AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0746400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0746400 MtrunA17_Chr4g0075971 91.860 602 49 0 1 602 1 602 0.0 1118
Msa0746400 MtrunA17_Chr4g0075861 92.493 373 28 0 1 373 1 373 0.0 692
Msa0746400 MtrunA17_Chr3g0077801 68.300 347 106 2 256 599 4 349 3.97e-166 477
Msa0746400 MtrunA17_Chr3g0077901 64.873 353 122 1 251 601 19 371 5.35e-163 470
Msa0746400 MtrunA17_Chr3g0077851 66.866 335 109 1 269 601 1 335 3.09e-158 456
Msa0746400 MtrunA17_Chr6g0488101 52.667 450 186 9 175 602 11 455 8.17e-153 447
Msa0746400 MtrunA17_Chr6g0488271 53.333 420 176 8 198 602 1 415 9.03e-145 425
Msa0746400 MtrunA17_Chr3g0112311 61.453 358 123 5 254 600 2 355 1.66e-137 404
Msa0746400 MtrunA17_Chr7g0252101 53.153 444 180 12 167 602 9 432 1.17e-132 395
Msa0746400 MtrunA17_Chr7g0243331 60.000 350 134 4 255 601 3 349 1.21e-129 384
Msa0746400 MtrunA17_Chr1g0207351 59.091 352 133 5 259 602 18 366 1.37e-126 377
Msa0746400 MtrunA17_Chr3g0093911 57.790 353 141 5 254 602 2 350 4.53e-123 367
Msa0746400 MtrunA17_Chr6g0452641 60.772 311 106 4 304 602 34 340 4.64e-112 338
Msa0746400 MtrunA17_Chr3g0122991 51.393 323 97 4 256 568 3 275 9.81e-99 302
Msa0746400 MtrunA17_Chr1g0209051 57.196 271 112 2 334 601 1 270 3.00e-93 287
Msa0746400 MtrunA17_Chr3g0123471 58.712 264 101 5 334 594 1 259 3.11e-89 276
Msa0746400 MtrunA17_Chr2g0328701 95.413 109 5 0 1 109 18 126 4.37e-70 222
Msa0746400 MtrunA17_Chr2g0328701 39.623 106 54 3 89 192 29 126 9.36e-12 62.8
Msa0746400 MtrunA17_Chr2g0328701 45.588 68 34 1 175 242 32 96 4.59e-11 60.8
Msa0746400 MtrunA17_Chr7g0243391 55.446 202 88 1 261 462 26 225 4.15e-57 192
Msa0746400 MtrunA17_Chr1g0202841 54.696 181 72 3 428 601 1 178 5.05e-50 171
Msa0746400 MtrunA17_Chr6g0486591 52.830 159 64 3 455 602 1 159 9.85e-48 164
Msa0746400 MtrunA17_Chr1g0196231 43.049 223 111 5 174 395 159 366 4.87e-41 152
Msa0746400 MtrunA17_Chr1g0206951 66.372 113 37 1 255 366 1 113 1.04e-39 141
Msa0746400 MtrunA17_Chr1g0187941 53.435 131 58 1 433 560 6 136 7.35e-36 131
Msa0746400 MtrunA17_Chr1g0205821 42.767 159 88 1 89 244 13 171 3.71e-33 125
Msa0746400 MtrunA17_Chr1g0205821 43.103 174 87 4 1 163 1 173 3.21e-30 117
Msa0746400 MtrunA17_Chr3g0077941 45.614 171 85 4 83 245 2 172 1.92e-31 120
Msa0746400 MtrunA17_Chr3g0077941 41.611 149 77 2 25 163 25 173 2.74e-26 105
Msa0746400 MtrunA17_Chr3g0077891 44.186 172 87 4 83 245 2 173 4.10e-31 119
Msa0746400 MtrunA17_Chr3g0077891 43.056 144 71 2 25 157 25 168 6.32e-27 107
Msa0746400 MtrunA17_Chr3g0077911 45.752 153 77 3 12 158 8 160 7.27e-31 118
Msa0746400 MtrunA17_Chr3g0077911 46.497 157 76 5 89 241 8 160 2.93e-28 110
Msa0746400 MtrunA17_Chr3g0077861 46.405 153 76 3 12 158 8 160 1.28e-30 117
Msa0746400 MtrunA17_Chr3g0077861 43.827 162 85 3 83 241 2 160 1.72e-27 108
Msa0746400 MtrunA17_Chr3g0077861 46.575 73 35 1 12 80 90 162 6.22e-12 64.3
Msa0746400 MtrunA17_Chr7g0238781 47.761 134 68 2 285 418 27 158 5.27e-30 115
Msa0746400 MtrunA17_Chr7g0218891 33.191 235 146 5 20 244 26 259 6.78e-30 119
Msa0746400 MtrunA17_Chr7g0218891 36.301 146 87 2 25 164 117 262 1.52e-20 92.0
Msa0746400 MtrunA17_Chr7g0218891 34.270 178 105 6 90 256 14 190 8.29e-19 87.0
Msa0746400 MtrunA17_Chr1g0206771 41.772 158 78 2 88 240 15 163 5.33e-29 113
Msa0746400 MtrunA17_Chr1g0206771 44.595 148 72 3 13 154 17 160 1.82e-26 106
Msa0746400 MtrunA17_Chr1g0206771 47.222 72 35 1 8 76 91 162 1.06e-12 67.0
Msa0746400 MtrunA17_Chr3g0077881 43.114 167 86 4 83 240 2 168 9.51e-28 110
Msa0746400 MtrunA17_Chr3g0077881 42.282 149 74 4 25 162 25 172 3.35e-27 108
Msa0746400 MtrunA17_Chr1g0205831 40.789 152 78 2 93 244 6 145 3.04e-26 105
Msa0746400 MtrunA17_Chr1g0205831 40.559 143 76 2 25 167 18 151 5.56e-23 96.7
Msa0746400 MtrunA17_Chr1g0209191 54.082 98 39 1 510 601 1 98 1.32e-25 101
Msa0746400 MtrunA17_Chr1g0196241 70.833 72 20 1 501 571 3 74 3.86e-25 99.4
Msa0746400 MtrunA17_Chr6g0459061 26.347 334 235 7 270 598 27 354 3.88e-25 107
Msa0746400 MtrunA17_Chr1g0209201 40.141 142 80 2 1 140 5 143 3.71e-24 98.6
Msa0746400 MtrunA17_Chr1g0209201 35.766 137 75 4 89 222 16 142 4.67e-16 75.5
Msa0746400 MtrunA17_Chr1g0209201 47.692 65 33 1 175 239 19 82 1.74e-12 65.1
Msa0746400 MtrunA17_Chr5g0415031 40.000 160 87 2 2 152 33 192 1.02e-23 106
Msa0746400 MtrunA17_Chr5g0415031 35.185 162 100 2 79 235 31 192 9.45e-21 97.4
Msa0746400 MtrunA17_Chr5g0415031 51.899 79 38 0 175 253 46 124 1.16e-15 81.3
Msa0746400 MtrunA17_Chr8g0364231 39.766 171 86 3 11 164 41 211 3.02e-23 105
Msa0746400 MtrunA17_Chr8g0364231 35.256 156 98 2 83 235 36 191 3.19e-19 92.4
Msa0746400 MtrunA17_Chr8g0364231 52.564 78 35 1 167 242 35 112 3.18e-15 79.7
Msa0746400 MtrunA17_Chr6g0452001 39.375 160 87 3 3 152 53 212 6.13e-21 97.8
Msa0746400 MtrunA17_Chr6g0452001 34.615 156 99 1 83 235 57 212 6.94e-18 88.2
Msa0746400 MtrunA17_Chr6g0452001 52.632 76 34 1 168 241 57 132 8.27e-14 75.1
Msa0746400 MtrunA17_Chr6g0452021 39.189 148 83 2 12 152 43 190 1.09e-19 92.4
Msa0746400 MtrunA17_Chr6g0452021 35.484 155 95 3 84 235 38 190 4.18e-17 84.3
Msa0746400 MtrunA17_Chr6g0452021 59.701 67 27 0 175 241 46 112 6.99e-15 77.4
Msa0746400 MtrunA17_Chr1g0209061 43.697 119 42 4 175 292 13 107 6.08e-18 79.7
Msa0746400 MtrunA17_Chr1g0206781 53.030 66 31 0 175 240 14 79 4.02e-15 72.0
Msa0746400 MtrunA17_Chr1g0206781 35.433 127 59 1 81 207 3 106 9.35e-15 70.9
Msa0746400 MtrunA17_Chr1g0206781 39.130 115 47 2 13 124 12 106 6.33e-14 68.6
Msa0746400 MtrunA17_Chr1g0205861 49.315 73 37 0 85 157 12 84 8.01e-15 71.2
Msa0746400 MtrunA17_Chr1g0205861 40.244 82 46 1 162 240 3 84 1.39e-12 64.7
Msa0746400 MtrunA17_Chr1g0205811 50.000 70 35 0 175 244 17 86 5.31e-14 68.9
Msa0746400 MtrunA17_Chr1g0205811 37.634 93 58 0 82 174 7 99 3.36e-13 66.6
Msa0746400 MtrunA17_Chr1g0205811 50.000 60 30 0 25 84 30 89 8.65e-12 62.8
Msa0746400 MtrunA17_Chr8g0364021 39.785 93 54 1 83 175 38 128 7.58e-14 71.6
Msa0746400 MtrunA17_Chr1g0205801 36.364 99 63 0 89 187 12 110 4.10e-13 66.2
Msa0746400 MtrunA17_Chr1g0205801 42.857 70 40 0 175 244 15 84 1.18e-11 62.0
Msa0746400 MtrunA17_Chr7g0218911 44.776 67 37 0 176 242 2 68 4.87e-12 63.2
Msa0746400 MtrunA17_Chr7g0218911 39.474 76 45 1 25 99 14 89 5.56e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0746400 AT1G24190.1 39.735 151 82 2 11 152 13 163 5.98e-23 104
Msa0746400 AT1G24190.1 32.919 161 99 2 81 235 6 163 2.28e-17 87.0
Msa0746400 AT1G24190.1 35.152 165 85 4 175 326 17 172 2.73e-13 73.9
Msa0746400 AT1G24190.2 39.735 151 82 2 11 152 13 163 6.08e-23 104
Msa0746400 AT1G24190.2 32.919 161 99 2 81 235 6 163 2.30e-17 87.0
Msa0746400 AT1G24190.2 35.152 165 85 4 175 326 17 172 2.90e-13 73.9
Msa0746400 AT1G24190.3 39.735 151 82 2 11 152 13 163 6.38e-23 104
Msa0746400 AT1G24190.3 32.919 161 99 2 81 235 6 163 2.03e-17 87.0
Msa0746400 AT1G24190.3 35.152 165 85 4 175 326 17 172 2.79e-13 73.9
Msa0746400 AT1G70060.2 38.750 160 88 2 3 152 5 164 9.07e-22 100
Msa0746400 AT1G70060.2 33.333 159 102 1 81 235 6 164 1.18e-16 84.7
Msa0746400 AT1G70060.2 54.286 70 32 0 175 244 17 86 1.24e-12 71.6
Msa0746400 AT1G70060.1 38.750 160 88 2 3 152 5 164 9.07e-22 100
Msa0746400 AT1G70060.1 33.333 159 102 1 81 235 6 164 1.18e-16 84.7
Msa0746400 AT1G70060.1 54.286 70 32 0 175 244 17 86 1.24e-12 71.6
Msa0746400 AT3G01320.1 40.268 149 81 2 11 151 56 204 3.04e-21 99.4
Msa0746400 AT3G01320.1 33.766 154 100 1 83 234 51 204 1.56e-16 84.3
Msa0746400 AT3G01320.1 55.263 76 32 1 168 241 51 126 1.19e-15 81.6
Msa0746400 AT3G01320.2 40.268 149 81 2 11 151 56 204 3.19e-21 99.4
Msa0746400 AT3G01320.2 33.766 154 100 1 83 234 51 204 1.55e-16 84.3
Msa0746400 AT3G01320.2 55.263 76 32 1 168 241 51 126 1.24e-15 81.3
Msa0746400 AT1G59890.2 39.752 161 87 3 12 162 45 205 1.12e-20 97.4
Msa0746400 AT1G59890.2 37.162 148 92 1 89 235 45 192 2.58e-17 86.7
Msa0746400 AT1G59890.2 40.385 104 56 2 175 278 48 145 1.95e-11 67.8
Msa0746400 AT1G59890.4 39.752 161 87 3 12 162 45 205 1.14e-20 97.4
Msa0746400 AT1G59890.4 37.162 148 92 1 89 235 45 192 2.64e-17 86.7
Msa0746400 AT1G59890.4 40.385 104 56 2 175 278 48 145 2.08e-11 67.8
Msa0746400 AT1G59890.3 39.752 161 87 3 12 162 45 205 1.15e-20 97.4
Msa0746400 AT1G59890.3 37.162 148 92 1 89 235 45 192 2.60e-17 86.7
Msa0746400 AT1G59890.3 40.385 104 56 2 175 278 48 145 2.03e-11 67.8
Msa0746400 AT1G59890.1 39.752 161 87 3 12 162 45 205 1.17e-20 97.4
Msa0746400 AT1G59890.1 37.162 148 92 1 89 235 45 192 2.51e-17 86.7
Msa0746400 AT1G59890.1 40.385 104 56 2 175 278 48 145 1.93e-11 67.8
Msa0746400 AT5G15020.2 38.926 149 84 2 11 152 51 199 2.36e-20 96.7
Msa0746400 AT5G15020.2 34.416 154 100 1 83 235 46 199 6.17e-18 89.0
Msa0746400 AT5G15020.2 51.316 76 35 1 168 241 46 121 1.45e-13 74.7
Msa0746400 AT5G15020.1 38.926 149 84 2 11 152 51 199 2.46e-20 96.3
Msa0746400 AT5G15020.1 34.416 154 100 1 83 235 46 199 6.40e-18 88.6
Msa0746400 AT5G15020.1 51.316 76 35 1 168 241 46 121 1.54e-13 74.7
Msa0746400 AT1G24230.1 32.370 173 102 4 89 260 14 172 1.48e-19 89.0
Msa0746400 AT1G24230.1 26.667 225 150 4 11 230 13 227 1.07e-17 83.6
Msa0746400 AT1G10450.3 34.759 187 114 3 12 191 84 269 4.47e-19 92.4
Msa0746400 AT1G10450.3 37.838 148 89 2 89 234 84 230 4.46e-18 89.4
Msa0746400 AT1G10450.3 49.254 67 34 0 175 241 87 153 2.02e-11 67.8
Msa0746400 AT1G10450.2 34.759 187 114 3 12 191 33 218 6.26e-19 92.0
Msa0746400 AT1G10450.2 37.838 148 89 2 89 234 33 179 5.03e-18 89.0
Msa0746400 AT1G10450.2 49.254 67 34 0 175 241 36 102 2.17e-11 67.8
Msa0746400 AT1G10450.1 34.759 187 114 3 12 191 33 218 6.26e-19 92.0
Msa0746400 AT1G10450.1 37.838 148 89 2 89 234 33 179 5.03e-18 89.0
Msa0746400 AT1G10450.1 49.254 67 34 0 175 241 36 102 2.17e-11 67.8
Msa0746400 AT1G27260.1 34.615 156 91 3 90 236 4 157 4.61e-17 80.9
Msa0746400 AT1G27260.1 31.210 157 95 2 13 156 4 160 6.50e-14 72.0
Msa0746400 AT1G70030.1 34.416 154 87 5 12 155 11 160 3.07e-16 77.0
Msa0746400 AT1G70030.1 33.333 159 97 4 81 234 3 157 2.33e-14 71.6
Msa0746400 AT1G24200.1 35.570 149 90 2 89 234 14 159 7.56e-16 77.0
Msa0746400 AT1G24200.1 34.694 147 90 2 11 151 13 159 2.18e-15 75.5
Msa0746400 AT1G24200.1 39.000 100 54 2 167 264 7 101 3.44e-12 66.2
Msa0746400 AT1G27280.1 31.737 167 106 3 100 258 4 170 9.13e-15 74.3
Msa0746400 AT1G24250.1 30.508 177 94 4 10 157 12 188 9.61e-15 75.1
Msa0746400 AT1G24250.1 28.235 170 97 4 88 233 13 181 1.43e-11 65.5
Msa0746400 AT1G23810.1 29.944 177 106 3 2 160 4 180 1.55e-14 73.9
Msa0746400 AT1G23810.1 30.189 159 97 4 88 233 13 170 8.22e-13 68.9
Msa0746400 AT5G35610.1 36.283 113 62 2 176 281 14 123 2.96e-13 68.2
Msa0746400 AT5G15025.1 45.349 86 43 2 2 83 36 121 6.87e-12 63.2
Msa0746400 AT5G15025.1 50.000 70 35 0 175 244 50 119 7.94e-12 63.2
Msa0746400 AT1G70030.2 33.333 147 66 6 12 155 22 139 7.24e-12 63.9
Msa0746400 AT4G12020.11 51.515 66 31 1 176 241 312 376 7.22e-11 65.9
Msa0746400 AT4G12020.1 51.515 66 31 1 176 241 312 376 8.47e-11 65.9
Msa0746400 AT4G12020.9 51.515 66 31 1 176 241 312 376 8.47e-11 65.9
Msa0746400 AT4G12020.4 51.515 66 31 1 176 241 312 376 8.53e-11 65.9
Msa0746400 AT4G12020.2 51.515 66 31 1 176 241 312 376 8.91e-11 65.9
Msa0746400 AT4G12020.7 51.515 66 31 1 176 241 312 376 8.98e-11 65.9
Msa0746400 AT4G12020.3 51.515 66 31 1 176 241 312 376 9.05e-11 65.9
Msa0746400 AT4G12020.10 51.515 66 31 1 176 241 312 376 9.13e-11 65.9
Msa0746400 AT4G12020.6 51.515 66 31 1 176 241 312 376 9.20e-11 65.9
Msa0746400 AT4G12020.8 51.515 66 31 1 176 241 312 376 9.20e-11 65.9
Msa0746400 AT1G24220.2 25.818 275 156 8 3 252 5 256 9.61e-11 65.5
Msa0746400 AT1G24220.1 25.818 275 156 8 3 252 5 256 9.61e-11 65.5
Msa0746400 AT4G12020.5 51.515 66 31 1 176 241 245 309 9.65e-11 65.9

Find 112 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCAAAATTAAATGTTTA+TGG 0.087759 5_1:-68557829 None:intergenic
AGACCATACAAATTTAATTT+TGG 0.091325 5_1:+68558315 Msa0746400:CDS
AGGCCATAAACATTTAATTT+TGG 0.093733 5_1:+68557826 Msa0746400:CDS
TTCTGGCACTTTGCATATTC+TGG 0.140245 5_1:+68561656 Msa0746400:CDS
GTTTATCAATCTCGAAATTT+TGG 0.149964 5_1:+68561884 Msa0746400:CDS
ACCTTCTTTCTTCTCCTAAA+TGG 0.179169 5_1:-68561737 None:intergenic
TTGAAGTCTACTCCAATTAT+TGG 0.189002 5_1:-68562524 None:intergenic
CAAAGATGATCAATTATTTC+TGG 0.210256 5_1:+68561639 Msa0746400:CDS
GATGTATTGGAGAGATTTCT+TGG 0.258709 5_1:+68561526 Msa0746400:CDS
AATGTGAATCCGTATCTTTC+TGG 0.260796 5_1:-68558106 None:intergenic
GGGCATGTCGATTTACTTTC+GGG 0.267983 5_1:+68558067 Msa0746400:CDS
ATTGCGATGAAGCTATTTAA+AGG 0.296597 5_1:+68558046 Msa0746400:CDS
AGTATGATTTCATAATTCTT+TGG 0.310501 5_1:-68557866 None:intergenic
TGTGGTTCATACCAAGTCTA+TGG 0.311544 5_1:+68562114 Msa0746400:CDS
AGAGTGCATGAGTTGTTTAA+AGG 0.320962 5_1:+68557806 Msa0746400:CDS
TTTCAACTTGACATACTTCA+TGG 0.321469 5_1:-68562170 None:intergenic
AGGGCATGTCGATTTACTTT+CGG 0.325603 5_1:+68558066 Msa0746400:CDS
CAGGGAACTATCAACTTTCT+TGG 0.330236 5_1:+68561414 Msa0746400:CDS
GTCATCAAAGTCTAGAGATT+TGG 0.331846 5_1:-68561456 None:intergenic
CTTTCATAACCCCACATGTT+CGG 0.334790 5_1:-68562253 None:intergenic
CAGAAGTCATGAGTGATTAC+AGG 0.353321 5_1:+68557750 Msa0746400:CDS
TTTCATAACCCCACATGTTC+GGG 0.364907 5_1:-68562252 None:intergenic
ATCCCAAAATTAAATTTGTA+TGG 0.371343 5_1:-68558318 None:intergenic
GAACGATAAACTTGTTGGTT+AGG 0.372838 5_1:-68561617 None:intergenic
GGGCATTTCATAAGATGTAT+TGG 0.386928 5_1:+68561513 Msa0746400:CDS
TCTTTGAACGATAAACTTGT+TGG 0.391219 5_1:-68561622 None:intergenic
TTGCGATGAAGCTATTTAAA+GGG 0.398600 5_1:+68558047 Msa0746400:CDS
TATGTCAAGTTGAAAACTTT+GGG 0.415747 5_1:+68562178 Msa0746400:CDS
TTGCTTGTGTGTGTAAGAAT+TGG 0.421391 5_1:+68561489 Msa0746400:CDS
GGGCACATGAGAAGGTAATA+TGG 0.425769 5_1:-68562586 None:intergenic
ACTCTTGCTTTGACACCTCT+TGG 0.426483 5_1:-68557788 None:intergenic
CAAAATGCAAAGTGTATGTA+GGG 0.426712 5_1:+68562308 Msa0746400:CDS
ACAAGCTGCCAAAGTACATT+AGG 0.428568 5_1:+68562338 Msa0746400:CDS
TCATGGCAATGAAGCTCAAA+TGG 0.432218 5_1:-68558379 None:intergenic
AGTTGTGTTTCAAGATAAGA+TGG 0.435039 5_1:+68557949 Msa0746400:CDS
CATTGCATTATTATATGCTC+CGG 0.435194 5_1:+68562204 Msa0746400:CDS
AGGGAACTATCAACTTTCTT+GGG 0.435308 5_1:+68561415 Msa0746400:CDS
AAAATTGACTTTAAAGGTTG+GGG 0.437076 5_1:-68561768 None:intergenic
TAACTTCTTTGTCGCGCCTA+AGG 0.438182 5_1:+68562065 Msa0746400:CDS
TGGGTTACTTATTCAACAAT+GGG 0.440934 5_1:+68561908 Msa0746400:CDS
TTGGTTAGGTATGCTGATAA+AGG 0.451302 5_1:-68561603 None:intergenic
ACAAAATGCAAAGTGTATGT+AGG 0.455850 5_1:+68562307 Msa0746400:CDS
AGTGGATATTTGATCATGAC+AGG 0.457131 5_1:+68561686 Msa0746400:CDS
AATGAAAATTCATACCTGAT+TGG 0.458500 5_1:-68556914 None:intergenic
GAGCTTCATTGCCATGAGAC+TGG 0.471478 5_1:+68558385 Msa0746400:CDS
AGCCACTAAGACAAAATCCT+TGG 0.472342 5_1:-68561834 None:intergenic
AGCCGTGTTTCATGATAAGT+TGG 0.480965 5_1:+68558198 Msa0746400:CDS
TCGCAATAAACCCACTGATC+GGG 0.481249 5_1:-68556776 None:intergenic
TTCTTTGTCGCGCCTAAGGT+TGG 0.489388 5_1:+68562069 Msa0746400:CDS
CGGCAGACACCAAAGGAACT+AGG 0.501828 5_1:-68556840 None:intergenic
GTATGTCAAGTTGAAAACTT+TGG 0.511075 5_1:+68562177 Msa0746400:CDS
AGTGTGATTTGATGTTCCTC+TGG 0.511878 5_1:-68558355 None:intergenic
GCATATTCTGGATCTTCTAG+TGG 0.514037 5_1:+68561668 Msa0746400:CDS
TTGGGTTACTTATTCAACAA+TGG 0.515244 5_1:+68561907 Msa0746400:CDS
CGTCACAACTAACCAACCTT+AGG 0.518704 5_1:-68562081 None:intergenic
TCATGTGACCTAATGTACTT+TGG 0.520097 5_1:-68562346 None:intergenic
ATCGCAATAAACCCACTGAT+CGG 0.526426 5_1:-68556777 None:intergenic
ACAAAGTCAACAATCATCCA+TGG 0.526718 5_1:-68561935 None:intergenic
TACTTCTTGCCAGAAAGATA+CGG 0.529766 5_1:+68558097 Msa0746400:CDS
GTCAACGACAAGGGCAACAT+AGG 0.530388 5_1:+68561983 Msa0746400:CDS
CAAGGCTCAAGGAATTGATA+CGG 0.538557 5_1:+68558258 Msa0746400:CDS
TCCATTTAGGAGAAGAAAGA+AGG 0.539421 5_1:+68561736 Msa0746400:CDS
CCACATGTTCGGGTTGCTCA+AGG 0.539860 5_1:-68562242 None:intergenic
TAAAAGAAAATCAGCGGCAG+CGG 0.540117 5_1:-68556860 None:intergenic
ACACACAAGCAAATTGAAAG+AGG 0.547191 5_1:-68561478 None:intergenic
CTTGTGTGTGTAAGAATTGG+AGG 0.551053 5_1:+68561492 Msa0746400:CDS
TGTTTATGATCTTGCAACAG+TGG 0.557427 5_1:-68558130 None:intergenic
TGAAATCATACTTCCTCCAT+CGG 0.558415 5_1:+68557877 Msa0746400:CDS
AATTGATACGGGAGGTGTTG+CGG 0.560033 5_1:+68558270 Msa0746400:CDS
TTCATACTACAAGACCCTAC+TGG 0.561934 5_1:+68562374 Msa0746400:CDS
CCTTGAGCAACCCGAACATG+TGG 0.567823 5_1:+68562242 Msa0746400:CDS
ATTGCATTATTATATGCTCC+GGG 0.570402 5_1:+68562205 Msa0746400:CDS
CAAGACCCTACTGGTTGGAC+TGG 0.573914 5_1:+68562383 Msa0746400:CDS
GCGGCAGCGGCAGACACCAA+AGG 0.577737 5_1:-68556847 None:intergenic
GTCATGAGTGATTACAGGGA+TGG 0.580278 5_1:+68557755 Msa0746400:CDS
ATCAAACAAAGCATCGCTTG+TGG 0.584167 5_1:-68557666 None:intergenic
TACTACAAGACCCTACTGGT+TGG 0.586463 5_1:+68562378 Msa0746400:CDS
AAAAGACCAGTCCAACCAGT+AGG 0.594037 5_1:-68562389 None:intergenic
AACGCAGATCAAAAGCTACA+TGG 0.594334 5_1:-68562468 None:intergenic
TCAACGACAAGGGCAACATA+GGG 0.594974 5_1:+68561984 Msa0746400:CDS
ATTAAATGCCACCATAGACT+TGG 0.597479 5_1:-68562125 None:intergenic
ATCACAAATCACAAGGCTCA+AGG 0.601072 5_1:+68558247 Msa0746400:CDS
AAGGCTCAAGGAATTGATAC+GGG 0.604072 5_1:+68558259 Msa0746400:CDS
AAAGACCAGTCCAACCAGTA+GGG 0.607927 5_1:-68562388 None:intergenic
TTCCAACTTATCATGAAACA+CGG 0.609205 5_1:-68558200 None:intergenic
CTCATCATATCCCGATCAGT+GGG 0.609425 5_1:+68556766 Msa0746400:five_prime_UTR
TTGATGTTCCTCTGGCAGCA+AGG 0.614555 5_1:-68558347 None:intergenic
TAAACTACTAACCAGTCTCA+TGG 0.620534 5_1:-68558396 None:intergenic
CAAAGTCAACAATCATCCAT+GGG 0.622007 5_1:-68561934 None:intergenic
CTTGAGCAACCCGAACATGT+GGG 0.625028 5_1:+68562243 Msa0746400:CDS
ACTCATCATATCCCGATCAG+TGG 0.627863 5_1:+68556765 Msa0746400:five_prime_UTR
AGAAGTCATGAGTGATTACA+GGG 0.629088 5_1:+68557751 Msa0746400:CDS
CGCGACAAAGAAGTTACGCT+AGG 0.633955 5_1:-68562058 None:intergenic
ATTCAACAATGGGATACCCA+TGG 0.636286 5_1:+68561918 Msa0746400:CDS
AAGAGATAAAAGAAAATCAG+CGG 0.638548 5_1:-68556866 None:intergenic
ATTCAATGCCTTGCTGCCAG+AGG 0.639665 5_1:+68558339 Msa0746400:CDS
ACAAGTTATCACAAATCACA+AGG 0.640420 5_1:+68558240 Msa0746400:CDS
TATATATGTTGTCAACGACA+AGG 0.653477 5_1:+68561973 Msa0746400:CDS
TGTCAAAAGCAAGCAAGACA+CGG 0.654737 5_1:-68561805 None:intergenic
CTGTTGCAAGATCATAAACA+AGG 0.655865 5_1:+68558133 Msa0746400:CDS
GAGATTTGGAAATGATATCG+AGG 0.657764 5_1:-68561442 None:intergenic
TTGAGCAACCCGAACATGTG+GGG 0.659897 5_1:+68562244 Msa0746400:CDS
ATATATGTTGTCAACGACAA+GGG 0.666270 5_1:+68561974 Msa0746400:CDS
TTGTGTGTGTAAGAATTGGA+GGG 0.670781 5_1:+68561493 Msa0746400:CDS
GGTTCATACCAAGTCTATGG+TGG 0.672324 5_1:+68562117 Msa0746400:CDS
AAGGCATAGTAGTTTCCACC+CGG 0.674044 5_1:-68562223 None:intergenic
AAAATGCAAAGTGTATGTAG+GGG 0.684341 5_1:+68562309 Msa0746400:CDS
GCATTATTATATGCTCCGGG+TGG 0.696983 5_1:+68562208 Msa0746400:CDS
GCTCAAGGAATTGATACGGG+AGG 0.704641 5_1:+68558262 Msa0746400:CDS
GTGGATATTTGATCATGACA+GGG 0.707619 5_1:+68561687 Msa0746400:CDS
GATGGACGAATTGATCCAAG+AGG 0.740587 5_1:+68557773 Msa0746400:CDS
ACTGATCGGGATATGATGAG+TGG 0.752974 5_1:-68556763 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATTAAATTGAATTTAT+TGG + chr5_1:68556964-68556983 Msa0746400:intron 10.0%
!! AAATTCAACAATATAAATAA+TGG - chr5_1:68557369-68557388 None:intergenic 10.0%
!!! ATTAATGTAAAATATGTTTT+AGG + chr5_1:68557508-68557527 Msa0746400:intron 10.0%
!!! AAAATATGTTTTTAAAGTTT+TGG + chr5_1:68557550-68557569 Msa0746400:intron 10.0%
!!! AAATATGTTTTTAAAGTTTT+GGG + chr5_1:68557551-68557570 Msa0746400:intron 10.0%
!!! CATAATTTTGTTAAAAATTT+TGG + chr5_1:68559817-68559836 Msa0746400:intron 10.0%
!! AAAAAAAAAAAAAAAAGACA+TGG - chr5_1:68560873-68560892 None:intergenic 10.0%
!! TAAAGCCTATTTAATTAAAT+AGG + chr5_1:68557306-68557325 Msa0746400:intron 15.0%
!! TATAGCCTATTTAATTAAAT+AGG - chr5_1:68557314-68557333 None:intergenic 15.0%
!!! ATAAATAATGGAAGATATAT+GGG - chr5_1:68557357-68557376 None:intergenic 15.0%
!!! TATAAATAATGGAAGATATA+TGG - chr5_1:68557358-68557377 None:intergenic 15.0%
!!! TATGTTTTAAATAGATTTTC+AGG + chr5_1:68557623-68557642 Msa0746400:intron 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr5_1:68559365-68559384 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr5_1:68559364-68559383 Msa0746400:intron 15.0%
!! AAACTAAAGTAAAAAGATAA+GGG + chr5_1:68559365-68559384 Msa0746400:intron 15.0%
!!! TTAATTTTATTAGTGTTTTG+TGG - chr5_1:68560010-68560029 None:intergenic 15.0%
!! CAAAACACTAATAAAATTAA+AGG + chr5_1:68560010-68560029 Msa0746400:intron 15.0%
!! ACATTATTATAGATAAAGAA+TGG - chr5_1:68560109-68560128 None:intergenic 15.0%
!! TTATGAAACTGAAATTTAAT+AGG - chr5_1:68560701-68560720 None:intergenic 15.0%
!!! ATCATTTTAGTATCTTTTTT+TGG + chr5_1:68560762-68560781 Msa0746400:intron 15.0%
!!! TTGTTAATATTTTATGCTTT+CGG + chr5_1:68560916-68560935 Msa0746400:intron 15.0%
!!! ATAAGAAAAATTGACTTTAA+AGG - chr5_1:68561777-68561796 None:intergenic 15.0%
!! AGAAAGATAAAAACAAAAAG+TGG - chr5_1:68556894-68556913 None:intergenic 20.0%
!!! AATCAGTTGATATTGAATTA+GGG - chr5_1:68557021-68557040 None:intergenic 20.0%
!! TTATCATTAGCATAAAACAT+TGG + chr5_1:68557117-68557136 Msa0746400:intron 20.0%
!!! CATTTTTTGTTTACTTGATA+GGG + chr5_1:68557197-68557216 Msa0746400:intron 20.0%
!!! ATTTTTTGTTTACTTGATAG+GGG + chr5_1:68557198-68557217 Msa0746400:intron 20.0%
!!! TTTAGTAGTAGTAAACTTTT+AGG + chr5_1:68557577-68557596 Msa0746400:intron 20.0%
!! TTCCCAAAATTAAATGTTTA+TGG - chr5_1:68557832-68557851 None:intergenic 20.0%
!! AGTATGATTTCATAATTCTT+TGG - chr5_1:68557869-68557888 None:intergenic 20.0%
!!! AGACCATACAAATTTAATTT+TGG + chr5_1:68558315-68558334 Msa0746400:CDS 20.0%
!!! GACCATACAAATTTAATTTT+GGG + chr5_1:68558316-68558335 Msa0746400:CDS 20.0%
!! ATCCCAAAATTAAATTTGTA+TGG - chr5_1:68558321-68558340 None:intergenic 20.0%
!!! TGTTGATTTGTTTCTTATTT+TGG - chr5_1:68558565-68558584 None:intergenic 20.0%
!! CTTGTCTAATTATGTTTATT+TGG - chr5_1:68558635-68558654 None:intergenic 20.0%
!! ATAAACATAATTAGACAAGT+TGG + chr5_1:68558636-68558655 Msa0746400:intron 20.0%
!! ACTCATTAATTCTTTCTTAA+CGG + chr5_1:68558757-68558776 Msa0746400:intron 20.0%
!! TAGAAAAGATCATTGAAAAT+AGG - chr5_1:68558876-68558895 None:intergenic 20.0%
!! TAAGTCGAATATCTTTAAAT+TGG + chr5_1:68558960-68558979 Msa0746400:intron 20.0%
!! AGAAATATAAGAGAAATAGA+AGG - chr5_1:68559056-68559075 None:intergenic 20.0%
!!! TTTAGTTTTGGATGTATTTA+TGG - chr5_1:68559353-68559372 None:intergenic 20.0%
!!! CTTTATAATTTGTGCAATTT+TGG + chr5_1:68559752-68559771 Msa0746400:intron 20.0%
!! ATAGATAAAGAATGGAAAAA+GGG - chr5_1:68560101-68560120 None:intergenic 20.0%
!! TATAGATAAAGAATGGAAAA+AGG - chr5_1:68560102-68560121 None:intergenic 20.0%
!! TTGAAAGAATTAGATAGTTT+AGG - chr5_1:68560180-68560199 None:intergenic 20.0%
!!! AATTTTATGTTTGTTTGTCT+AGG + chr5_1:68560505-68560524 Msa0746400:intron 20.0%
!! ATATGTAGTATTATCGATAA+AGG - chr5_1:68560627-68560646 None:intergenic 20.0%
!! GATATGTAGTATTATTCATT+CGG - chr5_1:68560673-68560692 None:intergenic 20.0%
!! ATGGATAAAGAAATAAGAAA+AGG - chr5_1:68560815-68560834 None:intergenic 20.0%
!!! TCTTTCTTTTTCTTTTTTGA+TGG + chr5_1:68560984-68561003 Msa0746400:intron 20.0%
!!! CTTTCTTTTTCTTTTTTGAT+GGG + chr5_1:68560985-68561004 Msa0746400:intron 20.0%
!!! TTGTTAATAATTTGTGCTTT+CGG + chr5_1:68561068-68561087 Msa0746400:intron 20.0%
!! ATAATGTTAATTTCAATGTG+AGG + chr5_1:68561094-68561113 Msa0746400:intron 20.0%
!! AACTGCTTATATTAAAAAGA+AGG + chr5_1:68561176-68561195 Msa0746400:intron 20.0%
!! ACTCAAAATTGTATTGTATT+GGG + chr5_1:68561205-68561224 Msa0746400:intron 20.0%
!! TGAAAATTTCATGTAAAATG+CGG - chr5_1:68561260-68561279 None:intergenic 20.0%
!!! AAAAATTGACTTTAAAGGTT+GGG - chr5_1:68561772-68561791 None:intergenic 20.0%
! AAGAGATAAAAGAAAATCAG+CGG - chr5_1:68556869-68556888 None:intergenic 25.0%
! AATGAAAATTCATACCTGAT+TGG - chr5_1:68556917-68556936 None:intergenic 25.0%
!! GAATCAGTTGATATTGAATT+AGG - chr5_1:68557022-68557041 None:intergenic 25.0%
!!! AACTTCTTTTTTATGATCAG+CGG + chr5_1:68557084-68557103 Msa0746400:intron 25.0%
! CCTATCAAGTAAACAAAAAA+TGG - chr5_1:68557199-68557218 None:intergenic 25.0%
!!! CCATTTTTTGTTTACTTGAT+AGG + chr5_1:68557196-68557215 Msa0746400:intron 25.0%
!!! TATGGGTTTAATAGGTTTTT+TGG - chr5_1:68557340-68557359 None:intergenic 25.0%
!!! AGGCCATAAACATTTAATTT+TGG + chr5_1:68557826-68557845 Msa0746400:CDS 25.0%
!!! GGCCATAAACATTTAATTTT+GGG + chr5_1:68557827-68557846 Msa0746400:CDS 25.0%
!!! CATATGTTGATAATTTCTGT+TGG + chr5_1:68558437-68558456 Msa0746400:intron 25.0%
! TAAATCCTTTCTCAAATACT+AGG + chr5_1:68558589-68558608 Msa0746400:intron 25.0%
! TAATGAGTCGAATCAAAATA+TGG - chr5_1:68558745-68558764 None:intergenic 25.0%
! AGATCATTGAAAATAGGTTT+AGG - chr5_1:68558870-68558889 None:intergenic 25.0%
! TCGAATATCTTTAAATTGGA+TGG + chr5_1:68558964-68558983 Msa0746400:intron 25.0%
! CGAATATCTTTAAATTGGAT+GGG + chr5_1:68558965-68558984 Msa0746400:intron 25.0%
! GAATATCTTTAAATTGGATG+GGG + chr5_1:68558966-68558985 Msa0746400:intron 25.0%
! AATATCTTTAAATTGGATGG+GGG + chr5_1:68558967-68558986 Msa0746400:intron 25.0%
!! AACAATTTTCCCATAACAAT+AGG - chr5_1:68559415-68559434 None:intergenic 25.0%
! GTTATCAATGATATGTATGA+GGG - chr5_1:68559475-68559494 None:intergenic 25.0%
! AGTTATCAATGATATGTATG+AGG - chr5_1:68559476-68559495 None:intergenic 25.0%
! ATTGATCCACTACAAAATTT+AGG + chr5_1:68560036-68560055 Msa0746400:intron 25.0%
! ATTATGGATGTCAAAAGAAA+AGG - chr5_1:68560077-68560096 None:intergenic 25.0%
!! TAGTTTAGGACATTAAACAT+TGG - chr5_1:68560166-68560185 None:intergenic 25.0%
!!! GTATGATTCATTTTGAAACA+TGG - chr5_1:68560271-68560290 None:intergenic 25.0%
! TTTGTCCAATCTCTATAATA+AGG - chr5_1:68560486-68560505 None:intergenic 25.0%
! ATTCGGAATTGGAATTTAAT+AGG - chr5_1:68560656-68560675 None:intergenic 25.0%
! TAGTATTATTCATTCGGAAT+TGG - chr5_1:68560667-68560686 None:intergenic 25.0%
!!! TTAGAATGTTTTTTCATGTG+AGG + chr5_1:68560940-68560959 Msa0746400:intron 25.0%
!!! TTTTCTTTTTTGATGGGATT+TGG + chr5_1:68560991-68561010 Msa0746400:intron 25.0%
!!! TTTCTTTTTTGATGGGATTT+GGG + chr5_1:68560992-68561011 Msa0746400:intron 25.0%
!! TGTTAATAATTTGTGCTTTC+GGG + chr5_1:68561069-68561088 Msa0746400:intron 25.0%
! CACTCAAAATTGTATTGTAT+TGG + chr5_1:68561204-68561223 Msa0746400:intron 25.0%
! AATTGTATTGTATTGGGAAA+AGG + chr5_1:68561211-68561230 Msa0746400:intron 25.0%
! ATTGTATTGTATTGGGAAAA+GGG + chr5_1:68561212-68561231 Msa0746400:intron 25.0%
! AAAATTTCATGTAAAATGCG+GGG - chr5_1:68561258-68561277 None:intergenic 25.0%
! GAAAATTTCATGTAAAATGC+GGG - chr5_1:68561259-68561278 None:intergenic 25.0%
! GGAAAAAGATTTCTTGAAAA+AGG - chr5_1:68561585-68561604 None:intergenic 25.0%
! CAAAGATGATCAATTATTTC+TGG + chr5_1:68561639-68561658 Msa0746400:CDS 25.0%
!! TTTTGCTAATGAATCCATTT+AGG + chr5_1:68561723-68561742 Msa0746400:CDS 25.0%
!! AAAATTGACTTTAAAGGTTG+GGG - chr5_1:68561771-68561790 None:intergenic 25.0%
!! GAAAAATTGACTTTAAAGGT+TGG - chr5_1:68561773-68561792 None:intergenic 25.0%
!! GTTTATCAATCTCGAAATTT+TGG + chr5_1:68561884-68561903 Msa0746400:CDS 25.0%
!!! TATGTCAAGTTGAAAACTTT+GGG + chr5_1:68562178-68562197 Msa0746400:CDS 25.0%
!!! TCTTTTTGTTTGCCAATAAT+TGG + chr5_1:68562512-68562531 Msa0746400:three_prime_UTR 25.0%
! GTTTTTATCTTTCTCCAATC+AGG + chr5_1:68556900-68556919 Msa0746400:five_prime_UTR 30.0%
TTTACACATTGTAAAGCGAA+AGG - chr5_1:68556949-68556968 None:intergenic 30.0%
TAGAAAGCTTAGCTTAACAA+TGG - chr5_1:68557044-68557063 None:intergenic 30.0%
! GCTTTAAATAGACTAGATCT+TGG - chr5_1:68557253-68557272 None:intergenic 30.0%
GGAAGATATATGGGTTTAAT+AGG - chr5_1:68557348-68557367 None:intergenic 30.0%
TTTCATGTCTTCGTATGATT+TGG + chr5_1:68557391-68557410 Msa0746400:intron 30.0%
GCAGATATATTAGTGTGATT+AGG + chr5_1:68557424-68557443 Msa0746400:intron 30.0%
AGTTGTGTTTCAAGATAAGA+TGG + chr5_1:68557949-68557968 Msa0746400:CDS 30.0%
ATTGCGATGAAGCTATTTAA+AGG + chr5_1:68558046-68558065 Msa0746400:CDS 30.0%
TTGCGATGAAGCTATTTAAA+GGG + chr5_1:68558047-68558066 Msa0746400:CDS 30.0%
TTCCAACTTATCATGAAACA+CGG - chr5_1:68558203-68558222 None:intergenic 30.0%
ACAAGTTATCACAAATCACA+AGG + chr5_1:68558240-68558259 Msa0746400:CDS 30.0%
! ATATATCAAGGTGCTTAGTT+TGG - chr5_1:68558518-68558537 None:intergenic 30.0%
TTGGGAATGATCATATATCA+AGG - chr5_1:68558530-68558549 None:intergenic 30.0%
TAGAACCTAGTATTTGAGAA+AGG - chr5_1:68558597-68558616 None:intergenic 30.0%
TTTCTCAAATACTAGGTTCT+AGG + chr5_1:68558596-68558615 Msa0746400:intron 30.0%
TTGTAGCAAGGAGAATAAAT+TGG - chr5_1:68558842-68558861 None:intergenic 30.0%
TCATTGAAAATAGGTTTAGG+TGG - chr5_1:68558867-68558886 None:intergenic 30.0%
ATCTATTAGAGAGATAGTTG+GGG - chr5_1:68558911-68558930 None:intergenic 30.0%
CATCTATTAGAGAGATAGTT+GGG - chr5_1:68558912-68558931 None:intergenic 30.0%
CTCTCTAATAGATGGAAAAT+AGG + chr5_1:68558918-68558937 Msa0746400:intron 30.0%
AGATGGAAAATAGGTTTAAG+TGG + chr5_1:68558927-68558946 Msa0746400:intron 30.0%
!! TATTTAAACCGTGTTACTTG+TGG + chr5_1:68559103-68559122 Msa0746400:intron 30.0%
CTTCAAATAAGCATACAACT+CGG + chr5_1:68559307-68559326 Msa0746400:intron 30.0%
AAGTAAAAAGATAAGGGTTC+AGG + chr5_1:68559371-68559390 Msa0746400:intron 30.0%
AGTAAAAAGATAAGGGTTCA+GGG + chr5_1:68559372-68559391 Msa0746400:intron 30.0%
TGTTATGGGAAAATTGTTTG+TGG + chr5_1:68559417-68559436 Msa0746400:intron 30.0%
AAGTAAGTAGGTCGATTATA+TGG + chr5_1:68559639-68559658 Msa0746400:intron 30.0%
CAATCTTTCTTGTAACTTCA+TGG + chr5_1:68559708-68559727 Msa0746400:intron 30.0%
!!! TTTTTTGAAGGTAGGGTATT+GGG - chr5_1:68559850-68559869 None:intergenic 30.0%
!!! ATTTTTTGAAGGTAGGGTAT+TGG - chr5_1:68559851-68559870 None:intergenic 30.0%
!!! GTGGAAATTTTTTGAAGGTA+GGG - chr5_1:68559857-68559876 None:intergenic 30.0%
AAAAATTTCCACCCTTCAAT+AGG + chr5_1:68559865-68559884 Msa0746400:intron 30.0%
GTGACAAAATACCTATTGAA+GGG - chr5_1:68559879-68559898 None:intergenic 30.0%
! CATAGTCCTAAATTTTGTAG+TGG - chr5_1:68560045-68560064 None:intergenic 30.0%
ATGTCAAAAGAAAAGGAGAT+CGG - chr5_1:68560070-68560089 None:intergenic 30.0%
!! AGAATGGAAAAAGGGTATTA+TGG - chr5_1:68560093-68560112 None:intergenic 30.0%
TATAGTTAGATCGAGAAATG+GGG - chr5_1:68560135-68560154 None:intergenic 30.0%
GTATAGTTAGATCGAGAAAT+GGG - chr5_1:68560136-68560155 None:intergenic 30.0%
GACATTAAACATTGGTAAAC+TGG - chr5_1:68560158-68560177 None:intergenic 30.0%
AAACAGTAGACACTATAACT+AGG - chr5_1:68560217-68560236 None:intergenic 30.0%
CATGTGTGAATGAAGAATTT+CGG - chr5_1:68560302-68560321 None:intergenic 30.0%
CGCGTATGAATATAGAATTT+AGG - chr5_1:68560332-68560351 None:intergenic 30.0%
!! TGCTTATTTTTCACTGCAAA+CGG + chr5_1:68560374-68560393 Msa0746400:intron 30.0%
! TTAACTATACACGTTGCTTT+CGG + chr5_1:68560435-68560454 Msa0746400:intron 30.0%
CATTCTCACTATTACGTATT+TGG + chr5_1:68560459-68560478 Msa0746400:intron 30.0%
TTGGTCCTTATTATAGAGAT+TGG + chr5_1:68560478-68560497 Msa0746400:intron 30.0%
AACACAACCGTCATTTAATT+AGG + chr5_1:68560531-68560550 Msa0746400:intron 30.0%
TACCATGCCTAATTAAATGA+CGG - chr5_1:68560541-68560560 None:intergenic 30.0%
CATTTAATTAGGCATGGTAT+TGG + chr5_1:68560542-68560561 Msa0746400:intron 30.0%
TGCATAGCAAGGATAAAAAT+CGG + chr5_1:68560568-68560587 Msa0746400:intron 30.0%
TATTTCTTTATCCATGCTGA+TGG + chr5_1:68560820-68560839 Msa0746400:intron 30.0%
ATTTCTTTATCCATGCTGAT+GGG + chr5_1:68560821-68560840 Msa0746400:intron 30.0%
!!! TTCTTTTTTGATGGGATTTG+GGG + chr5_1:68560993-68561012 Msa0746400:intron 30.0%
ATGCAAAGGGAAAAAAAGAA+TGG + chr5_1:68561388-68561407 Msa0746400:intron 30.0%
! GAAGACTTTTGAACAAGTAA+TGG - chr5_1:68561563-68561582 None:intergenic 30.0%
TCTTTGAACGATAAACTTGT+TGG - chr5_1:68561625-68561644 None:intergenic 30.0%
!! ATCAATCTCGAAATTTTGGT+TGG + chr5_1:68561888-68561907 Msa0746400:CDS 30.0%
!!! TCAATCTCGAAATTTTGGTT+GGG + chr5_1:68561889-68561908 Msa0746400:CDS 30.0%
TTGGGTTACTTATTCAACAA+TGG + chr5_1:68561907-68561926 Msa0746400:CDS 30.0%
TGGGTTACTTATTCAACAAT+GGG + chr5_1:68561908-68561927 Msa0746400:CDS 30.0%
TATATATGTTGTCAACGACA+AGG + chr5_1:68561973-68561992 Msa0746400:CDS 30.0%
ATATATGTTGTCAACGACAA+GGG + chr5_1:68561974-68561993 Msa0746400:CDS 30.0%
TTTCAACTTGACATACTTCA+TGG - chr5_1:68562173-68562192 None:intergenic 30.0%
!! GTATGTCAAGTTGAAAACTT+TGG + chr5_1:68562177-68562196 Msa0746400:CDS 30.0%
CATTGCATTATTATATGCTC+CGG + chr5_1:68562204-68562223 Msa0746400:CDS 30.0%
ATTGCATTATTATATGCTCC+GGG + chr5_1:68562205-68562224 Msa0746400:CDS 30.0%
ACAAAATGCAAAGTGTATGT+AGG + chr5_1:68562307-68562326 Msa0746400:CDS 30.0%
CAAAATGCAAAGTGTATGTA+GGG + chr5_1:68562308-68562327 Msa0746400:CDS 30.0%
AAAATGCAAAGTGTATGTAG+GGG + chr5_1:68562309-68562328 Msa0746400:CDS 30.0%
TTGAAGTCTACTCCAATTAT+TGG - chr5_1:68562527-68562546 None:intergenic 30.0%
TTTATGATCAGCGGTTGTTA+AGG + chr5_1:68557093-68557112 Msa0746400:intron 35.0%
!! TTTTGTTTACTTGATAGGGG+TGG + chr5_1:68557201-68557220 Msa0746400:intron 35.0%
! AAAAAGCATGAGCTTAGACT+AGG - chr5_1:68557285-68557304 None:intergenic 35.0%
CAGACATATTTGTGTGCTTT+AGG + chr5_1:68557474-68557493 Msa0746400:intron 35.0%
! GACATGTAGATTTTACTGCA+TGG - chr5_1:68557709-68557728 None:intergenic 35.0%
AGAAGTCATGAGTGATTACA+GGG + chr5_1:68557751-68557770 Msa0746400:CDS 35.0%
AGAGTGCATGAGTTGTTTAA+AGG + chr5_1:68557806-68557825 Msa0746400:CDS 35.0%
TGAAATCATACTTCCTCCAT+CGG + chr5_1:68557877-68557896 Msa0746400:CDS 35.0%
TACTTCTTGCCAGAAAGATA+CGG + chr5_1:68558097-68558116 Msa0746400:CDS 35.0%
AATGTGAATCCGTATCTTTC+TGG - chr5_1:68558109-68558128 None:intergenic 35.0%
TGTTTATGATCTTGCAACAG+TGG - chr5_1:68558133-68558152 None:intergenic 35.0%
CTGTTGCAAGATCATAAACA+AGG + chr5_1:68558133-68558152 Msa0746400:CDS 35.0%
TAAACTACTAACCAGTCTCA+TGG - chr5_1:68558399-68558418 None:intergenic 35.0%
CAGAGATGGTATAAACATGT+CGG - chr5_1:68558488-68558507 None:intergenic 35.0%
!! CAAATACTAGGTTCTAGGTT+AGG + chr5_1:68558601-68558620 Msa0746400:intron 35.0%
ATAGCGTAATTTGATCAACG+TGG - chr5_1:68558706-68558725 None:intergenic 35.0%
AGCAAGGAGAATAAATTGGA+TGG - chr5_1:68558838-68558857 None:intergenic 35.0%
CCATCTATTAGAGAGATAGT+TGG - chr5_1:68558913-68558932 None:intergenic 35.0%
CCAACTATCTCTCTAATAGA+TGG + chr5_1:68558910-68558929 Msa0746400:intron 35.0%
!!! TTCTCTGTCGTTTTGTACTA+TGG + chr5_1:68559072-68559091 Msa0746400:intron 35.0%
ATGTCATACCACAAGTAACA+CGG - chr5_1:68559114-68559133 None:intergenic 35.0%
ATCTTCAACTTTCACCTCTA+AGG + chr5_1:68559135-68559154 Msa0746400:intron 35.0%
ACTCTCTGTTCTTTCTACTT+AGG + chr5_1:68559197-68559216 Msa0746400:intron 35.0%
CTCTCTGTTCTTTCTACTTA+GGG + chr5_1:68559198-68559217 Msa0746400:intron 35.0%
TCTCTGTTCTTTCTACTTAG+GGG + chr5_1:68559199-68559218 Msa0746400:intron 35.0%
GAAGATAATGTAGTCCTGTT+TGG - chr5_1:68559291-68559310 None:intergenic 35.0%
!! TGGAAAGCTCTAGAGAAAAA+AGG - chr5_1:68559520-68559539 None:intergenic 35.0%
GCTTTCCACAAAAATTGTCT+AGG + chr5_1:68559532-68559551 Msa0746400:intron 35.0%
TATCATGCGTTGAAGTAAGT+AGG + chr5_1:68559627-68559646 Msa0746400:intron 35.0%
CAAAGCAAATGTTAGACAAG+TGG - chr5_1:68559796-68559815 None:intergenic 35.0%
!!! GGTGGAAATTTTTTGAAGGT+AGG - chr5_1:68559858-68559877 None:intergenic 35.0%
!!! GAAGGGTGGAAATTTTTTGA+AGG - chr5_1:68559862-68559881 None:intergenic 35.0%
ACAAAATACCTATTGAAGGG+TGG - chr5_1:68559876-68559895 None:intergenic 35.0%
CGTGACAAAATACCTATTGA+AGG - chr5_1:68559880-68559899 None:intergenic 35.0%
AGGTAAAAGAAGAGTTGACA+AGG - chr5_1:68559927-68559946 None:intergenic 35.0%
ACTACTAATTCAAGAACACG+AGG - chr5_1:68559947-68559966 None:intergenic 35.0%
! TGTTTTGTGGTTAGAAGAAC+AGG - chr5_1:68559997-68560016 None:intergenic 35.0%
GGTATAGTTAGATCGAGAAA+TGG - chr5_1:68560137-68560156 None:intergenic 35.0%
!! GCTTATTTTTCACTGCAAAC+GGG + chr5_1:68560375-68560394 Msa0746400:intron 35.0%
GCAACGTGTATAGTTAAAAG+CGG - chr5_1:68560432-68560451 None:intergenic 35.0%
! TAACTATACACGTTGCTTTC+GGG + chr5_1:68560436-68560455 Msa0746400:intron 35.0%
AACCGTCATTTAATTAGGCA+TGG + chr5_1:68560536-68560555 Msa0746400:intron 35.0%
AAGAAAAGGCAAAAGTAGTC+AGG - chr5_1:68560801-68560820 None:intergenic 35.0%
TTGTCATTGTTGTGATGCAA+AGG + chr5_1:68561374-68561393 Msa0746400:intron 35.0%
TGTCATTGTTGTGATGCAAA+GGG + chr5_1:68561375-68561394 Msa0746400:intron 35.0%
GGAAAAAAAGAATGGTAGCA+GGG + chr5_1:68561396-68561415 Msa0746400:CDS 35.0%
AGGGAACTATCAACTTTCTT+GGG + chr5_1:68561415-68561434 Msa0746400:CDS 35.0%
GAGATTTGGAAATGATATCG+AGG - chr5_1:68561445-68561464 None:intergenic 35.0%
GTCATCAAAGTCTAGAGATT+TGG - chr5_1:68561459-68561478 None:intergenic 35.0%
ACACACAAGCAAATTGAAAG+AGG - chr5_1:68561481-68561500 None:intergenic 35.0%
TTGCTTGTGTGTGTAAGAAT+TGG + chr5_1:68561489-68561508 Msa0746400:CDS 35.0%
TTGTGTGTGTAAGAATTGGA+GGG + chr5_1:68561493-68561512 Msa0746400:CDS 35.0%
GGGCATTTCATAAGATGTAT+TGG + chr5_1:68561513-68561532 Msa0746400:CDS 35.0%
GATGTATTGGAGAGATTTCT+TGG + chr5_1:68561526-68561545 Msa0746400:CDS 35.0%
TTGGTTAGGTATGCTGATAA+AGG - chr5_1:68561606-68561625 None:intergenic 35.0%
!! GAACGATAAACTTGTTGGTT+AGG - chr5_1:68561620-68561639 None:intergenic 35.0%
AGTGGATATTTGATCATGAC+AGG + chr5_1:68561686-68561705 Msa0746400:CDS 35.0%
GTGGATATTTGATCATGACA+GGG + chr5_1:68561687-68561706 Msa0746400:CDS 35.0%
TCCATTTAGGAGAAGAAAGA+AGG + chr5_1:68561736-68561755 Msa0746400:CDS 35.0%
ACCTTCTTTCTTCTCCTAAA+TGG - chr5_1:68561740-68561759 None:intergenic 35.0%
CAAAGTCAACAATCATCCAT+GGG - chr5_1:68561937-68561956 None:intergenic 35.0%
ACAAAGTCAACAATCATCCA+TGG - chr5_1:68561938-68561957 None:intergenic 35.0%
! TTGTGACGAACAACTTTTTG+TGG + chr5_1:68562096-68562115 Msa0746400:CDS 35.0%
ATTAAATGCCACCATAGACT+TGG - chr5_1:68562128-68562147 None:intergenic 35.0%
TCATGTGACCTAATGTACTT+TGG - chr5_1:68562349-68562368 None:intergenic 35.0%
ATCGCAATAAACCCACTGAT+CGG - chr5_1:68556780-68556799 None:intergenic 40.0%
TAAAAGAAAATCAGCGGCAG+CGG - chr5_1:68556863-68556882 None:intergenic 40.0%
! AAACGCATCGTTGCTTTAGT+TGG + chr5_1:68556987-68557006 Msa0746400:intron 40.0%
!! ATCAAACAAAGCATCGCTTG+TGG - chr5_1:68557669-68557688 None:intergenic 40.0%
CAGAAGTCATGAGTGATTAC+AGG + chr5_1:68557750-68557769 Msa0746400:CDS 40.0%
! TTCAGTTTTTCATCCGATGG+AGG - chr5_1:68557893-68557912 None:intergenic 40.0%
! CGATTCAGTTTTTCATCCGA+TGG - chr5_1:68557896-68557915 None:intergenic 40.0%
!! AGGGCATGTCGATTTACTTT+CGG + chr5_1:68558066-68558085 Msa0746400:CDS 40.0%
AGCCGTGTTTCATGATAAGT+TGG + chr5_1:68558198-68558217 Msa0746400:CDS 40.0%
ATCACAAATCACAAGGCTCA+AGG + chr5_1:68558247-68558266 Msa0746400:CDS 40.0%
CAAGGCTCAAGGAATTGATA+CGG + chr5_1:68558258-68558277 Msa0746400:CDS 40.0%
AAGGCTCAAGGAATTGATAC+GGG + chr5_1:68558259-68558278 Msa0746400:CDS 40.0%
AGTGTGATTTGATGTTCCTC+TGG - chr5_1:68558358-68558377 None:intergenic 40.0%
TCATGGCAATGAAGCTCAAA+TGG - chr5_1:68558382-68558401 None:intergenic 40.0%
!!! TTTTGGTGCTGCATGTTGTT+GGG - chr5_1:68558548-68558567 None:intergenic 40.0%
!!! ATTTTGGTGCTGCATGTTGT+TGG - chr5_1:68558549-68558568 None:intergenic 40.0%
!! ACCAAGCCTTGTTTCAAAAG+CGG + chr5_1:68558674-68558693 Msa0746400:intron 40.0%
!!! CCAATACCGCTTTTGAAACA+AGG - chr5_1:68558683-68558702 None:intergenic 40.0%
! CCTTGTTTCAAAAGCGGTAT+TGG + chr5_1:68558680-68558699 Msa0746400:intron 40.0%
!!! GTTTAGGTGGTTTTGTAGCA+AGG - chr5_1:68558854-68558873 None:intergenic 40.0%
! GCTAAGTAGTTCTACCTTAG+AGG - chr5_1:68559152-68559171 None:intergenic 40.0%
CTCTGTTCTTTCTACTTAGG+GGG + chr5_1:68559200-68559219 Msa0746400:intron 40.0%
TAAGCATACAACTCGGAGTT+AGG + chr5_1:68559314-68559333 Msa0746400:intron 40.0%
TAACAATAGGATTGCGCCAA+GGG - chr5_1:68559402-68559421 None:intergenic 40.0%
ATAACAATAGGATTGCGCCA+AGG - chr5_1:68559403-68559422 None:intergenic 40.0%
TTGGCGCAATCCTATTGTTA+TGG + chr5_1:68559402-68559421 Msa0746400:intron 40.0%
TGGCGCAATCCTATTGTTAT+GGG + chr5_1:68559403-68559422 Msa0746400:intron 40.0%
! GAGTGCCTAGACAATTTTTG+TGG - chr5_1:68559540-68559559 None:intergenic 40.0%
! CATGATAGAGTGCTATAGGA+TGG - chr5_1:68559614-68559633 None:intergenic 40.0%
! AACGCATGATAGAGTGCTAT+AGG - chr5_1:68559618-68559637 None:intergenic 40.0%
ATTATATGGTCGTCCTTCCT+TGG + chr5_1:68559653-68559672 Msa0746400:intron 40.0%
TTATATGGTCGTCCTTCCTT+GGG + chr5_1:68559654-68559673 Msa0746400:intron 40.0%
TAGACACTATAACTAGGAGG+AGG - chr5_1:68560211-68560230 None:intergenic 40.0%
CAGTAGACACTATAACTAGG+AGG - chr5_1:68560214-68560233 None:intergenic 40.0%
ATACGCGTTCACGAAGATAT+AGG + chr5_1:68560345-68560364 Msa0746400:intron 40.0%
! TATTTTTCACTGCAAACGGG+TGG + chr5_1:68560378-68560397 Msa0746400:intron 40.0%
GCAAGGATAAAAATCGGAAG+AGG + chr5_1:68560574-68560593 Msa0746400:intron 40.0%
TTATCCATGCTGATGGGATT+CGG + chr5_1:68560827-68560846 Msa0746400:intron 40.0%
GGGAAAAAAAGAATGGTAGC+AGG + chr5_1:68561395-68561414 Msa0746400:intron 40.0%
CAGGGAACTATCAACTTTCT+TGG + chr5_1:68561414-68561433 Msa0746400:CDS 40.0%
CTTGTGTGTGTAAGAATTGG+AGG + chr5_1:68561492-68561511 Msa0746400:CDS 40.0%
TTCTGGCACTTTGCATATTC+TGG + chr5_1:68561656-68561675 Msa0746400:CDS 40.0%
GCATATTCTGGATCTTCTAG+TGG + chr5_1:68561668-68561687 Msa0746400:CDS 40.0%
TGTCAAAAGCAAGCAAGACA+CGG - chr5_1:68561808-68561827 None:intergenic 40.0%
!! GTCTTGCTTGCTTTTGACAA+AGG + chr5_1:68561809-68561828 Msa0746400:CDS 40.0%
! CTCCAAGGATTTTGTCTTAG+TGG + chr5_1:68561832-68561851 Msa0746400:CDS 40.0%
AGCCACTAAGACAAAATCCT+TGG - chr5_1:68561837-68561856 None:intergenic 40.0%
ATTCAACAATGGGATACCCA+TGG + chr5_1:68561918-68561937 Msa0746400:CDS 40.0%
TGTGGTTCATACCAAGTCTA+TGG + chr5_1:68562114-68562133 Msa0746400:CDS 40.0%
TTTCATAACCCCACATGTTC+GGG - chr5_1:68562255-68562274 None:intergenic 40.0%
CTTTCATAACCCCACATGTT+CGG - chr5_1:68562256-68562275 None:intergenic 40.0%
ACAAGCTGCCAAAGTACATT+AGG + chr5_1:68562338-68562357 Msa0746400:CDS 40.0%
TTCATACTACAAGACCCTAC+TGG + chr5_1:68562374-68562393 Msa0746400:CDS 40.0%
AACGCAGATCAAAAGCTACA+TGG - chr5_1:68562471-68562490 None:intergenic 40.0%
! TGTAGCTTTTGATCTGCGTT+TGG + chr5_1:68562471-68562490 Msa0746400:three_prime_UTR 40.0%
ACTGATCGGGATATGATGAG+TGG - chr5_1:68556766-68556785 None:intergenic 45.0%
ACTCATCATATCCCGATCAG+TGG + chr5_1:68556765-68556784 Msa0746400:five_prime_UTR 45.0%
CTCATCATATCCCGATCAGT+GGG + chr5_1:68556766-68556785 Msa0746400:five_prime_UTR 45.0%
TCGCAATAAACCCACTGATC+GGG - chr5_1:68556779-68556798 None:intergenic 45.0%
TGGATGTCTCTTGTGCTCTT+AGG - chr5_1:68557179-68557198 None:intergenic 45.0%
CATGCTAAACCGTTCGTCAT+AGG + chr5_1:68557226-68557245 Msa0746400:intron 45.0%
GATCTTGGACCTATGACGAA+CGG - chr5_1:68557238-68557257 None:intergenic 45.0%
GTCATGAGTGATTACAGGGA+TGG + chr5_1:68557755-68557774 Msa0746400:CDS 45.0%
GATGGACGAATTGATCCAAG+AGG + chr5_1:68557773-68557792 Msa0746400:CDS 45.0%
ACTCTTGCTTTGACACCTCT+TGG - chr5_1:68557791-68557810 None:intergenic 45.0%
!! GGGCATGTCGATTTACTTTC+GGG + chr5_1:68558067-68558086 Msa0746400:CDS 45.0%
!! AATTGATACGGGAGGTGTTG+CGG + chr5_1:68558270-68558289 Msa0746400:CDS 45.0%
! AGTTTGGAGCACATCAGAGA+TGG - chr5_1:68558502-68558521 None:intergenic 45.0%
!!! ACCGCTTTTGAAACAAGGCT+TGG - chr5_1:68558678-68558697 None:intergenic 45.0%
AGACTTAAGACAAGCCGTAG+AGG - chr5_1:68559236-68559255 None:intergenic 45.0%
ATTCGAGAGAGGAACTGAGT+GGG - chr5_1:68559266-68559285 None:intergenic 45.0%
TACAACTCGGAGTTAGGTCT+TGG + chr5_1:68559320-68559339 Msa0746400:intron 45.0%
!! TTTGAAGGTAGGGTATTGGG+TGG - chr5_1:68559847-68559866 None:intergenic 45.0%
GAGTTGACAAGGATGAGCAA+TGG - chr5_1:68559916-68559935 None:intergenic 45.0%
AAGCGGAGTCAAATGAGCAA+GGG - chr5_1:68560415-68560434 None:intergenic 45.0%
AAAGCGGAGTCAAATGAGCA+AGG - chr5_1:68560416-68560435 None:intergenic 45.0%
!! GGTATTGGCTATGCATAGCA+AGG + chr5_1:68560557-68560576 Msa0746400:intron 45.0%
TATCCATGCTGATGGGATTC+GGG + chr5_1:68560828-68560847 Msa0746400:intron 45.0%
! TGCTTTTGACAAAGGCTCCA+AGG + chr5_1:68561817-68561836 Msa0746400:CDS 45.0%
TCAACGACAAGGGCAACATA+GGG + chr5_1:68561984-68562003 Msa0746400:CDS 45.0%
TAACTTCTTTGTCGCGCCTA+AGG + chr5_1:68562065-68562084 Msa0746400:CDS 45.0%
CGTCACAACTAACCAACCTT+AGG - chr5_1:68562084-68562103 None:intergenic 45.0%
GGTTCATACCAAGTCTATGG+TGG + chr5_1:68562117-68562136 Msa0746400:CDS 45.0%
GCATTATTATATGCTCCGGG+TGG + chr5_1:68562208-68562227 Msa0746400:CDS 45.0%
AAGGCATAGTAGTTTCCACC+CGG - chr5_1:68562226-68562245 None:intergenic 45.0%
TACTACAAGACCCTACTGGT+TGG + chr5_1:68562378-68562397 Msa0746400:CDS 45.0%
AAAGACCAGTCCAACCAGTA+GGG - chr5_1:68562391-68562410 None:intergenic 45.0%
AAAAGACCAGTCCAACCAGT+AGG - chr5_1:68562392-68562411 None:intergenic 45.0%
!!! TATTTGATTTTATTTTTTAT+TGG + chr5_1:68561321-68561340 Msa0746400:intron 5.0%
GCTCAAGGAATTGATACGGG+AGG + chr5_1:68558262-68558281 Msa0746400:CDS 50.0%
ATTCAATGCCTTGCTGCCAG+AGG + chr5_1:68558339-68558358 Msa0746400:CDS 50.0%
TTGATGTTCCTCTGGCAGCA+AGG - chr5_1:68558350-68558369 None:intergenic 50.0%
GAGCTTCATTGCCATGAGAC+TGG + chr5_1:68558385-68558404 Msa0746400:CDS 50.0%
GGGGAAGTCATACACCTCTA+CGG + chr5_1:68559219-68559238 Msa0746400:intron 50.0%
GATTCGAGAGAGGAACTGAG+TGG - chr5_1:68559267-68559286 None:intergenic 50.0%
CCTGTTTGGAGATTCGAGAG+AGG - chr5_1:68559277-68559296 None:intergenic 50.0%
CCTCTCTCGAATCTCCAAAC+AGG + chr5_1:68559274-68559293 Msa0746400:intron 50.0%
AGGGAGTTTCGACTAGTGTG+AGG - chr5_1:68559456-68559475 None:intergenic 50.0%
! AGAAAACCGACTCAAGCCCA+AGG - chr5_1:68559673-68559692 None:intergenic 50.0%
ATGAGCAATGGCAAAGCAGC+TGG - chr5_1:68559904-68559923 None:intergenic 50.0%
GAACAGGCTATGCATCAGAG+AGG - chr5_1:68559981-68560000 None:intergenic 50.0%
ATCCATGCTGATGGGATTCG+GGG + chr5_1:68560829-68560848 Msa0746400:intron 50.0%
TGGGATTCGGGGTCAGTAAA+AGG + chr5_1:68560840-68560859 Msa0746400:intron 50.0%
CGGGGTCAGTAAAAGGCTAA+AGG + chr5_1:68560847-68560866 Msa0746400:intron 50.0%
GTCAACGACAAGGGCAACAT+AGG + chr5_1:68561983-68562002 Msa0746400:CDS 50.0%
CGCGACAAAGAAGTTACGCT+AGG - chr5_1:68562061-68562080 None:intergenic 50.0%
TTCTTTGTCGCGCCTAAGGT+TGG + chr5_1:68562069-68562088 Msa0746400:CDS 50.0%
CTTGAGCAACCCGAACATGT+GGG + chr5_1:68562243-68562262 Msa0746400:CDS 50.0%
TTGAGCAACCCGAACATGTG+GGG + chr5_1:68562244-68562263 Msa0746400:CDS 50.0%
! TCGCGTCGACCTAGTTCCTT+TGG + chr5_1:68556831-68556850 Msa0746400:five_prime_UTR 55.0%
CGGCAGACACCAAAGGAACT+AGG - chr5_1:68556843-68556862 None:intergenic 55.0%
AAGGGTTCAGGGTTGACCCT+TGG + chr5_1:68559383-68559402 Msa0746400:intron 55.0%
TTCGACTAGTGTGAGGACGC+AGG - chr5_1:68559449-68559468 None:intergenic 55.0%
GTCCTTCCTTGGGCTTGAGT+CGG + chr5_1:68559664-68559683 Msa0746400:intron 55.0%
! AACCGACTCAAGCCCAAGGA+AGG - chr5_1:68559669-68559688 None:intergenic 55.0%
! GCAAACGGGTGGTAGTGTAG+CGG + chr5_1:68560389-68560408 Msa0746400:intron 55.0%
!! CCACATGTTCGGGTTGCTCA+AGG - chr5_1:68562245-68562264 None:intergenic 55.0%
CCTTGAGCAACCCGAACATG+TGG + chr5_1:68562242-68562261 Msa0746400:CDS 55.0%
! CAAGACCCTACTGGTTGGAC+TGG + chr5_1:68562383-68562402 Msa0746400:CDS 55.0%
GACCCCGAATCCCATCAGCA+TGG - chr5_1:68560834-68560853 None:intergenic 60.0%
GCGGCAGCGGCAGACACCAA+AGG - chr5_1:68556850-68556869 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 68556760 68562595 68556760 ID=Msa0746400;Name=Msa0746400
chr5_1 mRNA 68556760 68562595 68556760 ID=Msa0746400-mRNA-1;Parent=Msa0746400;Name=Msa0746400-mRNA-1;_AED=0.16;_eAED=0.16;_QI=181|1|1|1|0|0|3|142|602
chr5_1 exon 68556760 68556921 68556760 ID=Msa0746400-mRNA-1:exon:20446;Parent=Msa0746400-mRNA-1
chr5_1 exon 68557637 68558406 68557637 ID=Msa0746400-mRNA-1:exon:20447;Parent=Msa0746400-mRNA-1
chr5_1 exon 68561396 68562595 68561396 ID=Msa0746400-mRNA-1:exon:20448;Parent=Msa0746400-mRNA-1
chr5_1 five_prime_UTR 68556760 68556921 68556760 ID=Msa0746400-mRNA-1:five_prime_utr;Parent=Msa0746400-mRNA-1
chr5_1 five_prime_UTR 68557637 68557655 68557637 ID=Msa0746400-mRNA-1:five_prime_utr;Parent=Msa0746400-mRNA-1
chr5_1 CDS 68557656 68558406 68557656 ID=Msa0746400-mRNA-1:cds;Parent=Msa0746400-mRNA-1
chr5_1 CDS 68561396 68562453 68561396 ID=Msa0746400-mRNA-1:cds;Parent=Msa0746400-mRNA-1
chr5_1 three_prime_UTR 68562454 68562595 68562454 ID=Msa0746400-mRNA-1:three_prime_utr;Parent=Msa0746400-mRNA-1
Gene Sequence

>Msa0746400

ATGAATAGCTCCACAAGCGATGCTTTGTTTGATGATGCATGTGCGTATGACCATGCAGTAAAATCTACATGTCAAGAAAAGTATTCTGAATTTGCAGAAGTCATGAGTGATTACAGGGATGGACGAATTGATCCAAGAGGTGTCAAAGCAAGAGTGCATGAGTTGTTTAAAGGCCATAAACATTTAATTTTGGGAATCAACAACATCATGCCAAAGAATTATGAAATCATACTTCCTCCATCGGATGAAAAACTGAATCGACAAGATGCAACAACTTTTCTCAAACAAGTAAAAGTTGTGTTTCAAGATAAGATGGAAAAATATTATGAGTTTCTACAAGTCATACAAGACTACATGAATCTCACAATTGATATATTAGATGTCATCAAAATTGCGATGAAGCTATTTAAAGGGCATGTCGATTTACTTTCGGGATTCAACTACTTCTTGCCAGAAAGATACGGATTCACATTTCCACTGTTGCAAGATCATAAACAAGGTCATCAATTAGTGATAAAAGATGCATTTCTCAATGAAGTCAAAGCCGTGTTTCATGATAAGTTGGAAAAATATTTTGAGTTTTTACAAGTTATCACAAATCACAAGGCTCAAGGAATTGATACGGGAGGTGTTGCGGCAATAGTGAAAGAGTTATTTAAAGACCATACAAATTTAATTTTGGGATTCAATGCCTTGCTGCCAGAGGAACATCAAATCACACTTCCATTTGAGCTTCATTGCCATGAGACTGGGAAAAAAAGAATGGTAGCAGGGAACTATCAACTTTCTTGGGATGTCCTCGATATCATTTCCAAATCTCTAGACTTTGATGACCTCTTTCAATTTGCTTGTGTGTGTAAGAATTGGAGGGCATTTCATAAGATGTATTGGAGAGATTTCTTGGCATTACAAGAACCATTACTTGTTCAAAAGTCTTCCTTTTTCAAGAAATCTTTTTCCTTTATCAGCATACCTAACCAACAAGTTTATCGTTCAAAGATGATCAATTATTTCTGGCACTTTGCATATTCTGGATCTTCTAGTGGATATTTGATCATGACAGGGAACAATAATTCATTTTTGCTAATGAATCCATTTAGGAGAAGAAAGAAGGTAATCAATGCCCCAACCTTTAAAGTCAATTTTTCTTATTTTGCTTACCGTGTCTTGCTTGCTTTTGACAAAGGCTCCAAGGATTTTGTCTTAGTGGCTTTATGTAAAAGTTCTAATAGTTTGCATGTTTATCAATCTCGAAATTTTGGTTGGGTTACTTATTCAACAATGGGATACCCATGGATGATTGTTGACTTTGTTGTTTTGCATAACACTATATATGTTGTCAACGACAAGGGCAACATAGGGATACTCAACTTAAATTATGTGAATATAAAATTTTTAGAAATGAAGAGTATTCCTAGCGTAACTTCTTTGTCGCGCCTAAGGTTGGTTAGTTGTGACGAACAACTTTTTGTGGTTCATACCAAGTCTATGGTGGCATTTAATGTGTACAAGATTGACTTCTCAACCATGAAGTATGTCAAGTTGAAAACTTTGGGTGACATTGCATTATTATATGCTCCGGGTGGAAACTACTATGCCTTGAGCAACCCGAACATGTGGGGTTATGAAAGCAACTCTGTGTATGTTATCGATCATTCGTCTACAAAATGCAAAGTGTATGTAGGGGATGACAACAAGCTGCCAAAGTACATTAGGTCACATGATGATCTTCATACTACAAGACCCTACTGGTTGGACTGGTCTTTTAGACATTTTCACTACGAGATAGATTATTCTCTAGTTGACTAA
Protein sequence

>Msa0746400

MNSSTSDALFDDACAYDHAVKSTCQEKYSEFAEVMSDYRDGRIDPRGVKARVHELFKGHKHLILGINNIMPKNYEIILPPSDEKLNRQDATTFLKQVKVVFQDKMEKYYEFLQVIQDYMNLTIDILDVIKIAMKLFKGHVDLLSGFNYFLPERYGFTFPLLQDHKQGHQLVIKDAFLNEVKAVFHDKLEKYFEFLQVITNHKAQGIDTGGVAAIVKELFKDHTNLILGFNALLPEEHQITLPFELHCHETGKKRMVAGNYQLSWDVLDIISKSLDFDDLFQFACVCKNWRAFHKMYWRDFLALQEPLLVQKSSFFKKSFSFISIPNQQVYRSKMINYFWHFAYSGSSSGYLIMTGNNNSFLLMNPFRRRKKVINAPTFKVNFSYFAYRVLLAFDKGSKDFVLVALCKSSNSLHVYQSRNFGWVTYSTMGYPWMIVDFVVLHNTIYVVNDKGNIGILNLNYVNIKFLEMKSIPSVTSLSRLRLVSCDEQLFVVHTKSMVAFNVYKIDFSTMKYVKLKTLGDIALLYAPGGNYYALSNPNMWGYESNSVYVIDHSSTKCKVYVGDDNKLPKYIRSHDDLHTTRPYWLDWSFRHFHYEIDYSLVD*