AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1224560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224560 MtrunA17_Chr4g0075971 91.860 602 49 0 1 602 1 602 0.0 1118
Msa1224560 MtrunA17_Chr4g0075861 92.493 373 28 0 1 373 1 373 0.0 692
Msa1224560 MtrunA17_Chr3g0077801 68.300 347 106 2 256 599 4 349 3.97e-166 477
Msa1224560 MtrunA17_Chr3g0077901 64.873 353 122 1 251 601 19 371 5.35e-163 470
Msa1224560 MtrunA17_Chr3g0077851 66.866 335 109 1 269 601 1 335 3.09e-158 456
Msa1224560 MtrunA17_Chr6g0488101 52.667 450 186 9 175 602 11 455 8.17e-153 447
Msa1224560 MtrunA17_Chr6g0488271 53.333 420 176 8 198 602 1 415 9.03e-145 425
Msa1224560 MtrunA17_Chr3g0112311 61.453 358 123 5 254 600 2 355 1.66e-137 404
Msa1224560 MtrunA17_Chr7g0252101 53.153 444 180 12 167 602 9 432 1.17e-132 395
Msa1224560 MtrunA17_Chr7g0243331 60.000 350 134 4 255 601 3 349 1.21e-129 384
Msa1224560 MtrunA17_Chr1g0207351 59.091 352 133 5 259 602 18 366 1.37e-126 377
Msa1224560 MtrunA17_Chr3g0093911 57.790 353 141 5 254 602 2 350 4.53e-123 367
Msa1224560 MtrunA17_Chr6g0452641 60.772 311 106 4 304 602 34 340 4.64e-112 338
Msa1224560 MtrunA17_Chr3g0122991 51.393 323 97 4 256 568 3 275 9.81e-99 302
Msa1224560 MtrunA17_Chr1g0209051 57.196 271 112 2 334 601 1 270 3.00e-93 287
Msa1224560 MtrunA17_Chr3g0123471 58.712 264 101 5 334 594 1 259 3.11e-89 276
Msa1224560 MtrunA17_Chr2g0328701 95.413 109 5 0 1 109 18 126 4.37e-70 222
Msa1224560 MtrunA17_Chr2g0328701 39.623 106 54 3 89 192 29 126 9.36e-12 62.8
Msa1224560 MtrunA17_Chr2g0328701 45.588 68 34 1 175 242 32 96 4.59e-11 60.8
Msa1224560 MtrunA17_Chr7g0243391 55.446 202 88 1 261 462 26 225 4.15e-57 192
Msa1224560 MtrunA17_Chr1g0202841 54.696 181 72 3 428 601 1 178 5.05e-50 171
Msa1224560 MtrunA17_Chr6g0486591 52.830 159 64 3 455 602 1 159 9.85e-48 164
Msa1224560 MtrunA17_Chr1g0196231 43.049 223 111 5 174 395 159 366 4.87e-41 152
Msa1224560 MtrunA17_Chr1g0206951 66.372 113 37 1 255 366 1 113 1.04e-39 141
Msa1224560 MtrunA17_Chr1g0187941 53.435 131 58 1 433 560 6 136 7.35e-36 131
Msa1224560 MtrunA17_Chr1g0205821 42.767 159 88 1 89 244 13 171 3.71e-33 125
Msa1224560 MtrunA17_Chr1g0205821 43.103 174 87 4 1 163 1 173 3.21e-30 117
Msa1224560 MtrunA17_Chr3g0077941 45.614 171 85 4 83 245 2 172 1.92e-31 120
Msa1224560 MtrunA17_Chr3g0077941 41.611 149 77 2 25 163 25 173 2.74e-26 105
Msa1224560 MtrunA17_Chr3g0077891 44.186 172 87 4 83 245 2 173 4.10e-31 119
Msa1224560 MtrunA17_Chr3g0077891 43.056 144 71 2 25 157 25 168 6.32e-27 107
Msa1224560 MtrunA17_Chr3g0077911 45.752 153 77 3 12 158 8 160 7.27e-31 118
Msa1224560 MtrunA17_Chr3g0077911 46.497 157 76 5 89 241 8 160 2.93e-28 110
Msa1224560 MtrunA17_Chr3g0077861 46.405 153 76 3 12 158 8 160 1.28e-30 117
Msa1224560 MtrunA17_Chr3g0077861 43.827 162 85 3 83 241 2 160 1.72e-27 108
Msa1224560 MtrunA17_Chr3g0077861 46.575 73 35 1 12 80 90 162 6.22e-12 64.3
Msa1224560 MtrunA17_Chr7g0238781 47.761 134 68 2 285 418 27 158 5.27e-30 115
Msa1224560 MtrunA17_Chr7g0218891 33.191 235 146 5 20 244 26 259 6.78e-30 119
Msa1224560 MtrunA17_Chr7g0218891 36.301 146 87 2 25 164 117 262 1.52e-20 92.0
Msa1224560 MtrunA17_Chr7g0218891 34.270 178 105 6 90 256 14 190 8.29e-19 87.0
Msa1224560 MtrunA17_Chr1g0206771 41.772 158 78 2 88 240 15 163 5.33e-29 113
Msa1224560 MtrunA17_Chr1g0206771 44.595 148 72 3 13 154 17 160 1.82e-26 106
Msa1224560 MtrunA17_Chr1g0206771 47.222 72 35 1 8 76 91 162 1.06e-12 67.0
Msa1224560 MtrunA17_Chr3g0077881 43.114 167 86 4 83 240 2 168 9.51e-28 110
Msa1224560 MtrunA17_Chr3g0077881 42.282 149 74 4 25 162 25 172 3.35e-27 108
Msa1224560 MtrunA17_Chr1g0205831 40.789 152 78 2 93 244 6 145 3.04e-26 105
Msa1224560 MtrunA17_Chr1g0205831 40.559 143 76 2 25 167 18 151 5.56e-23 96.7
Msa1224560 MtrunA17_Chr1g0209191 54.082 98 39 1 510 601 1 98 1.32e-25 101
Msa1224560 MtrunA17_Chr1g0196241 70.833 72 20 1 501 571 3 74 3.86e-25 99.4
Msa1224560 MtrunA17_Chr6g0459061 26.347 334 235 7 270 598 27 354 3.88e-25 107
Msa1224560 MtrunA17_Chr1g0209201 40.141 142 80 2 1 140 5 143 3.71e-24 98.6
Msa1224560 MtrunA17_Chr1g0209201 35.766 137 75 4 89 222 16 142 4.67e-16 75.5
Msa1224560 MtrunA17_Chr1g0209201 47.692 65 33 1 175 239 19 82 1.74e-12 65.1
Msa1224560 MtrunA17_Chr5g0415031 40.000 160 87 2 2 152 33 192 1.02e-23 106
Msa1224560 MtrunA17_Chr5g0415031 35.185 162 100 2 79 235 31 192 9.45e-21 97.4
Msa1224560 MtrunA17_Chr5g0415031 51.899 79 38 0 175 253 46 124 1.16e-15 81.3
Msa1224560 MtrunA17_Chr8g0364231 39.766 171 86 3 11 164 41 211 3.02e-23 105
Msa1224560 MtrunA17_Chr8g0364231 35.256 156 98 2 83 235 36 191 3.19e-19 92.4
Msa1224560 MtrunA17_Chr8g0364231 52.564 78 35 1 167 242 35 112 3.18e-15 79.7
Msa1224560 MtrunA17_Chr6g0452001 39.375 160 87 3 3 152 53 212 6.13e-21 97.8
Msa1224560 MtrunA17_Chr6g0452001 34.615 156 99 1 83 235 57 212 6.94e-18 88.2
Msa1224560 MtrunA17_Chr6g0452001 52.632 76 34 1 168 241 57 132 8.27e-14 75.1
Msa1224560 MtrunA17_Chr6g0452021 39.189 148 83 2 12 152 43 190 1.09e-19 92.4
Msa1224560 MtrunA17_Chr6g0452021 35.484 155 95 3 84 235 38 190 4.18e-17 84.3
Msa1224560 MtrunA17_Chr6g0452021 59.701 67 27 0 175 241 46 112 6.99e-15 77.4
Msa1224560 MtrunA17_Chr1g0209061 43.697 119 42 4 175 292 13 107 6.08e-18 79.7
Msa1224560 MtrunA17_Chr1g0206781 53.030 66 31 0 175 240 14 79 4.02e-15 72.0
Msa1224560 MtrunA17_Chr1g0206781 35.433 127 59 1 81 207 3 106 9.35e-15 70.9
Msa1224560 MtrunA17_Chr1g0206781 39.130 115 47 2 13 124 12 106 6.33e-14 68.6
Msa1224560 MtrunA17_Chr1g0205861 49.315 73 37 0 85 157 12 84 8.01e-15 71.2
Msa1224560 MtrunA17_Chr1g0205861 40.244 82 46 1 162 240 3 84 1.39e-12 64.7
Msa1224560 MtrunA17_Chr1g0205811 50.000 70 35 0 175 244 17 86 5.31e-14 68.9
Msa1224560 MtrunA17_Chr1g0205811 37.634 93 58 0 82 174 7 99 3.36e-13 66.6
Msa1224560 MtrunA17_Chr1g0205811 50.000 60 30 0 25 84 30 89 8.65e-12 62.8
Msa1224560 MtrunA17_Chr8g0364021 39.785 93 54 1 83 175 38 128 7.58e-14 71.6
Msa1224560 MtrunA17_Chr1g0205801 36.364 99 63 0 89 187 12 110 4.10e-13 66.2
Msa1224560 MtrunA17_Chr1g0205801 42.857 70 40 0 175 244 15 84 1.18e-11 62.0
Msa1224560 MtrunA17_Chr7g0218911 44.776 67 37 0 176 242 2 68 4.87e-12 63.2
Msa1224560 MtrunA17_Chr7g0218911 39.474 76 45 1 25 99 14 89 5.56e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224560 AT1G24190.1 39.735 151 82 2 11 152 13 163 5.98e-23 104
Msa1224560 AT1G24190.1 32.919 161 99 2 81 235 6 163 2.28e-17 87.0
Msa1224560 AT1G24190.1 35.152 165 85 4 175 326 17 172 2.73e-13 73.9
Msa1224560 AT1G24190.2 39.735 151 82 2 11 152 13 163 6.08e-23 104
Msa1224560 AT1G24190.2 32.919 161 99 2 81 235 6 163 2.30e-17 87.0
Msa1224560 AT1G24190.2 35.152 165 85 4 175 326 17 172 2.90e-13 73.9
Msa1224560 AT1G24190.3 39.735 151 82 2 11 152 13 163 6.38e-23 104
Msa1224560 AT1G24190.3 32.919 161 99 2 81 235 6 163 2.03e-17 87.0
Msa1224560 AT1G24190.3 35.152 165 85 4 175 326 17 172 2.79e-13 73.9
Msa1224560 AT1G70060.2 38.750 160 88 2 3 152 5 164 9.07e-22 100
Msa1224560 AT1G70060.2 33.333 159 102 1 81 235 6 164 1.18e-16 84.7
Msa1224560 AT1G70060.2 54.286 70 32 0 175 244 17 86 1.24e-12 71.6
Msa1224560 AT1G70060.1 38.750 160 88 2 3 152 5 164 9.07e-22 100
Msa1224560 AT1G70060.1 33.333 159 102 1 81 235 6 164 1.18e-16 84.7
Msa1224560 AT1G70060.1 54.286 70 32 0 175 244 17 86 1.24e-12 71.6
Msa1224560 AT3G01320.1 40.268 149 81 2 11 151 56 204 3.04e-21 99.4
Msa1224560 AT3G01320.1 33.766 154 100 1 83 234 51 204 1.56e-16 84.3
Msa1224560 AT3G01320.1 55.263 76 32 1 168 241 51 126 1.19e-15 81.6
Msa1224560 AT3G01320.2 40.268 149 81 2 11 151 56 204 3.19e-21 99.4
Msa1224560 AT3G01320.2 33.766 154 100 1 83 234 51 204 1.55e-16 84.3
Msa1224560 AT3G01320.2 55.263 76 32 1 168 241 51 126 1.24e-15 81.3
Msa1224560 AT1G59890.2 39.752 161 87 3 12 162 45 205 1.12e-20 97.4
Msa1224560 AT1G59890.2 37.162 148 92 1 89 235 45 192 2.58e-17 86.7
Msa1224560 AT1G59890.2 40.385 104 56 2 175 278 48 145 1.95e-11 67.8
Msa1224560 AT1G59890.4 39.752 161 87 3 12 162 45 205 1.14e-20 97.4
Msa1224560 AT1G59890.4 37.162 148 92 1 89 235 45 192 2.64e-17 86.7
Msa1224560 AT1G59890.4 40.385 104 56 2 175 278 48 145 2.08e-11 67.8
Msa1224560 AT1G59890.3 39.752 161 87 3 12 162 45 205 1.15e-20 97.4
Msa1224560 AT1G59890.3 37.162 148 92 1 89 235 45 192 2.60e-17 86.7
Msa1224560 AT1G59890.3 40.385 104 56 2 175 278 48 145 2.03e-11 67.8
Msa1224560 AT1G59890.1 39.752 161 87 3 12 162 45 205 1.17e-20 97.4
Msa1224560 AT1G59890.1 37.162 148 92 1 89 235 45 192 2.51e-17 86.7
Msa1224560 AT1G59890.1 40.385 104 56 2 175 278 48 145 1.93e-11 67.8
Msa1224560 AT5G15020.2 38.926 149 84 2 11 152 51 199 2.36e-20 96.7
Msa1224560 AT5G15020.2 34.416 154 100 1 83 235 46 199 6.17e-18 89.0
Msa1224560 AT5G15020.2 51.316 76 35 1 168 241 46 121 1.45e-13 74.7
Msa1224560 AT5G15020.1 38.926 149 84 2 11 152 51 199 2.46e-20 96.3
Msa1224560 AT5G15020.1 34.416 154 100 1 83 235 46 199 6.40e-18 88.6
Msa1224560 AT5G15020.1 51.316 76 35 1 168 241 46 121 1.54e-13 74.7
Msa1224560 AT1G24230.1 32.370 173 102 4 89 260 14 172 1.48e-19 89.0
Msa1224560 AT1G24230.1 26.667 225 150 4 11 230 13 227 1.07e-17 83.6
Msa1224560 AT1G10450.3 34.759 187 114 3 12 191 84 269 4.47e-19 92.4
Msa1224560 AT1G10450.3 37.838 148 89 2 89 234 84 230 4.46e-18 89.4
Msa1224560 AT1G10450.3 49.254 67 34 0 175 241 87 153 2.02e-11 67.8
Msa1224560 AT1G10450.2 34.759 187 114 3 12 191 33 218 6.26e-19 92.0
Msa1224560 AT1G10450.2 37.838 148 89 2 89 234 33 179 5.03e-18 89.0
Msa1224560 AT1G10450.2 49.254 67 34 0 175 241 36 102 2.17e-11 67.8
Msa1224560 AT1G10450.1 34.759 187 114 3 12 191 33 218 6.26e-19 92.0
Msa1224560 AT1G10450.1 37.838 148 89 2 89 234 33 179 5.03e-18 89.0
Msa1224560 AT1G10450.1 49.254 67 34 0 175 241 36 102 2.17e-11 67.8
Msa1224560 AT1G27260.1 34.615 156 91 3 90 236 4 157 4.61e-17 80.9
Msa1224560 AT1G27260.1 31.210 157 95 2 13 156 4 160 6.50e-14 72.0
Msa1224560 AT1G70030.1 34.416 154 87 5 12 155 11 160 3.07e-16 77.0
Msa1224560 AT1G70030.1 33.333 159 97 4 81 234 3 157 2.33e-14 71.6
Msa1224560 AT1G24200.1 35.570 149 90 2 89 234 14 159 7.56e-16 77.0
Msa1224560 AT1G24200.1 34.694 147 90 2 11 151 13 159 2.18e-15 75.5
Msa1224560 AT1G24200.1 39.000 100 54 2 167 264 7 101 3.44e-12 66.2
Msa1224560 AT1G27280.1 31.737 167 106 3 100 258 4 170 9.13e-15 74.3
Msa1224560 AT1G24250.1 30.508 177 94 4 10 157 12 188 9.61e-15 75.1
Msa1224560 AT1G24250.1 28.235 170 97 4 88 233 13 181 1.43e-11 65.5
Msa1224560 AT1G23810.1 29.944 177 106 3 2 160 4 180 1.55e-14 73.9
Msa1224560 AT1G23810.1 30.189 159 97 4 88 233 13 170 8.22e-13 68.9
Msa1224560 AT5G35610.1 36.283 113 62 2 176 281 14 123 2.96e-13 68.2
Msa1224560 AT5G15025.1 45.349 86 43 2 2 83 36 121 6.87e-12 63.2
Msa1224560 AT5G15025.1 50.000 70 35 0 175 244 50 119 7.94e-12 63.2
Msa1224560 AT1G70030.2 33.333 147 66 6 12 155 22 139 7.24e-12 63.9
Msa1224560 AT4G12020.11 51.515 66 31 1 176 241 312 376 7.22e-11 65.9
Msa1224560 AT4G12020.1 51.515 66 31 1 176 241 312 376 8.47e-11 65.9
Msa1224560 AT4G12020.9 51.515 66 31 1 176 241 312 376 8.47e-11 65.9
Msa1224560 AT4G12020.4 51.515 66 31 1 176 241 312 376 8.53e-11 65.9
Msa1224560 AT4G12020.2 51.515 66 31 1 176 241 312 376 8.91e-11 65.9
Msa1224560 AT4G12020.7 51.515 66 31 1 176 241 312 376 8.98e-11 65.9
Msa1224560 AT4G12020.3 51.515 66 31 1 176 241 312 376 9.05e-11 65.9
Msa1224560 AT4G12020.10 51.515 66 31 1 176 241 312 376 9.13e-11 65.9
Msa1224560 AT4G12020.6 51.515 66 31 1 176 241 312 376 9.20e-11 65.9
Msa1224560 AT4G12020.8 51.515 66 31 1 176 241 312 376 9.20e-11 65.9
Msa1224560 AT1G24220.2 25.818 275 156 8 3 252 5 256 9.61e-11 65.5
Msa1224560 AT1G24220.1 25.818 275 156 8 3 252 5 256 9.61e-11 65.5
Msa1224560 AT4G12020.5 51.515 66 31 1 176 241 245 309 9.65e-11 65.9

Find 112 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCAAAATTAAATGTTTA+TGG 0.087759 8_1:-89574051 None:intergenic
AGACCATACAAATTTAATTT+TGG 0.091325 8_1:+89574537 Msa1224560:CDS
AGGCCATAAACATTTAATTT+TGG 0.093733 8_1:+89574048 Msa1224560:CDS
TTCTGGCACTTTGCATATTC+TGG 0.140245 8_1:+89577874 Msa1224560:CDS
GTTTATCAATCTCGAAATTT+TGG 0.149964 8_1:+89578102 Msa1224560:CDS
ACCTTCTTTCTTCTCCTAAA+TGG 0.179169 8_1:-89577955 None:intergenic
TTGAAGTCTACTCCAATTAT+TGG 0.189002 8_1:-89578742 None:intergenic
CAAAGATGATCAATTATTTC+TGG 0.210256 8_1:+89577857 Msa1224560:CDS
GATGTATTGGAGAGATTTCT+TGG 0.258709 8_1:+89577744 Msa1224560:CDS
AATGTGAATCCGTATCTTTC+TGG 0.260796 8_1:-89574328 None:intergenic
GGGCATGTCGATTTACTTTC+GGG 0.267983 8_1:+89574289 Msa1224560:CDS
ATTGCGATGAAGCTATTTAA+AGG 0.296597 8_1:+89574268 Msa1224560:CDS
AGTATGATTTCATAATTCTT+TGG 0.310501 8_1:-89574088 None:intergenic
TGTGGTTCATACCAAGTCTA+TGG 0.311544 8_1:+89578332 Msa1224560:CDS
AGAGTGCATGAGTTGTTTAA+AGG 0.320962 8_1:+89574028 Msa1224560:CDS
TTTCAACTTGACATACTTCA+TGG 0.321469 8_1:-89578388 None:intergenic
AGGGCATGTCGATTTACTTT+CGG 0.325603 8_1:+89574288 Msa1224560:CDS
CAGGGAACTATCAACTTTCT+TGG 0.330236 8_1:+89577632 Msa1224560:CDS
GTCATCAAAGTCTAGAGATT+TGG 0.331846 8_1:-89577674 None:intergenic
CTTTCATAACCCCACATGTT+CGG 0.334790 8_1:-89578471 None:intergenic
CAGAAGTCATGAGTGATTAC+AGG 0.353321 8_1:+89573972 Msa1224560:CDS
TTTCATAACCCCACATGTTC+GGG 0.364907 8_1:-89578470 None:intergenic
ATCCCAAAATTAAATTTGTA+TGG 0.371343 8_1:-89574540 None:intergenic
GAACGATAAACTTGTTGGTT+AGG 0.372838 8_1:-89577835 None:intergenic
GGGCATTTCATAAGATGTAT+TGG 0.386928 8_1:+89577731 Msa1224560:CDS
TCTTTGAACGATAAACTTGT+TGG 0.391219 8_1:-89577840 None:intergenic
TTGCGATGAAGCTATTTAAA+GGG 0.398600 8_1:+89574269 Msa1224560:CDS
TATGTCAAGTTGAAAACTTT+GGG 0.415747 8_1:+89578396 Msa1224560:CDS
TTGCTTGTGTGTGTAAGAAT+TGG 0.421391 8_1:+89577707 Msa1224560:CDS
GGGCACATGAGAAGGTAATA+TGG 0.425769 8_1:-89578804 None:intergenic
ACTCTTGCTTTGACACCTCT+TGG 0.426483 8_1:-89574010 None:intergenic
CAAAATGCAAAGTGTATGTA+GGG 0.426712 8_1:+89578526 Msa1224560:CDS
ACAAGCTGCCAAAGTACATT+AGG 0.428568 8_1:+89578556 Msa1224560:CDS
TCATGGCAATGAAGCTCAAA+TGG 0.432218 8_1:-89574601 None:intergenic
AGTTGTGTTTCAAGATAAGA+TGG 0.435039 8_1:+89574171 Msa1224560:CDS
CATTGCATTATTATATGCTC+CGG 0.435194 8_1:+89578422 Msa1224560:CDS
AGGGAACTATCAACTTTCTT+GGG 0.435308 8_1:+89577633 Msa1224560:CDS
AAAATTGACTTTAAAGGTTG+GGG 0.437076 8_1:-89577986 None:intergenic
TAACTTCTTTGTCGCGCCTA+AGG 0.438182 8_1:+89578283 Msa1224560:CDS
TGGGTTACTTATTCAACAAT+GGG 0.440934 8_1:+89578126 Msa1224560:CDS
TTGGTTAGGTATGCTGATAA+AGG 0.451302 8_1:-89577821 None:intergenic
ACAAAATGCAAAGTGTATGT+AGG 0.455850 8_1:+89578525 Msa1224560:CDS
AGTGGATATTTGATCATGAC+AGG 0.457131 8_1:+89577904 Msa1224560:CDS
AATGAAAATTCATACCTGAT+TGG 0.458500 8_1:-89573067 None:intergenic
GAGCTTCATTGCCATGAGAC+TGG 0.471478 8_1:+89574607 Msa1224560:CDS
AGCCACTAAGACAAAATCCT+TGG 0.472342 8_1:-89578052 None:intergenic
AGCCGTGTTTCATGATAAGT+TGG 0.480965 8_1:+89574420 Msa1224560:CDS
TCGCAATAAACCCACTGATC+GGG 0.481249 8_1:-89572929 None:intergenic
TTCTTTGTCGCGCCTAAGGT+TGG 0.489388 8_1:+89578287 Msa1224560:CDS
CGGCAGACACCAAAGGAACT+AGG 0.501828 8_1:-89572993 None:intergenic
GTATGTCAAGTTGAAAACTT+TGG 0.511075 8_1:+89578395 Msa1224560:CDS
AGTGTGATTTGATGTTCCTC+TGG 0.511878 8_1:-89574577 None:intergenic
GCATATTCTGGATCTTCTAG+TGG 0.514037 8_1:+89577886 Msa1224560:CDS
TTGGGTTACTTATTCAACAA+TGG 0.515244 8_1:+89578125 Msa1224560:CDS
CGTCACAACTAACCAACCTT+AGG 0.518704 8_1:-89578299 None:intergenic
TCATGTGACCTAATGTACTT+TGG 0.520097 8_1:-89578564 None:intergenic
ATCGCAATAAACCCACTGAT+CGG 0.526426 8_1:-89572930 None:intergenic
ACAAAGTCAACAATCATCCA+TGG 0.526718 8_1:-89578153 None:intergenic
TACTTCTTGCCAGAAAGATA+CGG 0.529766 8_1:+89574319 Msa1224560:CDS
GTCAACGACAAGGGCAACAT+AGG 0.530388 8_1:+89578201 Msa1224560:CDS
CAAGGCTCAAGGAATTGATA+CGG 0.538557 8_1:+89574480 Msa1224560:CDS
TCCATTTAGGAGAAGAAAGA+AGG 0.539421 8_1:+89577954 Msa1224560:CDS
CCACATGTTCGGGTTGCTCA+AGG 0.539860 8_1:-89578460 None:intergenic
TAAAAGAAAATCAGCGGCAG+CGG 0.540117 8_1:-89573013 None:intergenic
ACACACAAGCAAATTGAAAG+AGG 0.547191 8_1:-89577696 None:intergenic
CTTGTGTGTGTAAGAATTGG+AGG 0.551053 8_1:+89577710 Msa1224560:CDS
TGTTTATGATCTTGCAACAG+TGG 0.557427 8_1:-89574352 None:intergenic
TGAAATCATACTTCCTCCAT+CGG 0.558415 8_1:+89574099 Msa1224560:CDS
AATTGATACGGGAGGTGTTG+CGG 0.560033 8_1:+89574492 Msa1224560:CDS
TTCATACTACAAGACCCTAC+TGG 0.561934 8_1:+89578592 Msa1224560:CDS
CCTTGAGCAACCCGAACATG+TGG 0.567823 8_1:+89578460 Msa1224560:CDS
ATTGCATTATTATATGCTCC+GGG 0.570402 8_1:+89578423 Msa1224560:CDS
CAAGACCCTACTGGTTGGAC+TGG 0.573914 8_1:+89578601 Msa1224560:CDS
GCGGCAGCGGCAGACACCAA+AGG 0.577737 8_1:-89573000 None:intergenic
GTCATGAGTGATTACAGGGA+TGG 0.580278 8_1:+89573977 Msa1224560:CDS
ATCAAACAAAGCATCGCTTG+TGG 0.584167 8_1:-89573888 None:intergenic
TACTACAAGACCCTACTGGT+TGG 0.586463 8_1:+89578596 Msa1224560:CDS
AAAAGACCAGTCCAACCAGT+AGG 0.594037 8_1:-89578607 None:intergenic
AACGCAGATCAAAAGCTACA+TGG 0.594334 8_1:-89578686 None:intergenic
TCAACGACAAGGGCAACATA+GGG 0.594974 8_1:+89578202 Msa1224560:CDS
ATTAAATGCCACCATAGACT+TGG 0.597479 8_1:-89578343 None:intergenic
ATCACAAATCACAAGGCTCA+AGG 0.601072 8_1:+89574469 Msa1224560:CDS
AAGGCTCAAGGAATTGATAC+GGG 0.604072 8_1:+89574481 Msa1224560:CDS
AAAGACCAGTCCAACCAGTA+GGG 0.607927 8_1:-89578606 None:intergenic
TTCCAACTTATCATGAAACA+CGG 0.609205 8_1:-89574422 None:intergenic
CTCATCATATCCCGATCAGT+GGG 0.609425 8_1:+89572919 Msa1224560:five_prime_UTR
TTGATGTTCCTCTGGCAGCA+AGG 0.614555 8_1:-89574569 None:intergenic
TAAACTACTAACCAGTCTCA+TGG 0.620534 8_1:-89574618 None:intergenic
CAAAGTCAACAATCATCCAT+GGG 0.622007 8_1:-89578152 None:intergenic
CTTGAGCAACCCGAACATGT+GGG 0.625028 8_1:+89578461 Msa1224560:CDS
ACTCATCATATCCCGATCAG+TGG 0.627863 8_1:+89572918 Msa1224560:five_prime_UTR
AGAAGTCATGAGTGATTACA+GGG 0.629088 8_1:+89573973 Msa1224560:CDS
CGCGACAAAGAAGTTACGCT+AGG 0.633955 8_1:-89578276 None:intergenic
ATTCAACAATGGGATACCCA+TGG 0.636286 8_1:+89578136 Msa1224560:CDS
AAGAGATAAAAGAAAATCAG+CGG 0.638548 8_1:-89573019 None:intergenic
ATTCAATGCCTTGCTGCCAG+AGG 0.639665 8_1:+89574561 Msa1224560:CDS
ACAAGTTATCACAAATCACA+AGG 0.640420 8_1:+89574462 Msa1224560:CDS
TATATATGTTGTCAACGACA+AGG 0.653477 8_1:+89578191 Msa1224560:CDS
TGTCAAAAGCAAGCAAGACA+CGG 0.654737 8_1:-89578023 None:intergenic
CTGTTGCAAGATCATAAACA+AGG 0.655865 8_1:+89574355 Msa1224560:CDS
GAGATTTGGAAATGATATCG+AGG 0.657764 8_1:-89577660 None:intergenic
TTGAGCAACCCGAACATGTG+GGG 0.659897 8_1:+89578462 Msa1224560:CDS
ATATATGTTGTCAACGACAA+GGG 0.666270 8_1:+89578192 Msa1224560:CDS
TTGTGTGTGTAAGAATTGGA+GGG 0.670781 8_1:+89577711 Msa1224560:CDS
GGTTCATACCAAGTCTATGG+TGG 0.672324 8_1:+89578335 Msa1224560:CDS
AAGGCATAGTAGTTTCCACC+CGG 0.674044 8_1:-89578441 None:intergenic
AAAATGCAAAGTGTATGTAG+GGG 0.684341 8_1:+89578527 Msa1224560:CDS
GCATTATTATATGCTCCGGG+TGG 0.696983 8_1:+89578426 Msa1224560:CDS
GCTCAAGGAATTGATACGGG+AGG 0.704641 8_1:+89574484 Msa1224560:CDS
GTGGATATTTGATCATGACA+GGG 0.707619 8_1:+89577905 Msa1224560:CDS
GATGGACGAATTGATCCAAG+AGG 0.740587 8_1:+89573995 Msa1224560:CDS
ACTGATCGGGATATGATGAG+TGG 0.752974 8_1:-89572916 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAATTAAATTGAATTTAT+TGG + chr8_1:89573117-89573136 Msa1224560:intron 10.0%
!! AAATTCAACAATATAAATAA+TGG - chr8_1:89573591-89573610 None:intergenic 10.0%
!!! ATTAATGTAAAATATGTTTT+AGG + chr8_1:89573730-89573749 Msa1224560:intron 10.0%
!!! AAAATATGTTTTTAAAGTTT+TGG + chr8_1:89573772-89573791 Msa1224560:intron 10.0%
!!! AAATATGTTTTTAAAGTTTT+GGG + chr8_1:89573773-89573792 Msa1224560:intron 10.0%
!!! CATAATTTTGTTAAAAATTT+TGG + chr8_1:89576039-89576058 Msa1224560:intron 10.0%
!! AAAAAAAAAAAAAAAAGACA+TGG - chr8_1:89577095-89577114 None:intergenic 10.0%
!! TAAAGCCTATTTAATTAAAT+AGG + chr8_1:89573528-89573547 Msa1224560:intron 15.0%
!! TATAGCCTATTTAATTAAAT+AGG - chr8_1:89573536-89573555 None:intergenic 15.0%
!!! ATAAATAATGGAAGATATAT+GGG - chr8_1:89573579-89573598 None:intergenic 15.0%
!!! TATAAATAATGGAAGATATA+TGG - chr8_1:89573580-89573599 None:intergenic 15.0%
!!! TATGTTTTAAATAGATTTTC+AGG + chr8_1:89573845-89573864 Msa1224560:intron 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr8_1:89575587-89575606 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr8_1:89575586-89575605 Msa1224560:intron 15.0%
!! AAACTAAAGTAAAAAGATAA+GGG + chr8_1:89575587-89575606 Msa1224560:intron 15.0%
!!! TTAATTTTATTAGTGTTTTG+TGG - chr8_1:89576232-89576251 None:intergenic 15.0%
!! CAAAACACTAATAAAATTAA+AGG + chr8_1:89576232-89576251 Msa1224560:intron 15.0%
!! ACATTATTATAGATAAAGAA+TGG - chr8_1:89576331-89576350 None:intergenic 15.0%
!! TTATGAAACTGAAATTTAAT+AGG - chr8_1:89576923-89576942 None:intergenic 15.0%
!!! ATCATTTTAGTATCTTTTTT+TGG + chr8_1:89576984-89577003 Msa1224560:intron 15.0%
!!! TTGTTAATATTTTATGCTTT+CGG + chr8_1:89577134-89577153 Msa1224560:intron 15.0%
!!! ATAAGAAAAATTGACTTTAA+AGG - chr8_1:89577995-89578014 None:intergenic 15.0%
!! AGAAAGATAAAAACAAAAAG+TGG - chr8_1:89573047-89573066 None:intergenic 20.0%
!!! AATCAGTTGATATTGAATTA+GGG - chr8_1:89573174-89573193 None:intergenic 20.0%
!! TTATCATTAGCATAAAACAT+TGG + chr8_1:89573270-89573289 Msa1224560:intron 20.0%
!! AATATATAAGACACAAAAGA+TGG + chr8_1:89573336-89573355 Msa1224560:intron 20.0%
!!! CATTTTTTGTTTACTTGATA+GGG + chr8_1:89573419-89573438 Msa1224560:intron 20.0%
!!! ATTTTTTGTTTACTTGATAG+GGG + chr8_1:89573420-89573439 Msa1224560:intron 20.0%
!!! TTTAGTAGTAGTAAACTTTT+AGG + chr8_1:89573799-89573818 Msa1224560:intron 20.0%
!! TTCCCAAAATTAAATGTTTA+TGG - chr8_1:89574054-89574073 None:intergenic 20.0%
!! AGTATGATTTCATAATTCTT+TGG - chr8_1:89574091-89574110 None:intergenic 20.0%
!!! AGACCATACAAATTTAATTT+TGG + chr8_1:89574537-89574556 Msa1224560:CDS 20.0%
!!! GACCATACAAATTTAATTTT+GGG + chr8_1:89574538-89574557 Msa1224560:CDS 20.0%
!! ATCCCAAAATTAAATTTGTA+TGG - chr8_1:89574543-89574562 None:intergenic 20.0%
!!! TGTTGATTTGTTTCTTATTT+TGG - chr8_1:89574787-89574806 None:intergenic 20.0%
!! CTTGTCTAATTATGTTTATT+TGG - chr8_1:89574857-89574876 None:intergenic 20.0%
!! ATAAACATAATTAGACAAGT+TGG + chr8_1:89574858-89574877 Msa1224560:intron 20.0%
!! ACTCATTAATTCTTTCTTAA+CGG + chr8_1:89574979-89574998 Msa1224560:intron 20.0%
!! TAGAAAAGATCATTGAAAAT+AGG - chr8_1:89575098-89575117 None:intergenic 20.0%
!! TAAGTCGAATATCTTTAAAT+TGG + chr8_1:89575182-89575201 Msa1224560:intron 20.0%
!! AGAAATATAAGAGAAATAGA+AGG - chr8_1:89575278-89575297 None:intergenic 20.0%
!!! TTTAGTTTTGGATGTATTTA+TGG - chr8_1:89575575-89575594 None:intergenic 20.0%
!!! CTTTATAATTTGTGCAATTT+TGG + chr8_1:89575974-89575993 Msa1224560:intron 20.0%
!! ATAGATAAAGAATGGAAAAA+GGG - chr8_1:89576323-89576342 None:intergenic 20.0%
!! TATAGATAAAGAATGGAAAA+AGG - chr8_1:89576324-89576343 None:intergenic 20.0%
!! TTGAAAGAATTAGATAGTTT+AGG - chr8_1:89576402-89576421 None:intergenic 20.0%
!!! AATTTTATGTTTGTTTGTCT+AGG + chr8_1:89576727-89576746 Msa1224560:intron 20.0%
!! ATATGTAGTATTATCGATAA+AGG - chr8_1:89576849-89576868 None:intergenic 20.0%
!! GATATGTAGTATTATTCATT+CGG - chr8_1:89576895-89576914 None:intergenic 20.0%
!! ATGGATAAAGAAATAAGAAA+AGG - chr8_1:89577037-89577056 None:intergenic 20.0%
!!! TCTTTCTTTTTCTTTTTTGA+TGG + chr8_1:89577202-89577221 Msa1224560:intron 20.0%
!!! CTTTCTTTTTCTTTTTTGAT+GGG + chr8_1:89577203-89577222 Msa1224560:intron 20.0%
!!! TTGTTAATAATTTGTGCTTT+CGG + chr8_1:89577286-89577305 Msa1224560:intron 20.0%
!! ATAATGTTAATTTCAATGTG+AGG + chr8_1:89577312-89577331 Msa1224560:intron 20.0%
!! AACTGCTTATATTAAAAAGA+AGG + chr8_1:89577394-89577413 Msa1224560:intron 20.0%
!! ACTCAAAATTGTATTGTATT+GGG + chr8_1:89577423-89577442 Msa1224560:intron 20.0%
!! TGAAAATTTCATGTAAAATG+CGG - chr8_1:89577478-89577497 None:intergenic 20.0%
!!! AAAAATTGACTTTAAAGGTT+GGG - chr8_1:89577990-89578009 None:intergenic 20.0%
! AAGAGATAAAAGAAAATCAG+CGG - chr8_1:89573022-89573041 None:intergenic 25.0%
! AATGAAAATTCATACCTGAT+TGG - chr8_1:89573070-89573089 None:intergenic 25.0%
!! GAATCAGTTGATATTGAATT+AGG - chr8_1:89573175-89573194 None:intergenic 25.0%
!!! AACTTCTTTTTTATGATCAG+CGG + chr8_1:89573237-89573256 Msa1224560:intron 25.0%
! CCTATCAAGTAAACAAAAAA+TGG - chr8_1:89573421-89573440 None:intergenic 25.0%
!!! CCATTTTTTGTTTACTTGAT+AGG + chr8_1:89573418-89573437 Msa1224560:intron 25.0%
!!! TATGGGTTTAATAGGTTTTT+TGG - chr8_1:89573562-89573581 None:intergenic 25.0%
!!! AGGCCATAAACATTTAATTT+TGG + chr8_1:89574048-89574067 Msa1224560:CDS 25.0%
!!! GGCCATAAACATTTAATTTT+GGG + chr8_1:89574049-89574068 Msa1224560:CDS 25.0%
!!! CATATGTTGATAATTTCTGT+TGG + chr8_1:89574659-89574678 Msa1224560:intron 25.0%
! TAAATCCTTTCTCAAATACT+AGG + chr8_1:89574811-89574830 Msa1224560:intron 25.0%
! TAATGAGTCGAATCAAAATA+TGG - chr8_1:89574967-89574986 None:intergenic 25.0%
! AGATCATTGAAAATAGGTTT+AGG - chr8_1:89575092-89575111 None:intergenic 25.0%
! TCGAATATCTTTAAATTGGA+TGG + chr8_1:89575186-89575205 Msa1224560:intron 25.0%
! CGAATATCTTTAAATTGGAT+GGG + chr8_1:89575187-89575206 Msa1224560:intron 25.0%
! GAATATCTTTAAATTGGATG+GGG + chr8_1:89575188-89575207 Msa1224560:intron 25.0%
! AATATCTTTAAATTGGATGG+GGG + chr8_1:89575189-89575208 Msa1224560:intron 25.0%
!! AACAATTTTCCCATAACAAT+AGG - chr8_1:89575637-89575656 None:intergenic 25.0%
! GTTATCAATGATATGTATGA+GGG - chr8_1:89575697-89575716 None:intergenic 25.0%
! AGTTATCAATGATATGTATG+AGG - chr8_1:89575698-89575717 None:intergenic 25.0%
! ATTGATCCACTACAAAATTT+AGG + chr8_1:89576258-89576277 Msa1224560:intron 25.0%
! ATTATGGATGTCAAAAGAAA+AGG - chr8_1:89576299-89576318 None:intergenic 25.0%
!! TAGTTTAGGACATTAAACAT+TGG - chr8_1:89576388-89576407 None:intergenic 25.0%
!!! GTATGATTCATTTTGAAACA+TGG - chr8_1:89576493-89576512 None:intergenic 25.0%
! TTTGTCCAATCTCTATAATA+AGG - chr8_1:89576708-89576727 None:intergenic 25.0%
! ATTCGGAATTGGAATTTAAT+AGG - chr8_1:89576878-89576897 None:intergenic 25.0%
! TAGTATTATTCATTCGGAAT+TGG - chr8_1:89576889-89576908 None:intergenic 25.0%
!!! TTAGAATGTTTTTTCATGTG+AGG + chr8_1:89577158-89577177 Msa1224560:intron 25.0%
!!! TTTTCTTTTTTGATGGGATT+TGG + chr8_1:89577209-89577228 Msa1224560:intron 25.0%
!!! TTTCTTTTTTGATGGGATTT+GGG + chr8_1:89577210-89577229 Msa1224560:intron 25.0%
!! TGTTAATAATTTGTGCTTTC+GGG + chr8_1:89577287-89577306 Msa1224560:intron 25.0%
! CACTCAAAATTGTATTGTAT+TGG + chr8_1:89577422-89577441 Msa1224560:intron 25.0%
! AATTGTATTGTATTGGGAAA+AGG + chr8_1:89577429-89577448 Msa1224560:intron 25.0%
! ATTGTATTGTATTGGGAAAA+GGG + chr8_1:89577430-89577449 Msa1224560:intron 25.0%
! AAAATTTCATGTAAAATGCG+GGG - chr8_1:89577476-89577495 None:intergenic 25.0%
! GAAAATTTCATGTAAAATGC+GGG - chr8_1:89577477-89577496 None:intergenic 25.0%
! GGAAAAAGATTTCTTGAAAA+AGG - chr8_1:89577803-89577822 None:intergenic 25.0%
! CAAAGATGATCAATTATTTC+TGG + chr8_1:89577857-89577876 Msa1224560:CDS 25.0%
!! TTTTGCTAATGAATCCATTT+AGG + chr8_1:89577941-89577960 Msa1224560:CDS 25.0%
!! AAAATTGACTTTAAAGGTTG+GGG - chr8_1:89577989-89578008 None:intergenic 25.0%
!! GAAAAATTGACTTTAAAGGT+TGG - chr8_1:89577991-89578010 None:intergenic 25.0%
!! GTTTATCAATCTCGAAATTT+TGG + chr8_1:89578102-89578121 Msa1224560:CDS 25.0%
!!! TATGTCAAGTTGAAAACTTT+GGG + chr8_1:89578396-89578415 Msa1224560:CDS 25.0%
!!! TCTTTTTGTTTGCCAATAAT+TGG + chr8_1:89578730-89578749 Msa1224560:three_prime_UTR 25.0%
! GTTTTTATCTTTCTCCAATC+AGG + chr8_1:89573053-89573072 Msa1224560:five_prime_UTR 30.0%
TTTACACATTGTAAAGCGAA+AGG - chr8_1:89573102-89573121 None:intergenic 30.0%
TAGAAAGCTTAGCTTAACAA+TGG - chr8_1:89573197-89573216 None:intergenic 30.0%
! GCTTTAAATAGACTAGATCT+TGG - chr8_1:89573475-89573494 None:intergenic 30.0%
GGAAGATATATGGGTTTAAT+AGG - chr8_1:89573570-89573589 None:intergenic 30.0%
TTTCATGTCTTCGTATGATT+TGG + chr8_1:89573613-89573632 Msa1224560:intron 30.0%
GCAGATATATTAGTGTGATT+AGG + chr8_1:89573646-89573665 Msa1224560:intron 30.0%
AGTTGTGTTTCAAGATAAGA+TGG + chr8_1:89574171-89574190 Msa1224560:CDS 30.0%
ATTGCGATGAAGCTATTTAA+AGG + chr8_1:89574268-89574287 Msa1224560:CDS 30.0%
TTGCGATGAAGCTATTTAAA+GGG + chr8_1:89574269-89574288 Msa1224560:CDS 30.0%
TTCCAACTTATCATGAAACA+CGG - chr8_1:89574425-89574444 None:intergenic 30.0%
ACAAGTTATCACAAATCACA+AGG + chr8_1:89574462-89574481 Msa1224560:CDS 30.0%
! ATATATCAAGGTGCTTAGTT+TGG - chr8_1:89574740-89574759 None:intergenic 30.0%
TTGGGAATGATCATATATCA+AGG - chr8_1:89574752-89574771 None:intergenic 30.0%
TAGAACCTAGTATTTGAGAA+AGG - chr8_1:89574819-89574838 None:intergenic 30.0%
TTTCTCAAATACTAGGTTCT+AGG + chr8_1:89574818-89574837 Msa1224560:intron 30.0%
TTGTAGCAAGGAGAATAAAT+TGG - chr8_1:89575064-89575083 None:intergenic 30.0%
TCATTGAAAATAGGTTTAGG+TGG - chr8_1:89575089-89575108 None:intergenic 30.0%
ATCTATTAGAGAGATAGTTG+GGG - chr8_1:89575133-89575152 None:intergenic 30.0%
CATCTATTAGAGAGATAGTT+GGG - chr8_1:89575134-89575153 None:intergenic 30.0%
CTCTCTAATAGATGGAAAAT+AGG + chr8_1:89575140-89575159 Msa1224560:intron 30.0%
AGATGGAAAATAGGTTTAAG+TGG + chr8_1:89575149-89575168 Msa1224560:intron 30.0%
!! TATTTAAACCGTGTTACTTG+TGG + chr8_1:89575325-89575344 Msa1224560:intron 30.0%
CTTCAAATAAGCATACAACT+CGG + chr8_1:89575529-89575548 Msa1224560:intron 30.0%
AAGTAAAAAGATAAGGGTTC+AGG + chr8_1:89575593-89575612 Msa1224560:intron 30.0%
AGTAAAAAGATAAGGGTTCA+GGG + chr8_1:89575594-89575613 Msa1224560:intron 30.0%
TGTTATGGGAAAATTGTTTG+TGG + chr8_1:89575639-89575658 Msa1224560:intron 30.0%
AAGTAAGTAGGTCGATTATA+TGG + chr8_1:89575861-89575880 Msa1224560:intron 30.0%
CAATCTTTCTTGTAACTTCA+TGG + chr8_1:89575930-89575949 Msa1224560:intron 30.0%
!!! TTTTTTGAAGGTAGGGTATT+GGG - chr8_1:89576072-89576091 None:intergenic 30.0%
!!! ATTTTTTGAAGGTAGGGTAT+TGG - chr8_1:89576073-89576092 None:intergenic 30.0%
!!! GTGGAAATTTTTTGAAGGTA+GGG - chr8_1:89576079-89576098 None:intergenic 30.0%
AAAAATTTCCACCCTTCAAT+AGG + chr8_1:89576087-89576106 Msa1224560:intron 30.0%
GTGACAAAATACCTATTGAA+GGG - chr8_1:89576101-89576120 None:intergenic 30.0%
! CATAGTCCTAAATTTTGTAG+TGG - chr8_1:89576267-89576286 None:intergenic 30.0%
ATGTCAAAAGAAAAGGAGAT+CGG - chr8_1:89576292-89576311 None:intergenic 30.0%
!! AGAATGGAAAAAGGGTATTA+TGG - chr8_1:89576315-89576334 None:intergenic 30.0%
TATAGTTAGATCGAGAAATG+GGG - chr8_1:89576357-89576376 None:intergenic 30.0%
GTATAGTTAGATCGAGAAAT+GGG - chr8_1:89576358-89576377 None:intergenic 30.0%
GACATTAAACATTGGTAAAC+TGG - chr8_1:89576380-89576399 None:intergenic 30.0%
AAACAGTAGACACTATAACT+AGG - chr8_1:89576439-89576458 None:intergenic 30.0%
CATGTGTGAATGAAGAATTT+CGG - chr8_1:89576524-89576543 None:intergenic 30.0%
CGCGTATGAATATAGAATTT+AGG - chr8_1:89576554-89576573 None:intergenic 30.0%
!! TGCTTATTTTTCACTGCAAA+CGG + chr8_1:89576596-89576615 Msa1224560:intron 30.0%
! TTAACTATACACGTTGCTTT+CGG + chr8_1:89576657-89576676 Msa1224560:intron 30.0%
CATTCTCACTATTACGTATT+TGG + chr8_1:89576681-89576700 Msa1224560:intron 30.0%
TTGGTCCTTATTATAGAGAT+TGG + chr8_1:89576700-89576719 Msa1224560:intron 30.0%
AACACAACCGTCATTTAATT+AGG + chr8_1:89576753-89576772 Msa1224560:intron 30.0%
TACCATGCCTAATTAAATGA+CGG - chr8_1:89576763-89576782 None:intergenic 30.0%
CATTTAATTAGGCATGGTAT+TGG + chr8_1:89576764-89576783 Msa1224560:intron 30.0%
TGCATAGCAAGGATAAAAAT+CGG + chr8_1:89576790-89576809 Msa1224560:intron 30.0%
TATTTCTTTATCCATGCTGA+TGG + chr8_1:89577042-89577061 Msa1224560:intron 30.0%
ATTTCTTTATCCATGCTGAT+GGG + chr8_1:89577043-89577062 Msa1224560:intron 30.0%
!!! TTCTTTTTTGATGGGATTTG+GGG + chr8_1:89577211-89577230 Msa1224560:intron 30.0%
ATGCAAAGGGAAAAAAAGAA+TGG + chr8_1:89577606-89577625 Msa1224560:intron 30.0%
! GAAGACTTTTGAACAAGTAA+TGG - chr8_1:89577781-89577800 None:intergenic 30.0%
TCTTTGAACGATAAACTTGT+TGG - chr8_1:89577843-89577862 None:intergenic 30.0%
!! ATCAATCTCGAAATTTTGGT+TGG + chr8_1:89578106-89578125 Msa1224560:CDS 30.0%
!!! TCAATCTCGAAATTTTGGTT+GGG + chr8_1:89578107-89578126 Msa1224560:CDS 30.0%
TTGGGTTACTTATTCAACAA+TGG + chr8_1:89578125-89578144 Msa1224560:CDS 30.0%
TGGGTTACTTATTCAACAAT+GGG + chr8_1:89578126-89578145 Msa1224560:CDS 30.0%
TATATATGTTGTCAACGACA+AGG + chr8_1:89578191-89578210 Msa1224560:CDS 30.0%
ATATATGTTGTCAACGACAA+GGG + chr8_1:89578192-89578211 Msa1224560:CDS 30.0%
TTTCAACTTGACATACTTCA+TGG - chr8_1:89578391-89578410 None:intergenic 30.0%
!! GTATGTCAAGTTGAAAACTT+TGG + chr8_1:89578395-89578414 Msa1224560:CDS 30.0%
CATTGCATTATTATATGCTC+CGG + chr8_1:89578422-89578441 Msa1224560:CDS 30.0%
ATTGCATTATTATATGCTCC+GGG + chr8_1:89578423-89578442 Msa1224560:CDS 30.0%
ACAAAATGCAAAGTGTATGT+AGG + chr8_1:89578525-89578544 Msa1224560:CDS 30.0%
CAAAATGCAAAGTGTATGTA+GGG + chr8_1:89578526-89578545 Msa1224560:CDS 30.0%
AAAATGCAAAGTGTATGTAG+GGG + chr8_1:89578527-89578546 Msa1224560:CDS 30.0%
TTGAAGTCTACTCCAATTAT+TGG - chr8_1:89578745-89578764 None:intergenic 30.0%
TTTATGATCAGCGGTTGTTA+AGG + chr8_1:89573246-89573265 Msa1224560:intron 35.0%
!! TTTTGTTTACTTGATAGGGG+TGG + chr8_1:89573423-89573442 Msa1224560:intron 35.0%
! AAAAAGCATGAGCTTAGACT+AGG - chr8_1:89573507-89573526 None:intergenic 35.0%
CAGACATATTTGTGTGCTTT+AGG + chr8_1:89573696-89573715 Msa1224560:intron 35.0%
! GACATGTAGATTTTACTGCA+TGG - chr8_1:89573931-89573950 None:intergenic 35.0%
AGAAGTCATGAGTGATTACA+GGG + chr8_1:89573973-89573992 Msa1224560:CDS 35.0%
AGAGTGCATGAGTTGTTTAA+AGG + chr8_1:89574028-89574047 Msa1224560:CDS 35.0%
TGAAATCATACTTCCTCCAT+CGG + chr8_1:89574099-89574118 Msa1224560:CDS 35.0%
TACTTCTTGCCAGAAAGATA+CGG + chr8_1:89574319-89574338 Msa1224560:CDS 35.0%
AATGTGAATCCGTATCTTTC+TGG - chr8_1:89574331-89574350 None:intergenic 35.0%
TGTTTATGATCTTGCAACAG+TGG - chr8_1:89574355-89574374 None:intergenic 35.0%
CTGTTGCAAGATCATAAACA+AGG + chr8_1:89574355-89574374 Msa1224560:CDS 35.0%
TAAACTACTAACCAGTCTCA+TGG - chr8_1:89574621-89574640 None:intergenic 35.0%
CAGAGATGGTATAAACATGT+CGG - chr8_1:89574710-89574729 None:intergenic 35.0%
!! CAAATACTAGGTTCTAGGTT+AGG + chr8_1:89574823-89574842 Msa1224560:intron 35.0%
ATAGCGTAATTTGATCAACG+TGG - chr8_1:89574928-89574947 None:intergenic 35.0%
AGCAAGGAGAATAAATTGGA+TGG - chr8_1:89575060-89575079 None:intergenic 35.0%
CCATCTATTAGAGAGATAGT+TGG - chr8_1:89575135-89575154 None:intergenic 35.0%
CCAACTATCTCTCTAATAGA+TGG + chr8_1:89575132-89575151 Msa1224560:intron 35.0%
!!! TTCTCTGTCGTTTTGTACTA+TGG + chr8_1:89575294-89575313 Msa1224560:intron 35.0%
ATGTCATACCACAAGTAACA+CGG - chr8_1:89575336-89575355 None:intergenic 35.0%
ATCTTCAACTTTCACCTCTA+AGG + chr8_1:89575357-89575376 Msa1224560:intron 35.0%
ACTCTCTGTTCTTTCTACTT+AGG + chr8_1:89575419-89575438 Msa1224560:intron 35.0%
CTCTCTGTTCTTTCTACTTA+GGG + chr8_1:89575420-89575439 Msa1224560:intron 35.0%
TCTCTGTTCTTTCTACTTAG+GGG + chr8_1:89575421-89575440 Msa1224560:intron 35.0%
GAAGATAATGTAGTCCTGTT+TGG - chr8_1:89575513-89575532 None:intergenic 35.0%
!! TGGAAAGCTCTAGAGAAAAA+AGG - chr8_1:89575742-89575761 None:intergenic 35.0%
GCTTTCCACAAAAATTGTCT+AGG + chr8_1:89575754-89575773 Msa1224560:intron 35.0%
TATCATGCGTTGAAGTAAGT+AGG + chr8_1:89575849-89575868 Msa1224560:intron 35.0%
CAAAGCAAATGTTAGACAAG+TGG - chr8_1:89576018-89576037 None:intergenic 35.0%
!!! GGTGGAAATTTTTTGAAGGT+AGG - chr8_1:89576080-89576099 None:intergenic 35.0%
!!! GAAGGGTGGAAATTTTTTGA+AGG - chr8_1:89576084-89576103 None:intergenic 35.0%
ACAAAATACCTATTGAAGGG+TGG - chr8_1:89576098-89576117 None:intergenic 35.0%
CGTGACAAAATACCTATTGA+AGG - chr8_1:89576102-89576121 None:intergenic 35.0%
AGGTAAAAGAAGAGTTGACA+AGG - chr8_1:89576149-89576168 None:intergenic 35.0%
ACTACTAATTCAAGAACACG+AGG - chr8_1:89576169-89576188 None:intergenic 35.0%
! TGTTTTGTGGTTAGAAGAAC+AGG - chr8_1:89576219-89576238 None:intergenic 35.0%
GGTATAGTTAGATCGAGAAA+TGG - chr8_1:89576359-89576378 None:intergenic 35.0%
!! GCTTATTTTTCACTGCAAAC+GGG + chr8_1:89576597-89576616 Msa1224560:intron 35.0%
GCAACGTGTATAGTTAAAAG+CGG - chr8_1:89576654-89576673 None:intergenic 35.0%
! TAACTATACACGTTGCTTTC+GGG + chr8_1:89576658-89576677 Msa1224560:intron 35.0%
AACCGTCATTTAATTAGGCA+TGG + chr8_1:89576758-89576777 Msa1224560:intron 35.0%
AAGAAAAGGCAAAAGTAGTC+AGG - chr8_1:89577023-89577042 None:intergenic 35.0%
TTGTCATTGTTGTGATGCAA+AGG + chr8_1:89577592-89577611 Msa1224560:intron 35.0%
TGTCATTGTTGTGATGCAAA+GGG + chr8_1:89577593-89577612 Msa1224560:intron 35.0%
GGAAAAAAAGAATGGTAGCA+GGG + chr8_1:89577614-89577633 Msa1224560:CDS 35.0%
AGGGAACTATCAACTTTCTT+GGG + chr8_1:89577633-89577652 Msa1224560:CDS 35.0%
GAGATTTGGAAATGATATCG+AGG - chr8_1:89577663-89577682 None:intergenic 35.0%
GTCATCAAAGTCTAGAGATT+TGG - chr8_1:89577677-89577696 None:intergenic 35.0%
ACACACAAGCAAATTGAAAG+AGG - chr8_1:89577699-89577718 None:intergenic 35.0%
TTGCTTGTGTGTGTAAGAAT+TGG + chr8_1:89577707-89577726 Msa1224560:CDS 35.0%
TTGTGTGTGTAAGAATTGGA+GGG + chr8_1:89577711-89577730 Msa1224560:CDS 35.0%
GGGCATTTCATAAGATGTAT+TGG + chr8_1:89577731-89577750 Msa1224560:CDS 35.0%
GATGTATTGGAGAGATTTCT+TGG + chr8_1:89577744-89577763 Msa1224560:CDS 35.0%
TTGGTTAGGTATGCTGATAA+AGG - chr8_1:89577824-89577843 None:intergenic 35.0%
!! GAACGATAAACTTGTTGGTT+AGG - chr8_1:89577838-89577857 None:intergenic 35.0%
TCCATTTAGGAGAAGAAAGA+AGG + chr8_1:89577954-89577973 Msa1224560:CDS 35.0%
ACCTTCTTTCTTCTCCTAAA+TGG - chr8_1:89577958-89577977 None:intergenic 35.0%
CAAAGTCAACAATCATCCAT+GGG - chr8_1:89578155-89578174 None:intergenic 35.0%
ACAAAGTCAACAATCATCCA+TGG - chr8_1:89578156-89578175 None:intergenic 35.0%
! TTGTGACGAACAACTTTTTG+TGG + chr8_1:89578314-89578333 Msa1224560:CDS 35.0%
ATTAAATGCCACCATAGACT+TGG - chr8_1:89578346-89578365 None:intergenic 35.0%
TCATGTGACCTAATGTACTT+TGG - chr8_1:89578567-89578586 None:intergenic 35.0%
ATCGCAATAAACCCACTGAT+CGG - chr8_1:89572933-89572952 None:intergenic 40.0%
TAAAAGAAAATCAGCGGCAG+CGG - chr8_1:89573016-89573035 None:intergenic 40.0%
! AAACGCATCGTTGCTTTAGT+TGG + chr8_1:89573140-89573159 Msa1224560:intron 40.0%
TTACACTAAGGTTGGAGATG+TGG - chr8_1:89573378-89573397 None:intergenic 40.0%
CTCTTAGGTTACACTAAGGT+TGG - chr8_1:89573386-89573405 None:intergenic 40.0%
TGTGCTCTTAGGTTACACTA+AGG - chr8_1:89573390-89573409 None:intergenic 40.0%
!! ATCAAACAAAGCATCGCTTG+TGG - chr8_1:89573891-89573910 None:intergenic 40.0%
CAGAAGTCATGAGTGATTAC+AGG + chr8_1:89573972-89573991 Msa1224560:CDS 40.0%
! TTCAGTTTTTCATCCGATGG+AGG - chr8_1:89574115-89574134 None:intergenic 40.0%
! CGATTCAGTTTTTCATCCGA+TGG - chr8_1:89574118-89574137 None:intergenic 40.0%
!! AGGGCATGTCGATTTACTTT+CGG + chr8_1:89574288-89574307 Msa1224560:CDS 40.0%
AGCCGTGTTTCATGATAAGT+TGG + chr8_1:89574420-89574439 Msa1224560:CDS 40.0%
ATCACAAATCACAAGGCTCA+AGG + chr8_1:89574469-89574488 Msa1224560:CDS 40.0%
CAAGGCTCAAGGAATTGATA+CGG + chr8_1:89574480-89574499 Msa1224560:CDS 40.0%
AAGGCTCAAGGAATTGATAC+GGG + chr8_1:89574481-89574500 Msa1224560:CDS 40.0%
AGTGTGATTTGATGTTCCTC+TGG - chr8_1:89574580-89574599 None:intergenic 40.0%
TCATGGCAATGAAGCTCAAA+TGG - chr8_1:89574604-89574623 None:intergenic 40.0%
!!! TTTTGGTGCTGCATGTTGTT+GGG - chr8_1:89574770-89574789 None:intergenic 40.0%
!!! ATTTTGGTGCTGCATGTTGT+TGG - chr8_1:89574771-89574790 None:intergenic 40.0%
!! ACCAAGCCTTGTTTCAAAAG+CGG + chr8_1:89574896-89574915 Msa1224560:intron 40.0%
!!! CCAATACCGCTTTTGAAACA+AGG - chr8_1:89574905-89574924 None:intergenic 40.0%
! CCTTGTTTCAAAAGCGGTAT+TGG + chr8_1:89574902-89574921 Msa1224560:intron 40.0%
!!! GTTTAGGTGGTTTTGTAGCA+AGG - chr8_1:89575076-89575095 None:intergenic 40.0%
! GCTAAGTAGTTCTACCTTAG+AGG - chr8_1:89575374-89575393 None:intergenic 40.0%
CTCTGTTCTTTCTACTTAGG+GGG + chr8_1:89575422-89575441 Msa1224560:intron 40.0%
TAAGCATACAACTCGGAGTT+AGG + chr8_1:89575536-89575555 Msa1224560:intron 40.0%
TAACAATAGGATTGCGCCAA+GGG - chr8_1:89575624-89575643 None:intergenic 40.0%
ATAACAATAGGATTGCGCCA+AGG - chr8_1:89575625-89575644 None:intergenic 40.0%
TTGGCGCAATCCTATTGTTA+TGG + chr8_1:89575624-89575643 Msa1224560:intron 40.0%
TGGCGCAATCCTATTGTTAT+GGG + chr8_1:89575625-89575644 Msa1224560:intron 40.0%
! GAGTGCCTAGACAATTTTTG+TGG - chr8_1:89575762-89575781 None:intergenic 40.0%
! CATGATAGAGTGCTATAGGA+TGG - chr8_1:89575836-89575855 None:intergenic 40.0%
! AACGCATGATAGAGTGCTAT+AGG - chr8_1:89575840-89575859 None:intergenic 40.0%
ATTATATGGTCGTCCTTCCT+TGG + chr8_1:89575875-89575894 Msa1224560:intron 40.0%
TTATATGGTCGTCCTTCCTT+GGG + chr8_1:89575876-89575895 Msa1224560:intron 40.0%
TAGACACTATAACTAGGAGG+AGG - chr8_1:89576433-89576452 None:intergenic 40.0%
CAGTAGACACTATAACTAGG+AGG - chr8_1:89576436-89576455 None:intergenic 40.0%
ATACGCGTTCACGAAGATAT+AGG + chr8_1:89576567-89576586 Msa1224560:intron 40.0%
! TATTTTTCACTGCAAACGGG+TGG + chr8_1:89576600-89576619 Msa1224560:intron 40.0%
GCAAGGATAAAAATCGGAAG+AGG + chr8_1:89576796-89576815 Msa1224560:intron 40.0%
TTATCCATGCTGATGGGATT+CGG + chr8_1:89577049-89577068 Msa1224560:intron 40.0%
GGGAAAAAAAGAATGGTAGC+AGG + chr8_1:89577613-89577632 Msa1224560:intron 40.0%
CAGGGAACTATCAACTTTCT+TGG + chr8_1:89577632-89577651 Msa1224560:CDS 40.0%
CTTGTGTGTGTAAGAATTGG+AGG + chr8_1:89577710-89577729 Msa1224560:CDS 40.0%
TTCTGGCACTTTGCATATTC+TGG + chr8_1:89577874-89577893 Msa1224560:CDS 40.0%
GCATATTCTGGATCTTCTAG+TGG + chr8_1:89577886-89577905 Msa1224560:CDS 40.0%
TGTCAAAAGCAAGCAAGACA+CGG - chr8_1:89578026-89578045 None:intergenic 40.0%
!! GTCTTGCTTGCTTTTGACAA+AGG + chr8_1:89578027-89578046 Msa1224560:CDS 40.0%
! CTCCAAGGATTTTGTCTTAG+TGG + chr8_1:89578050-89578069 Msa1224560:CDS 40.0%
AGCCACTAAGACAAAATCCT+TGG - chr8_1:89578055-89578074 None:intergenic 40.0%
ATTCAACAATGGGATACCCA+TGG + chr8_1:89578136-89578155 Msa1224560:CDS 40.0%
TGTGGTTCATACCAAGTCTA+TGG + chr8_1:89578332-89578351 Msa1224560:CDS 40.0%
TTTCATAACCCCACATGTTC+GGG - chr8_1:89578473-89578492 None:intergenic 40.0%
CTTTCATAACCCCACATGTT+CGG - chr8_1:89578474-89578493 None:intergenic 40.0%
ACAAGCTGCCAAAGTACATT+AGG + chr8_1:89578556-89578575 Msa1224560:CDS 40.0%
TTCATACTACAAGACCCTAC+TGG + chr8_1:89578592-89578611 Msa1224560:CDS 40.0%
AACGCAGATCAAAAGCTACA+TGG - chr8_1:89578689-89578708 None:intergenic 40.0%
! TGTAGCTTTTGATCTGCGTT+TGG + chr8_1:89578689-89578708 Msa1224560:three_prime_UTR 40.0%
ACTGATCGGGATATGATGAG+TGG - chr8_1:89572919-89572938 None:intergenic 45.0%
ACTCATCATATCCCGATCAG+TGG + chr8_1:89572918-89572937 Msa1224560:five_prime_UTR 45.0%
CTCATCATATCCCGATCAGT+GGG + chr8_1:89572919-89572938 Msa1224560:five_prime_UTR 45.0%
TCGCAATAAACCCACTGATC+GGG - chr8_1:89572932-89572951 None:intergenic 45.0%
ACTAAGGTTGGAGATGTGGA+TGG - chr8_1:89573374-89573393 None:intergenic 45.0%
TGGATGTCTCTTGTGCTCTT+AGG - chr8_1:89573401-89573420 None:intergenic 45.0%
CATGCTAAACCGTTCGTCAT+AGG + chr8_1:89573448-89573467 Msa1224560:intron 45.0%
GATCTTGGACCTATGACGAA+CGG - chr8_1:89573460-89573479 None:intergenic 45.0%
GTCATGAGTGATTACAGGGA+TGG + chr8_1:89573977-89573996 Msa1224560:CDS 45.0%
GATGGACGAATTGATCCAAG+AGG + chr8_1:89573995-89574014 Msa1224560:CDS 45.0%
ACTCTTGCTTTGACACCTCT+TGG - chr8_1:89574013-89574032 None:intergenic 45.0%
!! GGGCATGTCGATTTACTTTC+GGG + chr8_1:89574289-89574308 Msa1224560:CDS 45.0%
!! AATTGATACGGGAGGTGTTG+CGG + chr8_1:89574492-89574511 Msa1224560:CDS 45.0%
! AGTTTGGAGCACATCAGAGA+TGG - chr8_1:89574724-89574743 None:intergenic 45.0%
!!! ACCGCTTTTGAAACAAGGCT+TGG - chr8_1:89574900-89574919 None:intergenic 45.0%
AGACTTAAGACAAGCCGTAG+AGG - chr8_1:89575458-89575477 None:intergenic 45.0%
ATTCGAGAGAGGAACTGAGT+GGG - chr8_1:89575488-89575507 None:intergenic 45.0%
TACAACTCGGAGTTAGGTCT+TGG + chr8_1:89575542-89575561 Msa1224560:intron 45.0%
!! TTTGAAGGTAGGGTATTGGG+TGG - chr8_1:89576069-89576088 None:intergenic 45.0%
GAGTTGACAAGGATGAGCAA+TGG - chr8_1:89576138-89576157 None:intergenic 45.0%
AAGCGGAGTCAAATGAGCAA+GGG - chr8_1:89576637-89576656 None:intergenic 45.0%
AAAGCGGAGTCAAATGAGCA+AGG - chr8_1:89576638-89576657 None:intergenic 45.0%
!! GGTATTGGCTATGCATAGCA+AGG + chr8_1:89576779-89576798 Msa1224560:intron 45.0%
TATCCATGCTGATGGGATTC+GGG + chr8_1:89577050-89577069 Msa1224560:intron 45.0%
! TGCTTTTGACAAAGGCTCCA+AGG + chr8_1:89578035-89578054 Msa1224560:CDS 45.0%
TCAACGACAAGGGCAACATA+GGG + chr8_1:89578202-89578221 Msa1224560:CDS 45.0%
TAACTTCTTTGTCGCGCCTA+AGG + chr8_1:89578283-89578302 Msa1224560:CDS 45.0%
CGTCACAACTAACCAACCTT+AGG - chr8_1:89578302-89578321 None:intergenic 45.0%
GGTTCATACCAAGTCTATGG+TGG + chr8_1:89578335-89578354 Msa1224560:CDS 45.0%
GCATTATTATATGCTCCGGG+TGG + chr8_1:89578426-89578445 Msa1224560:CDS 45.0%
AAGGCATAGTAGTTTCCACC+CGG - chr8_1:89578444-89578463 None:intergenic 45.0%
TACTACAAGACCCTACTGGT+TGG + chr8_1:89578596-89578615 Msa1224560:CDS 45.0%
AAAGACCAGTCCAACCAGTA+GGG - chr8_1:89578609-89578628 None:intergenic 45.0%
AAAAGACCAGTCCAACCAGT+AGG - chr8_1:89578610-89578629 None:intergenic 45.0%
!!! TATTTGATTTTATTTTTTAT+TGG + chr8_1:89577539-89577558 Msa1224560:intron 5.0%
GCTCAAGGAATTGATACGGG+AGG + chr8_1:89574484-89574503 Msa1224560:CDS 50.0%
ATTCAATGCCTTGCTGCCAG+AGG + chr8_1:89574561-89574580 Msa1224560:CDS 50.0%
TTGATGTTCCTCTGGCAGCA+AGG - chr8_1:89574572-89574591 None:intergenic 50.0%
GAGCTTCATTGCCATGAGAC+TGG + chr8_1:89574607-89574626 Msa1224560:CDS 50.0%
GGGGAAGTCATACACCTCTA+CGG + chr8_1:89575441-89575460 Msa1224560:intron 50.0%
GATTCGAGAGAGGAACTGAG+TGG - chr8_1:89575489-89575508 None:intergenic 50.0%
CCTGTTTGGAGATTCGAGAG+AGG - chr8_1:89575499-89575518 None:intergenic 50.0%
CCTCTCTCGAATCTCCAAAC+AGG + chr8_1:89575496-89575515 Msa1224560:intron 50.0%
AGGGAGTTTCGACTAGTGTG+AGG - chr8_1:89575678-89575697 None:intergenic 50.0%
! AGAAAACCGACTCAAGCCCA+AGG - chr8_1:89575895-89575914 None:intergenic 50.0%
ATGAGCAATGGCAAAGCAGC+TGG - chr8_1:89576126-89576145 None:intergenic 50.0%
GAACAGGCTATGCATCAGAG+AGG - chr8_1:89576203-89576222 None:intergenic 50.0%
ATCCATGCTGATGGGATTCG+GGG + chr8_1:89577051-89577070 Msa1224560:intron 50.0%
TGGGATTCGGGGTCAGTAAA+AGG + chr8_1:89577062-89577081 Msa1224560:intron 50.0%
CGGGGTCAGTAAAAGGCTAA+AGG + chr8_1:89577069-89577088 Msa1224560:intron 50.0%
GTCAACGACAAGGGCAACAT+AGG + chr8_1:89578201-89578220 Msa1224560:CDS 50.0%
CGCGACAAAGAAGTTACGCT+AGG - chr8_1:89578279-89578298 None:intergenic 50.0%
TTCTTTGTCGCGCCTAAGGT+TGG + chr8_1:89578287-89578306 Msa1224560:CDS 50.0%
CTTGAGCAACCCGAACATGT+GGG + chr8_1:89578461-89578480 Msa1224560:CDS 50.0%
TTGAGCAACCCGAACATGTG+GGG + chr8_1:89578462-89578481 Msa1224560:CDS 50.0%
! TCGCGTCGACCTAGTTCCTT+TGG + chr8_1:89572984-89573003 Msa1224560:five_prime_UTR 55.0%
CGGCAGACACCAAAGGAACT+AGG - chr8_1:89572996-89573015 None:intergenic 55.0%
AAGGGTTCAGGGTTGACCCT+TGG + chr8_1:89575605-89575624 Msa1224560:intron 55.0%
TTCGACTAGTGTGAGGACGC+AGG - chr8_1:89575671-89575690 None:intergenic 55.0%
GTCCTTCCTTGGGCTTGAGT+CGG + chr8_1:89575886-89575905 Msa1224560:intron 55.0%
! AACCGACTCAAGCCCAAGGA+AGG - chr8_1:89575891-89575910 None:intergenic 55.0%
! GCAAACGGGTGGTAGTGTAG+CGG + chr8_1:89576611-89576630 Msa1224560:intron 55.0%
!! CCACATGTTCGGGTTGCTCA+AGG - chr8_1:89578463-89578482 None:intergenic 55.0%
CCTTGAGCAACCCGAACATG+TGG + chr8_1:89578460-89578479 Msa1224560:CDS 55.0%
! CAAGACCCTACTGGTTGGAC+TGG + chr8_1:89578601-89578620 Msa1224560:CDS 55.0%
GACCCCGAATCCCATCAGCA+TGG - chr8_1:89577056-89577075 None:intergenic 60.0%
GCGGCAGCGGCAGACACCAA+AGG - chr8_1:89573003-89573022 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 89572913 89578813 89572913 ID=Msa1224560;Name=Msa1224560
chr8_1 mRNA 89572913 89578813 89572913 ID=Msa1224560-mRNA-1;Parent=Msa1224560;Name=Msa1224560-mRNA-1;_AED=0.16;_eAED=0.16;_QI=181|1|1|1|0|0|3|142|602
chr8_1 exon 89572913 89573074 89572913 ID=Msa1224560-mRNA-1:exon:32498;Parent=Msa1224560-mRNA-1
chr8_1 exon 89573859 89574628 89573859 ID=Msa1224560-mRNA-1:exon:32499;Parent=Msa1224560-mRNA-1
chr8_1 exon 89577614 89578813 89577614 ID=Msa1224560-mRNA-1:exon:32500;Parent=Msa1224560-mRNA-1
chr8_1 five_prime_UTR 89572913 89573074 89572913 ID=Msa1224560-mRNA-1:five_prime_utr;Parent=Msa1224560-mRNA-1
chr8_1 five_prime_UTR 89573859 89573877 89573859 ID=Msa1224560-mRNA-1:five_prime_utr;Parent=Msa1224560-mRNA-1
chr8_1 CDS 89573878 89574628 89573878 ID=Msa1224560-mRNA-1:cds;Parent=Msa1224560-mRNA-1
chr8_1 CDS 89577614 89578671 89577614 ID=Msa1224560-mRNA-1:cds;Parent=Msa1224560-mRNA-1
chr8_1 three_prime_UTR 89578672 89578813 89578672 ID=Msa1224560-mRNA-1:three_prime_utr;Parent=Msa1224560-mRNA-1
Gene Sequence

>Msa1224560

ATGAATAGCTCCACAAGCGATGCTTTGTTTGATGATGCATGTGCGTATGACCATGCAGTAAAATCTACATGTCAAGAAAAGTATTCTGAATTTGCAGAAGTCATGAGTGATTACAGGGATGGACGAATTGATCCAAGAGGTGTCAAAGCAAGAGTGCATGAGTTGTTTAAAGGCCATAAACATTTAATTTTGGGAATCAACAACATCATGCCAAAGAATTATGAAATCATACTTCCTCCATCGGATGAAAAACTGAATCGACAAGATGCAACAACTTTTCTCAAACAAGTAAAAGTTGTGTTTCAAGATAAGATGGAAAAATATTATGAGTTTCTACAAGTCATACAAGACTACATGAATCTCACAATTGATATATTAGATGTCATCAAAATTGCGATGAAGCTATTTAAAGGGCATGTCGATTTACTTTCGGGATTCAACTACTTCTTGCCAGAAAGATACGGATTCACATTTCCACTGTTGCAAGATCATAAACAAGGTCATCAATTAGTGATAAAAGATGCATTTCTCAATGAAGTCAAAGCCGTGTTTCATGATAAGTTGGAAAAATATTTTGAGTTTTTACAAGTTATCACAAATCACAAGGCTCAAGGAATTGATACGGGAGGTGTTGCGGCAATAGTGAAAGAGTTATTTAAAGACCATACAAATTTAATTTTGGGATTCAATGCCTTGCTGCCAGAGGAACATCAAATCACACTTCCATTTGAGCTTCATTGCCATGAGACTGGGAAAAAAAGAATGGTAGCAGGGAACTATCAACTTTCTTGGGATGTCCTCGATATCATTTCCAAATCTCTAGACTTTGATGACCTCTTTCAATTTGCTTGTGTGTGTAAGAATTGGAGGGCATTTCATAAGATGTATTGGAGAGATTTCTTGGCATTACAAGAACCATTACTTGTTCAAAAGTCTTCCTTTTTCAAGAAATCTTTTTCCTTTATCAGCATACCTAACCAACAAGTTTATCGTTCAAAGATGATCAATTATTTCTGGCACTTTGCATATTCTGGATCTTCTAGTGGATATTTGATCATGACAGGGAACAATAATTCATTTTTGCTAATGAATCCATTTAGGAGAAGAAAGAAGGTAATCAATGCCCCAACCTTTAAAGTCAATTTTTCTTATTTTGCTTACCGTGTCTTGCTTGCTTTTGACAAAGGCTCCAAGGATTTTGTCTTAGTGGCTTTATGTAAAAGTTCTAATAGTTTGCATGTTTATCAATCTCGAAATTTTGGTTGGGTTACTTATTCAACAATGGGATACCCATGGATGATTGTTGACTTTGTTGTTTTGCATAACACTATATATGTTGTCAACGACAAGGGCAACATAGGGATACTCAACTTAAATTATGTGAATATAAAATTTTTAGAAATGAAGAGTATTCCTAGCGTAACTTCTTTGTCGCGCCTAAGGTTGGTTAGTTGTGACGAACAACTTTTTGTGGTTCATACCAAGTCTATGGTGGCATTTAATGTGTACAAGATTGACTTCTCAACCATGAAGTATGTCAAGTTGAAAACTTTGGGTGACATTGCATTATTATATGCTCCGGGTGGAAACTACTATGCCTTGAGCAACCCGAACATGTGGGGTTATGAAAGCAACTCTGTGTATGTTATCGATCATTCGTCTACAAAATGCAAAGTGTATGTAGGGGATGACAACAAGCTGCCAAAGTACATTAGGTCACATGATGATCTTCATACTACAAGACCCTACTGGTTGGACTGGTCTTTTAGACATTTTCACTACGAGATAGATTATTCTCTAGTTGACTAA
Protein sequence

>Msa1224560

MNSSTSDALFDDACAYDHAVKSTCQEKYSEFAEVMSDYRDGRIDPRGVKARVHELFKGHKHLILGINNIMPKNYEIILPPSDEKLNRQDATTFLKQVKVVFQDKMEKYYEFLQVIQDYMNLTIDILDVIKIAMKLFKGHVDLLSGFNYFLPERYGFTFPLLQDHKQGHQLVIKDAFLNEVKAVFHDKLEKYFEFLQVITNHKAQGIDTGGVAAIVKELFKDHTNLILGFNALLPEEHQITLPFELHCHETGKKRMVAGNYQLSWDVLDIISKSLDFDDLFQFACVCKNWRAFHKMYWRDFLALQEPLLVQKSSFFKKSFSFISIPNQQVYRSKMINYFWHFAYSGSSSGYLIMTGNNNSFLLMNPFRRRKKVINAPTFKVNFSYFAYRVLLAFDKGSKDFVLVALCKSSNSLHVYQSRNFGWVTYSTMGYPWMIVDFVVLHNTIYVVNDKGNIGILNLNYVNIKFLEMKSIPSVTSLSRLRLVSCDEQLFVVHTKSMVAFNVYKIDFSTMKYVKLKTLGDIALLYAPGGNYYALSNPNMWGYESNSVYVIDHSSTKCKVYVGDDNKLPKYIRSHDDLHTTRPYWLDWSFRHFHYEIDYSLVD*