTGT+TGG - chr5_1:61743527-61743546 None:intergenic 50.0%
! CTCGGAGCACTTTACAGAGA+AGG + chr5_1:61743544-61743563 Msa0741950:CDS 50.0%
GGGAGGATTTGGAGGTGGTT+TGG - chr5_1:61741202-61741221 None:intergenic 55.0%
GGAAAGGGAGGATTTGGAGG+TGG - chr5_1:61741207-61741226 None:intergenic 55.0%
AGTCCACCATCTCACCACTC+TGG + chr5_1:61741647-61741666 Msa0741950:CDS 55.0%
TACCACAACCACCTCCAGAG+TGG - chr5_1:61741664-61741683 None:intergenic 55.0%
GGATCATCATCACCCCCTTC+AGG + chr5_1:61741770-61741789 Msa0741950:CDS 55.0%
!! GGTGACGGAGTTGGAGTTGA+TGG - chr5_1:61741818-61741837 None:intergenic 55.0%
TAACTTCCACTGCCTGACGG+TGG - chr5_1:61741839-61741858 None:intergenic 55.0%
!! GGTGATGGGGTAGGAGTTGA+TGG - chr5_1:61741872-61741891 None:intergenic 55.0%
! ACCATCTGAGGGTGGTGATG+GGG - chr5_1:61741885-61741904 None:intergenic 55.0%
CACCATCTGAGGGTGGTGAT+GGG - chr5_1:61741886-61741905 None:intergenic 55.0%
!! TTTGGGGGAGTTGATGGGGT+TGG - chr5_1:61741923-61741942 None:intergenic 55.0%
TGTGATCCAACCCCATCACC+CGG + chr5_1:61741944-61741963 Msa0741950:CDS 55.0%
CTGTAACTTCCGTCACCACC+GGG - chr5_1:61741965-61741984 None:intergenic 55.0%
! ACCATCCGATGGTGGTGATG+GGG - chr5_1:61742008-61742027 None:intergenic 55.0%
! CACCATCCGATGGTGGTGAT+GGG - chr5_1:61742009-61742028 None:intergenic 55.0%
!! GGGGTTGGAGTTGATGGTGT+TGG - chr5_1:61742046-61742065 None:intergenic 55.0%
!! ACTACCTGATGGTGGTGACG+GGG - chr5_1:61742065-61742084 None:intergenic 55.0%
!! CACTACCTGATGGTGGTGAC+GGG - chr5_1:61742066-61742085 None:intergenic 55.0%
!! CCACTACCTGATGGTGGTGA+CGG - chr5_1:61742067-61742086 None:intergenic 55.0%
TGATGGGGTAGGAGTTGACG+GGG - chr5_1:61742104-61742123 None:intergenic 55.0%
! GTGATGGGGTAGGAGTTGAC+GGG - chr5_1:61742105-61742124 None:intergenic 55.0%
!! GGTGATGGGGTAGGAGTTGA+CGG - chr5_1:61741872-61741891 None:intergenic 55.0%
! ACCATCTGAGGGTGGTGATG+GGG - chr5_1:61741885-61741904 None:intergenic 55.0%
CACCATCTGAGGGTGGTGAT+GGG - chr5_1:61741886-61741905 None:intergenic 55.0%
GAACTTCCGCCACCATCTGA+GGG - chr5_1:61742130-61742149 None:intergenic 55.0%
AGAACTTCCGCCACCATCTG+AGG - chr5_1:61742131-61742150 None:intergenic 55.0%
TCTGATCCAACCCCATCACC+AGG + chr5_1:61742148-61742167 Msa0741950:CDS 55.0%
! TCCATCACCACCTGGTGATG+GGG - chr5_1:61742161-61742180 None:intergenic 55.0%
CTTCCATCACCACCTGGTGA+TGG - chr5_1:61742163-61742182 None:intergenic 55.0%
!! CCTGGAGGAGTTGATGGAGT+TGG - chr5_1:61742193-61742212 None:intergenic 55.0%
CCAACTCCATCAACTCCTCC+AGG + chr5_1:61742190-61742209 Msa0741950:CDS 55.0%
ACTCCATCAACTCCTCCAGG+AGG + chr5_1:61742193-61742212 Msa0741950:CDS 55.0%
TAACTTCCATCGCCTGAGGG+TGG - chr5_1:61742244-61742263 None:intergenic 55.0%
GTGTAACTTCCACCGGATGG+GGG - chr5_1:61742286-61742305 None:intergenic 55.0%
GGAGTGTAACTTCCACCGGA+TGG - chr5_1:61742289-61742308 None:intergenic 55.0%
!! GTTGGGGGTGTTGATGGAGT+TGG - chr5_1:61742310-61742329 None:intergenic 55.0%
!! TCGCTAGTTGGGGGTGTTGA+TGG - chr5_1:61742316-61742335 None:intergenic 55.0%
AGGGTGGACAGTCGCTAGTT+GGG - chr5_1:61742327-61742346 None:intergenic 55.0%
!! AGGGTGTTGTCGGGCTTGTA+GGG - chr5_1:61742354-61742373 None:intergenic 55.0%
!! TTGGGCTTGAGGGTGTTGTC+GGG - chr5_1:61742363-61742382 None:intergenic 55.0%
!! GTTGGGCTTGAGGGTGTTGT+CGG - chr5_1:61742364-61742383 None:intergenic 55.0%
ACACCATCAAACCCTCCCTC+AGG + chr5_1:61742391-61742410 Msa0741950:CDS 55.0%
TCTCCTGAGGGAGGGTTTGA+TGG - chr5_1:61742397-61742416 None:intergenic 55.0%
TCAAACCCTCCCTCAGGAGA+TGG + chr5_1:61742397-61742416 Msa0741950:CDS 55.0%
GGGCTTGTAGGATCTTGTGG+TGG - chr5_1:61742439-61742458 None:intergenic 55.0%
!! GAGGGTGTTGTTGGGCTTGT+AGG - chr5_1:61742451-61742470 None:intergenic 55.0%
!! GGAGGGTTTGATGGCGTTGT+TGG - chr5_1:61742478-61742497 None:intergenic 55.0%
ACGCCATCAAACCCTCCATC+AGG + chr5_1:61742481-61742500 Msa0741950:CDS 55.0%
CGCCATCAAACCCTCCATCA+GGG + chr5_1:61742482-61742501 Msa0741950:CDS 55.0%
GCCATCAAACCCTCCATCAG+GGG + chr5_1:61742483-61742502 Msa0741950:CDS 55.0%
CCATCAAACCCTCCATCAGG+GGG + chr5_1:61742484-61742503 Msa0741950:CDS 55.0%
GGGGTTATAGGGTCTGATGG+TGG - chr5_1:61742520-61742539 None:intergenic 55.0%
GTCGGGGTTATAGGGTCTGA+TGG - chr5_1:61742523-61742542 None:intergenic 55.0%
!! CCTCCTGATGGTGGGTTTGA+TGG - chr5_1:61742550-61742569 None:intergenic 55.0%
CCATCAAACCCACCATCAGG+AGG + chr5_1:61742547-61742566 Msa0741950:CDS 55.0%
AGTCGTAGCCTCCTGATGGT+GGG - chr5_1:61742558-61742577 None:intergenic 55.0%
CCTCCTGATGGAGGGTTTGA+TGG - chr5_1:61742613-61742632 None:intergenic 55.0%
CCATCAAACCCTCCATCAGG+AGG + chr5_1:61742484-61742503 Msa0741950:CDS 55.0%
AGTCGTAGCCTCCTGATGGA+GGG - chr5_1:61742621-61742640 None:intergenic 55.0%
GGGGTTATAGGGTCTGATGG+TGG - chr5_1:61742520-61742539 None:intergenic 55.0%
CCTCCTGATGGAGGGTTTGA+TGG - chr5_1:61742613-61742632 None:intergenic 55.0%
CCATCAAACCCTCCATCAGG+AGG + chr5_1:61742484-61742503 Msa0741950:CDS 55.0%
! GGGGTTATAGGGTCTTGTGG+TGG - chr5_1:61742712-61742731 None:intergenic 55.0%
ACACCATCAAACCCTCCGAC+AGG + chr5_1:61742736-61742755 Msa0741950:CDS 55.0%
GGGGTTAAAGGGTCTGTTGG+TGG - chr5_1:61742775-61742794 None:intergenic 55.0%
! GGGGTTATAGGGTCTTGTGG+TGG - chr5_1:61742712-61742731 None:intergenic 55.0%
CCTCCTGATGGAGGGTTTGA+TGG - chr5_1:61742613-61742632 None:intergenic 55.0%
CCATCAAACCCTCCATCAGG+AGG + chr5_1:61742484-61742503 Msa0741950:CDS 55.0%
! AATGGGGTGCCAGGATCGAT+CGG - chr5_1:61742961-61742980 None:intergenic 55.0%
TGGGGAAAGTGGGGGTCAAT+GGG - chr5_1:61742978-61742997 None:intergenic 55.0%
AAGGTGGTGTGGGGAAAGTG+GGG - chr5_1:61742987-61743006 None:intergenic 55.0%
GAAAGGTGGTGTGGGGAAAG+TGG - chr5_1:61742989-61743008 None:intergenic 55.0%
CAGGAAGGAAAGGTGGTGTG+GGG - chr5_1:61742996-61743015 None:intergenic 55.0%
GCAGGAAGGAAAGGTGGTGT+GGG - chr5_1:61742997-61743016 None:intergenic 55.0%
TGCAGGAAGGAAAGGTGGTG+TGG - chr5_1:61742998-61743017 None:intergenic 55.0%
GATGGTGCAGGAAGGAAAGG+TGG - chr5_1:61743003-61743022 None:intergenic 55.0%
GGAGATGGTGCAGGAAGGAA+AGG - chr5_1:61743006-61743025 None:intergenic 55.0%
TCTGGGGATTACTAGGCTGG+TGG + chr5_1:61743425-61743444 Msa0741950:CDS 55.0%
CTGGGGATTACTAGGCTGGT+GGG + chr5_1:61743426-61743445 Msa0741950:CDS 55.0%
TGGGGATTACTAGGCTGGTG+GGG + chr5_1:61743427-61743446 Msa0741950:CDS 55.0%
GTGCATAGTCTGCCAGGACT+CGG + chr5_1:61743472-61743491 Msa0741950:CDS 55.0%
CCTCCAGAGTGGTGAGATGG+TGG - chr5_1:61741653-61741672 None:intergenic 60.0%
CCACCATCTCACCACTCTGG+AGG + chr5_1:61741650-61741669 Msa0741950:CDS 60.0%
CCACCTCCAGAGTGGTGAGA+TGG - chr5_1:61741656-61741675 None:intergenic 60.0%
! CCATCTCACCACTCTGGAGG+TGG + chr5_1:61741653-61741672 Msa0741950:CDS 60.0%
! CACCACTCTGGAGGTGGTTG+TGG + chr5_1:61741659-61741678 Msa0741950:CDS 60.0%
GGAGGTGGTTGTGGTAGCAG+TGG + chr5_1:61741668-61741687 Msa0741950:CDS 60.0%
AGTGGCACTCCACCCTCTAG+TGG + chr5_1:61741686-61741705 Msa0741950:CDS 60.0%
GTGGCACTCCACCCTCTAGT+GGG + chr5_1:61741687-61741706 Msa0741950:CDS 60.0%
GAGGGTGAGGACCCACTAGA+GGG - chr5_1:61741701-61741720 None:intergenic 60.0%
AGAGGGTGAGGACCCACTAG+AGG - chr5_1:61741702-61741721 None:intergenic 60.0%
AGTGGGTCCTCACCCTCTCA+CGG + chr5_1:61741704-61741723 Msa0741950:CDS 60.0%
TCCTCACCCTCTCACGGTCA+CGG + chr5_1:61741710-61741729 Msa0741950:CDS 60.0%
CCATGACCGTGACCGTGAGA+GGG - chr5_1:61741719-61741738 None:intergenic 60.0%
ACCATGACCGTGACCGTGAG+AGG - chr5_1:61741720-61741739 None:intergenic 60.0%
CACGGTCACGGTCATGGTCA+TGG + chr5_1:61741722-61741741 Msa0741950:CDS 60.0%
TCATCACCCCCTTCAGGCAG+TGG + chr5_1:61741776-61741795 Msa0741950:CDS 60.0%
!! GGGGTAGGAGTTGATGGGGT+TGG - chr5_1:61741866-61741885 None:intergenic 60.0%
!! TCTGAGGGTGGTGATGGGGT+AGG - chr5_1:61741881-61741900 None:intergenic 60.0%
ACCCCATCACCACCCTCAGA+TGG + chr5_1:61741881-61741900 Msa0741950:CDS 60.0%
CCACCATCTGAGGGTGGTGA+TGG - chr5_1:61741887-61741906 None:intergenic 60.0%
CCATCACCACCCTCAGATGG+TGG + chr5_1:61741884-61741903 Msa0741950:CDS 60.0%
! TCACCACCCTCAGATGGTGG+TGG + chr5_1:61741887-61741906 Msa0741950:CDS 60.0%
CTTCCACCACCATCTGAGGG+TGG - chr5_1:61741893-61741912 None:intergenic 60.0%
TTCCGTCACCACCGGGTGAT+GGG - chr5_1:61741958-61741977 None:intergenic 60.0%
TGATGGGGTGGGAGTTGACG+GGG - chr5_1:61741993-61742012 None:intergenic 60.0%
! GTGATGGGGTGGGAGTTGAC+GGG - chr5_1:61741994-61742013 None:intergenic 60.0%
!! GGTGATGGGGTGGGAGTTGA+CGG - chr5_1:61741995-61742014 None:intergenic 60.0%
TCCCACCCCATCACCACCAT+CGG + chr5_1:61742000-61742019 Msa0741950:CDS 60.0%
!! TCCGATGGTGGTGATGGGGT+GGG - chr5_1:61742004-61742023 None:intergenic 60.0%
!! ATCCGATGGTGGTGATGGGG+TGG - chr5_1:61742005-61742024 None:intergenic 60.0%
ACCCCATCACCACCATCGGA+TGG + chr5_1:61742004-61742023 Msa0741950:CDS 60.0%
! CCACCATCCGATGGTGGTGA+TGG - chr5_1:61742010-61742029 None:intergenic 60.0%
CCATCACCACCATCGGATGG+TGG + chr5_1:61742007-61742026 Msa0741950:CDS 60.0%
! TCACCACCATCGGATGGTGG+TGG + chr5_1:61742010-61742029 Msa0741950:CDS 60.0%
CTTCCACCACCATCCGATGG+TGG - chr5_1:61742016-61742035 None:intergenic 60.0%
!! GGTGACGGGGTTGGAGTTGA+TGG - chr5_1:61742052-61742071 None:intergenic 60.0%
CCGTCACCACCATCAGGTAG+TGG + chr5_1:61742064-61742083 Msa0741950:CDS 60.0%
!! TCTGAGGGTGGTGATGGGGT+AGG - chr5_1:61741881-61741900 None:intergenic 60.0%
ACCCCATCACCACCCTCAGA+TGG + chr5_1:61741881-61741900 Msa0741950:CDS 60.0%
CCACCATCTGAGGGTGGTGA+TGG - chr5_1:61741887-61741906 None:intergenic 60.0%
CCATCACCACCCTCAGATGG+TGG + chr5_1:61741884-61741903 Msa0741950:CDS 60.0%
! TCACCACCCTCAGATGGTGG+CGG + chr5_1:61741887-61741906 Msa0741950:CDS 60.0%
GATCCAACCCCATCACCAGG+TGG + chr5_1:61742151-61742170 Msa0741950:CDS 60.0%
!! TCACCACCTGGTGATGGGGT+TGG - chr5_1:61742157-61742176 None:intergenic 60.0%
ACCCCATCACCAGGTGGTGA+TGG + chr5_1:61742157-61742176 Msa0741950:CDS 60.0%
CCACCTCCTGGAGGAGTTGA+TGG - chr5_1:61742199-61742218 None:intergenic 60.0%
CCATCAACTCCTCCAGGAGG+TGG + chr5_1:61742196-61742215 Msa0741950:CDS 60.0%
! ATCGCCTGAGGGTGGTGTTG+GGG - chr5_1:61742236-61742255 None:intergenic 60.0%
CATCGCCTGAGGGTGGTGTT+GGG - chr5_1:61742237-61742256 None:intergenic 60.0%
! GATGGGGGAGATGACGGTGT+TGG - chr5_1:61742271-61742290 None:intergenic 60.0%
ACACCGTCATCTCCCCCATC+CGG + chr5_1:61742271-61742290 Msa0741950:CDS 60.0%
GGTGGACAGTCGCTAGTTGG+GGG - chr5_1:61742325-61742344 None:intergenic 60.0%
GGGTGGACAGTCGCTAGTTG+GGG - chr5_1:61742326-61742345 None:intergenic 60.0%
GAGGGTGGACAGTCGCTAGT+TGG - chr5_1:61742328-61742347 None:intergenic 60.0%
GTCGGGCTTGTAGGGTCTGA+GGG - chr5_1:61742346-61742365 None:intergenic 60.0%
TGTCGGGCTTGTAGGGTCTG+AGG - chr5_1:61742347-61742366 None:intergenic 60.0%
!! GAGGGTGTTGTCGGGCTTGT+AGG - chr5_1:61742355-61742374 None:intergenic 60.0%
AACCCTCCCTCAGGAGATGG+AGG + chr5_1:61742400-61742419 Msa0741950:CDS 60.0%
ACCCTCCCTCAGGAGATGGA+GGG + chr5_1:61742401-61742420 Msa0741950:CDS 60.0%
ACCCTCCATCTCCTGAGGGA+GGG - chr5_1:61742405-61742424 None:intergenic 60.0%
TACCCTCCATCTCCTGAGGG+AGG - chr5_1:61742406-61742425 None:intergenic 60.0%
CCCCCTGATGGAGGGTTTGA+TGG - chr5_1:61742487-61742506 None:intergenic 60.0%
AGTCGTAGCCCCCTGATGGA+GGG - chr5_1:61742495-61742514 None:intergenic 60.0%
GAGTCGTAGCCTCCTGATGG+TGG - chr5_1:61742559-61742578 None:intergenic 60.0%
GGTGAGTCGTAGCCTCCTGA+TGG - chr5_1:61742562-61742581 None:intergenic 60.0%
GAGTCGTAGCCTCCTGATGG+AGG - chr5_1:61742559-61742578 None:intergenic 60.0%
GGTGAGTCGTAGCCTCCTGA+TGG - chr5_1:61742562-61742581 None:intergenic 60.0%
CCTCCTGTCGGAGGGTTTGA+TGG - chr5_1:61742742-61742761 None:intergenic 60.0%
CCATCAAACCCTCCGACAGG+AGG + chr5_1:61742739-61742758 Msa0741950:CDS 60.0%
AGTCGTAGCCTCCTGTCGGA+GGG - chr5_1:61742750-61742769 None:intergenic 60.0%
GGTGAGTCGTAGCCTCCTGT+CGG - chr5_1:61742754-61742773 None:intergenic 60.0%
! ATGGGGTGCCAGGATCGATC+GGG - chr5_1:61742960-61742979 None:intergenic 60.0%
GGGGAAAGTGGGGGTCAATG+GGG - chr5_1:61742977-61742996 None:intergenic 60.0%
GTGGGGAAAGTGGGGGTCAA+TGG - chr5_1:61742979-61742998 None:intergenic 60.0%
AGGTGGTGTGGGGAAAGTGG+GGG - chr5_1:61742986-61743005 None:intergenic 60.0%
CAGTGGGAGATGGTGCAGGA+AGG - chr5_1:61743011-61743030 None:intergenic 60.0%
CTTCCTGCACCATCTCCCAC+TGG + chr5_1:61743009-61743028 Msa0741950:intron 60.0%
GTACCAGTGGGAGATGGTGC+AGG - chr5_1:61743015-61743034 None:intergenic 60.0%
CTAGGCTGGTGGGGAACCTT+AGG + chr5_1:61743436-61743455 Msa0741950:CDS 60.0%
CTGAGACTTGCACCGAGTCC+TGG - chr5_1:61743487-61743506 None:intergenic 60.0%
GGTGAGGACCCACTAGAGGG+TGG - chr5_1:61741698-61741717 None:intergenic 65.0%
ACCGTGACCGTGAGAGGGTG+AGG - chr5_1:61741714-61741733 None:intergenic 65.0%
CCCTCTCACGGTCACGGTCA+TGG + chr5_1:61741716-61741735 Msa0741950:CDS 65.0%
!! CCTGACGGTGGTGACGGAGT+TGG - chr5_1:61741827-61741846 None:intergenic 65.0%
CCAACTCCGTCACCACCGTC+AGG + chr5_1:61741824-61741843 Msa0741950:CDS 65.0%
CCACTGCCTGACGGTGGTGA+CGG - chr5_1:61741833-61741852 None:intergenic 65.0%
GATCCAACCCCATCACCCGG+TGG + chr5_1:61741947-61741966 Msa0741950:CDS 65.0%
!! TCACCACCGGGTGATGGGGT+TGG - chr5_1:61741953-61741972 None:intergenic 65.0%
ACCCCATCACCCGGTGGTGA+CGG + chr5_1:61741953-61741972 Msa0741950:CDS 65.0%
TCCGTCACCACCGGGTGATG+GGG - chr5_1:61741957-61741976 None:intergenic 65.0%
CTTCCGTCACCACCGGGTGA+TGG - chr5_1:61741959-61741978 None:intergenic 65.0%
!! CCTGATGGTGGTGACGGGGT+TGG - chr5_1:61742061-61742080 None:intergenic 65.0%
CCAACCCCGTCACCACCATC+AGG + chr5_1:61742058-61742077 Msa0741950:CDS 65.0%
GGGGTAGGAGTTGACGGGGT+TGG - chr5_1:61742100-61742119 None:intergenic 65.0%
CTTCCGCCACCATCTGAGGG+TGG - chr5_1:61742127-61742146 None:intergenic 65.0%
! CCTGAGGGTGGTGTTGGGGA+TGG - chr5_1:61742232-61742251 None:intergenic 65.0%
CCATCCCCAACACCACCCTC+AGG + chr5_1:61742229-61742248 Msa0741950:CDS 65.0%
CCATCGCCTGAGGGTGGTGT+TGG - chr5_1:61742238-61742257 None:intergenic 65.0%
CCAACACCACCCTCAGGCGA+TGG + chr5_1:61742235-61742254 Msa0741950:CDS 65.0%
CCACCGGATGGGGGAGATGA+CGG - chr5_1:61742277-61742296 None:intergenic 65.0%
GGGCTTGTAGGGTCTGAGGG+TGG - chr5_1:61742343-61742362 None:intergenic 65.0%
GAGTCGTAGCCCCCTGATGG+AGG - chr5_1:61742496-61742515 None:intergenic 65.0%
GGTGAGTCGTAGCCCCCTGA+TGG - chr5_1:61742499-61742518 None:intergenic 65.0%
GAGTCGTAGCCTCCTGTCGG+AGG - chr5_1:61742751-61742770 None:intergenic 65.0%
! TGGGGTGCCAGGATCGATCG+GGG - chr5_1:61742959-61742978 None:intergenic 65.0%
CCGTCACCACCGTCAGGCAG+TGG + chr5_1:61741830-61741849 Msa0741950:CDS 70.0%
GGGGTGGGAGTTGACGGGGT+TGG - chr5_1:61741989-61742008 None:intergenic 70.0%
CCGTCATCTCCCCCATCCGG+TGG + chr5_1:61742274-61742293 Msa0741950:CDS 70.0%
GGTAGCCCCCCGATCGATCC+TGG + chr5_1:61742949-61742968 Msa0741950:intron 70.0%
GGGTGCCAGGATCGATCGGG+GGG - chr5_1:61742957-61742976 None:intergenic 70.0%
! GGGGTGCCAGGATCGATCGG+GGG - chr5_1:61742958-61742977 None:intergenic 70.0%
! GTGGGGGTCAATGGGGTGCC+AGG - chr5_1:61742970-61742989 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 61741177 61743729 61741177 ID=Msa0741950;Name=Msa0741950
chr5_1 mRNA 61741177 61743729 61741177 ID=Msa0741950-mRNA-1;Parent=Msa0741950;Name=Msa0741950-mRNA-1;_AED=0.37;_eAED=0.37;_QI=68|0.5|0.33|0.66|1|1|3|0|583
chr5_1 exon 61741177 61741386 61741177 ID=Msa0741950-mRNA-1:exon:17968;Parent=Msa0741950-mRNA-1
chr5_1 exon 61741639 61742917 61741639 ID=Msa0741950-mRNA-1:exon:17969;Parent=Msa0741950-mRNA-1
chr5_1 exon 61743399 61743729 61743399 ID=Msa0741950-mRNA-1:exon:17970;Parent=Msa0741950-mRNA-1
chr5_1 five_prime_UTR 61741177 61741244 61741177 ID=Msa0741950-mRNA-1:five_prime_utr;Parent=Msa0741950-mRNA-1
chr5_1 CDS 61741245 61741386 61741245 ID=Msa0741950-mRNA-1:cds;Parent=Msa0741950-mRNA-1
chr5_1 CDS 61741639 61742917 61741639 ID=Msa0741950-mRNA-1:cds;Parent=Msa0741950-mRNA-1
chr5_1 CDS 61743399 61743729 61743399 ID=Msa0741950-mRNA-1:cds;Parent=Msa0741950-mRNA-1
Gene Sequence

>Msa0741950

ATGGAGAAGAAAAGAAGCAACAATGCTTCTCTTACCATGTTCACAATGCTGGTTGCATTGGTTTCTCAAAACCTTGTTATTGTTCCTGTAATGGCCAACACTCAAGCAGGAAGTTCTCCCTCAGATTTATCTACTGAACTATGTTCACATAGTCCACCATCTCACCACTCTGGAGGTGGTTGTGGTAGCAGTGGCACTCCACCCTCTAGTGGGTCCTCACCCTCTCACGGTCACGGTCATGGTCATGGTCATAGTCATCATGGCCATGGTCATGGATCATCATCACCCCCTTCAGGCAGTGGAAGTTACAATCCAACTCCATCAACTCCAACTCCGTCACCACCGTCAGGCAGTGGAAGTTACAGTCCAACCCCATCAACTCCTACCCCATCACCACCCTCAGATGGTGGTGGAAGTTCTGATCCAACCCCATCAACTCCCCCAAATTGTGATCCAACCCCATCACCCGGTGGTGACGGAAGTTACAGTCCAACCCCGTCAACTCCCACCCCATCACCACCATCGGATGGTGGTGGAAGTTACAATCCAACACCATCAACTCCAACCCCGTCACCACCATCAGGTAGTGGAAGTTACACTCCAACCCCGTCAACTCCTACCCCATCACCACCCTCAGATGGTGGCGGAAGTTCTGATCCAACCCCATCACCAGGTGGTGATGGAAGTTACACTCCAACTCCATCAACTCCTCCAGGAGGTGGAAGTTATGATCCATCCCCAACACCACCCTCAGGCGATGGAAGTTATAATCCAACACCGTCATCTCCCCCATCCGGTGGAAGTTACACTCCAACTCCATCAACACCCCCAACTAGCGACTGTCCACCCTCAGACCCTACAAGCCCGACAACACCCTCAAGCCCAACACCATCAACACCATCAAACCCTCCCTCAGGAGATGGAGGGTACTATAACTCACCACCACAAGATCCTACAAGCCCAACAACACCCTCAACTCCAACAACGCCATCAAACCCTCCATCAGGGGGCTACGACTCACCACCATCAGACCCTATAACCCCGACAACACCATCAAACCCACCATCAGGAGGCTACGACTCACCACCATCAGACCCTATAACTCCAACAACACCATCAAACCCTCCATCAGGAGGCTACGACTCACCACCATCAGACCCTATAACCCCAACAACACCATCAAACCCTCCATCAGGAGGGTACTATAACTCACCACCACAAGACCCTATAACCCCTACAACACCATCAAACCCTCCGACAGGAGGCTACGACTCACCACCAACAGACCCTTTAACCCCAACAACACCATCAAATCCTCCATCAGGAGGGTACTACAACTCACCACCACAAGACCCTATAACCCCAACAACACCATCAAACCCTTTAACCCCAACAACACCATCAAACCCTCCATCAGGAGGCTACTGGAATACTCACCCACAACTCATCTGGGGATTACTAGGCTGGTGGGGAACCTTAGGCAATGTTTTTGGTGTGCATAGTCTGCCAGGACTCGGTGCAAGTCTCAGCATTCCACAAGCACTTTCCAACACAAGAACTGATGCGCTCGGAGCACTTTACAGAGAAGGTGCAGCTTCTTATCTTAACTCCTTAGTGAACAACAAGTTCCCTTACACAACTGATCAAGTCAGAGACAGATTTGTAGCATCACTCAGCTCAAATAAGGCTGCAGCAACACAAGCACATCTTTTCCAGATGGCCAATGAGGGAAAAATTAAGCCTAGAGCATGA
Protein sequence

>Msa0741950

MEKKRSNNASLTMFTMLVALVSQNLVIVPVMANTQAGSSPSDLSTELCSHSPPSHHSGGGCGSSGTPPSSGSSPSHGHGHGHGHSHHGHGHGSSSPPSGSGSYNPTPSTPTPSPPSGSGSYSPTPSTPTPSPPSDGGGSSDPTPSTPPNCDPTPSPGGDGSYSPTPSTPTPSPPSDGGGSYNPTPSTPTPSPPSGSGSYTPTPSTPTPSPPSDGGGSSDPTPSPGGDGSYTPTPSTPPGGGSYDPSPTPPSGDGSYNPTPSSPPSGGSYTPTPSTPPTSDCPPSDPTSPTTPSSPTPSTPSNPPSGDGGYYNSPPQDPTSPTTPSTPTTPSNPPSGGYDSPPSDPITPTTPSNPPSGGYDSPPSDPITPTTPSNPPSGGYDSPPSDPITPTTPSNPPSGGYYNSPPQDPITPTTPSNPPTGGYDSPPTDPLTPTTPSNPPSGGYYNSPPQDPITPTTPSNPLTPTTPSNPPSGGYWNTHPQLIWGLLGWWGTLGNVFGVHSLPGLGASLSIPQALSNTRTDALGALYREGAASYLNSLVNNKFPYTTDQVRDRFVASLSSNKAAATQAHLFQMANEGKIKPRA*