AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0862150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0862150 MtrunA17_Chr5g0443411 86.730 633 34 6 1 631 1 585 0.0 664
Msa0862150 MtrunA17_Chr3g0096661 63.077 195 60 2 446 630 137 329 2.31e-61 207
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0862150 AT2G42840.1 58.289 187 60 5 449 631 134 306 5.65e-53 184

Find 344 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTGTTGTTGGGGTTAT+AGG 0.118962 5_4:-61750484 None:intergenic
GATGGGGTTGGATCACAATT+TGG 0.173921 5_4:-61749833 None:intergenic
GATGGTGTTGTTGGGGTTAT+AGG 0.187860 5_4:-61750421 None:intergenic
GATGGTGTTGTTGGGGTTAT+AGG 0.187860 5_4:-61750547 None:intergenic
GATGGTGTTGTTGGGGTTAT+AGG 0.187860 5_4:-61750742 None:intergenic
GGTGATGGGGTGGGAGTTGA+TGG 0.188322 5_4:-61749887 None:intergenic
GATGGTGTTGTCGGGGTTAA+AGG 0.196171 5_4:-61750769 None:intergenic
GGTGATGGGGTTGGAGTTGA+TGG 0.228415 5_4:-61749944 None:intergenic
GATGGTGTTGTAGGGGTTAT+AGG 0.231476 5_4:-61750613 None:intergenic
GATGGTGTTGTTGGGGTTAA+AGG 0.234509 5_4:-61750676 None:intergenic
GTGGGTTTGATGGTGTTGTT+GGG 0.240176 5_4:-61750429 None:intergenic
GAGGGTTTGATGGTGTTGTT+GGG 0.242841 5_4:-61750555 None:intergenic
GCTTGAGTCTTGGCCATTAC+AGG 0.246734 5_4:-61749200 None:intergenic
GAGGGTTTGGTGGTGTTGTT+GGG 0.247181 5_4:-61750492 None:intergenic
GGAGGGTTTGGTGGTGTTGT+TGG 0.248996 5_4:-61750493 None:intergenic
GAGGGTGTTGTCGGGCTTGT+AGG 0.249927 5_4:-61750244 None:intergenic
GGTGATGGGGTAGGAGTTGA+TGG 0.253366 5_4:-61749764 None:intergenic
GTGGTGTTGTTGGGGTTATA+GGG 0.262325 5_4:-61750483 None:intergenic
GGAGGGTTTGATGGTGTTGT+TGG 0.269445 5_4:-61750556 None:intergenic
GGTGGGTTTGATGGTGTTGT+TGG 0.274156 5_4:-61750430 None:intergenic
ATGGGGTTGGATCACAATTT+GGG 0.282770 5_4:-61749832 None:intergenic
GGGAGGATTTGGAGGTGGTT+TGG 0.284865 5_4:-61749070 None:intergenic
GAGGGTTTGATGGTGTTGTC+GGG 0.290364 5_4:-61750777 None:intergenic
GAAAGGTGGTGTGGGGAAAG+TGG 0.291003 5_4:-61750878 None:intergenic
AAGGGTTTGATGGTGTTGTT+GGG 0.291609 5_4:-61750750 None:intergenic
GGAGGGTTTGATGGGGTTGT+TGG 0.292502 5_4:-61750367 None:intergenic
GGAGGGTTTGATGGTGTTGT+AGG 0.296300 5_4:-61750622 None:intergenic
AGAAAAGGAAAGGGAGGATT+TGG 0.297468 5_4:-61749081 None:intergenic
CCTCCTGATGGTGGGTTTGA+TGG 0.298529 5_4:-61750439 None:intergenic
TGTTAATTAGCATTTATATA+TGG 0.304298 5_4:+61751774 Msa0862150:three_prime_UTR
GTTGGAGTTGAGGGTGTTGT+TGG 0.307327 5_4:-61750349 None:intergenic
ATGGTGTTGTTGGGGTTATA+GGG 0.309013 5_4:-61750420 None:intergenic
ATGGTGTTGTTGGGGTTATA+GGG 0.309013 5_4:-61750546 None:intergenic
ATGGTGTTGTTGGGGTTATA+GGG 0.309013 5_4:-61750741 None:intergenic
GAGGATTTGATGGTGTTGTT+GGG 0.311465 5_4:-61750684 None:intergenic
AAAGGGTTTGATGGTGTTGT+TGG 0.314241 5_4:-61750751 None:intergenic
ATGGTGTTGTTGGGGTTAAA+GGG 0.314440 5_4:-61750675 None:intergenic
TACAACTCACCACCAACTTA+TGG 0.317432 5_4:+61750814 Msa0862150:CDS
AGAGCATGATCTAATTAGTT+TGG 0.318391 5_4:+61751618 Msa0862150:exon
GTTGGGGTTATAGGGTTTGA+TGG 0.319935 5_4:-61750475 None:intergenic
CACCACCTGGTGATGGGGTT+GGG 0.324613 5_4:-61750048 None:intergenic
GTCGGGGTTAAAGGGTTTGA+TGG 0.325915 5_4:-61750760 None:intergenic
CCTCCTGATGGAGGGTTTGA+TGG 0.330128 5_4:-61750787 None:intergenic
GGAGGGTTTGATGGTGTTGT+CGG 0.332624 5_4:-61750778 None:intergenic
CCTCCTGACGGAGGGTTTGA+TGG 0.338359 5_4:-61750631 None:intergenic
CAACTCATCTGGGGATTACT+AGG 0.339213 5_4:+61751315 Msa0862150:CDS
GGAGGATTTGATGGTGTTGT+TGG 0.347029 5_4:-61750685 None:intergenic
AGCATCACTCAGCTCAAATA+AGG 0.347612 5_4:+61751539 Msa0862150:CDS
GAGGGTGGACAATCGCTAGC+TGG 0.349675 5_4:-61750217 None:intergenic
GATGGGGTTGTTGGAGTTGA+GGG 0.350078 5_4:-61750358 None:intergenic
GGTGATGGGGTAGGAGTTGA+CGG 0.353452 5_4:-61749998 None:intergenic
GGAACCTTAGGCAATGCTTT+TGG 0.354127 5_4:+61751345 Msa0862150:CDS
CCACCTCCTGGAGGAGTTGA+TGG 0.356567 5_4:-61750091 None:intergenic
CATCGCCTGAGGGTGGTGTT+GGG 0.358547 5_4:-61750129 None:intergenic
GAGGGTGTTGTTGGGCTTGT+AGG 0.360889 5_4:-61750340 None:intergenic
CCTTGTTATTGTTCCTGTAA+TGG 0.362368 5_4:+61749187 Msa0862150:CDS
GTTGGGTCTGAGGGTGTTGT+CGG 0.365243 5_4:-61750253 None:intergenic
ATGGTGTTGTCGGGGTTAAA+GGG 0.366078 5_4:-61750768 None:intergenic
CCTCCTGATGGAGGGTTTGA+TGG 0.367273 5_4:-61750565 None:intergenic
ATGGTGTTGTAGGGGTTATA+GGG 0.369231 5_4:-61750612 None:intergenic
GGGGTTGGAGTTGATGGTGT+TGG 0.372764 5_4:-61749938 None:intergenic
TGATGGGGTGGGAGTTGATG+GGG 0.373502 5_4:-61749885 None:intergenic
CTTCCACCAGTGGGTGGTGA+TGG 0.373634 5_4:-61750169 None:intergenic
AGCTTCTTATCTTAACTCCT+TGG 0.380146 5_4:+61751467 Msa0862150:CDS
TGATGGGGTTGTTGGAGTTG+AGG 0.383119 5_4:-61750359 None:intergenic
CCTCCTGATGGAGGATTTGA+TGG 0.388029 5_4:-61750694 None:intergenic
ATACTCACCCACAACTCATC+TGG 0.388415 5_4:+61751304 Msa0862150:CDS
ATGGGGTGCCAGGATCGATC+GGG 0.391054 5_4:-61750849 None:intergenic
TGTGTTAATTTATCCTATGA+TGG 0.395984 5_4:+61751728 Msa0862150:three_prime_UTR
CCATCGCCTGAGGGTGGTGT+TGG 0.396249 5_4:-61750130 None:intergenic
ATTAACTTTATTCAAAACTT+AGG 0.399802 5_4:-61751799 None:intergenic
GTGATGGGGTGGGAGTTGAT+GGG 0.399805 5_4:-61749886 None:intergenic
CCACCATCTGAGGGTGGTGA+TGG 0.399986 5_4:-61749779 None:intergenic
AAGGTGGTGTGGGGAAAGTG+GGG 0.400789 5_4:-61750876 None:intergenic
CCACCATCTGAGGGTGGTGA+TGG 0.401009 5_4:-61750013 None:intergenic
CACTACCTGATGGTGGTGAT+GGG 0.401118 5_4:-61749958 None:intergenic
AAAGGTGGTGTGGGGAAAGT+GGG 0.402261 5_4:-61750877 None:intergenic
CCTCCTGAGTGGTGAGGTGG+TGG 0.403915 5_4:-61749521 None:intergenic
GAGGGTTTGATGGTGTTGTA+GGG 0.404010 5_4:-61750621 None:intergenic
CCCCTGATGGAGGGTTTGAT+GGG 0.407488 5_4:-61750375 None:intergenic
GGAGGGCTTGACGGTGTTGA+TGG 0.408633 5_4:-61750277 None:intergenic
TTCCACCAGTGGGTGGTGAT+GGG 0.410965 5_4:-61750168 None:intergenic
TTCCGTCACCACCGGGTGAT+GGG 0.411470 5_4:-61749850 None:intergenic
TCTTACCATGTTCACAATGC+TGG 0.414379 5_4:+61749145 Msa0862150:CDS
TCACCACCTGGTGATGGGGT+TGG 0.415214 5_4:-61750049 None:intergenic
GAAGTCTTAAATATAATATA+CGG 0.416577 5_4:-61751669 None:intergenic
AGGGTGGACAATCGCTAGCT+GGG 0.418253 5_4:-61750216 None:intergenic
CATAGTTGCTTTGAGAGAAA+AGG 0.419458 5_4:-61749096 None:intergenic
TCTCCTGAGGGAGGGCTTGA+CGG 0.420711 5_4:-61750286 None:intergenic
GTTGGGGTTAAAGGGTCTGT+TGG 0.424256 5_4:-61750667 None:intergenic
CTGACTTGATCAGTTGTGTA+AGG 0.425458 5_4:-61751504 None:intergenic
CCACCATCCGATGGTGGTGA+TGG 0.425647 5_4:-61749902 None:intergenic
CTTGACGGTGTTGATGGTGT+TGG 0.426736 5_4:-61750271 None:intergenic
CTAGGCTGGTGGGGAACCTT+AGG 0.427247 5_4:+61751333 Msa0862150:CDS
GGGGTGCCAGGATCGATCGG+GGG 0.428278 5_4:-61750847 None:intergenic
TGGGGTGGGAGTTGATGGGG+TGG 0.429625 5_4:-61749882 None:intergenic
TTGACGGTGTTGATGGTGTT+GGG 0.430570 5_4:-61750270 None:intergenic
ACCCCATCAAACCCTCCATC+AGG 0.431165 5_4:+61750373 Msa0862150:CDS
GGGGTAGGAGTTGATGGGGT+TGG 0.431600 5_4:-61749758 None:intergenic
GGGGTTAAAGGGTCTGTTGG+TGG 0.432533 5_4:-61750664 None:intergenic
TTGGAGTTGAGGGTGTTGTT+GGG 0.432590 5_4:-61750348 None:intergenic
TTGGGTCTGAGGGTGTTGTC+GGG 0.433870 5_4:-61750252 None:intergenic
CTGAGACTTGCACCGAGTCC+TGG 0.434073 5_4:-61751381 None:intergenic
CCACTACCTGATGGTGGTGA+TGG 0.438808 5_4:-61749959 None:intergenic
AATGGGGTGCCAGGATCGAT+CGG 0.441759 5_4:-61750850 None:intergenic
AAAGGAAAGGGAGGATTTGG+AGG 0.443542 5_4:-61749078 None:intergenic
CCTGAGGGTGGTGTTGGGGA+TGG 0.448406 5_4:-61750124 None:intergenic
TAGCCTCCTGATGGAGGGTT+TGG 0.449051 5_4:-61750505 None:intergenic
TGGGGTGCCAGGATCGATCG+GGG 0.452157 5_4:-61750848 None:intergenic
CCAGTGGGTGGTGATGGGGT+TGG 0.455103 5_4:-61750163 None:intergenic
GGAGATGGTGCAGGAAGGAA+AGG 0.457013 5_4:-61750895 None:intergenic
GGATCATAACTTCCACCTCC+TGG 0.463129 5_4:-61750103 None:intergenic
CACCATCTGAGGGTGGTGAT+GGG 0.463896 5_4:-61750012 None:intergenic
GTGATGGGGTAGGAGTTGAT+GGG 0.464200 5_4:-61749763 None:intergenic
GGTGACGGAGTTGGAGTTGA+TGG 0.464383 5_4:-61749710 None:intergenic
GCAGGAAGGAAAGGTGGTGT+GGG 0.464521 5_4:-61750886 None:intergenic
CTTCCGTCACCACCGGGTGA+TGG 0.465953 5_4:-61749851 None:intergenic
TTCCATCACCACCTGGTGAT+GGG 0.467491 5_4:-61750054 None:intergenic
TACTCACCCACAACTCATCT+GGG 0.467667 5_4:+61751305 Msa0862150:CDS
CACCATCCGATGGTGGTGAT+GGG 0.468580 5_4:-61749901 None:intergenic
GTTGGGGTTATAGGGTCTGA+TGG 0.469463 5_4:-61750412 None:intergenic
GTTGGGGTTATAGGGTCTGA+TGG 0.469463 5_4:-61750538 None:intergenic
CCTCCTGATGGAGGGTTTGG+TGG 0.470358 5_4:-61750502 None:intergenic
AGGTGGTGTGGGGAAAGTGG+GGG 0.470458 5_4:-61750875 None:intergenic
GGGTGCCAGGATCGATCGGG+GGG 0.471002 5_4:-61750846 None:intergenic
CAGTGCACTGAATCCATCAT+AGG 0.475865 5_4:-61751741 None:intergenic
AGAACTTCCTGCTTGAGTCT+TGG 0.476407 5_4:-61749210 None:intergenic
AGTGGCACTCCACCCTCTAG+TGG 0.478705 5_4:+61749581 Msa0862150:CDS
TTTGGTGTGCATAGTCTGCC+AGG 0.478995 5_4:+61751363 Msa0862150:CDS
GTTCACAATGCTGGTTGCAT+TGG 0.481392 5_4:+61749154 Msa0862150:CDS
TGCTTTGAGAGAAAAGGAAA+GGG 0.482585 5_4:-61749090 None:intergenic
GGAGTTGGAGTTGATGGAGT+TGG 0.483323 5_4:-61749704 None:intergenic
ATCCGATGGTGGTGATGGGG+TGG 0.484247 5_4:-61749897 None:intergenic
AGGATTTGATGGTGTTGTTG+GGG 0.486806 5_4:-61750683 None:intergenic
AGGGTGTTGTCGGGCTTGTA+GGG 0.488489 5_4:-61750243 None:intergenic
TCAAGCCCTCCCTCAGGAGA+TGG 0.493225 5_4:+61750289 Msa0862150:CDS
TCACCACCGGGTGATGGGGT+TGG 0.497318 5_4:-61749845 None:intergenic
ACCCCATCACCCGGTGGTGA+CGG 0.497936 5_4:+61749848 Msa0862150:CDS
CACCACTCAGGAGGTGGCTG+TGG 0.499520 5_4:+61749530 Msa0862150:CDS
ACCGTGACCGTGAGAGGGTG+AGG 0.499821 5_4:-61749606 None:intergenic
GTTGGGGTTATAGGGTCTTG+TGG 0.501820 5_4:-61750733 None:intergenic
TCCTCACCCTCTCACGGTCA+CGG 0.503431 5_4:+61749605 Msa0862150:CDS
ACTGTAACTTCCGTCACCAC+CGG 0.504552 5_4:-61749858 None:intergenic
TGGAGAAGTGAGTGAAGAGT+GGG 0.505317 5_4:-61749050 None:intergenic
ACCCCATCACCAGGTGGTGA+TGG 0.505748 5_4:+61750052 Msa0862150:CDS
CCTGATGGTGGTGATGGGGT+TGG 0.507845 5_4:-61749953 None:intergenic
CCATCAACTCCTCCAGGAGG+TGG 0.507930 5_4:+61750091 Msa0862150:CDS
ACACCATCAAACCCACCATC+AGG 0.508402 5_4:+61750436 Msa0862150:CDS
ACTCCACCCTCTAGTGGCAG+TGG 0.510232 5_4:+61749563 Msa0862150:CDS
TTGCTTTGAGAGAAAAGGAA+AGG 0.510249 5_4:-61749091 None:intergenic
GGGGTAGGAGTTGACGGGGT+CGG 0.510282 5_4:-61749992 None:intergenic
GGGGTTATAGGGTTTGATGG+TGG 0.511028 5_4:-61750472 None:intergenic
CTGGGGATTACTAGGCTGGT+GGG 0.511530 5_4:+61751323 Msa0862150:CDS
AGGGTTTGGTGGTGTTGTTG+GGG 0.512295 5_4:-61750491 None:intergenic
GTTGATGGTGTTGGGTCTGA+GGG 0.512538 5_4:-61750262 None:intergenic
TGTTGATGGTGTTGGGTCTG+AGG 0.513159 5_4:-61750263 None:intergenic
CCATCCCCAACACCACCCTC+AGG 0.514434 5_4:+61750124 Msa0862150:CDS
TGGGTTTGATGGTGTTGTTG+GGG 0.514820 5_4:-61750428 None:intergenic
AGGGTTTGATGGTGTTGTTG+GGG 0.514820 5_4:-61750554 None:intergenic
TCATCTGGGGATTACTAGGC+TGG 0.515340 5_4:+61751319 Msa0862150:CDS
GGGCTACCACTTCCATAAGT+TGG 0.515629 5_4:-61750826 None:intergenic
GTGATGGGGTAGGAGTTGAC+GGG 0.516936 5_4:-61749997 None:intergenic
CACCATCTGAGGGTGGTGAT+GGG 0.517634 5_4:-61749778 None:intergenic
TGCAACCAGCATTGTGAACA+TGG 0.518407 5_4:-61749150 None:intergenic
TTGTAGTACCCTCCTGATGG+AGG 0.521570 5_4:-61750796 None:intergenic
GTACCAGTGGGAGATGGTGC+AGG 0.522929 5_4:-61750904 None:intergenic
CCACTGCCTGACGGTGGTGA+CGG 0.525331 5_4:-61749725 None:intergenic
TGTAACTTCCACTGCCTGAA+GGG 0.525487 5_4:-61749679 None:intergenic
AGGGTTTGATGGTGTTGTTG+GGG 0.525570 5_4:-61750749 None:intergenic
GGAAAGGGAGGATTTGGAGG+TGG 0.526743 5_4:-61749075 None:intergenic
CCAACCCCATCACCACCATC+AGG 0.526836 5_4:+61749953 Msa0862150:CDS
CTTCCATCACCACCTGGTGA+TGG 0.528472 5_4:-61750055 None:intergenic
AGGGTTTGATGGTGTTGTAG+GGG 0.529064 5_4:-61750620 None:intergenic
GTCGGGCTTGTAGGGTCTGA+GGG 0.530144 5_4:-61750235 None:intergenic
TTTGAGAGAAAAGGAAAGGG+AGG 0.531290 5_4:-61749087 None:intergenic
TCCACCAGTGGGTGGTGATG+GGG 0.531406 5_4:-61750167 None:intergenic
CCACCTCACCACTCAGGAGG+TGG 0.531951 5_4:+61749524 Msa0862150:CDS
TCCGATGGTGGTGATGGGGT+GGG 0.531969 5_4:-61749896 None:intergenic
GTTGGGCTTGTAGGATCTTG+TGG 0.533149 5_4:-61750331 None:intergenic
CTTCCTGCACCATCTCCCAC+TGG 0.533310 5_4:+61750901 Msa0862150:CDS
CCTGGAGGAGTTGATGGAGT+TGG 0.533764 5_4:-61750085 None:intergenic
ACACCACCAAACCCTCCATC+AGG 0.533807 5_4:+61750499 Msa0862150:CDS
ACACCATCAAACCCTCCATC+AGG 0.533807 5_4:+61750562 Msa0862150:CDS
ACACCATCAAACCCTCCATC+AGG 0.533807 5_4:+61750784 Msa0862150:CDS
GGGGTGGGAGTTGATGGGGT+GGG 0.535232 5_4:-61749881 None:intergenic
CCGTCACCACCGTCAGGCAG+TGG 0.535744 5_4:+61749725 Msa0862150:CDS
ACCCTCCATCTCCTGAGGGA+GGG 0.535753 5_4:-61750294 None:intergenic
TGCAGGAAGGAAAGGTGGTG+TGG 0.536405 5_4:-61750887 None:intergenic
GAGCGCATCAGTTCTTGTGT+TGG 0.536546 5_4:-61751421 None:intergenic
CACGGTCACGGTCATGGTCA+TGG 0.538873 5_4:+61749617 Msa0862150:CDS
TTGGAGAAGTGAGTGAAGAG+TGG 0.539325 5_4:-61749051 None:intergenic
ACACCATCAAATCCTCCATC+AGG 0.539376 5_4:+61750691 Msa0862150:CDS
GTGCATAGTCTGCCAGGACT+CGG 0.540042 5_4:+61751369 Msa0862150:CDS
GTGGCACTCCACCCTCTAGT+GGG 0.541059 5_4:+61749582 Msa0862150:CDS
GATGGTGCAGGAAGGAAAGG+TGG 0.541187 5_4:-61750892 None:intergenic
TCACCACCATCGGATGGTGG+TGG 0.541520 5_4:+61749905 Msa0862150:CDS
GAGTCGTAGCCTCCTGATGG+AGG 0.541984 5_4:-61750511 None:intergenic
GTAATCCCCAGATGAGTTGT+GGG 0.542041 5_4:-61751311 None:intergenic
AGAACTTCCGCCACCATCTG+AGG 0.542350 5_4:-61750023 None:intergenic
CCCTCTCACGGTCACGGTCA+TGG 0.542420 5_4:+61749611 Msa0862150:CDS
TTGTAACTTCCACTGCCTGA+AGG 0.542724 5_4:-61749680 None:intergenic
GGTCATGGTCATAGTCATCA+TGG 0.543471 5_4:+61749632 Msa0862150:CDS
CCCCATCAAACCCTCCATCA+GGG 0.543671 5_4:+61750374 Msa0862150:CDS
CCAACTCCGTCACCACCGTC+AGG 0.546027 5_4:+61749719 Msa0862150:CDS
TCTGGGGATTACTAGGCTGG+TGG 0.546406 5_4:+61751322 Msa0862150:CDS
ACACCATCAAACCCTCCGTC+AGG 0.546447 5_4:+61750628 Msa0862150:CDS
GGGGTTATAGGGTCTGATGG+TGG 0.547623 5_4:-61750409 None:intergenic
GGGGTTATAGGGTCTGATGG+TGG 0.547623 5_4:-61750535 None:intergenic
CCAACTCCATCAACTCCTCC+AGG 0.548752 5_4:+61750085 Msa0862150:CDS
TCCCACCCCATCACCACCAT+CGG 0.549269 5_4:+61749895 Msa0862150:CDS
ATCGCCTGAGGGTGGTGTTG+GGG 0.552008 5_4:-61750128 None:intergenic
TGTCGGGCTTGTAGGGTCTG+AGG 0.552169 5_4:-61750236 None:intergenic
TGTAGTACCCTCCTGATGGA+GGG 0.552185 5_4:-61750795 None:intergenic
GGAGGTGGCTGTGGTAGCAG+TGG 0.553829 5_4:+61749539 Msa0862150:CDS
AGTCATCATGGCCATGGTCA+TGG 0.554015 5_4:+61749644 Msa0862150:CDS
CCAACACCACCCTCAGGCGA+TGG 0.554158 5_4:+61750130 Msa0862150:CDS
TCTGAGGGTGGTGATGGGGT+AGG 0.554921 5_4:-61749773 None:intergenic
TCTGAGGGTGGTGATGGGGT+AGG 0.554921 5_4:-61750007 None:intergenic
AGTAATCCCCAGATGAGTTG+TGG 0.557092 5_4:-61751312 None:intergenic
GGGGTTATAGGGTCTTGTGG+TGG 0.562112 5_4:-61750730 None:intergenic
CTCGGAGCACTTTACAGAGA+AGG 0.562112 5_4:+61751441 Msa0862150:CDS
CTGTAACTTCCGTCACCACC+GGG 0.562180 5_4:-61749857 None:intergenic
GGGTGGACAATCGCTAGCTG+GGG 0.563217 5_4:-61750215 None:intergenic
TCACCACCAACTTATGGAAG+TGG 0.565348 5_4:+61750820 Msa0862150:CDS
TCCGTCACCACCGGGTGATG+GGG 0.566159 5_4:-61749849 None:intergenic
TGGAGTGCCACTGCCACTAG+AGG 0.566323 5_4:-61749570 None:intergenic
GGAGTGCCACTGCCACTAGA+GGG 0.566518 5_4:-61749569 None:intergenic
GAGTTGTAGTACCCTCCTGA+TGG 0.566528 5_4:-61750706 None:intergenic
GAGTTGTAGTACCCTCCTGA+TGG 0.566528 5_4:-61750799 None:intergenic
CCCTGATGGAGGGTTTGATG+GGG 0.567174 5_4:-61750374 None:intergenic
TCCATCACCACCTGGTGATG+GGG 0.568364 5_4:-61750053 None:intergenic
GAGTCGTAGCCTCCTGATGG+TGG 0.568633 5_4:-61750448 None:intergenic
CCTGACGGTGGTGACGGAGT+TGG 0.568744 5_4:-61749719 None:intergenic
ACACCGTCAAGCCCTCCCTC+AGG 0.569313 5_4:+61750283 Msa0862150:CDS
GTAGGGGTTATAGGGTCTTG+TGG 0.570635 5_4:-61750604 None:intergenic
GGTGAGTCGTAGCCTCCTGA+TGG 0.572152 5_4:-61750514 None:intergenic
AGTCGTAGCCTCCTGATGGT+GGG 0.574436 5_4:-61750447 None:intergenic
GAGTTATAGTAACCTCCTGA+TGG 0.575530 5_4:-61750577 None:intergenic
TCTGACCCAACCCCATCACC+AGG 0.578655 5_4:+61750043 Msa0862150:CDS
CAGGAAGGAAAGGTGGTGTG+GGG 0.579362 5_4:-61750885 None:intergenic
ACCCCATCACCACCCACTGG+TGG 0.579613 5_4:+61750166 Msa0862150:CDS
AGCCCTCCCTCAGGAGATGG+AGG 0.582164 5_4:+61750292 Msa0862150:CDS
GGTGAGTCGTAGCCTCCTGA+CGG 0.583121 5_4:-61750643 None:intergenic
GGTGGACAATCGCTAGCTGG+GGG 0.583740 5_4:-61750214 None:intergenic
CCACCTCCTGAGTGGTGAGG+TGG 0.583764 5_4:-61749524 None:intergenic
TCACCACCCTCAGATGGTGG+TGG 0.584377 5_4:+61749782 Msa0862150:CDS
ACCATCCGATGGTGGTGATG+GGG 0.584551 5_4:-61749900 None:intergenic
GAGTCGTAGCCTCCTGACGG+AGG 0.586762 5_4:-61750640 None:intergenic
AGGGTTTGATGGTGTTGTCG+GGG 0.587568 5_4:-61750776 None:intergenic
AGAACTTCCACCACCATCTG+AGG 0.587872 5_4:-61749789 None:intergenic
GGTCATAGTCATCATGGCCA+TGG 0.588281 5_4:+61749638 Msa0862150:CDS
GTAATGGCCAAGACTCAAGC+AGG 0.589245 5_4:+61749203 Msa0862150:CDS
AGTGGGTCCTCACCCTCTCA+CGG 0.589505 5_4:+61749599 Msa0862150:CDS
ACCCCATCACCACCATCGGA+TGG 0.589544 5_4:+61749899 Msa0862150:CDS
CTACCACTTCCATAAGTTGG+TGG 0.591036 5_4:-61750823 None:intergenic
ACCCCATCACCACCCTCAGA+TGG 0.591637 5_4:+61749776 Msa0862150:CDS
ACCCCATCACCACCCTCAGA+TGG 0.591637 5_4:+61750010 Msa0862150:CDS
CCATCACCACCCTCAGATGG+TGG 0.592841 5_4:+61750013 Msa0862150:CDS
TTATAGTAACCTCCTGATGG+AGG 0.595018 5_4:-61750574 None:intergenic
CCATCACCACCATCAGGTAG+TGG 0.596644 5_4:+61749959 Msa0862150:CDS
AACACAAGAACTGATGCGCT+CGG 0.597150 5_4:+61751423 Msa0862150:CDS
TTATAACTTCCATCGCCTGA+GGG 0.597171 5_4:-61750139 None:intergenic
CCATTACAGGAACAATAACA+AGG 0.597546 5_4:-61749187 None:intergenic
TGTGATCCAACCCCATCACC+CGG 0.598262 5_4:+61749839 Msa0862150:CDS
GGTGAGTCGTAGCCTCCTGA+TGG 0.598955 5_4:-61750451 None:intergenic
CTGTAACTTCCACTGCCTGA+CGG 0.599012 5_4:-61749734 None:intergenic
TGATGGGGTAGGAGTTGATG+GGG 0.600582 5_4:-61749762 None:intergenic
ACCATCTGAGGGTGGTGATG+GGG 0.600702 5_4:-61749777 None:intergenic
TGGGGATTACTAGGCTGGTG+GGG 0.602911 5_4:+61751324 Msa0862150:CDS
ATTATAACTTCCATCGCCTG+AGG 0.603880 5_4:-61750140 None:intergenic
AACTTACTTGCATGTACCAG+TGG 0.604456 5_4:-61750917 None:intergenic
AGTCGTAGCCTCCTGATGGA+GGG 0.604475 5_4:-61750510 None:intergenic
ACCATCTGAGGGTGGTGATG+GGG 0.605979 5_4:-61750011 None:intergenic
AGTCGTAGCCTCCTGACGGA+GGG 0.606915 5_4:-61750639 None:intergenic
TACCCTCCATCTCCTGAGGG+AGG 0.606933 5_4:-61750295 None:intergenic
TCACCACCCTCAGATGGTGG+CGG 0.608587 5_4:+61750016 Msa0862150:CDS
TATAGTAACCTCCTGATGGA+GGG 0.609611 5_4:-61750573 None:intergenic
TGACTTGATCAGTTGTGTAA+GGG 0.610270 5_4:-61751503 None:intergenic
TTGTAGTACCCTCCTGATGG+AGG 0.611603 5_4:-61750703 None:intergenic
CACACCAAAAGCATTGCCTA+AGG 0.612626 5_4:-61751349 None:intergenic
GTAACTTCCACTGCCTGAAG+GGG 0.613155 5_4:-61749678 None:intergenic
CCAACCCCATCACCACCCAC+TGG 0.613870 5_4:+61750163 Msa0862150:CDS
CCCATCAAACCCTCCATCAG+GGG 0.614465 5_4:+61750375 Msa0862150:CDS
CTTGTGTTGGAAAGTGCTTG+TGG 0.615132 5_4:-61751408 None:intergenic
CCATCACCACCCTCAGATGG+TGG 0.615263 5_4:+61749779 Msa0862150:CDS
AACTAATTAGATCATGCTCT+AGG 0.616122 5_4:-61751615 None:intergenic
GTGTAACTTCCACTACCTGA+TGG 0.616255 5_4:-61749968 None:intergenic
GGGGTTATAGGGTCTTGTGG+TGG 0.620774 5_4:-61750601 None:intergenic
CCATCAAACCCTCCATCAGG+AGG 0.623480 5_4:+61750787 Msa0862150:CDS
GGGCTTGTAGGGTCTGAGGG+TGG 0.625596 5_4:-61750232 None:intergenic
ACTACCTGATGGTGGTGATG+GGG 0.628367 5_4:-61749957 None:intergenic
TAACTTCCATCGCCTGAGGG+TGG 0.628597 5_4:-61750136 None:intergenic
GTGTAACTTCCATCACCACC+TGG 0.630491 5_4:-61750061 None:intergenic
GAACTTCCGCCACCATCTGA+GGG 0.631062 5_4:-61750022 None:intergenic
AGTCCACCACCTCACCACTC+AGG 0.631591 5_4:+61749518 Msa0862150:CDS
CCATCAAATCCTCCATCAGG+AGG 0.632305 5_4:+61750694 Msa0862150:CDS
CCATCACCACCATCGGATGG+TGG 0.633003 5_4:+61749902 Msa0862150:CDS
GGTGAGGACCCACTAGAGGG+TGG 0.634125 5_4:-61749590 None:intergenic
CAGTGGGAGATGGTGCAGGA+AGG 0.636255 5_4:-61750900 None:intergenic
CCATCAAACCCTCCGTCAGG+AGG 0.636944 5_4:+61750631 Msa0862150:CDS
TAACTTCCACCACCATCCGA+TGG 0.637629 5_4:-61749911 None:intergenic
TGGAGTGTAACTTCCACCAG+TGG 0.639524 5_4:-61750179 None:intergenic
GAACTTCCACCACCATCTGA+GGG 0.640554 5_4:-61749788 None:intergenic
AGAGGGTGAGGACCCACTAG+AGG 0.641171 5_4:-61749594 None:intergenic
TTGCATGTACCAGTGGGAGA+TGG 0.641862 5_4:-61750910 None:intergenic
TAGTTCAGTAGATAAATCTG+AGG 0.642316 5_4:-61749234 None:intergenic
GTGCCACTGCCACTAGAGGG+TGG 0.643466 5_4:-61749566 None:intergenic
TAGTACCCTCCATCTCCTGA+GGG 0.643913 5_4:-61750298 None:intergenic
ATAGTACCCTCCATCTCCTG+AGG 0.644068 5_4:-61750299 None:intergenic
CAGCCACCTCCTGAGTGGTG+AGG 0.645083 5_4:-61749527 None:intergenic
AGTGGCACTCCACCCTCTAG+TGG 0.649454 5_4:+61749557 Msa0862150:CDS
GCCCTCCCTCAGGAGATGGA+GGG 0.652399 5_4:+61750293 Msa0862150:CDS
GAGGGTGAGGACCCACTAGA+GGG 0.654500 5_4:-61749593 None:intergenic
GGAGTGTAACTTCCACCAGT+GGG 0.654640 5_4:-61750178 None:intergenic
TGGGGTTGGATCACAATTTG+GGG 0.655319 5_4:-61749831 None:intergenic
ACCATGACCGTGACCGTGAG+AGG 0.657219 5_4:-61749612 None:intergenic
AGGGAACTTGTTGTTCACCA+AGG 0.661827 5_4:-61751484 None:intergenic
CCATCAAACCCTCCATCAGG+GGG 0.662738 5_4:+61750376 Msa0862150:CDS
CTTCCACCACCATCCGATGG+TGG 0.666694 5_4:-61749908 None:intergenic
CCACCAAACCCTCCATCAGG+AGG 0.667889 5_4:+61750502 Msa0862150:CDS
AGTTCAGTAGATAAATCTGA+GGG 0.668203 5_4:-61749233 None:intergenic
CATCAAATCCTCCATCAGGA+GGG 0.671661 5_4:+61750695 Msa0862150:CDS
CATCAAACCCTCCATCAGGA+GGG 0.671661 5_4:+61750788 Msa0862150:CDS
CCACCACCTCACCACTCAGG+AGG 0.673312 5_4:+61749521 Msa0862150:CDS
ACTTACTTGCATGTACCAGT+GGG 0.675025 5_4:-61750916 None:intergenic
CCATCAAACCCTCCATCAGG+AGG 0.675514 5_4:+61750565 Msa0862150:CDS
TAACTTCCACTGCCTGAAGG+GGG 0.677446 5_4:-61749677 None:intergenic
CCATCAAACCCACCATCAGG+AGG 0.679038 5_4:+61750439 Msa0862150:CDS
TCATAACTTCCACCTCCTGG+AGG 0.682134 5_4:-61750100 None:intergenic
CCATGACCGTGACCGTGAGA+GGG 0.687062 5_4:-61749611 None:intergenic
GGGCTTGTAGGATCTTGTGG+TGG 0.691171 5_4:-61750328 None:intergenic
CTTCCGCCACCATCTGAGGG+TGG 0.693273 5_4:-61750019 None:intergenic
TACCACAGCCACCTCCTGAG+TGG 0.694935 5_4:-61749532 None:intergenic
GACCCAACCCCATCACCAGG+TGG 0.702466 5_4:+61750046 Msa0862150:CDS
ACTCACCCACAACTCATCTG+GGG 0.705013 5_4:+61751306 Msa0862150:CDS
CTTCCACCACCATCTGAGGG+TGG 0.705692 5_4:-61749785 None:intergenic
GTGTAACTTCCACCAGTGGG+TGG 0.711537 5_4:-61750175 None:intergenic
TAACTTCCACTGCCTGACGG+TGG 0.714222 5_4:-61749731 None:intergenic
GTGATGATGATCCATGACCA+TGG 0.722892 5_4:-61749655 None:intergenic
TAACTTCCACTACCTGATGG+TGG 0.726578 5_4:-61749965 None:intergenic
TGATGGGGTAGGAGTTGACG+GGG 0.727815 5_4:-61749996 None:intergenic
ACTCCATCAACTCCTCCAGG+AGG 0.736849 5_4:+61750088 Msa0862150:CDS
GATCCAACCCCATCACCCGG+TGG 0.738890 5_4:+61749842 Msa0862150:CDS
GGGGTTGGATCACAATTTGG+GGG 0.808050 5_4:-61749830 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTAATGATATGATTT+TGG + chr5_4:61749317-61749336 Msa0862150:intron 10.0%
!!! AAAAATTATAGTTTTTATCA+GGG - chr5_4:61751012-61751031 None:intergenic 10.0%
!!! AAAAAATTATAGTTTTTATC+AGG - chr5_4:61751013-61751032 None:intergenic 10.0%
!!! AAAAAAGTTTTATATCTTCA+AGG - chr5_4:61750980-61750999 None:intergenic 15.0%
!!! AAAATTATAGTTTTTATCAG+GGG - chr5_4:61751011-61751030 None:intergenic 15.0%
!! AAAATTACATACACATATTA+CGG - chr5_4:61751099-61751118 None:intergenic 15.0%
!!! TTATATTTTCAAAATCGATA+TGG - chr5_4:61751142-61751161 None:intergenic 15.0%
!! AAATATAAATCATGTACAAA+AGG + chr5_4:61751154-61751173 Msa0862150:intron 15.0%
!! GAAGTCTTAAATATAATATA+CGG - chr5_4:61751672-61751691 None:intergenic 15.0%
!! TGTTAATTAGCATTTATATA+TGG + chr5_4:61751774-61751793 Msa0862150:three_prime_UTR 15.0%
!! ATTAACTTTATTCAAAACTT+AGG - chr5_4:61751802-61751821 None:intergenic 15.0%
!!! TTCTTATTTATGCAAAATAG+TGG + chr5_4:61749290-61749309 Msa0862150:intron 20.0%
!!! CAACATGAATAAATTTTACT+TGG - chr5_4:61751066-61751085 None:intergenic 20.0%
!! AAATTACATACACATATTAC+GGG - chr5_4:61751098-61751117 None:intergenic 20.0%
!!! TTTTGATAATTTACATCATG+AGG - chr5_4:61751212-61751231 None:intergenic 20.0%
!!! CATTGATTTTGAATTGTTGA+AGG + chr5_4:61749488-61749507 Msa0862150:intron 25.0%
! AATTACATACACATATTACG+GGG - chr5_4:61751097-61751116 None:intergenic 25.0%
!! AAATCGATATGGACTAAATA+AGG - chr5_4:61751131-61751150 None:intergenic 25.0%
!! TACAAAAGGTAGTTTTTACA+GGG + chr5_4:61751168-61751187 Msa0862150:intron 25.0%
! ATGAGGTTTAAATATGTTGT+TGG - chr5_4:61751195-61751214 None:intergenic 25.0%
! TGTGTTAATTTATCCTATGA+TGG + chr5_4:61751728-61751747 Msa0862150:three_prime_UTR 25.0%
!! AAGTTAATATTTTGCTGCTA+TGG + chr5_4:61751814-61751833 Msa0862150:three_prime_UTR 25.0%
AGTTCAGTAGATAAATCTGA+GGG - chr5_4:61749236-61749255 None:intergenic 30.0%
TAGTTCAGTAGATAAATCTG+AGG - chr5_4:61749237-61749256 None:intergenic 30.0%
CAATGTATTACACAACATGA+GGG - chr5_4:61749473-61749492 None:intergenic 30.0%
TCAATGTATTACACAACATG+AGG - chr5_4:61749474-61749493 None:intergenic 30.0%
TATGTTGCACTGTAATGTAA+AGG + chr5_4:61750948-61750967 Msa0862150:intron 30.0%
! GTACAAAAGGTAGTTTTTAC+AGG + chr5_4:61751167-61751186 Msa0862150:intron 30.0%
TGCAGATTTGAGGAAAAAAA+AGG - chr5_4:61751275-61751294 None:intergenic 30.0%
AACTAATTAGATCATGCTCT+AGG - chr5_4:61751618-61751637 None:intergenic 30.0%
AGAGCATGATCTAATTAGTT+TGG + chr5_4:61751618-61751637 Msa0862150:exon 30.0%
!!! TAGTAAGAGTGTTTTGCATT+AGG + chr5_4:61751692-61751711 Msa0862150:three_prime_UTR 30.0%
!! TGCTTTGAGAGAAAAGGAAA+GGG - chr5_4:61749093-61749112 None:intergenic 35.0%
!! TTGCTTTGAGAGAAAAGGAA+AGG - chr5_4:61749094-61749113 None:intergenic 35.0%
!! CATAGTTGCTTTGAGAGAAA+AGG - chr5_4:61749099-61749118 None:intergenic 35.0%
! CTTTTCTCTCAAAGCAACTA+TGG + chr5_4:61749097-61749116 Msa0862150:exon 35.0%
CCATTACAGGAACAATAACA+AGG - chr5_4:61749190-61749209 None:intergenic 35.0%
!! CCTTGTTATTGTTCCTGTAA+TGG + chr5_4:61749187-61749206 Msa0862150:CDS 35.0%
TTACAGTGCAACATAGTAGA+AGG - chr5_4:61750943-61750962 None:intergenic 35.0%
AGCTTCTTATCTTAACTCCT+TGG + chr5_4:61751467-61751486 Msa0862150:CDS 35.0%
TGACTTGATCAGTTGTGTAA+GGG - chr5_4:61751506-61751525 None:intergenic 35.0%
! AGGCTTAATTTTTCCCTCAT+TGG - chr5_4:61751598-61751617 None:intergenic 35.0%
AGAAAAGGAAAGGGAGGATT+TGG - chr5_4:61749084-61749103 None:intergenic 40.0%
TTTGAGAGAAAAGGAAAGGG+AGG - chr5_4:61749090-61749109 None:intergenic 40.0%
TCTTACCATGTTCACAATGC+TGG + chr5_4:61749145-61749164 Msa0862150:CDS 40.0%
CTTGAAAGCTACACAGTAGT+AGG + chr5_4:61749346-61749365 Msa0862150:intron 40.0%
ATGGGGTTGGATCACAATTT+GGG - chr5_4:61749835-61749854 None:intergenic 40.0%
TTATAACTTCCATCGCCTGA+GGG - chr5_4:61750142-61750161 None:intergenic 40.0%
ATTATAACTTCCATCGCCTG+AGG - chr5_4:61750143-61750162 None:intergenic 40.0%
!! ATGGTGTTGTTGGGGTTATA+GGG - chr5_4:61750423-61750442 None:intergenic 40.0%
!! ATGGTGTTGTTGGGGTTATA+GGG - chr5_4:61750423-61750442 None:intergenic 40.0%
TATAGTAACCTCCTGATGGA+GGG - chr5_4:61750576-61750595 None:intergenic 40.0%
TTATAGTAACCTCCTGATGG+AGG - chr5_4:61750577-61750596 None:intergenic 40.0%
GAGTTATAGTAACCTCCTGA+TGG - chr5_4:61750580-61750599 None:intergenic 40.0%
!! ATGGTGTTGTAGGGGTTATA+GGG - chr5_4:61750615-61750634 None:intergenic 40.0%
!! ATGGTGTTGTTGGGGTTAAA+GGG - chr5_4:61750678-61750697 None:intergenic 40.0%
!! AGGATTTGATGGTGTTGTTG+GGG - chr5_4:61750686-61750705 None:intergenic 40.0%
!! GAGGATTTGATGGTGTTGTT+GGG - chr5_4:61750687-61750706 None:intergenic 40.0%
!! ATGGTGTTGTTGGGGTTATA+GGG - chr5_4:61750423-61750442 None:intergenic 40.0%
!! AAGGGTTTGATGGTGTTGTT+GGG - chr5_4:61750753-61750772 None:intergenic 40.0%
!! AAAGGGTTTGATGGTGTTGT+TGG - chr5_4:61750754-61750773 None:intergenic 40.0%
TACAACTCACCACCAACTTA+TGG + chr5_4:61750814-61750833 Msa0862150:CDS 40.0%
ACTTACTTGCATGTACCAGT+GGG - chr5_4:61750919-61750938 None:intergenic 40.0%
AACTTACTTGCATGTACCAG+TGG - chr5_4:61750920-61750939 None:intergenic 40.0%
! CTGACTTGATCAGTTGTGTA+AGG - chr5_4:61751507-61751526 None:intergenic 40.0%
AGCATCACTCAGCTCAAATA+AGG + chr5_4:61751539-61751558 Msa0862150:CDS 40.0%
! ACAAGCACATCTTTTCCAGA+TGG + chr5_4:61751572-61751591 Msa0862150:CDS 40.0%
TGGAGAAGTGAGTGAAGAGT+GGG - chr5_4:61749053-61749072 None:intergenic 45.0%
TTGGAGAAGTGAGTGAAGAG+TGG - chr5_4:61749054-61749073 None:intergenic 45.0%
AAAGGAAAGGGAGGATTTGG+AGG - chr5_4:61749081-61749100 None:intergenic 45.0%
TGCAACCAGCATTGTGAACA+TGG - chr5_4:61749153-61749172 None:intergenic 45.0%
! GTTCACAATGCTGGTTGCAT+TGG + chr5_4:61749154-61749173 Msa0862150:CDS 45.0%
AGAACTTCCTGCTTGAGTCT+TGG - chr5_4:61749213-61749232 None:intergenic 45.0%
GGTCATGGTCATAGTCATCA+TGG + chr5_4:61749632-61749651 Msa0862150:CDS 45.0%
! GTGATGATGATCCATGACCA+TGG - chr5_4:61749658-61749677 None:intergenic 45.0%
TGTAACTTCCACTGCCTGAA+GGG - chr5_4:61749682-61749701 None:intergenic 45.0%
TTGTAACTTCCACTGCCTGA+AGG - chr5_4:61749683-61749702 None:intergenic 45.0%
!! ACAATTTGGGGGAGTTGATG+GGG - chr5_4:61749822-61749841 None:intergenic 45.0%
! CACAATTTGGGGGAGTTGAT+GGG - chr5_4:61749823-61749842 None:intergenic 45.0%
TCACAATTTGGGGGAGTTGA+TGG - chr5_4:61749824-61749843 None:intergenic 45.0%
TGGGGTTGGATCACAATTTG+GGG - chr5_4:61749834-61749853 None:intergenic 45.0%
GATGGGGTTGGATCACAATT+TGG - chr5_4:61749836-61749855 None:intergenic 45.0%
TAACTTCCACTACCTGATGG+TGG - chr5_4:61749968-61749987 None:intergenic 45.0%
GTGTAACTTCCACTACCTGA+TGG - chr5_4:61749971-61749990 None:intergenic 45.0%
!! TTGACGGTGTTGATGGTGTT+GGG - chr5_4:61750273-61750292 None:intergenic 45.0%
!! TTGGAGTTGAGGGTGTTGTT+GGG - chr5_4:61750351-61750370 None:intergenic 45.0%
!! GATGGTGTTGTTGGGGTTAT+AGG - chr5_4:61750424-61750443 None:intergenic 45.0%
!! TGGGTTTGATGGTGTTGTTG+GGG - chr5_4:61750431-61750450 None:intergenic 45.0%
!! GTGGGTTTGATGGTGTTGTT+GGG - chr5_4:61750432-61750451 None:intergenic 45.0%
GTTGGGGTTATAGGGTTTGA+TGG - chr5_4:61750478-61750497 None:intergenic 45.0%
!! GTGGTGTTGTTGGGGTTATA+GGG - chr5_4:61750486-61750505 None:intergenic 45.0%
!! GATGGTGTTGTTGGGGTTAT+AGG - chr5_4:61750424-61750443 None:intergenic 45.0%
!! AGGGTTTGATGGTGTTGTTG+GGG - chr5_4:61750557-61750576 None:intergenic 45.0%
!! GAGGGTTTGATGGTGTTGTT+GGG - chr5_4:61750558-61750577 None:intergenic 45.0%
!! GATGGTGTTGTAGGGGTTAT+AGG - chr5_4:61750616-61750635 None:intergenic 45.0%
!! AGGGTTTGATGGTGTTGTAG+GGG - chr5_4:61750623-61750642 None:intergenic 45.0%
!! GAGGGTTTGATGGTGTTGTA+GGG - chr5_4:61750624-61750643 None:intergenic 45.0%
!! GATGGTGTTGTTGGGGTTAA+AGG - chr5_4:61750679-61750698 None:intergenic 45.0%
!! GGAGGATTTGATGGTGTTGT+TGG - chr5_4:61750688-61750707 None:intergenic 45.0%
ACACCATCAAATCCTCCATC+AGG + chr5_4:61750691-61750710 Msa0862150:CDS 45.0%
CATCAAATCCTCCATCAGGA+GGG + chr5_4:61750695-61750714 Msa0862150:CDS 45.0%
!! GATGGTGTTGTTGGGGTTAT+AGG - chr5_4:61750424-61750443 None:intergenic 45.0%
!! AGGGTTTGATGGTGTTGTTG+GGG - chr5_4:61750557-61750576 None:intergenic 45.0%
!! ATGGTGTTGTCGGGGTTAAA+GGG - chr5_4:61750771-61750790 None:intergenic 45.0%
TCACCACCAACTTATGGAAG+TGG + chr5_4:61750820-61750839 Msa0862150:CDS 45.0%
! CTACCACTTCCATAAGTTGG+TGG - chr5_4:61750826-61750845 None:intergenic 45.0%
TTCCTCAAATCTGCAGCTAC+TGG + chr5_4:61751280-61751299 Msa0862150:intron 45.0%
TTCCAGTAGCTGCAGATTTG+AGG - chr5_4:61751285-61751304 None:intergenic 45.0%
ATACTCACCCACAACTCATC+TGG + chr5_4:61751304-61751323 Msa0862150:CDS 45.0%
TACTCACCCACAACTCATCT+GGG + chr5_4:61751305-61751324 Msa0862150:CDS 45.0%
GTAATCCCCAGATGAGTTGT+GGG - chr5_4:61751314-61751333 None:intergenic 45.0%
AGTAATCCCCAGATGAGTTG+TGG - chr5_4:61751315-61751334 None:intergenic 45.0%
CAACTCATCTGGGGATTACT+AGG + chr5_4:61751315-61751334 Msa0862150:CDS 45.0%
! GGAACCTTAGGCAATGCTTT+TGG + chr5_4:61751345-61751364 Msa0862150:CDS 45.0%
!! CACACCAAAAGCATTGCCTA+AGG - chr5_4:61751352-61751371 None:intergenic 45.0%
!! CTTGTGTTGGAAAGTGCTTG+TGG - chr5_4:61751411-61751430 None:intergenic 45.0%
AACACAAGAACTGATGCGCT+CGG + chr5_4:61751423-61751442 Msa0862150:CDS 45.0%
!! AGGGAACTTGTTGTTCACCA+AGG - chr5_4:61751487-61751506 None:intergenic 45.0%
! TCTTTTCCAGATGGCCAATG+AGG + chr5_4:61751581-61751600 Msa0862150:CDS 45.0%
! CTTTTCCAGATGGCCAATGA+GGG + chr5_4:61751582-61751601 Msa0862150:CDS 45.0%
! TTTTTCCCTCATTGGCCATC+TGG - chr5_4:61751590-61751609 None:intergenic 45.0%
CAGTGCACTGAATCCATCAT+AGG - chr5_4:61751744-61751763 None:intergenic 45.0%
GCTTGAGTCTTGGCCATTAC+AGG - chr5_4:61749203-61749222 None:intergenic 50.0%
GTAATGGCCAAGACTCAAGC+AGG + chr5_4:61749203-61749222 Msa0862150:CDS 50.0%
GGTCATAGTCATCATGGCCA+TGG + chr5_4:61749638-61749657 Msa0862150:CDS 50.0%
AGTCATCATGGCCATGGTCA+TGG + chr5_4:61749644-61749663 Msa0862150:CDS 50.0%
TAACTTCCACTGCCTGAAGG+GGG - chr5_4:61749680-61749699 None:intergenic 50.0%
GTAACTTCCACTGCCTGAAG+GGG - chr5_4:61749681-61749700 None:intergenic 50.0%
!! GGAGTTGGAGTTGATGGAGT+TGG - chr5_4:61749707-61749726 None:intergenic 50.0%
CTGTAACTTCCACTGCCTGA+CGG - chr5_4:61749737-61749756 None:intergenic 50.0%
!! TGATGGGGTAGGAGTTGATG+GGG - chr5_4:61749765-61749784 None:intergenic 50.0%
! GTGATGGGGTAGGAGTTGAT+GGG - chr5_4:61749766-61749785 None:intergenic 50.0%
GAACTTCCACCACCATCTGA+GGG - chr5_4:61749791-61749810 None:intergenic 50.0%
AGAACTTCCACCACCATCTG+AGG - chr5_4:61749792-61749811 None:intergenic 50.0%
GGGGTTGGATCACAATTTGG+GGG - chr5_4:61749833-61749852 None:intergenic 50.0%
ACTGTAACTTCCGTCACCAC+CGG - chr5_4:61749861-61749880 None:intergenic 50.0%
TAACTTCCACCACCATCCGA+TGG - chr5_4:61749914-61749933 None:intergenic 50.0%
!! ACTACCTGATGGTGGTGATG+GGG - chr5_4:61749960-61749979 None:intergenic 50.0%
!! CACTACCTGATGGTGGTGAT+GGG - chr5_4:61749961-61749980 None:intergenic 50.0%
TTCCATCACCACCTGGTGAT+GGG - chr5_4:61750057-61750076 None:intergenic 50.0%
GTGTAACTTCCATCACCACC+TGG - chr5_4:61750064-61750083 None:intergenic 50.0%
TCATAACTTCCACCTCCTGG+AGG - chr5_4:61750103-61750122 None:intergenic 50.0%
GGATCATAACTTCCACCTCC+TGG - chr5_4:61750106-61750125 None:intergenic 50.0%
GGAGTGTAACTTCCACCAGT+GGG - chr5_4:61750181-61750200 None:intergenic 50.0%
TGGAGTGTAACTTCCACCAG+TGG - chr5_4:61750182-61750201 None:intergenic 50.0%
!! GTTGATGGTGTTGGGTCTGA+GGG - chr5_4:61750265-61750284 None:intergenic 50.0%
!! TGTTGATGGTGTTGGGTCTG+AGG - chr5_4:61750266-61750285 None:intergenic 50.0%
!! CTTGACGGTGTTGATGGTGT+TGG - chr5_4:61750274-61750293 None:intergenic 50.0%
TAGTACCCTCCATCTCCTGA+GGG - chr5_4:61750301-61750320 None:intergenic 50.0%
ATAGTACCCTCCATCTCCTG+AGG - chr5_4:61750302-61750321 None:intergenic 50.0%
GTTGGGCTTGTAGGATCTTG+TGG - chr5_4:61750334-61750353 None:intergenic 50.0%
!! GTTGGAGTTGAGGGTGTTGT+TGG - chr5_4:61750352-61750371 None:intergenic 50.0%
GATGGGGTTGTTGGAGTTGA+GGG - chr5_4:61750361-61750380 None:intergenic 50.0%
TGATGGGGTTGTTGGAGTTG+AGG - chr5_4:61750362-61750381 None:intergenic 50.0%
GTTGGGGTTATAGGGTCTGA+TGG - chr5_4:61750415-61750434 None:intergenic 50.0%
!! GGTGGGTTTGATGGTGTTGT+TGG - chr5_4:61750433-61750452 None:intergenic 50.0%
ACACCATCAAACCCACCATC+AGG + chr5_4:61750436-61750455 Msa0862150:CDS 50.0%
GGGGTTATAGGGTTTGATGG+TGG - chr5_4:61750475-61750494 None:intergenic 50.0%
!! GGTGGTGTTGTTGGGGTTAT+AGG - chr5_4:61750487-61750506 None:intergenic 50.0%
!! AGGGTTTGGTGGTGTTGTTG+GGG - chr5_4:61750494-61750513 None:intergenic 50.0%
!! GAGGGTTTGGTGGTGTTGTT+GGG - chr5_4:61750495-61750514 None:intergenic 50.0%
GTTGGGGTTATAGGGTCTGA+TGG - chr5_4:61750415-61750434 None:intergenic 50.0%
!! GGAGGGTTTGATGGTGTTGT+TGG - chr5_4:61750559-61750578 None:intergenic 50.0%
ACACCATCAAACCCTCCATC+AGG + chr5_4:61750562-61750581 Msa0862150:CDS 50.0%
GTAGGGGTTATAGGGTCTTG+TGG - chr5_4:61750607-61750626 None:intergenic 50.0%
!! GGAGGGTTTGATGGTGTTGT+AGG - chr5_4:61750559-61750578 None:intergenic 50.0%
GTTGGGGTTAAAGGGTCTGT+TGG - chr5_4:61750670-61750689 None:intergenic 50.0%
CCTCCTGATGGAGGATTTGA+TGG - chr5_4:61750697-61750716 None:intergenic 50.0%
CCATCAAATCCTCCATCAGG+AGG + chr5_4:61750694-61750713 Msa0862150:CDS 50.0%
TTGTAGTACCCTCCTGATGG+AGG - chr5_4:61750706-61750725 None:intergenic 50.0%
GAGTTGTAGTACCCTCCTGA+TGG - chr5_4:61750709-61750728 None:intergenic 50.0%
GTTGGGGTTATAGGGTCTTG+TGG - chr5_4:61750736-61750755 None:intergenic 50.0%
GTCGGGGTTAAAGGGTTTGA+TGG - chr5_4:61750763-61750782 None:intergenic 50.0%
!! GATGGTGTTGTCGGGGTTAA+AGG - chr5_4:61750772-61750791 None:intergenic 50.0%
!! AGGGTTTGATGGTGTTGTCG+GGG - chr5_4:61750779-61750798 None:intergenic 50.0%
!! GAGGGTTTGATGGTGTTGTC+GGG - chr5_4:61750780-61750799 None:intergenic 50.0%
!! GGAGGGTTTGATGGTGTTGT+CGG - chr5_4:61750559-61750578 None:intergenic 50.0%
ACACCATCAAACCCTCCATC+AGG + chr5_4:61750562-61750581 Msa0862150:CDS 50.0%
CATCAAACCCTCCATCAGGA+GGG + chr5_4:61750566-61750585 Msa0862150:CDS 50.0%
TGTAGTACCCTCCTGATGGA+GGG - chr5_4:61750705-61750724 None:intergenic 50.0%
TTGTAGTACCCTCCTGATGG+AGG - chr5_4:61750706-61750725 None:intergenic 50.0%
GAGTTGTAGTACCCTCCTGA+TGG - chr5_4:61750709-61750728 None:intergenic 50.0%
GGGCTACCACTTCCATAAGT+TGG - chr5_4:61750829-61750848 None:intergenic 50.0%
AAAGGTGGTGTGGGGAAAGT+GGG - chr5_4:61750880-61750899 None:intergenic 50.0%
TTGCATGTACCAGTGGGAGA+TGG - chr5_4:61750913-61750932 None:intergenic 50.0%
ACTCACCCACAACTCATCTG+GGG + chr5_4:61751306-61751325 Msa0862150:CDS 50.0%
TCATCTGGGGATTACTAGGC+TGG + chr5_4:61751319-61751338 Msa0862150:CDS 50.0%
! TTTGGTGTGCATAGTCTGCC+AGG + chr5_4:61751363-61751382 Msa0862150:CDS 50.0%
GAGCGCATCAGTTCTTGTGT+TGG - chr5_4:61751424-61751443 None:intergenic 50.0%
! CTCGGAGCACTTTACAGAGA+AGG + chr5_4:61751441-61751460 Msa0862150:CDS 50.0%
GGGAGGATTTGGAGGTGGTT+TGG - chr5_4:61749073-61749092 None:intergenic 55.0%
GGAAAGGGAGGATTTGGAGG+TGG - chr5_4:61749078-61749097 None:intergenic 55.0%
GGATCATCATCACCCCCTTC+AGG + chr5_4:61749665-61749684 Msa0862150:CDS 55.0%
!! GGTGACGGAGTTGGAGTTGA+TGG - chr5_4:61749713-61749732 None:intergenic 55.0%
TAACTTCCACTGCCTGACGG+TGG - chr5_4:61749734-61749753 None:intergenic 55.0%
!! GGTGATGGGGTAGGAGTTGA+TGG - chr5_4:61749767-61749786 None:intergenic 55.0%
! ACCATCTGAGGGTGGTGATG+GGG - chr5_4:61749780-61749799 None:intergenic 55.0%
CACCATCTGAGGGTGGTGAT+GGG - chr5_4:61749781-61749800 None:intergenic 55.0%
!! TTTGGGGGAGTTGATGGGGT+TGG - chr5_4:61749818-61749837 None:intergenic 55.0%
TGTGATCCAACCCCATCACC+CGG + chr5_4:61749839-61749858 Msa0862150:CDS 55.0%
CTGTAACTTCCGTCACCACC+GGG - chr5_4:61749860-61749879 None:intergenic 55.0%
!! TGATGGGGTGGGAGTTGATG+GGG - chr5_4:61749888-61749907 None:intergenic 55.0%
! GTGATGGGGTGGGAGTTGAT+GGG - chr5_4:61749889-61749908 None:intergenic 55.0%
! ACCATCCGATGGTGGTGATG+GGG - chr5_4:61749903-61749922 None:intergenic 55.0%
! CACCATCCGATGGTGGTGAT+GGG - chr5_4:61749904-61749923 None:intergenic 55.0%
!! GGGGTTGGAGTTGATGGTGT+TGG - chr5_4:61749941-61749960 None:intergenic 55.0%
!! GGTGATGGGGTTGGAGTTGA+TGG - chr5_4:61749947-61749966 None:intergenic 55.0%
!! CCACTACCTGATGGTGGTGA+TGG - chr5_4:61749962-61749981 None:intergenic 55.0%
CCATCACCACCATCAGGTAG+TGG + chr5_4:61749959-61749978 Msa0862150:CDS 55.0%
TGATGGGGTAGGAGTTGACG+GGG - chr5_4:61749999-61750018 None:intergenic 55.0%
! GTGATGGGGTAGGAGTTGAC+GGG - chr5_4:61750000-61750019 None:intergenic 55.0%
!! GGTGATGGGGTAGGAGTTGA+CGG - chr5_4:61749767-61749786 None:intergenic 55.0%
! ACCATCTGAGGGTGGTGATG+GGG - chr5_4:61749780-61749799 None:intergenic 55.0%
CACCATCTGAGGGTGGTGAT+GGG - chr5_4:61749781-61749800 None:intergenic 55.0%
GAACTTCCGCCACCATCTGA+GGG - chr5_4:61750025-61750044 None:intergenic 55.0%
AGAACTTCCGCCACCATCTG+AGG - chr5_4:61750026-61750045 None:intergenic 55.0%
! TCCATCACCACCTGGTGATG+GGG - chr5_4:61750056-61750075 None:intergenic 55.0%
CTTCCATCACCACCTGGTGA+TGG - chr5_4:61750058-61750077 None:intergenic 55.0%
!! CCTGGAGGAGTTGATGGAGT+TGG - chr5_4:61750088-61750107 None:intergenic 55.0%
CCAACTCCATCAACTCCTCC+AGG + chr5_4:61750085-61750104 Msa0862150:CDS 55.0%
ACTCCATCAACTCCTCCAGG+AGG + chr5_4:61750088-61750107 Msa0862150:CDS 55.0%
TAACTTCCATCGCCTGAGGG+TGG - chr5_4:61750139-61750158 None:intergenic 55.0%
TTCCACCAGTGGGTGGTGAT+GGG - chr5_4:61750171-61750190 None:intergenic 55.0%
GTGTAACTTCCACCAGTGGG+TGG - chr5_4:61750178-61750197 None:intergenic 55.0%
AGGGTGGACAATCGCTAGCT+GGG - chr5_4:61750219-61750238 None:intergenic 55.0%
!! AGGGTGTTGTCGGGCTTGTA+GGG - chr5_4:61750246-61750265 None:intergenic 55.0%
!! TTGGGTCTGAGGGTGTTGTC+GGG - chr5_4:61750255-61750274 None:intergenic 55.0%
!! GTTGGGTCTGAGGGTGTTGT+CGG - chr5_4:61750256-61750275 None:intergenic 55.0%
GGGCTTGTAGGATCTTGTGG+TGG - chr5_4:61750331-61750350 None:intergenic 55.0%
!! GAGGGTGTTGTTGGGCTTGT+AGG - chr5_4:61750343-61750362 None:intergenic 55.0%
GGAGGGTTTGATGGGGTTGT+TGG - chr5_4:61750370-61750389 None:intergenic 55.0%
ACCCCATCAAACCCTCCATC+AGG + chr5_4:61750373-61750392 Msa0862150:CDS 55.0%
CCCTGATGGAGGGTTTGATG+GGG - chr5_4:61750377-61750396 None:intergenic 55.0%
CCCCATCAAACCCTCCATCA+GGG + chr5_4:61750374-61750393 Msa0862150:CDS 55.0%
CCCCTGATGGAGGGTTTGAT+GGG - chr5_4:61750378-61750397 None:intergenic 55.0%
CCCATCAAACCCTCCATCAG+GGG + chr5_4:61750375-61750394 Msa0862150:CDS 55.0%
CCATCAAACCCTCCATCAGG+GGG + chr5_4:61750376-61750395 Msa0862150:CDS 55.0%
GGGGTTATAGGGTCTGATGG+TGG - chr5_4:61750412-61750431 None:intergenic 55.0%
!! CCTCCTGATGGTGGGTTTGA+TGG - chr5_4:61750442-61750461 None:intergenic 55.0%
CCATCAAACCCACCATCAGG+AGG + chr5_4:61750439-61750458 Msa0862150:CDS 55.0%
AGTCGTAGCCTCCTGATGGT+GGG - chr5_4:61750450-61750469 None:intergenic 55.0%
!! GGAGGGTTTGGTGGTGTTGT+TGG - chr5_4:61750496-61750515 None:intergenic 55.0%
ACACCACCAAACCCTCCATC+AGG + chr5_4:61750499-61750518 Msa0862150:CDS 55.0%
TAGCCTCCTGATGGAGGGTT+TGG - chr5_4:61750508-61750527 None:intergenic 55.0%
AGTCGTAGCCTCCTGATGGA+GGG - chr5_4:61750513-61750532 None:intergenic 55.0%
GGGGTTATAGGGTCTGATGG+TGG - chr5_4:61750412-61750431 None:intergenic 55.0%
CCTCCTGATGGAGGGTTTGA+TGG - chr5_4:61750568-61750587 None:intergenic 55.0%
CCATCAAACCCTCCATCAGG+AGG + chr5_4:61750376-61750395 Msa0862150:CDS 55.0%
! GGGGTTATAGGGTCTTGTGG+TGG - chr5_4:61750604-61750623 None:intergenic 55.0%
ACACCATCAAACCCTCCGTC+AGG + chr5_4:61750628-61750647 Msa0862150:CDS 55.0%
GGGGTTAAAGGGTCTGTTGG+TGG - chr5_4:61750667-61750686 None:intergenic 55.0%
! GGGGTTATAGGGTCTTGTGG+TGG - chr5_4:61750604-61750623 None:intergenic 55.0%
CCTCCTGATGGAGGGTTTGA+TGG - chr5_4:61750568-61750587 None:intergenic 55.0%
CCATCAAACCCTCCATCAGG+AGG + chr5_4:61750376-61750395 Msa0862150:CDS 55.0%
! AATGGGGTGCCAGGATCGAT+CGG - chr5_4:61750853-61750872 None:intergenic 55.0%
TGGGGAAAGTGGGGGTCAAT+GGG - chr5_4:61750870-61750889 None:intergenic 55.0%
AAGGTGGTGTGGGGAAAGTG+GGG - chr5_4:61750879-61750898 None:intergenic 55.0%
GAAAGGTGGTGTGGGGAAAG+TGG - chr5_4:61750881-61750900 None:intergenic 55.0%
CAGGAAGGAAAGGTGGTGTG+GGG - chr5_4:61750888-61750907 None:intergenic 55.0%
GCAGGAAGGAAAGGTGGTGT+GGG - chr5_4:61750889-61750908 None:intergenic 55.0%
TGCAGGAAGGAAAGGTGGTG+TGG - chr5_4:61750890-61750909 None:intergenic 55.0%
GATGGTGCAGGAAGGAAAGG+TGG - chr5_4:61750895-61750914 None:intergenic 55.0%
GGAGATGGTGCAGGAAGGAA+AGG - chr5_4:61750898-61750917 None:intergenic 55.0%
TCTGGGGATTACTAGGCTGG+TGG + chr5_4:61751322-61751341 Msa0862150:CDS 55.0%
CTGGGGATTACTAGGCTGGT+GGG + chr5_4:61751323-61751342 Msa0862150:CDS 55.0%
TGGGGATTACTAGGCTGGTG+GGG + chr5_4:61751324-61751343 Msa0862150:CDS 55.0%
GTGCATAGTCTGCCAGGACT+CGG + chr5_4:61751369-61751388 Msa0862150:CDS 55.0%
AGTCCACCACCTCACCACTC+AGG + chr5_4:61749518-61749537 Msa0862150:CDS 60.0%
TACCACAGCCACCTCCTGAG+TGG - chr5_4:61749535-61749554 None:intergenic 60.0%
AGTGGCACTCCACCCTCTAG+TGG + chr5_4:61749557-61749576 Msa0862150:CDS 60.0%
ACTCCACCCTCTAGTGGCAG+TGG + chr5_4:61749563-61749582 Msa0862150:CDS 60.0%
! GGAGTGCCACTGCCACTAGA+GGG - chr5_4:61749572-61749591 None:intergenic 60.0%
! TGGAGTGCCACTGCCACTAG+AGG - chr5_4:61749573-61749592 None:intergenic 60.0%
AGTGGCACTCCACCCTCTAG+TGG + chr5_4:61749557-61749576 Msa0862150:CDS 60.0%
GTGGCACTCCACCCTCTAGT+GGG + chr5_4:61749558-61749577 Msa0862150:CDS 60.0%
GAGGGTGAGGACCCACTAGA+GGG - chr5_4:61749596-61749615 None:intergenic 60.0%
AGAGGGTGAGGACCCACTAG+AGG - chr5_4:61749597-61749616 None:intergenic 60.0%
AGTGGGTCCTCACCCTCTCA+CGG + chr5_4:61749599-61749618 Msa0862150:CDS 60.0%
TCCTCACCCTCTCACGGTCA+CGG + chr5_4:61749605-61749624 Msa0862150:CDS 60.0%
CCATGACCGTGACCGTGAGA+GGG - chr5_4:61749614-61749633 None:intergenic 60.0%
ACCATGACCGTGACCGTGAG+AGG - chr5_4:61749615-61749634 None:intergenic 60.0%
CACGGTCACGGTCATGGTCA+TGG + chr5_4:61749617-61749636 Msa0862150:CDS 60.0%
TCATCACCCCCTTCAGGCAG+TGG + chr5_4:61749671-61749690 Msa0862150:CDS 60.0%
!! GGGGTAGGAGTTGATGGGGT+TGG - chr5_4:61749761-61749780 None:intergenic 60.0%
!! TCTGAGGGTGGTGATGGGGT+AGG - chr5_4:61749776-61749795 None:intergenic 60.0%
ACCCCATCACCACCCTCAGA+TGG + chr5_4:61749776-61749795 Msa0862150:CDS 60.0%
CCACCATCTGAGGGTGGTGA+TGG - chr5_4:61749782-61749801 None:intergenic 60.0%
CCATCACCACCCTCAGATGG+TGG + chr5_4:61749779-61749798 Msa0862150:CDS 60.0%
! TCACCACCCTCAGATGGTGG+TGG + chr5_4:61749782-61749801 Msa0862150:CDS 60.0%
CTTCCACCACCATCTGAGGG+TGG - chr5_4:61749788-61749807 None:intergenic 60.0%
TTCCGTCACCACCGGGTGAT+GGG - chr5_4:61749853-61749872 None:intergenic 60.0%
!! GGTGATGGGGTGGGAGTTGA+TGG - chr5_4:61749890-61749909 None:intergenic 60.0%
TCCCACCCCATCACCACCAT+CGG + chr5_4:61749895-61749914 Msa0862150:CDS 60.0%
!! TCCGATGGTGGTGATGGGGT+GGG - chr5_4:61749899-61749918 None:intergenic 60.0%
!! ATCCGATGGTGGTGATGGGG+TGG - chr5_4:61749900-61749919 None:intergenic 60.0%
ACCCCATCACCACCATCGGA+TGG + chr5_4:61749899-61749918 Msa0862150:CDS 60.0%
! CCACCATCCGATGGTGGTGA+TGG - chr5_4:61749905-61749924 None:intergenic 60.0%
CCATCACCACCATCGGATGG+TGG + chr5_4:61749902-61749921 Msa0862150:CDS 60.0%
! TCACCACCATCGGATGGTGG+TGG + chr5_4:61749905-61749924 Msa0862150:CDS 60.0%
CTTCCACCACCATCCGATGG+TGG - chr5_4:61749911-61749930 None:intergenic 60.0%
!! CCTGATGGTGGTGATGGGGT+TGG - chr5_4:61749956-61749975 None:intergenic 60.0%
CCAACCCCATCACCACCATC+AGG + chr5_4:61749953-61749972 Msa0862150:CDS 60.0%
!! TCTGAGGGTGGTGATGGGGT+AGG - chr5_4:61749776-61749795 None:intergenic 60.0%
ACCCCATCACCACCCTCAGA+TGG + chr5_4:61749776-61749795 Msa0862150:CDS 60.0%
CCACCATCTGAGGGTGGTGA+TGG - chr5_4:61749782-61749801 None:intergenic 60.0%
CCATCACCACCCTCAGATGG+TGG + chr5_4:61749779-61749798 Msa0862150:CDS 60.0%
! TCACCACCCTCAGATGGTGG+CGG + chr5_4:61749782-61749801 Msa0862150:CDS 60.0%
TCTGACCCAACCCCATCACC+AGG + chr5_4:61750043-61750062 Msa0862150:CDS 60.0%
!! CACCACCTGGTGATGGGGTT+GGG - chr5_4:61750051-61750070 None:intergenic 60.0%
!! TCACCACCTGGTGATGGGGT+TGG - chr5_4:61750052-61750071 None:intergenic 60.0%
ACCCCATCACCAGGTGGTGA+TGG + chr5_4:61750052-61750071 Msa0862150:CDS 60.0%
CCACCTCCTGGAGGAGTTGA+TGG - chr5_4:61750094-61750113 None:intergenic 60.0%
CCATCAACTCCTCCAGGAGG+TGG + chr5_4:61750091-61750110 Msa0862150:CDS 60.0%
! ATCGCCTGAGGGTGGTGTTG+GGG - chr5_4:61750131-61750150 None:intergenic 60.0%
CATCGCCTGAGGGTGGTGTT+GGG - chr5_4:61750132-61750151 None:intergenic 60.0%
! TCCACCAGTGGGTGGTGATG+GGG - chr5_4:61750170-61750189 None:intergenic 60.0%
CTTCCACCAGTGGGTGGTGA+TGG - chr5_4:61750172-61750191 None:intergenic 60.0%
GGTGGACAATCGCTAGCTGG+GGG - chr5_4:61750217-61750236 None:intergenic 60.0%
GGGTGGACAATCGCTAGCTG+GGG - chr5_4:61750218-61750237 None:intergenic 60.0%
GAGGGTGGACAATCGCTAGC+TGG - chr5_4:61750220-61750239 None:intergenic 60.0%
GTCGGGCTTGTAGGGTCTGA+GGG - chr5_4:61750238-61750257 None:intergenic 60.0%
TGTCGGGCTTGTAGGGTCTG+AGG - chr5_4:61750239-61750258 None:intergenic 60.0%
!! GAGGGTGTTGTCGGGCTTGT+AGG - chr5_4:61750247-61750266 None:intergenic 60.0%
! GGAGGGCTTGACGGTGTTGA+TGG - chr5_4:61750280-61750299 None:intergenic 60.0%
TCTCCTGAGGGAGGGCTTGA+CGG - chr5_4:61750289-61750308 None:intergenic 60.0%
TCAAGCCCTCCCTCAGGAGA+TGG + chr5_4:61750289-61750308 Msa0862150:CDS 60.0%
ACCCTCCATCTCCTGAGGGA+GGG - chr5_4:61750297-61750316 None:intergenic 60.0%
TACCCTCCATCTCCTGAGGG+AGG - chr5_4:61750298-61750317 None:intergenic 60.0%
CCCCCTGATGGAGGGTTTGA+TGG - chr5_4:61750379-61750398 None:intergenic 60.0%
AGTCGTAGCCCCCTGATGGA+GGG - chr5_4:61750387-61750406 None:intergenic 60.0%
GAGTCGTAGCCTCCTGATGG+TGG - chr5_4:61750451-61750470 None:intergenic 60.0%
GGTGAGTCGTAGCCTCCTGA+TGG - chr5_4:61750454-61750473 None:intergenic 60.0%
CCTCCTGATGGAGGGTTTGG+TGG - chr5_4:61750505-61750524 None:intergenic 60.0%
CCACCAAACCCTCCATCAGG+AGG + chr5_4:61750502-61750521 Msa0862150:CDS 60.0%
GAGTCGTAGCCTCCTGATGG+AGG - chr5_4:61750451-61750470 None:intergenic 60.0%
GGTGAGTCGTAGCCTCCTGA+TGG - chr5_4:61750454-61750473 None:intergenic 60.0%
CCTCCTGACGGAGGGTTTGA+TGG - chr5_4:61750634-61750653 None:intergenic 60.0%
CCATCAAACCCTCCGTCAGG+AGG + chr5_4:61750631-61750650 Msa0862150:CDS 60.0%
AGTCGTAGCCTCCTGACGGA+GGG - chr5_4:61750642-61750661 None:intergenic 60.0%
GGTGAGTCGTAGCCTCCTGA+CGG - chr5_4:61750454-61750473 None:intergenic 60.0%
! ATGGGGTGCCAGGATCGATC+GGG - chr5_4:61750852-61750871 None:intergenic 60.0%
GGGGAAAGTGGGGGTCAATG+GGG - chr5_4:61750869-61750888 None:intergenic 60.0%
GTGGGGAAAGTGGGGGTCAA+TGG - chr5_4:61750871-61750890 None:intergenic 60.0%
AGGTGGTGTGGGGAAAGTGG+GGG - chr5_4:61750878-61750897 None:intergenic 60.0%
CAGTGGGAGATGGTGCAGGA+AGG - chr5_4:61750903-61750922 None:intergenic 60.0%
CTTCCTGCACCATCTCCCAC+TGG + chr5_4:61750901-61750920 Msa0862150:CDS 60.0%
GTACCAGTGGGAGATGGTGC+AGG - chr5_4:61750907-61750926 None:intergenic 60.0%
CTAGGCTGGTGGGGAACCTT+AGG + chr5_4:61751333-61751352 Msa0862150:CDS 60.0%
CTGAGACTTGCACCGAGTCC+TGG - chr5_4:61751384-61751403 None:intergenic 60.0%
CCTCCTGAGTGGTGAGGTGG+TGG - chr5_4:61749524-61749543 None:intergenic 65.0%
CCACCACCTCACCACTCAGG+AGG + chr5_4:61749521-61749540 Msa0862150:CDS 65.0%
CCACCTCCTGAGTGGTGAGG+TGG - chr5_4:61749527-61749546 None:intergenic 65.0%
CCACCTCACCACTCAGGAGG+TGG + chr5_4:61749524-61749543 Msa0862150:CDS 65.0%
CAGCCACCTCCTGAGTGGTG+AGG - chr5_4:61749530-61749549 None:intergenic 65.0%
CACCACTCAGGAGGTGGCTG+TGG + chr5_4:61749530-61749549 Msa0862150:CDS 65.0%
GGAGGTGGCTGTGGTAGCAG+TGG + chr5_4:61749539-61749558 Msa0862150:CDS 65.0%
! GTGCCACTGCCACTAGAGGG+TGG - chr5_4:61749569-61749588 None:intergenic 65.0%
GGTGAGGACCCACTAGAGGG+TGG - chr5_4:61749593-61749612 None:intergenic 65.0%
ACCGTGACCGTGAGAGGGTG+AGG - chr5_4:61749609-61749628 None:intergenic 65.0%
CCCTCTCACGGTCACGGTCA+TGG + chr5_4:61749611-61749630 Msa0862150:CDS 65.0%
!! CCTGACGGTGGTGACGGAGT+TGG - chr5_4:61749722-61749741 None:intergenic 65.0%
CCAACTCCGTCACCACCGTC+AGG + chr5_4:61749719-61749738 Msa0862150:CDS 65.0%
CCACTGCCTGACGGTGGTGA+CGG - chr5_4:61749728-61749747 None:intergenic 65.0%
GATCCAACCCCATCACCCGG+TGG + chr5_4:61749842-61749861 Msa0862150:CDS 65.0%
!! TCACCACCGGGTGATGGGGT+TGG - chr5_4:61749848-61749867 None:intergenic 65.0%
ACCCCATCACCCGGTGGTGA+CGG + chr5_4:61749848-61749867 Msa0862150:CDS 65.0%
TCCGTCACCACCGGGTGATG+GGG - chr5_4:61749852-61749871 None:intergenic 65.0%
CTTCCGTCACCACCGGGTGA+TGG - chr5_4:61749854-61749873 None:intergenic 65.0%
!! GGGGTGGGAGTTGATGGGGT+GGG - chr5_4:61749884-61749903 None:intergenic 65.0%
!! TGGGGTGGGAGTTGATGGGG+TGG - chr5_4:61749885-61749904 None:intergenic 65.0%
GGGGTAGGAGTTGACGGGGT+CGG - chr5_4:61749995-61750014 None:intergenic 65.0%
CTTCCGCCACCATCTGAGGG+TGG - chr5_4:61750022-61750041 None:intergenic 65.0%
GACCCAACCCCATCACCAGG+TGG + chr5_4:61750046-61750065 Msa0862150:CDS 65.0%
! CCTGAGGGTGGTGTTGGGGA+TGG - chr5_4:61750127-61750146 None:intergenic 65.0%
CCATCCCCAACACCACCCTC+AGG + chr5_4:61750124-61750143 Msa0862150:CDS 65.0%
CCATCGCCTGAGGGTGGTGT+TGG - chr5_4:61750133-61750152 None:intergenic 65.0%
CCAACACCACCCTCAGGCGA+TGG + chr5_4:61750130-61750149 Msa0862150:CDS 65.0%
!! CCAGTGGGTGGTGATGGGGT+TGG - chr5_4:61750166-61750185 None:intergenic 65.0%
CCAACCCCATCACCACCCAC+TGG + chr5_4:61750163-61750182 Msa0862150:CDS 65.0%
ACCCCATCACCACCCACTGG+TGG + chr5_4:61750166-61750185 Msa0862150:CDS 65.0%
!! GCTGGGGGTGTCGATGGAGT+TGG - chr5_4:61750202-61750221 None:intergenic 65.0%
!! TCGCTAGCTGGGGGTGTCGA+TGG - chr5_4:61750208-61750227 None:intergenic 65.0%
GGGCTTGTAGGGTCTGAGGG+TGG - chr5_4:61750235-61750254 None:intergenic 65.0%
ACACCGTCAAGCCCTCCCTC+AGG + chr5_4:61750283-61750302 Msa0862150:CDS 65.0%
AGCCCTCCCTCAGGAGATGG+AGG + chr5_4:61750292-61750311 Msa0862150:CDS 65.0%
GCCCTCCCTCAGGAGATGGA+GGG + chr5_4:61750293-61750312 Msa0862150:CDS 65.0%
GAGTCGTAGCCCCCTGATGG+AGG - chr5_4:61750388-61750407 None:intergenic 65.0%
GGTGAGTCGTAGCCCCCTGA+TGG - chr5_4:61750391-61750410 None:intergenic 65.0%
GAGTCGTAGCCTCCTGACGG+AGG - chr5_4:61750643-61750662 None:intergenic 65.0%
! TGGGGTGCCAGGATCGATCG+GGG - chr5_4:61750851-61750870 None:intergenic 65.0%
CCGTCACCACCGTCAGGCAG+TGG + chr5_4:61749725-61749744 Msa0862150:CDS 70.0%
GGTAGCCCCCCGATCGATCC+TGG + chr5_4:61750841-61750860 Msa0862150:CDS 70.0%
GGGTGCCAGGATCGATCGGG+GGG - chr5_4:61750849-61750868 None:intergenic 70.0%
! GGGGTGCCAGGATCGATCGG+GGG - chr5_4:61750850-61750869 None:intergenic 70.0%
! GTGGGGGTCAATGGGGTGCC+AGG - chr5_4:61750862-61750881 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 61749048 61751839 61749048 ID=Msa0862150;Name=Msa0862150
chr5_4 mRNA 61749048 61751839 61749048 ID=Msa0862150-mRNA-1;Parent=Msa0862150;Name=Msa0862150-mRNA-1;_AED=0.20;_eAED=0.00;_QI=68|1|0.66|1|1|1|3|213|631
chr5_4 exon 61749048 61749257 61749048 ID=Msa0862150-mRNA-1:exon:19162;Parent=Msa0862150-mRNA-1
chr5_4 exon 61749510 61750932 61749510 ID=Msa0862150-mRNA-1:exon:19163;Parent=Msa0862150-mRNA-1
chr5_4 exon 61751296 61751839 61751296 ID=Msa0862150-mRNA-1:exon:19164;Parent=Msa0862150-mRNA-1
chr5_4 five_prime_UTR 61749048 61749115 61749048 ID=Msa0862150-mRNA-1:five_prime_utr;Parent=Msa0862150-mRNA-1
chr5_4 CDS 61749116 61749257 61749116 ID=Msa0862150-mRNA-1:cds;Parent=Msa0862150-mRNA-1
chr5_4 CDS 61749510 61750932 61749510 ID=Msa0862150-mRNA-1:cds;Parent=Msa0862150-mRNA-1
chr5_4 CDS 61751296 61751626 61751296 ID=Msa0862150-mRNA-1:cds;Parent=Msa0862150-mRNA-1
chr5_4 three_prime_UTR 61751627 61751839 61751627 ID=Msa0862150-mRNA-1:three_prime_utr;Parent=Msa0862150-mRNA-1
Gene Sequence

>Msa0862150

ATGGAGAAGAAAAGAAGCAACAATGCTTCTCTTACCATGTTCACAATGCTGGTTGCATTGGTTTCTCAAAACCTTGTTATTGTTCCTGTAATGGCCAAGACTCAAGCAGGAAGTTCTCCCTCAGATTTATCTACTGAACTATGTTCACATAGTCCACCACCTCACCACTCAGGAGGTGGCTGTGGTAGCAGTGGCACTCCACCCTCTAGTGGCAGTGGCACTCCACCCTCTAGTGGGTCCTCACCCTCTCACGGTCACGGTCATGGTCATGGTCATAGTCATCATGGCCATGGTCATGGATCATCATCACCCCCTTCAGGCAGTGGAAGTTACAATCCAACTCCATCAACTCCAACTCCGTCACCACCGTCAGGCAGTGGAAGTTACAGTCCAACCCCATCAACTCCTACCCCATCACCACCCTCAGATGGTGGTGGAAGTTCTGATCCAACCCCATCAACTCCCCCAAATTGTGATCCAACCCCATCACCCGGTGGTGACGGAAGTTACAGTCCCACCCCATCAACTCCCACCCCATCACCACCATCGGATGGTGGTGGAAGTTACAATCCAACACCATCAACTCCAACCCCATCACCACCATCAGGTAGTGGAAGTTACACTCCGACCCCGTCAACTCCTACCCCATCACCACCCTCAGATGGTGGCGGAAGTTCTGACCCAACCCCATCACCAGGTGGTGATGGAAGTTACACTCCAACTCCATCAACTCCTCCAGGAGGTGGAAGTTATGATCCATCCCCAACACCACCCTCAGGCGATGGAAGTTATAATCCAACCCCATCACCACCCACTGGTGGAAGTTACACTCCAACTCCATCGACACCCCCAGCTAGCGATTGTCCACCCTCAGACCCTACAAGCCCGACAACACCCTCAGACCCAACACCATCAACACCGTCAAGCCCTCCCTCAGGAGATGGAGGGTACTATAACTCACCACCACAAGATCCTACAAGCCCAACAACACCCTCAACTCCAACAACCCCATCAAACCCTCCATCAGGGGGCTACGACTCACCACCATCAGACCCTATAACCCCAACAACACCATCAAACCCACCATCAGGAGGCTACGACTCACCACCATCAAACCCTATAACCCCAACAACACCACCAAACCCTCCATCAGGAGGCTACGACTCACCACCATCAGACCCTATAACCCCAACAACACCATCAAACCCTCCATCAGGAGGTTACTATAACTCACCACCACAAGACCCTATAACCCCTACAACACCATCAAACCCTCCGTCAGGAGGCTACGACTCACCACCAACAGACCCTTTAACCCCAACAACACCATCAAATCCTCCATCAGGAGGGTACTACAACTCACCACCACAAGACCCTATAACCCCAACAACACCATCAAACCCTTTAACCCCGACAACACCATCAAACCCTCCATCAGGAGGGTACTACAACTCACCACCAACTTATGGAAGTGGTAGCCCCCCGATCGATCCTGGCACCCCATTGACCCCCACTTTCCCCACACCACCTTTCCTTCCTGCACCATCTCCCACTGGTACATGCAACTACTGGAATACTCACCCACAACTCATCTGGGGATTACTAGGCTGGTGGGGAACCTTAGGCAATGCTTTTGGTGTGCATAGTCTGCCAGGACTCGGTGCAAGTCTCAGCATTCCACAAGCACTTTCCAACACAAGAACTGATGCGCTCGGAGCACTTTACAGAGAAGGTGCAGCTTCTTATCTTAACTCCTTGGTGAACAACAAGTTCCCTTACACAACTGATCAAGTCAGAGACAGATTTGTAGCATCACTCAGCTCAAATAAGGCTGCAGCAACACAAGCACATCTTTTCCAGATGGCCAATGAGGGAAAAATTAAGCCTAGAGCATGA
Protein sequence

>Msa0862150

MEKKRSNNASLTMFTMLVALVSQNLVIVPVMAKTQAGSSPSDLSTELCSHSPPPHHSGGGCGSSGTPPSSGSGTPPSSGSSPSHGHGHGHGHSHHGHGHGSSSPPSGSGSYNPTPSTPTPSPPSGSGSYSPTPSTPTPSPPSDGGGSSDPTPSTPPNCDPTPSPGGDGSYSPTPSTPTPSPPSDGGGSYNPTPSTPTPSPPSGSGSYTPTPSTPTPSPPSDGGGSSDPTPSPGGDGSYTPTPSTPPGGGSYDPSPTPPSGDGSYNPTPSPPTGGSYTPTPSTPPASDCPPSDPTSPTTPSDPTPSTPSSPPSGDGGYYNSPPQDPTSPTTPSTPTTPSNPPSGGYDSPPSDPITPTTPSNPPSGGYDSPPSNPITPTTPPNPPSGGYDSPPSDPITPTTPSNPPSGGYYNSPPQDPITPTTPSNPPSGGYDSPPTDPLTPTTPSNPPSGGYYNSPPQDPITPTTPSNPLTPTTPSNPPSGGYYNSPPTYGSGSPPIDPGTPLTPTFPTPPFLPAPSPTGTCNYWNTHPQLIWGLLGWWGTLGNAFGVHSLPGLGASLSIPQALSNTRTDALGALYREGAASYLNSLVNNKFPYTTDQVRDRFVASLSSNKAAATQAHLFQMANEGKIKPRA*