AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0746520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0746520 MtrunA17_Chr3g0114101 98.848 434 4 1 1 434 1 433 0.0 895
Msa0746520 MtrunA17_Chr5g0437601 75.115 434 98 4 1 434 4 427 0.0 670
Msa0746520 MtrunA17_Chr4g0005491 51.412 354 166 3 85 433 57 409 2.01e-135 395
Msa0746520 MtrunA17_Chr7g0243301 51.003 349 165 3 89 432 63 410 1.16e-130 383
Msa0746520 MtrunA17_Chr4g0005481 49.608 383 188 3 48 428 64 443 4.24e-130 382
Msa0746520 MtrunA17_Chr3g0113671 51.429 350 162 4 87 431 103 449 8.97e-129 379
Msa0746520 MtrunA17_Chr8g0360521 43.972 423 223 5 11 432 1 410 3.08e-125 369
Msa0746520 MtrunA17_Chr4g0006991 41.452 427 248 2 6 431 2 427 5.07e-123 364
Msa0746520 MtrunA17_Chr5g0437291 48.159 353 172 5 88 432 163 512 4.27e-117 352
Msa0746520 MtrunA17_Chr7g0242701 41.191 403 236 1 29 431 26 427 1.66e-114 342
Msa0746520 MtrunA17_Chr3g0105301 39.437 355 191 7 87 433 40 378 1.06e-83 261
Msa0746520 MtrunA17_Chr1g0175671 38.028 355 196 8 89 432 169 510 2.77e-80 257
Msa0746520 MtrunA17_Chr5g0430371 36.997 373 203 9 77 433 45 401 8.28e-79 249
Msa0746520 MtrunA17_Chr1g0210771 36.827 353 201 8 81 431 50 382 1.20e-77 246
Msa0746520 MtrunA17_Chr4g0041011 35.156 384 222 9 49 431 6 363 2.53e-77 244
Msa0746520 MtrunA17_Chr7g0258851 37.535 357 195 9 89 432 247 588 2.09e-76 249
Msa0746520 MtrunA17_Chr2g0325481 35.714 350 200 8 83 432 43 367 5.31e-75 238
Msa0746520 MtrunA17_Chr3g0085071 37.607 351 191 9 83 431 39 363 1.55e-73 234
Msa0746520 MtrunA17_Chr1g0171171 35.756 344 202 7 88 431 51 375 2.07e-73 234
Msa0746520 MtrunA17_Chr5g0413271 34.473 351 210 8 87 432 142 477 4.31e-73 237
Msa0746520 MtrunA17_Chr3g0085081 36.963 349 186 9 88 431 29 348 7.53e-73 232
Msa0746520 MtrunA17_Chr2g0287901 37.709 358 198 10 84 429 91 435 8.23e-73 236
Msa0746520 MtrunA17_Chr3g0097891 37.026 343 192 7 90 431 31 350 8.54e-73 232
Msa0746520 MtrunA17_Chr4g0071391 36.080 352 205 8 88 431 107 446 2.33e-72 234
Msa0746520 MtrunA17_Chr2g0283581 36.735 343 190 9 90 431 42 358 2.45e-72 231
Msa0746520 MtrunA17_Chr5g0413851 37.283 346 191 8 87 431 39 359 6.04e-72 230
Msa0746520 MtrunA17_Chr4g0045941 34.770 348 203 8 85 432 28 351 8.89e-72 229
Msa0746520 MtrunA17_Chr3g0091031 36.441 354 191 9 83 431 24 348 2.15e-71 229
Msa0746520 MtrunA17_Chr4g0068111 33.333 387 233 9 56 432 83 454 1.33e-70 230
Msa0746520 MtrunA17_Chr7g0269991 36.856 388 200 11 64 431 105 467 1.02e-69 228
Msa0746520 MtrunA17_Chr2g0314801 34.916 358 202 8 76 428 19 350 2.34e-69 223
Msa0746520 MtrunA17_Chr4g0045951 34.770 348 203 7 85 432 40 363 2.70e-69 224
Msa0746520 MtrunA17_Chr1g0213281 35.977 353 207 9 90 433 175 517 2.86e-69 228
Msa0746520 MtrunA17_Chr7g0259711 34.262 359 214 10 85 432 86 433 2.79e-68 224
Msa0746520 MtrunA17_Chr2g0314791 36.056 355 184 11 87 432 26 346 4.83e-67 217
Msa0746520 MtrunA17_Chr8g0368461 31.967 366 214 10 89 432 177 529 3.12e-61 207
Msa0746520 MtrunA17_Chr8g0384151 31.373 357 214 9 84 432 84 417 4.37e-56 191
Msa0746520 MtrunA17_Chr3g0126021 29.101 378 235 9 67 432 104 460 1.53e-52 182
Msa0746520 MtrunA17_Chr1g0209921 36.555 238 133 6 88 320 42 266 1.31e-45 159
Msa0746520 MtrunA17_Chr8g0347321 29.000 400 248 15 51 431 57 439 4.99e-42 154
Msa0746520 MtrunA17_Chr6g0456691 28.941 387 243 12 61 431 49 419 1.07e-40 150
Msa0746520 MtrunA17_Chr6g0456681 30.028 363 219 9 88 431 62 408 1.30e-40 149
Msa0746520 MtrunA17_Chr8g0391481 29.333 375 227 12 75 428 12 369 9.41e-38 141
Msa0746520 MtrunA17_Chr6g0476041 28.212 358 229 14 88 428 165 511 1.13e-37 143
Msa0746520 MtrunA17_Chr2g0283851 30.387 362 206 16 91 427 56 396 1.39e-37 141
Msa0746520 MtrunA17_Chr1g0188191 26.992 389 248 15 64 428 202 578 2.45e-37 143
Msa0746520 MtrunA17_Chr8g0384421 30.789 380 212 17 77 431 119 472 3.95e-37 141
Msa0746520 MtrunA17_Chr6g0451321 26.667 465 271 18 8 431 22 457 9.72e-37 140
Msa0746520 MtrunA17_Chr8g0387921 26.944 360 231 12 86 427 70 415 1.45e-35 135
Msa0746520 MtrunA17_Chr5g0414061 27.660 376 219 15 81 428 85 435 1.74e-35 136
Msa0746520 MtrunA17_Chr5g0414091 29.315 365 219 12 85 427 80 427 4.85e-35 134
Msa0746520 MtrunA17_Chr7g0226991 28.535 389 227 13 66 428 36 399 5.26e-35 134
Msa0746520 MtrunA17_Chr1g0178081 33.852 257 135 7 20 267 10 240 7.54e-34 130
Msa0746520 MtrunA17_Chr1g0178081 35.252 139 79 4 297 432 212 342 7.03e-16 78.6
Msa0746520 MtrunA17_Chr3g0140371 28.649 370 221 14 81 428 9 357 1.08e-33 129
Msa0746520 MtrunA17_Chr5g0414051 26.471 374 217 14 86 428 71 417 3.55e-32 127
Msa0746520 MtrunA17_Chr4g0070341 28.571 392 206 17 76 431 118 471 1.27e-31 125
Msa0746520 MtrunA17_Chr5g0414041 28.378 370 228 15 80 428 77 430 3.83e-31 124
Msa0746520 MtrunA17_Chr6g0455901 25.909 440 268 15 15 431 12 416 2.01e-30 121
Msa0746520 MtrunA17_Chr7g0221271 34.667 150 97 1 68 217 57 205 4.81e-26 104
Msa0746520 MtrunA17_Chr4g0049421 26.536 358 226 12 90 427 48 388 5.04e-26 108
Msa0746520 MtrunA17_Chr7g0221291 45.263 95 51 1 88 182 77 170 3.54e-24 98.6
Msa0746520 MtrunA17_Chr2g0287931 38.168 131 67 5 150 271 1 126 1.16e-16 76.3
Msa0746520 MtrunA17_Chr3g0085101 39.640 111 63 3 283 392 1 108 2.47e-15 72.0
Msa0746520 MtrunA17_Chr7g0221281 24.793 242 155 11 204 431 8 236 7.14e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0746520 AT2G40320.1 70.644 419 112 4 15 433 17 424 0.0 619
Msa0746520 AT3G11030.1 62.252 453 141 5 5 434 6 451 0.0 582
Msa0746520 AT5G01620.2 52.754 345 159 2 85 428 105 446 2.67e-132 389
Msa0746520 AT5G01620.1 52.754 345 159 2 85 428 105 446 2.67e-132 389
Msa0746520 AT5G01620.3 52.754 345 159 2 85 428 113 454 5.29e-132 388
Msa0746520 AT5G01360.2 48.127 347 179 1 86 431 32 378 5.83e-126 370
Msa0746520 AT5G01360.1 45.646 379 203 2 54 431 58 434 1.33e-125 371
Msa0746520 AT3G55990.1 50.000 370 172 5 73 432 118 484 5.26e-125 371
Msa0746520 AT1G73140.1 45.739 352 186 2 82 432 59 406 1.42e-122 362
Msa0746520 AT2G40150.1 50.000 354 163 3 89 431 70 420 7.38e-121 358
Msa0746520 AT2G38320.1 43.455 382 206 4 60 432 25 405 8.06e-119 353
Msa0746520 AT2G40160.1 42.663 368 201 7 74 433 60 425 4.58e-107 323
Msa0746520 AT2G40160.2 42.424 363 193 7 79 427 59 419 1.64e-106 322
Msa0746520 AT2G38320.2 46.130 323 168 3 115 432 1 322 8.36e-106 317
Msa0746520 AT3G12060.1 38.889 360 194 9 85 432 191 536 1.49e-82 264
Msa0746520 AT5G06700.1 37.500 376 213 9 67 432 232 595 8.14e-82 264
Msa0746520 AT1G78710.1 37.047 359 199 9 76 432 24 357 6.14e-81 254
Msa0746520 AT5G20590.1 36.538 364 214 6 76 432 127 480 1.13e-77 249
Msa0746520 AT2G30900.1 36.000 350 199 10 87 433 40 367 1.53e-75 240
Msa0746520 AT2G42570.1 34.865 370 216 8 63 432 21 365 9.61e-75 238
Msa0746520 AT3G62390.1 37.500 376 200 12 73 433 118 473 4.29e-74 240
Msa0746520 AT2G40160.3 42.063 252 136 4 79 320 59 310 6.46e-74 234
Msa0746520 AT1G60790.1 34.726 383 224 10 61 432 166 533 1.04e-73 241
Msa0746520 AT5G58600.1 36.261 353 200 8 90 433 66 402 6.78e-73 234
Msa0746520 AT5G19160.1 38.630 365 190 11 84 429 93 442 1.21e-72 236
Msa0746520 AT3G54260.1 36.950 341 191 8 90 427 51 370 1.34e-72 233
Msa0746520 AT2G30010.1 36.528 386 218 9 62 433 26 398 2.98e-72 233
Msa0746520 AT1G29050.1 34.857 350 204 6 82 431 53 378 4.98e-72 231
Msa0746520 AT3G14850.2 36.522 345 196 7 85 428 29 351 5.09e-72 231
Msa0746520 AT2G30010.2 36.528 386 218 9 62 433 69 441 7.45e-72 233
Msa0746520 AT5G49340.1 34.521 365 221 8 77 432 87 442 1.17e-71 233
Msa0746520 AT3G06080.2 33.488 430 254 12 15 429 31 443 5.78e-71 231
Msa0746520 AT2G34070.1 32.391 389 229 9 43 431 29 383 3.92e-69 224
Msa0746520 AT2G31110.2 35.756 344 195 9 89 431 44 362 1.18e-68 222
Msa0746520 AT5G06230.2 36.413 368 190 11 88 432 19 365 4.12e-67 219
Msa0746520 AT5G06230.1 36.413 368 190 11 88 432 60 406 1.35e-66 218
Msa0746520 AT1G48880.1 33.521 355 201 10 87 432 112 440 1.83e-59 201
Msa0746520 AT3G11570.1 35.417 336 194 8 107 432 98 420 5.60e-59 199
Msa0746520 AT1G78710.2 31.755 359 165 10 76 432 17 297 1.25e-57 192
Msa0746520 AT5G19160.2 39.841 251 136 6 84 324 93 338 3.92e-53 181
Msa0746520 AT2G30900.2 36.555 238 140 6 87 322 40 268 6.64e-50 171
Msa0746520 AT3G06080.1 31.532 333 206 8 5 326 23 344 1.40e-49 172
Msa0746520 AT3G62390.2 36.742 264 149 6 73 324 118 375 1.77e-49 174
Msa0746520 AT5G20590.2 36.508 252 151 3 76 320 127 376 2.79e-49 172
Msa0746520 AT5G58600.2 35.565 239 135 6 90 322 66 291 5.51e-46 161
Msa0746520 AT2G31110.3 34.649 228 138 5 89 315 44 261 5.00e-44 155
Msa0746520 AT1G70230.1 30.387 362 213 13 85 431 74 411 1.08e-43 158
Msa0746520 AT5G06230.3 35.827 254 132 7 88 320 60 303 1.12e-43 155
Msa0746520 AT2G34070.2 31.734 271 163 5 161 431 1 249 3.99e-42 149
Msa0746520 AT3G14850.1 33.829 269 156 6 161 428 1 248 5.83e-42 149
Msa0746520 AT5G15890.1 30.362 359 214 10 85 428 182 519 1.19e-39 149
Msa0746520 AT5G51640.1 27.000 400 245 16 57 428 105 485 2.47e-39 148
Msa0746520 AT1G01430.1 30.084 359 218 11 89 427 98 443 3.19e-39 147
Msa0746520 AT5G64020.1 29.189 370 216 17 90 431 57 408 5.51e-38 142
Msa0746520 AT5G15900.1 28.689 366 214 12 90 431 67 409 2.02e-37 141
Msa0746520 AT5G15900.2 28.689 366 214 12 90 431 86 428 2.42e-37 141
Msa0746520 AT3G28150.1 28.611 360 222 12 87 429 67 408 5.21e-37 140
Msa0746520 AT4G01080.1 29.296 355 217 14 89 427 90 426 6.32e-37 140
Msa0746520 AT5G64470.3 30.141 355 212 14 90 427 55 390 2.96e-36 137
Msa0746520 AT2G37720.1 29.058 382 197 17 86 431 139 482 7.09e-36 138
Msa0746520 AT3G02440.1 27.344 384 245 10 65 431 102 468 1.46e-35 137
Msa0746520 AT3G02440.2 27.344 384 245 10 65 431 110 476 1.78e-35 137
Msa0746520 AT4G25360.1 26.667 375 227 14 82 428 167 521 2.65e-35 137
Msa0746520 AT4G25360.2 26.667 375 227 14 82 428 167 521 2.65e-35 137
Msa0746520 AT4G23790.1 25.850 441 267 20 24 431 14 427 2.76e-34 133
Msa0746520 AT5G64470.2 29.917 361 211 15 90 427 55 396 7.35e-34 131
Msa0746520 AT2G14530.1 27.072 362 227 10 90 431 62 406 1.17e-32 128
Msa0746520 AT2G31110.1 33.333 231 129 8 202 431 8 214 3.49e-32 122
Msa0746520 AT5G20680.6 26.455 378 208 16 88 431 116 457 4.54e-32 127
Msa0746520 AT5G20680.2 26.455 378 208 16 88 431 192 533 1.06e-31 127
Msa0746520 AT5G20680.4 26.455 378 208 16 88 431 210 551 1.43e-31 127
Msa0746520 AT5G20680.1 26.455 378 208 16 88 431 210 551 1.43e-31 127
Msa0746520 AT5G20680.3 26.455 378 208 16 88 431 210 551 1.43e-31 127
Msa0746520 AT5G20680.5 26.455 378 208 16 88 431 210 551 1.43e-31 127
Msa0746520 AT4G11090.1 23.059 438 280 18 19 428 14 422 5.74e-30 120
Msa0746520 AT5G64470.4 28.676 272 170 11 90 347 55 316 1.28e-20 92.4
Msa0746520 AT5G64470.1 28.731 268 167 11 90 343 55 312 6.27e-20 90.5

Find 141 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAAATTGAACAGATTTCT+TGG 0.205060 5_1:-68690640 Msa0746520:three_prime_UTR
TTGCTTGAAGATTTGTAAAT+TGG 0.221284 5_1:-68690609 Msa0746520:three_prime_UTR
TCAATAAGCACGGTCGTTAT+TGG 0.224932 5_1:-68691843 Msa0746520:CDS
ATGTTAGCACCATTTGAATT+TGG 0.236044 5_1:+68690474 None:intergenic
TACAGCGTGGGTTTCAGTTT+TGG 0.238950 5_1:+68695413 None:intergenic
AGTAATAGTAATTAGTGTTT+TGG 0.247005 5_1:-68695605 Msa0746520:five_prime_UTR
ATGCTACAATTGAGTTCTAT+TGG 0.252458 5_1:-68691945 Msa0746520:CDS
AAAAGCATAATGCAAGTAAT+TGG 0.274783 5_1:-68690896 Msa0746520:CDS
ATCAAAGGTTTCCATAGATT+TGG 0.274989 5_1:+68692593 None:intergenic
CAATTGAAGAACCCTCATAT+TGG 0.278107 5_1:-68690934 Msa0746520:CDS
TAGATGTATGTGCGTCTTTA+CGG 0.283956 5_1:+68690810 None:intergenic
ACCTATCTTTGGTGGGTAAC+TGG 0.289892 5_1:-68691793 Msa0746520:CDS
TTCCATAGATTTGGCATGTT+GGG 0.300255 5_1:+68692602 None:intergenic
CGTTCAAGAGGTGGAGAAAA+AGG 0.300949 5_1:-68695358 Msa0746520:CDS
CCAAGAAATCTGTTCAATTT+CGG 0.306267 5_1:+68690640 None:intergenic
AATTGAAGAACCCTCATATT+GGG 0.319038 5_1:-68690933 Msa0746520:CDS
TGGTTAGAAAATGAGCTATA+GGG 0.321477 5_1:-68690548 Msa0746520:three_prime_UTR
TTGGAAAGGCGCAGACATTT+TGG 0.333962 5_1:-68691824 Msa0746520:CDS
TGGTCTTCAACACCTATCTT+TGG 0.335969 5_1:-68691804 Msa0746520:CDS
GTCAACTGTGGTTGTATATA+CGG 0.338046 5_1:+68695237 None:intergenic
TCCCCAACATGCCAAATCTA+TGG 0.346727 5_1:-68692604 Msa0746520:CDS
GGATAAGAGGGTGAAGAGAT+AGG 0.350140 5_1:+68695515 None:intergenic
CACTCAGATTCTTCATATAA+TGG 0.353264 5_1:+68695261 None:intergenic
TACCTGGACTTCAAGATACT+TGG 0.367210 5_1:-68690706 Msa0746520:CDS
CAATATGAGGGTTCTTCAAT+TGG 0.367795 5_1:+68690935 None:intergenic
GTGAACTTAAATCAGTCTCT+TGG 0.368146 5_1:-68690363 Msa0746520:three_prime_UTR
AGTGATGTTGAGAAATGTTA+TGG 0.369289 5_1:+68690847 None:intergenic
ATAGAGTGGGGAGGGGAGCC+AGG 0.374308 5_1:-68690983 Msa0746520:CDS
CCTATGGATGACAGCATTAT+CGG 0.375681 5_1:+68691897 None:intergenic
CGTGAGGCTGCCACCGCAAC+CGG 0.379489 5_1:+68695178 None:intergenic
ATTTGGGCGATATTGAGTTT+TGG 0.379556 5_1:-68690178 Msa0746520:three_prime_UTR
TTGTTGGGGACTCCCTCAAT+CGG 0.391697 5_1:-68692668 Msa0746520:CDS
GAAGAAGACTCTAGTCTTGT+TGG 0.392686 5_1:+68691540 None:intergenic
GGAAGAGGATGATGTTTGTT+GGG 0.394554 5_1:-68692683 Msa0746520:CDS
TTGGTTAGAAAATGAGCTAT+AGG 0.396510 5_1:-68690549 Msa0746520:three_prime_UTR
TGCTACAATTGAGTTCTATT+GGG 0.397733 5_1:-68691944 Msa0746520:CDS
CTATGAAAAGTATGCTTAGA+TGG 0.410597 5_1:-68691582 Msa0746520:CDS
GTTCTGAGAAGAAGAGAAGA+AGG 0.410800 5_1:+68695555 None:intergenic
TGTTGGGGACTCCCTCAATC+GGG 0.418979 5_1:-68692667 Msa0746520:CDS
CACCTCTTGAACGGTGTTGT+TGG 0.423545 5_1:+68695368 None:intergenic
GCTAGTTGCTCTGGAGTCAA+TGG 0.423636 5_1:+68690767 None:intergenic
TCATTGTAGCAGTTCCCTCC+TGG 0.423889 5_1:+68690965 None:intergenic
GAAACATAGTGATACAAGTT+AGG 0.434013 5_1:-68690334 Msa0746520:three_prime_UTR
TGAACTTAAATCAGTCTCTT+GGG 0.434928 5_1:-68690362 Msa0746520:three_prime_UTR
GCAGGGTTAGCTAGTTGCTC+TGG 0.435976 5_1:+68690758 None:intergenic
TGTATACACTGGTGTTTACC+TGG 0.440271 5_1:-68690722 Msa0746520:CDS
TGAAGAGGATGATGGATAAG+AGG 0.445125 5_1:+68695502 None:intergenic
TCAATTTCGGTGTTGTTTCA+AGG 0.447408 5_1:+68690653 None:intergenic
TGAATCAGATCCCCAATATG+AGG 0.448382 5_1:+68690922 None:intergenic
CAATTCTATCAGTTACCCTA+TGG 0.456943 5_1:+68691881 None:intergenic
AACCGGCGGTACTCTTTATC+CGG 0.462447 5_1:+68695195 None:intergenic
GGGAAGAGGATGATGTTTGT+TGG 0.465024 5_1:-68692684 Msa0746520:CDS
ACCAGCATGTCGCCTTCTCA+TGG 0.465345 5_1:-68691517 Msa0746520:CDS
AAGAAGACTCTAGTCTTGTT+GGG 0.468369 5_1:+68691541 None:intergenic
GCAGGAGTATAGAGTGGGGA+GGG 0.469570 5_1:-68690991 Msa0746520:intron
GTTCAGTGGAAGGTGGGTAA+AGG 0.469635 5_1:-68695298 Msa0746520:CDS
TTAAGAATGCCAAATTCAAA+TGG 0.470649 5_1:-68690483 Msa0746520:three_prime_UTR
CCGATAATGCTGTCATCCAT+AGG 0.473397 5_1:-68691897 Msa0746520:CDS
ATGTGCGTCTTTACGGTAGT+TGG 0.473437 5_1:+68690817 None:intergenic
GGGTGGAGTTGTTGGAGATG+TGG 0.476927 5_1:+68695435 None:intergenic
TCTTCAACACCTATCTTTGG+TGG 0.478179 5_1:-68691801 Msa0746520:CDS
AACTGATAGAATTGTAAGAA+AGG 0.479190 5_1:-68691872 Msa0746520:CDS
AAAGAGTGTGATTTGTTCAG+TGG 0.484270 5_1:-68695312 Msa0746520:CDS
AAAACTCAATATCGCCCAAA+TGG 0.486964 5_1:+68690180 None:intergenic
GCCAGTTACCCACCAAAGAT+AGG 0.490344 5_1:+68691792 None:intergenic
TTCTGAGAAGAAGAGAAGAA+GGG 0.490474 5_1:+68695556 None:intergenic
GAGTGGGGAGGGGAGCCAGG+AGG 0.492528 5_1:-68690980 Msa0746520:CDS
GACATACTGACCCCGATTGA+GGG 0.496519 5_1:+68692656 None:intergenic
GAGTTTGATTCAAGAAGAAA+AGG 0.496578 5_1:+68691919 None:intergenic
TGAATTTGGCATTCTTAAAG+TGG 0.497484 5_1:+68690488 None:intergenic
GGTTAGAAAATGAGCTATAG+GGG 0.501876 5_1:-68690547 Msa0746520:three_prime_UTR
AACATACAATATCTTCATGT+TGG 0.508341 5_1:+68691768 None:intergenic
GTGATGTTGAGAAATGTTAT+GGG 0.509971 5_1:+68690848 None:intergenic
AGTGGGGAGGGGAGCCAGGA+GGG 0.515159 5_1:-68690979 Msa0746520:CDS
TCCATAGATTTGGCATGTTG+GGG 0.516832 5_1:+68692603 None:intergenic
TTCCAAGTATCTTGAAGTCC+AGG 0.517028 5_1:+68690704 None:intergenic
TTGAATGAGTTTGCCATGCA+TGG 0.524798 5_1:+68695579 None:intergenic
GGAAGATGAAGAGGAAGTCA+TGG 0.527647 5_1:+68695460 None:intergenic
ATAAAGAGTACCGCCGGTTG+CGG 0.529348 5_1:-68695191 Msa0746520:CDS
ATACAATCAGAGTAGCTAGC+AGG 0.529439 5_1:+68690740 None:intergenic
TTTCCATAGATTTGGCATGT+TGG 0.529665 5_1:+68692601 None:intergenic
TAGAAACACTTCGTGGGAAG+AGG 0.532534 5_1:-68692698 Msa0746520:CDS
ACTGATAGAATTGTAAGAAA+GGG 0.534005 5_1:-68691871 Msa0746520:CDS
CGGTTGCGGTGGCAGCCTCA+CGG 0.534923 5_1:-68695177 Msa0746520:CDS
GTGATTTGTTCAGTGGAAGG+TGG 0.538218 5_1:-68695305 Msa0746520:CDS
GATGTGGACGGAAGATGAAG+AGG 0.540854 5_1:+68695451 None:intergenic
AGACATACTGACCCCGATTG+AGG 0.547149 5_1:+68692655 None:intergenic
GTTTCAAGGATAAAACAACT+TGG 0.548451 5_1:+68690667 None:intergenic
GTCATGGGTGTTGAGGATGA+TGG 0.549061 5_1:+68695476 None:intergenic
CATGTTGGGGAATGAGATGA+TGG 0.552042 5_1:+68692616 None:intergenic
CGATAATGCTGTCATCCATA+GGG 0.552611 5_1:-68691896 Msa0746520:CDS
GGCGGTACTCTTTATCCGGC+CGG 0.553038 5_1:+68695199 None:intergenic
GGGTAAAGGATGAGTTAACT+AGG 0.555433 5_1:-68695284 Msa0746520:CDS
TCCATGAGAAGGCGACATGC+TGG 0.560559 5_1:+68691516 None:intergenic
GAAGAGGATGATGGATAAGA+GGG 0.563005 5_1:+68695503 None:intergenic
TGATTTGTTCAGTGGAAGGT+GGG 0.568942 5_1:-68695304 Msa0746520:CDS
TGACTTGTCAAGAACATGGC+CGG 0.570301 5_1:-68695218 Msa0746520:CDS
GGCCGGATAAAGAGTACCGC+CGG 0.570651 5_1:-68695197 Msa0746520:CDS
GAAGACAGTGAGAGAATCAA+AGG 0.572213 5_1:+68692578 None:intergenic
GGCAGGAGTATAGAGTGGGG+AGG 0.573799 5_1:-68690992 Msa0746520:intron
TTGTCAAGAACATGGCCGGC+CGG 0.576259 5_1:-68695214 Msa0746520:CDS
AAGAGTACCGCCGGTTGCGG+TGG 0.579098 5_1:-68695188 Msa0746520:CDS
CTTCAACACCTATCTTTGGT+GGG 0.579952 5_1:-68691800 Msa0746520:CDS
GGAGTTGTTGGAGATGTGGA+CGG 0.584005 5_1:+68695439 None:intergenic
GATGGCGGTGAAGAGGATGA+TGG 0.584689 5_1:+68695494 None:intergenic
TACAATCAGAGTAGCTAGCA+GGG 0.585561 5_1:+68690741 None:intergenic
TATACTCACTTTCCATGAGA+AGG 0.587719 5_1:+68691505 None:intergenic
TGAGGATGATGGCGGTGAAG+AGG 0.590325 5_1:+68695487 None:intergenic
AGAGGAAGTCATGGGTGTTG+AGG 0.594059 5_1:+68695469 None:intergenic
GTCCAACAACACCGTTCAAG+AGG 0.598897 5_1:-68695370 Msa0746520:CDS
GAAGAGGATGATGTTTGTTG+GGG 0.599533 5_1:-68692682 Msa0746520:CDS
CAACAACACCGTTCAAGAGG+TGG 0.599644 5_1:-68695367 Msa0746520:CDS
TAATGCTAGAAACACTTCGT+GGG 0.605384 5_1:-68692704 Msa0746520:CDS
TTAATGCTAGAAACACTTCG+TGG 0.607752 5_1:-68692705 Msa0746520:CDS
CAGGAGTATAGAGTGGGGAG+GGG 0.610116 5_1:-68690990 Msa0746520:CDS
AAGCACGGTCGTTATTGGAA+AGG 0.611241 5_1:-68691838 Msa0746520:CDS
GAAGATGAAGAGGAAGTCAT+GGG 0.615378 5_1:+68695461 None:intergenic
CAGTTGACTTGTCAAGAACA+TGG 0.615431 5_1:-68695222 Msa0746520:CDS
TATGAAAAGTATGCTTAGAT+GGG 0.615716 5_1:-68691581 Msa0746520:CDS
ATTGAAGAACCCTCATATTG+GGG 0.618106 5_1:-68690932 Msa0746520:CDS
GTTGGGGACTCCCTCAATCG+GGG 0.618765 5_1:-68692666 Msa0746520:CDS
GAGGCTGCCACCGCAACCGG+CGG 0.622452 5_1:+68695181 None:intergenic
GAATCAGATCCCCAATATGA+GGG 0.624581 5_1:+68690923 None:intergenic
AACAGAGGAAGCCTATCGCA+TGG 0.627890 5_1:-68691605 Msa0746520:CDS
CGTTGAAAAGAGTACAGCGT+GGG 0.628789 5_1:+68695401 None:intergenic
AATTGGAAGATAAAGCATGT+GGG 0.631563 5_1:-68690592 Msa0746520:three_prime_UTR
GGGGAATGAGATGATGGAGA+AGG 0.634101 5_1:+68692622 None:intergenic
AGTGTGATTTGTTCAGTGGA+AGG 0.637166 5_1:-68695308 Msa0746520:CDS
AAATTGGAAGATAAAGCATG+TGG 0.637731 5_1:-68690593 Msa0746520:three_prime_UTR
TTTGGCAGGAGTATAGAGTG+GGG 0.639163 5_1:-68690995 Msa0746520:intron
GATTGTTGAGATGCAAACAG+AGG 0.642193 5_1:-68691620 Msa0746520:CDS
TAGATGGGTGAAAATGAACA+TGG 0.646778 5_1:-68691566 Msa0746520:CDS
TCTCACTGTCTTCACAGCCA+AGG 0.647375 5_1:-68692568 Msa0746520:intron
AAGGGTTCAATCAATAAGCA+CGG 0.650432 5_1:-68691853 Msa0746520:CDS
GCTACTCTGATTGTATACAC+TGG 0.654776 5_1:-68690733 Msa0746520:CDS
TTGGGAAGATCGCAGCCGTG+AGG 0.692886 5_1:+68695162 None:intergenic
TGTTCTTGACAAGTCAACTG+TGG 0.713133 5_1:+68695225 None:intergenic
AAGAGATAGGAAGAAAGACG+AGG 0.721315 5_1:+68695528 None:intergenic
ATGGGTGTTGAGGATGATGG+CGG 0.751697 5_1:+68695479 None:intergenic
CCGTTGAAAAGAGTACAGCG+TGG 0.757204 5_1:+68695400 None:intergenic
ATGGTGCTAACATATGTACG+CGG 0.792749 5_1:-68690464 Msa0746520:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAAAAAAAATACAA+CGG - chr5_1:68691747-68691766 Msa0746520:intron 10.0%
!!! GTTTTGATATTTATTTTTTT+TGG + chr5_1:68692318-68692337 None:intergenic 10.0%
!!! ATTTTGTAATAGTAGTTTAA+TGG - chr5_1:68690938-68690957 Msa0746520:CDS 15.0%
!!! ATAAATCTCGAATTTTTTAA+AGG + chr5_1:68691079-68691098 None:intergenic 15.0%
!!! TTGATAAATTTTGTTTTGTT+TGG + chr5_1:68691230-68691249 None:intergenic 15.0%
!!! TATTGTGCTATTATATTTTT+CGG + chr5_1:68692340-68692359 None:intergenic 15.0%
!! TCATATTGTTGTATTTAATT+AGG - chr5_1:68693881-68693900 Msa0746520:intron 15.0%
!! AAACAATTTATTGAATATAG+TGG + chr5_1:68694119-68694138 None:intergenic 15.0%
!!! TGTTTTATAATTGAAAAATC+TGG + chr5_1:68694482-68694501 None:intergenic 15.0%
!! CAAGAATTATTCTTAAATAT+TGG + chr5_1:68694554-68694573 None:intergenic 15.0%
!!! TTAAAATGTTTTATTGTTCT+CGG + chr5_1:68694692-68694711 None:intergenic 15.0%
!!! ATTAAAGTACTATGTTATTT+TGG - chr5_1:68694842-68694861 Msa0746520:intron 15.0%
!!! AGTAATAGTAATTAGTGTTT+TGG - chr5_1:68690250-68690269 Msa0746520:three_prime_UTR 20.0%
!!! GTAATAGTAATTAGTGTTTT+GGG - chr5_1:68690251-68690270 Msa0746520:three_prime_UTR 20.0%
!!! TAATAGTAATTAGTGTTTTG+GGG - chr5_1:68690252-68690271 Msa0746520:three_prime_UTR 20.0%
!!! TAGTACTATAGTTTTATACA+AGG - chr5_1:68690985-68691004 Msa0746520:CDS 20.0%
!!! ATAGAAATGTTTACAAGTTT+TGG - chr5_1:68691267-68691286 Msa0746520:intron 20.0%
!!! ATTAATAATGCCACTAATTT+TGG - chr5_1:68691401-68691420 Msa0746520:intron 20.0%
!! TCAAAAAATAAGAATGAACT+GGG + chr5_1:68691551-68691570 None:intergenic 20.0%
!!! TCAAATATTTTTATCCTGTA+TGG - chr5_1:68691594-68691613 Msa0746520:CDS 20.0%
!!! ACTAGAATAAAGACTTATTT+TGG + chr5_1:68691693-68691712 None:intergenic 20.0%
!! TACAATGAAGAATCATAAAT+TGG - chr5_1:68692150-68692169 Msa0746520:intron 20.0%
!!! ATAAATTGGAATTCTAGTTA+AGG - chr5_1:68692164-68692183 Msa0746520:intron 20.0%
!!! TGTAGTATCAATTTTCTTTA+TGG - chr5_1:68692704-68692723 Msa0746520:CDS 20.0%
!!! AACTAACGTACAATTTTTTT+TGG + chr5_1:68692922-68692941 None:intergenic 20.0%
!!! TGCTAATTTTGTATTTTTGT+TGG - chr5_1:68692975-68692994 Msa0746520:intron 20.0%
!!! CTAGATATTTTGAAAACTAA+GGG - chr5_1:68693751-68693770 Msa0746520:intron 20.0%
!!! TAGATATTTTGAAAACTAAG+GGG - chr5_1:68693752-68693771 Msa0746520:intron 20.0%
!!! TTTTGTTTCATTTACCATTT+TGG + chr5_1:68693807-68693826 None:intergenic 20.0%
!! AAGAAAAAGAAAGAAAGAAA+AGG + chr5_1:68693854-68693873 None:intergenic 20.0%
!!! TTTATTGAATATAGTGGATT+AGG + chr5_1:68694113-68694132 None:intergenic 20.0%
!! ATTTGAGTAGACATTAATTA+GGG + chr5_1:68694179-68694198 None:intergenic 20.0%
!! AATTTGAGTAGACATTAATT+AGG + chr5_1:68694180-68694199 None:intergenic 20.0%
!! TATACTATAATTCACAAACT+CGG - chr5_1:68694369-68694388 Msa0746520:intron 20.0%
!! TAGAAAATTGTGATATTGTA+TGG + chr5_1:68694592-68694611 None:intergenic 20.0%
!!! TAAAATGTTTTATTGTTCTC+GGG + chr5_1:68694691-68694710 None:intergenic 20.0%
!! AAATTGTTGTAAACAAGATT+CGG + chr5_1:68694741-68694760 None:intergenic 20.0%
!!! TTCTTTTTTCTTTGTTAAGA+AGG - chr5_1:68695549-68695568 Msa0746520:CDS 20.0%
!!! TCTTTTTTCTTTGTTAAGAA+GGG - chr5_1:68695550-68695569 Msa0746520:CDS 20.0%
! GAAGTGAAAAAACATTCAAT+AGG - chr5_1:68690841-68690860 Msa0746520:CDS 25.0%
! TTATACAAGGAGCAAAATAT+TGG - chr5_1:68690998-68691017 Msa0746520:intron 25.0%
! TAACAACATTTGATATGTGT+AGG - chr5_1:68691168-68691187 Msa0746520:intron 25.0%
!!! ATAAGCGACTTTGTTTTTTT+AGG - chr5_1:68691316-68691335 Msa0746520:intron 25.0%
! GTCAAAAAATAAGAATGAAC+TGG + chr5_1:68691552-68691571 None:intergenic 25.0%
! TAATGTAGATGTTTATGACT+TGG - chr5_1:68691712-68691731 Msa0746520:intron 25.0%
! AATGTAGATGTTTATGACTT+GGG - chr5_1:68691713-68691732 Msa0746520:intron 25.0%
!! AGAGTCAGAAATTTAGTTTA+GGG - chr5_1:68691800-68691819 Msa0746520:CDS 25.0%
!! TAAGACTCTTCTTTCTTTTT+CGG - chr5_1:68692189-68692208 Msa0746520:intron 25.0%
!! CCTTAAACAACTAAGTTTTT+AGG + chr5_1:68692251-68692270 None:intergenic 25.0%
! CCTAAAAACTTAGTTGTTTA+AGG - chr5_1:68692248-68692267 Msa0746520:intron 25.0%
! TAGCCAATTCTTGTAATAAT+AGG - chr5_1:68692744-68692763 Msa0746520:intron 25.0%
! CTTCCTATTATTACAAGAAT+TGG + chr5_1:68692750-68692769 None:intergenic 25.0%
! CTTGTAATAATAGGAAGAAT+TGG - chr5_1:68692753-68692772 Msa0746520:intron 25.0%
!! TTTCTAGAAGTATAACTTCA+AGG + chr5_1:68692954-68692973 None:intergenic 25.0%
! GAAATTCAAAATCCTAATTC+AGG + chr5_1:68693049-68693068 None:intergenic 25.0%
!! AGGATTTTGAATTTCTTCAA+AGG - chr5_1:68693054-68693073 Msa0746520:intron 25.0%
! ATATATTGCACATAAGCTAT+GGG + chr5_1:68693330-68693349 None:intergenic 25.0%
! AATATATTGCACATAAGCTA+TGG + chr5_1:68693331-68693350 None:intergenic 25.0%
!!! TTTTGCTTTATTCACGATTT+TGG - chr5_1:68693373-68693392 Msa0746520:intron 25.0%
! AACCTCAAAATGTATAAATG+GGG + chr5_1:68693457-68693476 None:intergenic 25.0%
! CAACCTCAAAATGTATAAAT+GGG + chr5_1:68693458-68693477 None:intergenic 25.0%
! TCAACCTCAAAATGTATAAA+TGG + chr5_1:68693459-68693478 None:intergenic 25.0%
!!! AAAAACACGTAAATTTGTTG+TGG - chr5_1:68693603-68693622 Msa0746520:intron 25.0%
!!! GCTAGATATTTTGAAAACTA+AGG - chr5_1:68693750-68693769 Msa0746520:intron 25.0%
! AACTGATAGAATTGTAAGAA+AGG - chr5_1:68693983-68694002 Msa0746520:intron 25.0%
! ACTGATAGAATTGTAAGAAA+GGG - chr5_1:68693984-68694003 Msa0746520:intron 25.0%
! AACATACAATATCTTCATGT+TGG + chr5_1:68694090-68694109 None:intergenic 25.0%
! TTTGAGTAGACATTAATTAG+GGG + chr5_1:68694178-68694197 None:intergenic 25.0%
!! TAATGTCTACTCAAATTTTC+AGG - chr5_1:68694183-68694202 Msa0746520:intron 25.0%
!! TATGAAAAGTATGCTTAGAT+GGG - chr5_1:68694274-68694293 Msa0746520:intron 25.0%
!!! ATATTTTTAATGCGTGAAAG+CGG + chr5_1:68694417-68694436 None:intergenic 25.0%
!! CCGTTTTATCTTTAATCAAA+CGG + chr5_1:68694446-68694465 None:intergenic 25.0%
! CCGTTTGATTAAAGATAAAA+CGG - chr5_1:68694443-68694462 Msa0746520:intron 25.0%
!!! AGTTAAAATCTGCAGTTTTT+TGG - chr5_1:68694502-68694521 Msa0746520:intron 25.0%
!!! GTTAAAATCTGCAGTTTTTT+GGG - chr5_1:68694503-68694522 Msa0746520:intron 25.0%
!!! AAAATGTTTTATTGTTCTCG+GGG + chr5_1:68694690-68694709 None:intergenic 25.0%
! AATTGTTGTAAACAAGATTC+GGG + chr5_1:68694740-68694759 None:intergenic 25.0%
! AACAATAAGTATGATGCAAT+TGG + chr5_1:68694821-68694840 None:intergenic 25.0%
!! AAAAGCATAATGCAAGTAAT+TGG - chr5_1:68694959-68694978 Msa0746520:intron 25.0%
! TTGCTTGAAGATTTGTAAAT+TGG - chr5_1:68695246-68695265 Msa0746520:CDS 25.0%
! TTAAGAATGCCAAATTCAAA+TGG - chr5_1:68695372-68695391 Msa0746520:CDS 25.0%
CACTCAGATTCTTCATATAA+TGG + chr5_1:68690597-68690616 None:intergenic 30.0%
AAACATAAGCACACTTACTT+GGG + chr5_1:68690714-68690733 None:intergenic 30.0%
AAAACATAAGCACACTTACT+TGG + chr5_1:68690715-68690734 None:intergenic 30.0%
!!! TTTTTTACGGGTCAAGTTAA+CGG - chr5_1:68690762-68690781 Msa0746520:CDS 30.0%
!!! TCCAACGTTTTTTTGAATGT+CGG + chr5_1:68690821-68690840 None:intergenic 30.0%
TTTACACCGACAATATTGTA+CGG + chr5_1:68690964-68690983 None:intergenic 30.0%
GATATTGTTATGTTAGAACC+TGG - chr5_1:68691123-68691142 Msa0746520:intron 30.0%
!! TTTACAAGTTTTGGCAAACA+AGG - chr5_1:68691276-68691295 Msa0746520:intron 30.0%
!! GACATTTTATCTGTTTCTTC+TGG - chr5_1:68691338-68691357 Msa0746520:intron 30.0%
! TTTATCTGTTTCTTCTGGAA+TGG - chr5_1:68691343-68691362 Msa0746520:intron 30.0%
!! TTATCTGTTTCTTCTGGAAT+GGG - chr5_1:68691344-68691363 Msa0746520:intron 30.0%
GGACCTTACATGAATTAATA+CGG - chr5_1:68691365-68691384 Msa0746520:intron 30.0%
TGTCCGTATTAATTCATGTA+AGG + chr5_1:68691371-68691390 None:intergenic 30.0%
CTAAATTAGTCCACCTAAAT+TGG - chr5_1:68691475-68691494 Msa0746520:intron 30.0%
! CAGAGTCAGAAATTTAGTTT+AGG - chr5_1:68691799-68691818 Msa0746520:CDS 30.0%
! GAGTCAGAAATTTAGTTTAG+GGG - chr5_1:68691801-68691820 Msa0746520:CDS 30.0%
! AGTCAGAAATTTAGTTTAGG+GGG - chr5_1:68691802-68691821 Msa0746520:CDS 30.0%
AACAATGAAAATGCAAACGT+AGG - chr5_1:68692038-68692057 Msa0746520:intron 30.0%
AATCGCAATAAGTGAATCAT+TGG - chr5_1:68692068-68692087 Msa0746520:intron 30.0%
AATAAGTGAATCATTGGTAG+TGG - chr5_1:68692074-68692093 Msa0746520:intron 30.0%
!!! TTTTTTCCTCAAAAGTTCTG+AGG - chr5_1:68692367-68692386 Msa0746520:intron 30.0%
!! TTTTTCCTCAAAAGTTCTGA+GGG - chr5_1:68692368-68692387 Msa0746520:intron 30.0%
CAAATGTTAATCCTCAAACT+TGG + chr5_1:68692429-68692448 None:intergenic 30.0%
! AATGACCACTATTTTCTTGA+TGG - chr5_1:68692460-68692479 Msa0746520:intron 30.0%
ACTTTCTACTACTAGTTGAT+TGG + chr5_1:68692628-68692647 None:intergenic 30.0%
CTTGAAAATAAAATTTCCCG+TGG + chr5_1:68692673-68692692 None:intergenic 30.0%
ATCAAAGGTTTCCATAGATT+TGG + chr5_1:68693265-68693284 None:intergenic 30.0%
! TTCCCCATTTATACATTTTG+AGG - chr5_1:68693452-68693471 Msa0746520:intron 30.0%
GTTGTGGAACATTATTTACA+TGG - chr5_1:68693619-68693638 Msa0746520:intron 30.0%
! TTATGTGACAACTAAGTTGA+TGG + chr5_1:68693671-68693690 None:intergenic 30.0%
!!! GGTTGATTTTTTGCATGATT+TGG + chr5_1:68693706-68693725 None:intergenic 30.0%
AAAATCAACCCAAAATGCAT+AGG - chr5_1:68693716-68693735 Msa0746520:intron 30.0%
! CATTTTTAAATCCGCAGATT+TGG + chr5_1:68693778-68693797 None:intergenic 30.0%
CAAATCTGCGGATTTAAAAA+TGG - chr5_1:68693776-68693795 Msa0746520:intron 30.0%
TAAAAATGGAGAGACCAAAA+TGG - chr5_1:68693790-68693809 Msa0746520:intron 30.0%
AAGAAAAGGATTGACAGATT+TGG + chr5_1:68693840-68693859 None:intergenic 30.0%
ATGCTACAATTGAGTTCTAT+TGG - chr5_1:68693910-68693929 Msa0746520:intron 30.0%
TGCTACAATTGAGTTCTATT+GGG - chr5_1:68693911-68693930 Msa0746520:intron 30.0%
GAGTTTGATTCAAGAAGAAA+AGG + chr5_1:68693939-68693958 None:intergenic 30.0%
! CTATGAAAAGTATGCTTAGA+TGG - chr5_1:68694273-68694292 Msa0746520:intron 30.0%
!! TATTTTTAATGCGTGAAAGC+GGG + chr5_1:68694416-68694435 None:intergenic 30.0%
TCACGCATTAAAAATATCTG+TGG - chr5_1:68694420-68694439 Msa0746520:intron 30.0%
! ACAATTTTCTACGCTACAAA+TGG - chr5_1:68694601-68694620 Msa0746520:intron 30.0%
!!! AAGTACTATGTTATTTTGGC+AGG - chr5_1:68694846-68694865 Msa0746520:intron 30.0%
AATTGAAGAACCCTCATATT+GGG - chr5_1:68694922-68694941 Msa0746520:intron 30.0%
GTGATGTTGAGAAATGTTAT+GGG + chr5_1:68695010-68695029 None:intergenic 30.0%
AGTGATGTTGAGAAATGTTA+TGG + chr5_1:68695011-68695030 None:intergenic 30.0%
CATCTATCTACAAAAAGCAA+TGG - chr5_1:68695062-68695081 Msa0746520:intron 30.0%
GTTTCAAGGATAAAACAACT+TGG + chr5_1:68695191-68695210 None:intergenic 30.0%
CCAAGAAATCTGTTCAATTT+CGG + chr5_1:68695218-68695237 None:intergenic 30.0%
AAATTGGAAGATAAAGCATG+TGG - chr5_1:68695262-68695281 Msa0746520:CDS 30.0%
AATTGGAAGATAAAGCATGT+GGG - chr5_1:68695263-68695282 Msa0746520:CDS 30.0%
TTGGTTAGAAAATGAGCTAT+AGG - chr5_1:68695306-68695325 Msa0746520:CDS 30.0%
TGGTTAGAAAATGAGCTATA+GGG - chr5_1:68695307-68695326 Msa0746520:CDS 30.0%
! GGGGTTTTACATGAAAAAAT+TGG - chr5_1:68695327-68695346 Msa0746520:CDS 30.0%
TGAATTTGGCATTCTTAAAG+TGG + chr5_1:68695370-68695389 None:intergenic 30.0%
ATGTTAGCACCATTTGAATT+TGG + chr5_1:68695384-68695403 None:intergenic 30.0%
TGAACTTAAATCAGTCTCTT+GGG - chr5_1:68695493-68695512 Msa0746520:CDS 30.0%
GAAACATAGTGATACAAGTT+AGG - chr5_1:68695521-68695540 Msa0746520:CDS 30.0%
! TTGTTGTTGTTGTTGTTCAA+AGG - chr5_1:68695589-68695608 Msa0746520:exon 30.0%
! TTCTGAGAAGAAGAGAAGAA+GGG + chr5_1:68690302-68690321 None:intergenic 35.0%
!! AAAGAGTGTGATTTGTTCAG+TGG - chr5_1:68690543-68690562 Msa0746520:three_prime_UTR 35.0%
GTCAACTGTGGTTGTATATA+CGG + chr5_1:68690621-68690640 None:intergenic 35.0%
! CTTTCTTTTTGTATACGTGC+TGG - chr5_1:68690739-68690758 Msa0746520:CDS 35.0%
!!! GTATACGTGCTGGTTTTTTA+CGG - chr5_1:68690749-68690768 Msa0746520:CDS 35.0%
!!! TATACGTGCTGGTTTTTTAC+GGG - chr5_1:68690750-68690769 Msa0746520:CDS 35.0%
ACCGACATTCAAAAAAACGT+TGG - chr5_1:68690817-68690836 Msa0746520:CDS 35.0%
TAATGGCCGTACAATATTGT+CGG - chr5_1:68690955-68690974 Msa0746520:CDS 35.0%
TTGTGATATCTGTCTGCAAA+AGG - chr5_1:68691098-68691117 Msa0746520:intron 35.0%
TTATGAGGGACCAAAATTAG+TGG + chr5_1:68691414-68691433 None:intergenic 35.0%
GTGTCGCAATCAAATTATGA+GGG + chr5_1:68691428-68691447 None:intergenic 35.0%
TGTGTCGCAATCAAATTATG+AGG + chr5_1:68691429-68691448 None:intergenic 35.0%
!!! GACTTATTTTGGTGTGTTCA+CGG + chr5_1:68691682-68691701 None:intergenic 35.0%
AATGAAAATGCAAACGTAGG+AGG - chr5_1:68692041-68692060 Msa0746520:intron 35.0%
!! GGTGGTAACGATTTTTGTTA+AGG - chr5_1:68692210-68692229 Msa0746520:intron 35.0%
TGTTAATCCTCAAACTTGGA+CGG + chr5_1:68692425-68692444 None:intergenic 35.0%
GTCAACCATCAAGAAAATAG+TGG + chr5_1:68692468-68692487 None:intergenic 35.0%
! TGCACTGTCTTTTTACCATA+TGG - chr5_1:68692549-68692568 Msa0746520:intron 35.0%
! GCACTGTCTTTTTACCATAT+GGG - chr5_1:68692550-68692569 Msa0746520:intron 35.0%
! CACTGTCTTTTTACCATATG+GGG - chr5_1:68692551-68692570 Msa0746520:intron 35.0%
AGAGATCCAATGAAAAACCA+CGG - chr5_1:68692653-68692672 Msa0746520:CDS 35.0%
! AATTTCCCGTGGTTTTTCAT+TGG + chr5_1:68692662-68692681 None:intergenic 35.0%
! ACATTTTTGTCCGTTGAGAT+AGG + chr5_1:68692873-68692892 None:intergenic 35.0%
TTAATGCTAGAAACACTTCG+TGG - chr5_1:68693150-68693169 Msa0746520:intron 35.0%
TAATGCTAGAAACACTTCGT+GGG - chr5_1:68693151-68693170 Msa0746520:intron 35.0%
TTCCATAGATTTGGCATGTT+GGG + chr5_1:68693256-68693275 None:intergenic 35.0%
TTTCCATAGATTTGGCATGT+TGG + chr5_1:68693257-68693276 None:intergenic 35.0%
ATTCCGCGATTATAGTAACT+CGG - chr5_1:68693410-68693429 Msa0746520:intron 35.0%
AAACCGAGTTACTATAATCG+CGG + chr5_1:68693416-68693435 None:intergenic 35.0%
ATGATGTGAAACTGTCTAAG+TGG - chr5_1:68693525-68693544 Msa0746520:intron 35.0%
TGATGTGAAACTGTCTAAGT+GGG - chr5_1:68693526-68693545 Msa0746520:intron 35.0%
CAATTCTATCAGTTACCCTA+TGG + chr5_1:68693977-68693996 None:intergenic 35.0%
AAGGGTTCAATCAATAAGCA+CGG - chr5_1:68694002-68694021 Msa0746520:intron 35.0%
ATTAGGGGCTAATTATGCAA+CGG + chr5_1:68694163-68694182 None:intergenic 35.0%
!! TCTACTCAAATTTTCAGGCT+TGG - chr5_1:68694188-68694207 Msa0746520:intron 35.0%
!! TTTCAGGCTTGGTTCTTTTA+AGG - chr5_1:68694199-68694218 Msa0746520:intron 35.0%
TAGATGGGTGAAAATGAACA+TGG - chr5_1:68694289-68694308 Msa0746520:intron 35.0%
!! AAGAAGACTCTAGTCTTGTT+GGG + chr5_1:68694317-68694336 None:intergenic 35.0%
TATACTCACTTTCCATGAGA+AGG + chr5_1:68694353-68694372 None:intergenic 35.0%
! ATTTTTAATGCGTGAAAGCG+GGG + chr5_1:68694415-68694434 None:intergenic 35.0%
! GCTACAAATGGTTTAAGACT+CGG - chr5_1:68694613-68694632 Msa0746520:intron 35.0%
CAATATGAGGGTTCTTCAAT+TGG + chr5_1:68694923-68694942 None:intergenic 35.0%
CAATTGAAGAACCCTCATAT+TGG - chr5_1:68694921-68694940 Msa0746520:intron 35.0%
ATTGAAGAACCCTCATATTG+GGG - chr5_1:68694923-68694942 Msa0746520:intron 35.0%
TAGATGTATGTGCGTCTTTA+CGG + chr5_1:68695048-68695067 None:intergenic 35.0%
!! TCAATTTCGGTGTTGTTTCA+AGG + chr5_1:68695205-68695224 None:intergenic 35.0%
CCGAAATTGAACAGATTTCT+TGG - chr5_1:68695215-68695234 Msa0746520:CDS 35.0%
GGTTAGAAAATGAGCTATAG+GGG - chr5_1:68695308-68695327 Msa0746520:CDS 35.0%
GTGAACTTAAATCAGTCTCT+TGG - chr5_1:68695492-68695511 Msa0746520:CDS 35.0%
GTGAAACTCAATTGTGACTT+TGG - chr5_1:68695628-68695647 Msa0746520:five_prime_UTR 35.0%
AAAACTCAATATCGCCCAAA+TGG + chr5_1:68695678-68695697 None:intergenic 35.0%
TTGAATGAGTTTGCCATGCA+TGG + chr5_1:68690279-68690298 None:intergenic 40.0%
!! GTTCTGAGAAGAAGAGAAGA+AGG + chr5_1:68690303-68690322 None:intergenic 40.0%
AAGAGATAGGAAGAAAGACG+AGG + chr5_1:68690330-68690349 None:intergenic 40.0%
!! GAAGAGGATGATGGATAAGA+GGG + chr5_1:68690355-68690374 None:intergenic 40.0%
!! TGAAGAGGATGATGGATAAG+AGG + chr5_1:68690356-68690375 None:intergenic 40.0%
GAAGATGAAGAGGAAGTCAT+GGG + chr5_1:68690397-68690416 None:intergenic 40.0%
! CTTTTTCTCCACCTCTTGAA+CGG + chr5_1:68690499-68690518 None:intergenic 40.0%
!! AGTGTGATTTGTTCAGTGGA+AGG - chr5_1:68690547-68690566 Msa0746520:three_prime_UTR 40.0%
!! TGATTTGTTCAGTGGAAGGT+GGG - chr5_1:68690551-68690570 Msa0746520:three_prime_UTR 40.0%
GGGTAAAGGATGAGTTAACT+AGG - chr5_1:68690571-68690590 Msa0746520:three_prime_UTR 40.0%
TGTTCTTGACAAGTCAACTG+TGG + chr5_1:68690633-68690652 None:intergenic 40.0%
!! CAGTTGACTTGTCAAGAACA+TGG - chr5_1:68690633-68690652 Msa0746520:three_prime_UTR 40.0%
TCGATTTCACAATTCCAGCA+AGG - chr5_1:68691199-68691218 Msa0746520:intron 40.0%
! TTTGTTTGGTGAAACCTTGC+TGG + chr5_1:68691216-68691235 None:intergenic 40.0%
!! ACAAGTTTTGGCAAACAAGG+CGG - chr5_1:68691279-68691298 Msa0746520:intron 40.0%
ATTCTTCCTAGCGCCAATTT+AGG + chr5_1:68691491-68691510 None:intergenic 40.0%
ATAAGAATGAACTGGGACCT+GGG + chr5_1:68691544-68691563 None:intergenic 40.0%
AATAAGAATGAACTGGGACC+TGG + chr5_1:68691545-68691564 None:intergenic 40.0%
AGTTCGTGACATTTCCATAC+AGG + chr5_1:68691611-68691630 None:intergenic 40.0%
!!! GACTCTTCTTTCTTTTTCGG+TGG - chr5_1:68692192-68692211 Msa0746520:intron 40.0%
! TTCTTGATGGTTGACACTTC+TGG - chr5_1:68692473-68692492 Msa0746520:intron 40.0%
TGGTAAAAAGACAGTGCATG+TGG + chr5_1:68692547-68692566 None:intergenic 40.0%
!! TTCTAGCTGTGTCTTTTTGC+AGG + chr5_1:68692596-68692615 None:intergenic 40.0%
GAGATCCAATGAAAAACCAC+GGG - chr5_1:68692654-68692673 Msa0746520:CDS 40.0%
TAATTCAGGTGAGTGCATTC+AGG + chr5_1:68693035-68693054 None:intergenic 40.0%
TGAATGCACTCACCTGAATT+AGG - chr5_1:68693034-68693053 Msa0746520:intron 40.0%
TCGCATTGAATCTGTAGCAT+TGG + chr5_1:68693128-68693147 None:intergenic 40.0%
GGAAGAGGATGATGTTTGTT+GGG - chr5_1:68693172-68693191 Msa0746520:intron 40.0%
! GAAGAGGATGATGTTTGTTG+GGG - chr5_1:68693173-68693192 Msa0746520:intron 40.0%
TCCATAGATTTGGCATGTTG+GGG + chr5_1:68693255-68693274 None:intergenic 40.0%
GAAGACAGTGAGAGAATCAA+AGG + chr5_1:68693280-68693299 None:intergenic 40.0%
ATCAACCCAAAATGCATAGG+TGG - chr5_1:68693719-68693738 Msa0746520:intron 40.0%
TCAACCCAAAATGCATAGGT+GGG - chr5_1:68693720-68693739 Msa0746520:intron 40.0%
CCTATGGATGACAGCATTAT+CGG + chr5_1:68693961-68693980 None:intergenic 40.0%
CGATAATGCTGTCATCCATA+GGG - chr5_1:68693959-68693978 Msa0746520:intron 40.0%
TCAATAAGCACGGTCGTTAT+TGG - chr5_1:68694012-68694031 Msa0746520:intron 40.0%
TGGTCTTCAACACCTATCTT+TGG - chr5_1:68694051-68694070 Msa0746520:intron 40.0%
TCTTCAACACCTATCTTTGG+TGG - chr5_1:68694054-68694073 Msa0746520:intron 40.0%
CTTCAACACCTATCTTTGGT+GGG - chr5_1:68694055-68694074 Msa0746520:intron 40.0%
GATTGTTGAGATGCAAACAG+AGG - chr5_1:68694235-68694254 Msa0746520:intron 40.0%
! ACTTTTCATAGCCATGCGAT+AGG + chr5_1:68694264-68694283 None:intergenic 40.0%
!! GAAGAAGACTCTAGTCTTGT+TGG + chr5_1:68694318-68694337 None:intergenic 40.0%
CAAGCCACTAAAATCTTACC+CGG - chr5_1:68694652-68694671 Msa0746520:intron 40.0%
AAGCCACTAAAATCTTACCC+GGG - chr5_1:68694653-68694672 Msa0746520:intron 40.0%
!! ATGTTTTATTGTTCTCGGGG+AGG + chr5_1:68694687-68694706 None:intergenic 40.0%
GCTAGGAGGTAAGTAAAACA+TGG + chr5_1:68694768-68694787 None:intergenic 40.0%
!! ATTTTGGCAGGAGTATAGAG+TGG - chr5_1:68694858-68694877 Msa0746520:intron 40.0%
!! TTTTGGCAGGAGTATAGAGT+GGG - chr5_1:68694859-68694878 Msa0746520:intron 40.0%
GAATCAGATCCCCAATATGA+GGG + chr5_1:68694935-68694954 None:intergenic 40.0%
TGAATCAGATCCCCAATATG+AGG + chr5_1:68694936-68694955 None:intergenic 40.0%
TACAATCAGAGTAGCTAGCA+GGG + chr5_1:68695117-68695136 None:intergenic 40.0%
ATACAATCAGAGTAGCTAGC+AGG + chr5_1:68695118-68695137 None:intergenic 40.0%
GCTACTCTGATTGTATACAC+TGG - chr5_1:68695122-68695141 Msa0746520:intron 40.0%
TGTATACACTGGTGTTTACC+TGG - chr5_1:68695133-68695152 Msa0746520:intron 40.0%
TACCTGGACTTCAAGATACT+TGG - chr5_1:68695149-68695168 Msa0746520:intron 40.0%
TTCCAAGTATCTTGAAGTCC+AGG + chr5_1:68695154-68695173 None:intergenic 40.0%
! ATGGTGCTAACATATGTACG+CGG - chr5_1:68695391-68695410 Msa0746520:CDS 40.0%
TTGGATCAAATAGTGATGCG+AGG - chr5_1:68695647-68695666 Msa0746520:five_prime_UTR 40.0%
TGGATCAAATAGTGATGCGA+GGG - chr5_1:68695648-68695667 Msa0746520:five_prime_UTR 40.0%
GGATAAGAGGGTGAAGAGAT+AGG + chr5_1:68690343-68690362 None:intergenic 45.0%
GGAAGATGAAGAGGAAGTCA+TGG + chr5_1:68690398-68690417 None:intergenic 45.0%
! ACAGCGTGGGTTTCAGTTTT+GGG + chr5_1:68690444-68690463 None:intergenic 45.0%
! TACAGCGTGGGTTTCAGTTT+TGG + chr5_1:68690445-68690464 None:intergenic 45.0%
! CGTTGAAAAGAGTACAGCGT+GGG + chr5_1:68690457-68690476 None:intergenic 45.0%
! CCACGCTGTACTCTTTTCAA+CGG - chr5_1:68690455-68690474 Msa0746520:three_prime_UTR 45.0%
CGTTCAAGAGGTGGAGAAAA+AGG - chr5_1:68690497-68690516 Msa0746520:three_prime_UTR 45.0%
!! GTGATTTGTTCAGTGGAAGG+TGG - chr5_1:68690550-68690569 Msa0746520:three_prime_UTR 45.0%
! TGACTTGTCAAGAACATGGC+CGG - chr5_1:68690637-68690656 Msa0746520:three_prime_UTR 45.0%
TTTACGGGTCAAGTTAACGG+TGG - chr5_1:68690765-68690784 Msa0746520:CDS 45.0%
GTGGGTCAGAGTGTAATTGT+TGG - chr5_1:68690787-68690806 Msa0746520:CDS 45.0%
TTTGCAGGTCATGTCCCAAT+TGG + chr5_1:68692581-68692600 None:intergenic 45.0%
GTCCACAAGTCCTATCTCAA+CGG - chr5_1:68692860-68692879 Msa0746520:intron 45.0%
TAGAAACACTTCGTGGGAAG+AGG - chr5_1:68693157-68693176 Msa0746520:intron 45.0%
GGGAAGAGGATGATGTTTGT+TGG - chr5_1:68693171-68693190 Msa0746520:intron 45.0%
CATGTTGGGGAATGAGATGA+TGG + chr5_1:68693242-68693261 None:intergenic 45.0%
TCCCCAACATGCCAAATCTA+TGG - chr5_1:68693251-68693270 Msa0746520:intron 45.0%
TAAGAGGTAGCTAGCTACCT+TGG + chr5_1:68693307-68693326 None:intergenic 45.0%
GCACATAAGCTATGGGTAAG+AGG + chr5_1:68693323-68693342 None:intergenic 45.0%
ATCGCGGAATTAGCTATCGA+GGG + chr5_1:68693400-68693419 None:intergenic 45.0%
AATCGCGGAATTAGCTATCG+AGG + chr5_1:68693401-68693420 None:intergenic 45.0%
GAGATGCTTATGTGACGACT+TGG - chr5_1:68693499-68693518 Msa0746520:intron 45.0%
CAACCCAAAATGCATAGGTG+GGG - chr5_1:68693721-68693740 Msa0746520:intron 45.0%
AACCCAAAATGCATAGGTGG+GGG - chr5_1:68693722-68693741 Msa0746520:intron 45.0%
! TTCCCCCACCTATGCATTTT+GGG + chr5_1:68693727-68693746 None:intergenic 45.0%
! TTTCCCCCACCTATGCATTT+TGG + chr5_1:68693728-68693747 None:intergenic 45.0%
AAACTAAGGGGCCAAATCTG+CGG - chr5_1:68693764-68693783 Msa0746520:intron 45.0%
CCGATAATGCTGTCATCCAT+AGG - chr5_1:68693958-68693977 Msa0746520:intron 45.0%
AAGCACGGTCGTTATTGGAA+AGG - chr5_1:68694017-68694036 Msa0746520:intron 45.0%
!! TTGGAAAGGCGCAGACATTT+TGG - chr5_1:68694031-68694050 Msa0746520:intron 45.0%
! ACCTATCTTTGGTGGGTAAC+TGG - chr5_1:68694062-68694081 Msa0746520:intron 45.0%
! CTACCCGGGTAAGATTTTAG+TGG + chr5_1:68694659-68694678 None:intergenic 45.0%
!! ACGAACCGTTCTAGAGAATC+TGG - chr5_1:68694714-68694733 Msa0746520:intron 45.0%
! TTTGGCAGGAGTATAGAGTG+GGG - chr5_1:68694860-68694879 Msa0746520:intron 45.0%
ATGTGCGTCTTTACGGTAGT+TGG + chr5_1:68695041-68695060 None:intergenic 45.0%
GGATCAAATAGTGATGCGAG+GGG - chr5_1:68695649-68695668 Msa0746520:five_prime_UTR 45.0%
GATCAAATAGTGATGCGAGG+GGG - chr5_1:68695650-68695669 Msa0746520:five_prime_UTR 45.0%
!! AATAAATAATAAAAAACATT+CGG - chr5_1:68690874-68690893 Msa0746520:CDS 5.0%
!!! ATGATTATTTTTTATTTTTT+TGG - chr5_1:68695287-68695306 Msa0746520:CDS 5.0%
!!! AGTGTTTTGGGGTCCATGCA+TGG - chr5_1:68690263-68690282 Msa0746520:three_prime_UTR 50.0%
!! ATGGGTGTTGAGGATGATGG+CGG + chr5_1:68690379-68690398 None:intergenic 50.0%
!! GTCATGGGTGTTGAGGATGA+TGG + chr5_1:68690382-68690401 None:intergenic 50.0%
! AGAGGAAGTCATGGGTGTTG+AGG + chr5_1:68690389-68690408 None:intergenic 50.0%
GATGTGGACGGAAGATGAAG+AGG + chr5_1:68690407-68690426 None:intergenic 50.0%
GGAGTTGTTGGAGATGTGGA+CGG + chr5_1:68690419-68690438 None:intergenic 50.0%
!!! CAGTTTTGGGGTGGAGTTGT+TGG + chr5_1:68690431-68690450 None:intergenic 50.0%
! CAGCGTGGGTTTCAGTTTTG+GGG + chr5_1:68690443-68690462 None:intergenic 50.0%
! CCGTTGAAAAGAGTACAGCG+TGG + chr5_1:68690458-68690477 None:intergenic 50.0%
GTCCAACAACACCGTTCAAG+AGG - chr5_1:68690485-68690504 Msa0746520:three_prime_UTR 50.0%
!! CACCTCTTGAACGGTGTTGT+TGG + chr5_1:68690490-68690509 None:intergenic 50.0%
CAACAACACCGTTCAAGAGG+TGG - chr5_1:68690488-68690507 Msa0746520:three_prime_UTR 50.0%
GTTCAGTGGAAGGTGGGTAA+AGG - chr5_1:68690557-68690576 Msa0746520:three_prime_UTR 50.0%
AACCGGCGGTACTCTTTATC+CGG + chr5_1:68690663-68690682 None:intergenic 50.0%
!! ATAAAGAGTACCGCCGGTTG+CGG - chr5_1:68690664-68690683 Msa0746520:exon 50.0%
CACATTGCAGAGTTCGAACC+AGG + chr5_1:68691144-68691163 None:intergenic 50.0%
GGCAAACAAGGCGGTAGAAT+CGG - chr5_1:68691288-68691307 Msa0746520:intron 50.0%
AGTCCACCTAAATTGGCGCT+AGG - chr5_1:68691482-68691501 Msa0746520:intron 50.0%
CTTCCTAGCGCCAATTTAGG+TGG + chr5_1:68691488-68691507 None:intergenic 50.0%
GAATCGAAACTGAGACCTCG+AGG - chr5_1:68691507-68691526 Msa0746520:intron 50.0%
! ACGGTCCCTCAGAACTTTTG+AGG + chr5_1:68692376-68692395 None:intergenic 50.0%
AGGAGGATCAGTAGTGGTCA+CGG + chr5_1:68692395-68692414 None:intergenic 50.0%
GCTAGAAGGAGGATCAGTAG+TGG + chr5_1:68692401-68692420 None:intergenic 50.0%
CAAACTTGGACGGAGCTAGA+AGG + chr5_1:68692415-68692434 None:intergenic 50.0%
! TCTAGCTCCGTCCAAGTTTG+AGG - chr5_1:68692415-68692434 Msa0746520:intron 50.0%
ACCATATGGGGTCCTCCAAT+TGG - chr5_1:68692563-68692582 Msa0746520:intron 50.0%
CCATATGGGGTCCTCCAATT+GGG - chr5_1:68692564-68692583 Msa0746520:intron 50.0%
GTCCGTTGAGATAGGACTTG+TGG + chr5_1:68692865-68692884 None:intergenic 50.0%
TTGTTGGGGACTCCCTCAAT+CGG - chr5_1:68693187-68693206 Msa0746520:intron 50.0%
GACATACTGACCCCGATTGA+GGG + chr5_1:68693202-68693221 None:intergenic 50.0%
AGACATACTGACCCCGATTG+AGG + chr5_1:68693203-68693222 None:intergenic 50.0%
!! GGGGAATGAGATGATGGAGA+AGG + chr5_1:68693236-68693255 None:intergenic 50.0%
TCTCACTGTCTTCACAGCCA+AGG - chr5_1:68693287-68693306 Msa0746520:intron 50.0%
GCCAGTTACCCACCAAAGAT+AGG + chr5_1:68694066-68694085 None:intergenic 50.0%
AACAGAGGAAGCCTATCGCA+TGG - chr5_1:68694250-68694269 Msa0746520:intron 50.0%
AAACTCGGAGTCCCTGTCTT+CGG - chr5_1:68694384-68694403 Msa0746520:intron 50.0%
! TCGGGCCAGATTCTCTAGAA+CGG + chr5_1:68694722-68694741 None:intergenic 50.0%
TCATTGTAGCAGTTCCCTCC+TGG + chr5_1:68694893-68694912 None:intergenic 50.0%
!! GCTAGTTGCTCTGGAGTCAA+TGG + chr5_1:68695091-68695110 None:intergenic 50.0%
! GATGGCGGTGAAGAGGATGA+TGG + chr5_1:68690364-68690383 None:intergenic 55.0%
!! TGAGGATGATGGCGGTGAAG+AGG + chr5_1:68690371-68690390 None:intergenic 55.0%
GGGTGGAGTTGTTGGAGATG+TGG + chr5_1:68690423-68690442 None:intergenic 55.0%
!!! CGTGGGTTTCAGTTTTGGGG+TGG + chr5_1:68690440-68690459 None:intergenic 55.0%
TTGTCAAGAACATGGCCGGC+CGG - chr5_1:68690641-68690660 Msa0746520:three_prime_UTR 55.0%
ACGGGTCAAGTTAACGGTGG+TGG - chr5_1:68690768-68690787 Msa0746520:CDS 55.0%
CGGGTCAAGTTAACGGTGGT+GGG - chr5_1:68690769-68690788 Msa0746520:CDS 55.0%
TCGAAACTGAGACCTCGAGG+TGG - chr5_1:68691510-68691529 Msa0746520:intron 55.0%
ACTTGGACGGAGCTAGAAGG+AGG + chr5_1:68692412-68692431 None:intergenic 55.0%
CCCAATTGGAGGACCCCATA+TGG + chr5_1:68692567-68692586 None:intergenic 55.0%
GCAGGTCATGTCCCAATTGG+AGG + chr5_1:68692578-68692597 None:intergenic 55.0%
TGTTGGGGACTCCCTCAATC+GGG - chr5_1:68693188-68693207 Msa0746520:intron 55.0%
ACCAGCATGTCGCCTTCTCA+TGG - chr5_1:68694338-68694357 Msa0746520:intron 55.0%
TCCATGAGAAGGCGACATGC+TGG + chr5_1:68694342-68694361 None:intergenic 55.0%
AACTCGGAGTCCCTGTCTTC+GGG - chr5_1:68694385-68694404 Msa0746520:intron 55.0%
GCAGTGTGACTGCACACAGT+CGG + chr5_1:68694790-68694809 None:intergenic 55.0%
! GCAGGAGTATAGAGTGGGGA+GGG - chr5_1:68694864-68694883 Msa0746520:intron 55.0%
! CAGGAGTATAGAGTGGGGAG+GGG - chr5_1:68694865-68694884 Msa0746520:intron 55.0%
!! GCAGGGTTAGCTAGTTGCTC+TGG + chr5_1:68695100-68695119 None:intergenic 55.0%
TGATGCGAGGGGGTTCCATT+TGG - chr5_1:68695660-68695679 Msa0746520:five_prime_UTR 55.0%
GATGCGAGGGGGTTCCATTT+GGG - chr5_1:68695661-68695680 Msa0746520:five_prime_UTR 55.0%
GGCGGTACTCTTTATCCGGC+CGG + chr5_1:68690659-68690678 None:intergenic 60.0%
!! GGCCGGATAAAGAGTACCGC+CGG - chr5_1:68690658-68690677 Msa0746520:exon 60.0%
TTGGGAAGATCGCAGCCGTG+AGG + chr5_1:68690696-68690715 None:intergenic 60.0%
GTTGGGGACTCCCTCAATCG+GGG - chr5_1:68693189-68693208 Msa0746520:intron 60.0%
ACTCGGAGTCCCTGTCTTCG+GGG - chr5_1:68694386-68694405 Msa0746520:intron 60.0%
TCGGGGAGGATTGTCTACCC+GGG + chr5_1:68694673-68694692 None:intergenic 60.0%
CTCGGGGAGGATTGTCTACC+CGG + chr5_1:68694674-68694693 None:intergenic 60.0%
ACTGCACACAGTCGGCTAGG+AGG + chr5_1:68694782-68694801 None:intergenic 60.0%
GTGACTGCACACAGTCGGCT+AGG + chr5_1:68694785-68694804 None:intergenic 60.0%
! GGCAGGAGTATAGAGTGGGG+AGG - chr5_1:68694863-68694882 Msa0746520:intron 60.0%
!! AAGAGTACCGCCGGTTGCGG+TGG - chr5_1:68690667-68690686 Msa0746520:exon 65.0%
! TGGGAGTGTGCTCCACCTCG+AGG + chr5_1:68691525-68691544 None:intergenic 65.0%
TCGAGGTGGAGCACACTCCC+AGG - chr5_1:68691524-68691543 Msa0746520:CDS 65.0%
GCGGGGAATCCCCGAAGACA+GGG + chr5_1:68694398-68694417 None:intergenic 65.0%
AGCGGGGAATCCCCGAAGAC+AGG + chr5_1:68694399-68694418 None:intergenic 65.0%
ATAGAGTGGGGAGGGGAGCC+AGG - chr5_1:68694872-68694891 Msa0746520:intron 65.0%
CGTGAGGCTGCCACCGCAAC+CGG + chr5_1:68690680-68690699 None:intergenic 70.0%
CGGTTGCGGTGGCAGCCTCA+CGG - chr5_1:68690678-68690697 Msa0746520:CDS 70.0%
AGTGGGGAGGGGAGCCAGGA+GGG - chr5_1:68694876-68694895 Msa0746520:intron 70.0%
GAGGCTGCCACCGCAACCGG+CGG + chr5_1:68690677-68690696 None:intergenic 75.0%
GAGTGGGGAGGGGAGCCAGG+AGG - chr5_1:68694875-68694894 Msa0746520:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 68690178 68695699 68690178 ID=Msa0746520;Name=Msa0746520
chr5_1 mRNA 68690178 68695699 68690178 ID=Msa0746520-mRNA-1;Parent=Msa0746520;Name=Msa0746520-mRNA-1;_AED=0.38;_eAED=0.38;_QI=104|1|1|1|0.8|0.66|6|463|434
chr5_1 exon 68690178 68690207 68690178 ID=Msa0746520-mRNA-1:exon:20525;Parent=Msa0746520-mRNA-1
chr5_1 exon 68690237 68691009 68690237 ID=Msa0746520-mRNA-1:exon:20524;Parent=Msa0746520-mRNA-1
chr5_1 exon 68691514 68691672 68691514 ID=Msa0746520-mRNA-1:exon:20523;Parent=Msa0746520-mRNA-1
chr5_1 exon 68691775 68691974 68691775 ID=Msa0746520-mRNA-1:exon:20522;Parent=Msa0746520-mRNA-1
chr5_1 exon 68692569 68692740 68692569 ID=Msa0746520-mRNA-1:exon:20521;Parent=Msa0746520-mRNA-1
chr5_1 exon 68695162 68695699 68695162 ID=Msa0746520-mRNA-1:exon:20520;Parent=Msa0746520-mRNA-1
chr5_1 five_prime_UTR 68695596 68695699 68695596 ID=Msa0746520-mRNA-1:five_prime_utr;Parent=Msa0746520-mRNA-1
chr5_1 CDS 68695162 68695595 68695162 ID=Msa0746520-mRNA-1:cds;Parent=Msa0746520-mRNA-1
chr5_1 CDS 68692569 68692740 68692569 ID=Msa0746520-mRNA-1:cds;Parent=Msa0746520-mRNA-1
chr5_1 CDS 68691775 68691974 68691775 ID=Msa0746520-mRNA-1:cds;Parent=Msa0746520-mRNA-1
chr5_1 CDS 68691514 68691672 68691514 ID=Msa0746520-mRNA-1:cds;Parent=Msa0746520-mRNA-1
chr5_1 CDS 68690670 68691009 68690670 ID=Msa0746520-mRNA-1:cds;Parent=Msa0746520-mRNA-1
chr5_1 three_prime_UTR 68690237 68690669 68690237 ID=Msa0746520-mRNA-1:three_prime_utr;Parent=Msa0746520-mRNA-1
chr5_1 three_prime_UTR 68690178 68690207 68690178 ID=Msa0746520-mRNA-1:three_prime_utr;Parent=Msa0746520-mRNA-1
Gene Sequence

>Msa0746520

ATGGCAAACTCATTCAACCCTTCTTCTCTTCTTCTCAGAACAAAGCCTCGTCTTTCTTCCTATCTCTTCACCCTCTTATCCATCATCCTCTTCACCGCCATCATCCTCAACACCCATGACTTCCTCTTCATCTTCCGTCCACATCTCCAACAACTCCACCCCAAAACTGAAACCCACGCTGTACTCTTTTCAACGGTGACTCAGTCCAACAACACCGTTCAAGAGGTGGAGAAAAAGGAAGAAGAAGAAGATGAAGAAGAGAAAGAGTGTGATTTGTTCAGTGGAAGGTGGGTAAAGGATGAGTTAACTAGGCCATTATATGAAGAATCTGAGTGTCCGTATATACAACCACAGTTGACTTGTCAAGAACATGGCCGGCCGGATAAAGAGTACCGCCGGTTGCGGTGGCAGCCTCACGGCTGCGATCTTCCCAAATTCAATGCGAGTTTAATGCTAGAAACACTTCGTGGGAAGAGGATGATGTTTGTTGGGGACTCCCTCAATCGGGGTCAGTATGTCTCTTTGATATGCCTTCTCCATCATCTCATTCCCCAACATGCCAAATCTATGGAAACCTTTGATTCTCTCACTGTCTTCACAGCCAAGGAATACAATGCTACAATTGAGTTCTATTGGGCACCTTTTCTTCTTGAATCAAACTCCGATAATGCTGTCATCCATAGGGTAACTGATAGAATTGTAAGAAAGGGTTCAATCAATAAGCACGGTCGTTATTGGAAAGGCGCAGACATTTTGGTCTTCAACACCTATCTTTGGTGGGTAACTGGCTCCAACATGAAGATATTGCTTGGTTCTTTTAAGGATGAAGTAAAAGAGATTGTTGAGATGCAAACAGAGGAAGCCTATCGCATGGCTATGAAAAGTATGCTTAGATGGGTGAAAATGAACATGGATCCCAACAAGACTAGAGTCTTCTTCACCAGCATGTCGCCTTCTCATGGAAAGAGTATAGAGTGGGGAGGGGAGCCAGGAGGGAACTGCTACAATGAAACAACTCCAATTGAAGAACCCTCATATTGGGGATCTGATTCATTGAAAAGCATAATGCAAGTAATTGGAGAAGAGTTCAGAAAATCAAAATTTCCCATAACATTTCTCAACATCACTCAACTTTCCAACTACCGTAAAGACGCACATACATCTATCTACAAAAAGCAATGGAATCCATTGACTCCAGAGCAACTAGCTAACCCTGCTAGCTACTCTGATTGTATACACTGGTGTTTACCTGGACTTCAAGATACTTGGAACGAGCTTCTATTTGCCAAGTTGTTTTATCCTTGA
Protein sequence

>Msa0746520

MANSFNPSSLLLRTKPRLSSYLFTLLSIILFTAIILNTHDFLFIFRPHLQQLHPKTETHAVLFSTVTQSNNTVQEVEKKEEEEDEEEKECDLFSGRWVKDELTRPLYEESECPYIQPQLTCQEHGRPDKEYRRLRWQPHGCDLPKFNASLMLETLRGKRMMFVGDSLNRGQYVSLICLLHHLIPQHAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVIHRVTDRIVRKGSINKHGRYWKGADILVFNTYLWWVTGSNMKILLGSFKDEVKEIVEMQTEEAYRMAMKSMLRWVKMNMDPNKTRVFFTSMSPSHGKSIEWGGEPGGNCYNETTPIEEPSYWGSDSLKSIMQVIGEEFRKSKFPITFLNITQLSNYRKDAHTSIYKKQWNPLTPEQLANPASYSDCIHWCLPGLQDTWNELLFAKLFYP*