AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0417160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0417160 MtrunA17_Chr3g0114551 97.320 597 16 0 1 597 1 597 0.0 1187
Msa0417160 MtrunA17_Chr5g0438111 52.517 596 200 12 12 602 18 535 6.04e-172 499
Msa0417160 MtrunA17_Chr7g0244501 36.130 584 302 11 21 591 27 552 2.14e-85 277
Msa0417160 MtrunA17_Chr4g0013151 37.268 593 285 13 16 591 80 602 1.55e-80 266
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0417160 AT2G40480.1 60.000 210 57 5 9 218 42 224 4.47e-65 222
Msa0417160 AT2G40480.1 42.958 284 114 9 332 602 268 516 4.83e-37 145
Msa0417160 AT2G38370.1 32.653 588 281 18 21 594 18 504 8.29e-47 172
Msa0417160 AT2G38370.2 32.483 588 282 17 21 594 35 521 1.47e-46 172
Msa0417160 AT3G56270.1 43.069 202 74 6 13 205 24 193 7.73e-34 134
Msa0417160 AT3G51720.1 39.796 196 67 5 24 218 11 156 1.47e-16 82.8

Find 146 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTATTCATGATTCATTAT+TGG 0.212717 3_2:-64238101 Msa0417160:three_prime_UTR
GACCTTGGATTCCTCTTTAC+AGG 0.219179 3_2:-64240966 Msa0417160:CDS
TCATGATCTTTCTCGGCTTT+TGG 0.235373 3_2:+64238245 None:intergenic
TCGAATCTATTACCTTCTTC+AGG 0.249342 3_2:+64238729 None:intergenic
CCGAGACGGGAAGCGGAATT+AGG 0.257013 3_2:-64241071 Msa0417160:CDS
CTAGGGAAGCTCTGCGGATA+TGG 0.281636 3_2:-64238562 Msa0417160:CDS
GGTTGGAACTCCTGTTATTA+AGG 0.293856 3_2:-64239560 Msa0417160:CDS
TGCTCTTGATACACAGATAA+AGG 0.314596 3_2:+64239127 None:intergenic
ATCACTCTCATGATCTTTCT+CGG 0.315953 3_2:+64238238 None:intergenic
TTGAAATTCCTCGTATTTGC+AGG 0.319482 3_2:+64239055 None:intergenic
GTAGATTATGTTGTTCTCAT+TGG 0.331774 3_2:-64237942 Msa0417160:three_prime_UTR
TTCTCTTCTTTCCATGGAAA+TGG 0.333866 3_2:-64241115 Msa0417160:exon
CAAATACGAGGAATTTCAAT+TGG 0.334836 3_2:-64239051 Msa0417160:CDS
TTATTCATCTCCTTAATAAC+AGG 0.336238 3_2:+64239550 None:intergenic
TTCTTACTAGGCCTAGTCAT+AGG 0.340086 3_2:+64238161 None:intergenic
CTTTATTCTACATAAATAAC+AGG 0.340938 3_2:+64238062 None:intergenic
AAATATAAATTTATTTATAC+AGG 0.344468 3_2:+64237793 None:intergenic
ATCATAGCCTTGGGGTTTAG+AGG 0.348939 3_2:+64238770 None:intergenic
GTGCTGTGTTTATTCTCTAC+AGG 0.353325 3_2:-64237906 Msa0417160:three_prime_UTR
TAAGTCCTCCACAATCCTTT+TGG 0.354264 3_2:+64239648 None:intergenic
TAGATTATGTTGTTCTCATT+GGG 0.355896 3_2:-64237941 Msa0417160:three_prime_UTR
AAGTCCATTAAAATCATATC+AGG 0.356258 3_2:+64239451 None:intergenic
CCCTCAGTGCTCGAAGCATT+TGG 0.357659 3_2:+64238285 None:intergenic
TTTCTTGCAGCATATCCTTC+AGG 0.358035 3_2:+64238350 None:intergenic
TAGTCATAGGGAGTGATATA+TGG 0.360360 3_2:+64238174 None:intergenic
GAAGTTGTTGGCCTCGAAAC+AGG 0.360536 3_2:+64238404 None:intergenic
AAAGTGACTTTCCGAGGTTC+AGG 0.361569 3_2:+64238812 None:intergenic
GCTGAAATCAAGGCTCTATC+TGG 0.364546 3_2:-64238863 Msa0417160:CDS
GGATACCGGAGGTTGATCTA+AGG 0.371692 3_2:-64238541 Msa0417160:CDS
TGTTCATTAGAATTTAAATC+TGG 0.378748 3_2:+64239583 None:intergenic
GAAAAGGGTAAGCTTTCATT+TGG 0.382921 3_2:+64241302 None:intergenic
TTTGCTTTGTAAAATTTCTT+CGG 0.387420 3_2:+64238643 None:intergenic
TGTTTATTCTCTACAGGGTA+TGG 0.392007 3_2:-64237900 Msa0417160:three_prime_UTR
CGAACTTTCTCTTCTTTCCA+TGG 0.392157 3_2:-64241121 Msa0417160:exon
AAGGAAGCTGTGACTCGTTT+CGG 0.396284 3_2:-64240997 Msa0417160:CDS
GAAGATGTATATTCTGAAAC+TGG 0.401042 3_2:-64237980 Msa0417160:three_prime_UTR
TGGCACCGAGGAAGAAGTTT+GGG 0.410408 3_2:-64238202 Msa0417160:CDS
TTGATAATCATGCAAATATG+AGG 0.412046 3_2:-64239213 Msa0417160:CDS
ACATCTCTCATTGAAGTTGT+TGG 0.413419 3_2:+64238392 None:intergenic
GTGGCACCGAGGAAGAAGTT+TGG 0.414776 3_2:-64238203 Msa0417160:CDS
AGATTTAAATTCTAATGAAC+AGG 0.416037 3_2:-64239581 Msa0417160:CDS
TTTATTTATACAGGTACAAA+TGG 0.417774 3_2:+64237802 None:intergenic
TCAGGCATCATCATAGCCTT+GGG 0.418203 3_2:+64238761 None:intergenic
TCCGCTTCCCGTCTCGGCGC+CGG 0.422200 3_2:+64241077 None:intergenic
TGGATTCCTCTTTACAGGCT+TGG 0.425331 3_2:-64240961 Msa0417160:CDS
TTCTTCAGGGTTGAATCATC+AGG 0.432293 3_2:+64238743 None:intergenic
CGCGATGCCGGCGCCGAGAC+GGG 0.433111 3_2:-64241084 Msa0417160:CDS
CGAATCTATTACCTTCTTCA+GGG 0.433248 3_2:+64238730 None:intergenic
GTTGTTGACCTGGTTACATC+TGG 0.441935 3_2:+64238446 None:intergenic
AACTTCTTCCTCGGTGCCAC+AGG 0.445731 3_2:+64238206 None:intergenic
ATCAGGCATCATCATAGCCT+TGG 0.446927 3_2:+64238760 None:intergenic
CCTAATTCCGCTTCCCGTCT+CGG 0.447289 3_2:+64241071 None:intergenic
GGAGGAACAAGCAGCTGAGT+TGG 0.447687 3_2:-64239731 Msa0417160:CDS
TAGTCTGATTGTAAAATTGT+TGG 0.458836 3_2:-64237861 Msa0417160:three_prime_UTR
ATGGCGGAAACTCGCGATGC+CGG 0.458958 3_2:-64241096 Msa0417160:CDS
GAGATGAATAAAGAAACTAA+TGG 0.459896 3_2:-64239538 Msa0417160:CDS
AGATGAATAAAGAAACTAAT+GGG 0.460253 3_2:-64239537 Msa0417160:CDS
GCGAGTTTCCGCCATTTCCA+TGG 0.460432 3_2:+64241104 None:intergenic
TCGGAAAGAGTGATGAAGAT+TGG 0.460912 3_2:+64241177 None:intergenic
AAACAAGCCAAAGTGAATCT+TGG 0.466187 3_2:-64239427 Msa0417160:CDS
AGTAATACCAAGATTCACTT+TGG 0.470971 3_2:+64239420 None:intergenic
GCCGGCGCCGAGACGGGAAG+CGG 0.477153 3_2:-64241078 Msa0417160:CDS
TGCTCGTCATACACAGATAA+GGG 0.484366 3_2:+64238974 None:intergenic
GTGACTCGTTTCGGTGGAAG+TGG 0.490192 3_2:-64240988 Msa0417160:CDS
TCTTACTAGGCCTAGTCATA+GGG 0.492874 3_2:+64238162 None:intergenic
AAATACGAGGAATTTCAATT+GGG 0.493979 3_2:-64239050 Msa0417160:CDS
GTTTCGGTGGAAGTGGACCT+TGG 0.497039 3_2:-64240981 Msa0417160:CDS
TCGCGATGCCGGCGCCGAGA+CGG 0.501945 3_2:-64241085 Msa0417160:CDS
ATAGAAAACAACATGCTGCT+AGG 0.502454 3_2:-64238580 Msa0417160:CDS
CTTCTTTACCAGATGTAACC+AGG 0.504828 3_2:-64238454 Msa0417160:CDS
TGACTAGGCCTAGTAAGAAA+AGG 0.505008 3_2:-64238157 Msa0417160:CDS
GATGTAACCAGGTCAACAAC+AGG 0.505517 3_2:-64238443 Msa0417160:CDS
TATTGCTCTTGCTGAAATCA+AGG 0.507819 3_2:-64238873 Msa0417160:CDS
TAAAGTATGTGTGGTGTGAC+TGG 0.511072 3_2:-64238044 Msa0417160:three_prime_UTR
GATGACATAGAGCATGAACT+TGG 0.512362 3_2:+64239475 None:intergenic
AATTCGCTCGGCCTGAACCT+CGG 0.517660 3_2:-64238823 Msa0417160:CDS
AAAACTTATATAAATACCAT+TGG 0.518849 3_2:-64237828 Msa0417160:three_prime_UTR
TGAAGGATATGCTGCAAGAA+AGG 0.521232 3_2:-64238348 Msa0417160:CDS
AGAGATCATTTGAATTCGCT+CGG 0.521555 3_2:-64238835 Msa0417160:CDS
AAGAACTAGGTGCAACCAAA+AGG 0.522233 3_2:-64239663 Msa0417160:CDS
TTTAAATGAAAAGATGAAGA+AGG 0.524255 3_2:-64239359 Msa0417160:CDS
TAGAAAACAACATGCTGCTA+GGG 0.525518 3_2:-64238579 Msa0417160:CDS
TACATCGCCTCCGTTCGAAT+CGG 0.526093 3_2:-64241022 Msa0417160:CDS
TTAAATTCTAATGAACAGGT+TGG 0.526876 3_2:-64239577 Msa0417160:CDS
GTGCTCGTCATACACAGATA+AGG 0.529197 3_2:+64238973 None:intergenic
TCCTTGACCGATTCGAACGG+AGG 0.529392 3_2:+64241015 None:intergenic
CTTGACGTGCTCGAAGAACT+AGG 0.531896 3_2:-64239676 Msa0417160:CDS
GTGAATTCCACATTAGATGA+TGG 0.533699 3_2:+64239238 None:intergenic
TGCTGTGTTTATTCTCTACA+GGG 0.534612 3_2:-64237905 Msa0417160:three_prime_UTR
AGCTCTGCGGATATGGATAC+CGG 0.537367 3_2:-64238555 Msa0417160:CDS
CCAAATGCTTCGAGCACTGA+GGG 0.539977 3_2:-64238285 Msa0417160:CDS
TGATGATTCAACCCTGAAGA+AGG 0.541681 3_2:-64238741 Msa0417160:CDS
ATAATCAAAAGCCTGTTTCG+AGG 0.541883 3_2:-64238415 Msa0417160:CDS
TTCTCCCTTAGATCAACCTC+CGG 0.545981 3_2:+64238536 None:intergenic
CGCGTGTTTCAGAGAAGCAT+CGG 0.546917 3_2:+64241158 None:intergenic
GTGAATTCAACATGAGATGA+TGG 0.547205 3_2:+64239088 None:intergenic
CTGTGTATCAAGAGCAAGCA+AGG 0.553155 3_2:-64239120 Msa0417160:CDS
GCTTCGCCAAGCCTGTAAAG+AGG 0.557465 3_2:+64240955 None:intergenic
GGCTGCAAGCCACCTCATCT+CGG 0.558105 3_2:+64238931 None:intergenic
ACAAGCAGCTGAGTTGGAGA+AGG 0.567327 3_2:-64239725 Msa0417160:CDS
GGGTATGGAGGTCTTACCAT+TGG 0.571442 3_2:-64237885 Msa0417160:three_prime_UTR
AAAGATGGAAGAAGCTGCAA+AGG 0.572753 3_2:-64238906 Msa0417160:CDS
TCTTCTTTCCATGGAAATGG+CGG 0.574630 3_2:-64241112 Msa0417160:exon
ATGAACCCAAACTTCTTCCT+CGG 0.575518 3_2:+64238197 None:intergenic
AGCTGTGTCTGCTCAAGAGA+AGG 0.575900 3_2:-64239287 Msa0417160:CDS
AGAATTTAAATCTGGAGTTG+CGG 0.578490 3_2:+64239591 None:intergenic
ATATGCTGCAAGAAAGGAGA+TGG 0.581193 3_2:-64238342 Msa0417160:CDS
GCCTCCGTTCGAATCGGTCA+AGG 0.583871 3_2:-64241016 Msa0417160:CDS
AGGTGCAACCAAAAGGATTG+TGG 0.584947 3_2:-64239656 Msa0417160:CDS
TTCTGAGCAGCACAATAGAA+TGG 0.586098 3_2:-64239176 Msa0417160:CDS
GACGGGAAGCGGAATTAGGA+AGG 0.587170 3_2:-64241067 Msa0417160:CDS
GAGTCTCGAGGAAGATCCAT+TGG 0.587750 3_2:+64241199 None:intergenic
TCTCATTGGGTGCATTAGAG+TGG 0.590296 3_2:-64237928 Msa0417160:three_prime_UTR
GTGTTAAGACCGCCGAGATG+AGG 0.591497 3_2:-64238943 Msa0417160:CDS
GATACCGGAGGTTGATCTAA+GGG 0.595565 3_2:-64238540 Msa0417160:CDS
GAATTCACCATCATCTAATG+TGG 0.599035 3_2:-64239245 Msa0417160:CDS
GAAGCTGTGACTCGTTTCGG+TGG 0.600965 3_2:-64240994 Msa0417160:CDS
AGCAGAAAGCAAGTTCCTGA+AGG 0.605168 3_2:-64238365 Msa0417160:CDS
ATATATCACTCCCTATGACT+AGG 0.605664 3_2:-64238172 Msa0417160:CDS
TTATTCTCTACAGGGTATGG+AGG 0.606753 3_2:-64237897 Msa0417160:three_prime_UTR
AAAGCAAAAGTGACTTTCCG+AGG 0.609709 3_2:+64238806 None:intergenic
TATTACTATGAATGAACTTG+AGG 0.611180 3_2:-64239404 Msa0417160:CDS
AGCCTGTAAAGAGGAATCCA+AGG 0.613208 3_2:+64240964 None:intergenic
TTAAGACCGCCGAGATGAGG+TGG 0.613955 3_2:-64238940 Msa0417160:CDS
GCTTGCATAAATTCCACCAA+TGG 0.616620 3_2:-64241215 Msa0417160:five_prime_UTR
CAGGTACAAATGGTAACCAA+TGG 0.620125 3_2:+64237812 None:intergenic
TGATGAAGATTGGAGTCTCG+AGG 0.623665 3_2:+64241187 None:intergenic
TTTACAATCAGACTAACCAA+TGG 0.630279 3_2:+64237869 None:intergenic
TTGATAATCCTGCAAATACG+AGG 0.631596 3_2:-64239063 Msa0417160:CDS
AGATGGAAGAGCATACTGAA+AGG 0.631710 3_2:-64238325 Msa0417160:CDS
GCTTCCTTGACCGATTCGAA+CGG 0.635721 3_2:+64241012 None:intergenic
TCTCGAGGAAGATCCATTGG+TGG 0.646313 3_2:+64241202 None:intergenic
CAGGCATCATCATAGCCTTG+GGG 0.662776 3_2:+64238762 None:intergenic
AAACTCTCCTCTAAACCCCA+AGG 0.665850 3_2:-64238777 Msa0417160:CDS
AGAGCATACTGAAAGGCGAA+AGG 0.668122 3_2:-64238318 Msa0417160:CDS
TGCAAGCCACCTCATCTCGG+CGG 0.669010 3_2:+64238934 None:intergenic
AAGCGTGATGATGATGTCGC+GGG 0.670483 3_2:+64241234 None:intergenic
TGCAACCAAAAGGATTGTGG+AGG 0.672791 3_2:-64239653 Msa0417160:CDS
TATGTAGAATAAAGTATGTG+TGG 0.674808 3_2:-64238053 Msa0417160:three_prime_UTR
CAAGCGTGATGATGATGTCG+CGG 0.678325 3_2:+64241233 None:intergenic
GCCAAATGCTTCGAGCACTG+AGG 0.688437 3_2:-64238286 Msa0417160:CDS
AATTCAACATGAGATGATGG+TGG 0.691633 3_2:+64239091 None:intergenic
GAGTGATCAAAAGCAGCCTG+TGG 0.701282 3_2:-64238222 Msa0417160:CDS
TCTGCGGATATGGATACCGG+AGG 0.701435 3_2:-64238552 Msa0417160:CDS
AAAAGCAGCCTGTGGCACCG+AGG 0.735993 3_2:-64238214 Msa0417160:CDS
ATGCTGCTAGGGAAGCTCTG+CGG 0.771301 3_2:-64238568 Msa0417160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAATTTATATTTTTTTT+TGG - chr3_2:64241307-64241326 Msa0417160:five_prime_UTR 0.0%
!!! AAATTTATATTTTTTTTTGG+AGG - chr3_2:64241310-64241329 Msa0417160:five_prime_UTR 10.0%
!!! AATTTATATTTTTTTTTGGA+GGG - chr3_2:64241311-64241330 Msa0417160:five_prime_UTR 10.0%
!!! ATTGATAATTTTCACTATAT+TGG - chr3_2:64238284-64238303 Msa0417160:CDS 15.0%
!!! TTGATAATTTTCACTATATT+GGG - chr3_2:64238285-64238304 Msa0417160:CDS 15.0%
!!! AAATATTAAGTTAAGTTGTT+GGG - chr3_2:64238361-64238380 Msa0417160:CDS 15.0%
!!! TGAACTTTTTTTTTTTTTTG+TGG - chr3_2:64238675-64238694 Msa0417160:CDS 15.0%
!! TTAACTTATTATTAGAGAAA+TGG - chr3_2:64238803-64238822 Msa0417160:CDS 15.0%
!! TAACTTATTATTAGAGAAAT+GGG - chr3_2:64238804-64238823 Msa0417160:CDS 15.0%
!! TCTAAAAATCATTAATTGTT+TGG - chr3_2:64238888-64238907 Msa0417160:CDS 15.0%
!! AAAACTTATATAAATACCAT+TGG - chr3_2:64241264-64241283 Msa0417160:five_prime_UTR 15.0%
!! AGAAGAAAAGAAAAAGAAAA+GGG + chr3_2:64237808-64237827 None:intergenic 20.0%
!! AAGAAGAAAAGAAAAAGAAA+AGG + chr3_2:64237809-64237828 None:intergenic 20.0%
!!! GAAATATTAAGTTAAGTTGT+TGG - chr3_2:64238360-64238379 Msa0417160:CDS 20.0%
!! AGTTAAAAACCAAATACTTA+TGG + chr3_2:64238465-64238484 None:intergenic 20.0%
!!! AGTATTTGGTTTTTAACTTT+AGG - chr3_2:64238467-64238486 Msa0417160:CDS 20.0%
!! AAATACATATAACCTTACAA+GGG + chr3_2:64238498-64238517 None:intergenic 20.0%
!! TAAATACATATAACCTTACA+AGG + chr3_2:64238499-64238518 None:intergenic 20.0%
!! TATTTATAGAGAAGTTAGAA+AGG - chr3_2:64238513-64238532 Msa0417160:CDS 20.0%
!! ATTTATAGAGAAGTTAGAAA+GGG - chr3_2:64238514-64238533 Msa0417160:CDS 20.0%
!! CATGAAAAGAAAAATTGAAA+AGG + chr3_2:64238631-64238650 None:intergenic 20.0%
!!! CTTTTCAATTTTTCTTTTCA+TGG - chr3_2:64238629-64238648 Msa0417160:CDS 20.0%
!! AACTTATTATTAGAGAAATG+GGG - chr3_2:64238805-64238824 Msa0417160:CDS 20.0%
!!! CAATTAATGATTTTTAGAGA+TGG + chr3_2:64238886-64238905 None:intergenic 20.0%
!! TTAAATAGATCAATCATACA+GGG + chr3_2:64239227-64239246 None:intergenic 20.0%
!! TTTAAATAGATCAATCATAC+AGG + chr3_2:64239228-64239247 None:intergenic 20.0%
!!! AGATTTTGATATAAAGAAAG+TGG - chr3_2:64239340-64239359 Msa0417160:CDS 20.0%
!! TGTTCATTAGAATTTAAATC+TGG + chr3_2:64239512-64239531 None:intergenic 20.0%
!! AGATTTAAATTCTAATGAAC+AGG - chr3_2:64239511-64239530 Msa0417160:CDS 20.0%
!! AGATGAATAAAGAAACTAAT+GGG - chr3_2:64239555-64239574 Msa0417160:CDS 20.0%
!! TTTAAATGAAAAGATGAAGA+AGG - chr3_2:64239733-64239752 Msa0417160:CDS 20.0%
!! TTTGCTTTGTAAAATTTCTT+CGG + chr3_2:64240452-64240471 None:intergenic 20.0%
!! TGTTATTCATGATTCATTAT+TGG - chr3_2:64240991-64241010 Msa0417160:CDS 20.0%
!! CTTTATTCTACATAAATAAC+AGG + chr3_2:64241033-64241052 None:intergenic 20.0%
!! TTTATTTATACAGGTACAAA+TGG + chr3_2:64241293-64241312 None:intergenic 20.0%
! AGTGAAAATTATCAATAGTC+TGG + chr3_2:64238280-64238299 None:intergenic 25.0%
! GCTATAATCTAATGAGTATT+AGG - chr3_2:64238329-64238348 Msa0417160:CDS 25.0%
!! TTTTTATGTGATGATCTAGT+TGG - chr3_2:64238401-64238420 Msa0417160:CDS 25.0%
! AATCTCAGCACAAAAATAAA+TGG + chr3_2:64238784-64238803 None:intergenic 25.0%
! ATATACCTCTAACATAAAGA+AGG - chr3_2:64238936-64238955 Msa0417160:CDS 25.0%
! AATTACCTTCTTTATGTTAG+AGG + chr3_2:64238944-64238963 None:intergenic 25.0%
! AAAGAGAATAAAAGATTTCC+AGG + chr3_2:64239185-64239204 None:intergenic 25.0%
!! TTTTGATATAAAGAAAGTGG+AGG - chr3_2:64239343-64239362 Msa0417160:CDS 25.0%
! TTAAATTCTAATGAACAGGT+TGG - chr3_2:64239515-64239534 Msa0417160:CDS 25.0%
! TTATTCATCTCCTTAATAAC+AGG + chr3_2:64239545-64239564 None:intergenic 25.0%
! GAGATGAATAAAGAAACTAA+TGG - chr3_2:64239554-64239573 Msa0417160:CDS 25.0%
!! ATCACCTGATATGATTTTAA+TGG - chr3_2:64239637-64239656 Msa0417160:CDS 25.0%
! AAGTCCATTAAAATCATATC+AGG + chr3_2:64239644-64239663 None:intergenic 25.0%
! TATTACTATGAATGAACTTG+AGG - chr3_2:64239688-64239707 Msa0417160:CDS 25.0%
!! TTGATAATCATGCAAATATG+AGG - chr3_2:64239879-64239898 Msa0417160:intron 25.0%
! AAATACGAGGAATTTCAATT+GGG - chr3_2:64240042-64240061 Msa0417160:intron 25.0%
! TATGTAGAATAAAGTATGTG+TGG - chr3_2:64241039-64241058 Msa0417160:CDS 25.0%
! TAGATTATGTTGTTCTCATT+GGG - chr3_2:64241151-64241170 Msa0417160:five_prime_UTR 25.0%
! TAGTCTGATTGTAAAATTGT+TGG - chr3_2:64241231-64241250 Msa0417160:five_prime_UTR 25.0%
!! CATTCACTGAGTTTTTAACT+CGG - chr3_2:64237834-64237853 Msa0417160:three_prime_UTR 30.0%
!! GTAGTAATAGAGTACTGAAA+TGG - chr3_2:64238307-64238326 Msa0417160:CDS 30.0%
!! TTGGATTAGTTTCTAGCTTA+TGG - chr3_2:64238420-64238439 Msa0417160:CDS 30.0%
! ACTATGCCTCAACATTTTAA+AGG + chr3_2:64238542-64238561 None:intergenic 30.0%
! TTTAAAATGTTGAGGCATAG+TGG - chr3_2:64238541-64238560 Msa0417160:CDS 30.0%
AGTTCGAGTCTTCTAAATTA+TGG + chr3_2:64238590-64238609 None:intergenic 30.0%
TTAGAGATGGTCAAGTTATA+TGG + chr3_2:64238873-64238892 None:intergenic 30.0%
TGCAATATCTGCAATGATTT+GGG - chr3_2:64238977-64238996 Msa0417160:CDS 30.0%
!! CAACTTCTTTAAGATGCTAA+CGG - chr3_2:64239081-64239100 Msa0417160:CDS 30.0%
TCAGCAAGTAAACTAACAAA+GGG + chr3_2:64239284-64239303 None:intergenic 30.0%
ATCAGCAAGTAAACTAACAA+AGG + chr3_2:64239285-64239304 None:intergenic 30.0%
! AGAATTTAAATCTGGAGTTG+CGG + chr3_2:64239504-64239523 None:intergenic 30.0%
AGTAATACCAAGATTCACTT+TGG + chr3_2:64239675-64239694 None:intergenic 30.0%
CAAATACGAGGAATTTCAAT+TGG - chr3_2:64240041-64240060 Msa0417160:intron 30.0%
!! GAAGATGTATATTCTGAAAC+TGG - chr3_2:64241112-64241131 Msa0417160:exon 30.0%
GTAGATTATGTTGTTCTCAT+TGG - chr3_2:64241150-64241169 Msa0417160:five_prime_UTR 30.0%
TTTACAATCAGACTAACCAA+TGG + chr3_2:64241226-64241245 None:intergenic 30.0%
GAAAAGGGTAAGCTTTCATT+TGG + chr3_2:64237793-64237812 None:intergenic 35.0%
TTCTCTTCTTTCCATGGAAA+TGG - chr3_2:64237977-64237996 Msa0417160:three_prime_UTR 35.0%
ACTCAACTGCCATAAGTATT+TGG - chr3_2:64238453-64238472 Msa0417160:CDS 35.0%
! CTTTAGGAAAATCCCTTGTA+AGG - chr3_2:64238483-64238502 Msa0417160:CDS 35.0%
TGTCATACTGAACTCTAGTT+AGG + chr3_2:64238709-64238728 None:intergenic 35.0%
GTGCAATATCTGCAATGATT+TGG - chr3_2:64238976-64238995 Msa0417160:CDS 35.0%
TCCTCTGATAGATACGATAA+TGG + chr3_2:64239050-64239069 None:intergenic 35.0%
TGATATCCTTTCAGAATCAG+AGG - chr3_2:64239136-64239155 Msa0417160:CDS 35.0%
GATATCCTTTCAGAATCAGA+GGG - chr3_2:64239137-64239156 Msa0417160:CDS 35.0%
ATCATACAGGGAAGTAAAAG+TGG + chr3_2:64239215-64239234 None:intergenic 35.0%
CAAGTAAACTAACAAAGGGA+AGG + chr3_2:64239280-64239299 None:intergenic 35.0%
AAACAAGCCAAAGTGAATCT+TGG - chr3_2:64239665-64239684 Msa0417160:CDS 35.0%
! GAAGAAGGAGAAAGTTTTTC+TGG - chr3_2:64239748-64239767 Msa0417160:CDS 35.0%
GAATTCACCATCATCTAATG+TGG - chr3_2:64239847-64239866 Msa0417160:intron 35.0%
GTGAATTCCACATTAGATGA+TGG + chr3_2:64239857-64239876 None:intergenic 35.0%
TGCTCTTGATACACAGATAA+AGG + chr3_2:64239968-64239987 None:intergenic 35.0%
! AATTCAACATGAGATGATGG+TGG + chr3_2:64240004-64240023 None:intergenic 35.0%
GTGAATTCAACATGAGATGA+TGG + chr3_2:64240007-64240026 None:intergenic 35.0%
! TTGATAATCCTGCAAATACG+AGG - chr3_2:64240029-64240048 Msa0417160:intron 35.0%
TTGAAATTCCTCGTATTTGC+AGG + chr3_2:64240040-64240059 None:intergenic 35.0%
TATTGCTCTTGCTGAAATCA+AGG - chr3_2:64240219-64240238 Msa0417160:intron 35.0%
AGAGATCATTTGAATTCGCT+CGG - chr3_2:64240257-64240276 Msa0417160:intron 35.0%
CGAATCTATTACCTTCTTCA+GGG + chr3_2:64240365-64240384 None:intergenic 35.0%
TCGAATCTATTACCTTCTTC+AGG + chr3_2:64240366-64240385 None:intergenic 35.0%
!! GCTGACTATTTTGAAAAAGC+TGG - chr3_2:64240417-64240436 Msa0417160:intron 35.0%
!! GACTATTTTGAAAAAGCTGG+AGG - chr3_2:64240420-64240439 Msa0417160:intron 35.0%
ATAGAAAACAACATGCTGCT+AGG - chr3_2:64240512-64240531 Msa0417160:intron 35.0%
TAGAAAACAACATGCTGCTA+GGG - chr3_2:64240513-64240532 Msa0417160:intron 35.0%
!!! ATTTTTTCCTGTTGTTGACC+TGG + chr3_2:64240659-64240678 None:intergenic 35.0%
ATAATCAAAAGCCTGTTTCG+AGG - chr3_2:64240677-64240696 Msa0417160:intron 35.0%
ACATCTCTCATTGAAGTTGT+TGG + chr3_2:64240703-64240722 None:intergenic 35.0%
ATCACTCTCATGATCTTTCT+CGG + chr3_2:64240857-64240876 None:intergenic 35.0%
TAGTCATAGGGAGTGATATA+TGG + chr3_2:64240921-64240940 None:intergenic 35.0%
ATATATCACTCCCTATGACT+AGG - chr3_2:64240920-64240939 Msa0417160:intron 35.0%
! TGTCATGTCCTTTTCTTACT+AGG + chr3_2:64240946-64240965 None:intergenic 35.0%
!!! ATTCTGAAACTGGCTTTTTG+TGG - chr3_2:64241122-64241141 Msa0417160:exon 35.0%
TGCTGTGTTTATTCTCTACA+GGG - chr3_2:64241187-64241206 Msa0417160:five_prime_UTR 35.0%
TGTTTATTCTCTACAGGGTA+TGG - chr3_2:64241192-64241211 Msa0417160:five_prime_UTR 35.0%
! TGTATGAGTGTGTGCTTTTC+TGG + chr3_2:64237770-64237789 None:intergenic 40.0%
GCTTGCATAAATTCCACCAA+TGG - chr3_2:64237877-64237896 Msa0417160:three_prime_UTR 40.0%
TCGGAAAGAGTGATGAAGAT+TGG + chr3_2:64237918-64237937 None:intergenic 40.0%
CGAACTTTCTCTTCTTTCCA+TGG - chr3_2:64237971-64237990 Msa0417160:three_prime_UTR 40.0%
TCTTCTTTCCATGGAAATGG+CGG - chr3_2:64237980-64237999 Msa0417160:three_prime_UTR 40.0%
!! AGGGAGCCTTTAAAATGTTG+AGG - chr3_2:64238533-64238552 Msa0417160:CDS 40.0%
GTATTGTCCACAAGCTCAAA+AGG + chr3_2:64238750-64238769 None:intergenic 40.0%
GCCATTATCGTATCTATCAG+AGG - chr3_2:64239046-64239065 Msa0417160:CDS 40.0%
AGATGCTAACGGCTATTTAG+AGG - chr3_2:64239092-64239111 Msa0417160:CDS 40.0%
GATGCTAACGGCTATTTAGA+GGG - chr3_2:64239093-64239112 Msa0417160:CDS 40.0%
TAACGGCTATTTAGAGGGAT+TGG - chr3_2:64239098-64239117 Msa0417160:CDS 40.0%
ATTTCCAGGACAAATGCGAA+TGG + chr3_2:64239171-64239190 None:intergenic 40.0%
AAGAACTAGGTGCAACCAAA+AGG - chr3_2:64239429-64239448 Msa0417160:CDS 40.0%
! TAAGTCCTCCACAATCCTTT+TGG + chr3_2:64239447-64239466 None:intergenic 40.0%
GGTTGGAACTCCTGTTATTA+AGG - chr3_2:64239532-64239551 Msa0417160:CDS 40.0%
GATGACATAGAGCATGAACT+TGG + chr3_2:64239620-64239639 None:intergenic 40.0%
TTCTGAGCAGCACAATAGAA+TGG - chr3_2:64239916-64239935 Msa0417160:intron 40.0%
TGCTCGTCATACACAGATAA+GGG + chr3_2:64240121-64240140 None:intergenic 40.0%
! TGCAGCTTCTTCCATCTTTT+TGG + chr3_2:64240185-64240204 None:intergenic 40.0%
AAAGATGGAAGAAGCTGCAA+AGG - chr3_2:64240186-64240205 Msa0417160:intron 40.0%
AAAGCAAAAGTGACTTTCCG+AGG + chr3_2:64240289-64240308 None:intergenic 40.0%
TTCTTCAGGGTTGAATCATC+AGG + chr3_2:64240352-64240371 None:intergenic 40.0%
TGATGATTCAACCCTGAAGA+AGG - chr3_2:64240351-64240370 Msa0417160:intron 40.0%
CTTCTTTACCAGATGTAACC+AGG - chr3_2:64240638-64240657 Msa0417160:intron 40.0%
TTTCTTGCAGCATATCCTTC+AGG + chr3_2:64240745-64240764 None:intergenic 40.0%
TGAAGGATATGCTGCAAGAA+AGG - chr3_2:64240744-64240763 Msa0417160:intron 40.0%
ATATGCTGCAAGAAAGGAGA+TGG - chr3_2:64240750-64240769 Msa0417160:intron 40.0%
! AGATGGAAGAGCATACTGAA+AGG - chr3_2:64240767-64240786 Msa0417160:intron 40.0%
! TTTCTCGGCTTTTGGTGAAA+GGG + chr3_2:64240842-64240861 None:intergenic 40.0%
! TCATGATCTTTCTCGGCTTT+TGG + chr3_2:64240850-64240869 None:intergenic 40.0%
ATGAACCCAAACTTCTTCCT+CGG + chr3_2:64240898-64240917 None:intergenic 40.0%
TCTTACTAGGCCTAGTCATA+GGG + chr3_2:64240933-64240952 None:intergenic 40.0%
TTCTTACTAGGCCTAGTCAT+AGG + chr3_2:64240934-64240953 None:intergenic 40.0%
TGACTAGGCCTAGTAAGAAA+AGG - chr3_2:64240935-64240954 Msa0417160:intron 40.0%
TAAAGTATGTGTGGTGTGAC+TGG - chr3_2:64241048-64241067 Msa0417160:CDS 40.0%
GTGCTGTGTTTATTCTCTAC+AGG - chr3_2:64241186-64241205 Msa0417160:five_prime_UTR 40.0%
TTATTCTCTACAGGGTATGG+AGG - chr3_2:64241195-64241214 Msa0417160:five_prime_UTR 40.0%
CAGGTACAAATGGTAACCAA+TGG + chr3_2:64241283-64241302 None:intergenic 40.0%
! ATGAGTGTGTGCTTTTCTGG+TGG + chr3_2:64237767-64237786 None:intergenic 45.0%
TGATGAAGATTGGAGTCTCG+AGG + chr3_2:64237908-64237927 None:intergenic 45.0%
AAGGAAGCTGTGACTCGTTT+CGG - chr3_2:64238095-64238114 Msa0417160:three_prime_UTR 45.0%
GACCTTGGATTCCTCTTTAC+AGG - chr3_2:64238126-64238145 Msa0417160:three_prime_UTR 45.0%
AGCCTGTAAAGAGGAATCCA+AGG + chr3_2:64238131-64238150 None:intergenic 45.0%
TGGATTCCTCTTTACAGGCT+TGG - chr3_2:64238131-64238150 Msa0417160:three_prime_UTR 45.0%
!! CTTATGGCAGTTGAGTTGAG+AGG + chr3_2:64238449-64238468 None:intergenic 45.0%
CGAACTCATTGCAGATACGT+AGG - chr3_2:64238604-64238623 Msa0417160:CDS 45.0%
AATCGATCTCTAGTCCACCA+AGG - chr3_2:64238836-64238855 Msa0417160:CDS 45.0%
ATATGGTATCAGATCCGCCT+TGG + chr3_2:64238856-64238875 None:intergenic 45.0%
GCAATCCCTCTGATTCTGAA+AGG + chr3_2:64239145-64239164 None:intergenic 45.0%
AGGTGCAACCAAAAGGATTG+TGG - chr3_2:64239436-64239455 Msa0417160:CDS 45.0%
TGCAACCAAAAGGATTGTGG+AGG - chr3_2:64239439-64239458 Msa0417160:CDS 45.0%
CTGTGTATCAAGAGCAAGCA+AGG - chr3_2:64239972-64239991 Msa0417160:intron 45.0%
GTGCTCGTCATACACAGATA+AGG + chr3_2:64240122-64240141 None:intergenic 45.0%
GCTGAAATCAAGGCTCTATC+TGG - chr3_2:64240229-64240248 Msa0417160:intron 45.0%
AAAGTGACTTTCCGAGGTTC+AGG + chr3_2:64240283-64240302 None:intergenic 45.0%
AAACTCTCCTCTAAACCCCA+AGG - chr3_2:64240315-64240334 Msa0417160:intron 45.0%
! ATCATAGCCTTGGGGTTTAG+AGG + chr3_2:64240325-64240344 None:intergenic 45.0%
TCAGGCATCATCATAGCCTT+GGG + chr3_2:64240334-64240353 None:intergenic 45.0%
ATCAGGCATCATCATAGCCT+TGG + chr3_2:64240335-64240354 None:intergenic 45.0%
! GATACCGGAGGTTGATCTAA+GGG - chr3_2:64240552-64240571 Msa0417160:intron 45.0%
TTCTCCCTTAGATCAACCTC+CGG + chr3_2:64240559-64240578 None:intergenic 45.0%
GTTGTTGACCTGGTTACATC+TGG + chr3_2:64240649-64240668 None:intergenic 45.0%
GATGTAACCAGGTCAACAAC+AGG - chr3_2:64240649-64240668 Msa0417160:intron 45.0%
AGCAGAAAGCAAGTTCCTGA+AGG - chr3_2:64240727-64240746 Msa0417160:intron 45.0%
AGAGCATACTGAAAGGCGAA+AGG - chr3_2:64240774-64240793 Msa0417160:intron 45.0%
! CTTTCTCGGCTTTTGGTGAA+AGG + chr3_2:64240843-64240862 None:intergenic 45.0%
TCTCATTGGGTGCATTAGAG+TGG - chr3_2:64241164-64241183 Msa0417160:five_prime_UTR 45.0%
!! AAATATAAATTTATTTATAC+AGG + chr3_2:64241302-64241321 None:intergenic 5.0%
! AAGCGTGATGATGATGTCGC+GGG + chr3_2:64237861-64237880 None:intergenic 50.0%
! CAAGCGTGATGATGATGTCG+CGG + chr3_2:64237862-64237881 None:intergenic 50.0%
TCTCGAGGAAGATCCATTGG+TGG + chr3_2:64237893-64237912 None:intergenic 50.0%
GAGTCTCGAGGAAGATCCAT+TGG + chr3_2:64237896-64237915 None:intergenic 50.0%
! CGCGTGTTTCAGAGAAGCAT+CGG + chr3_2:64237937-64237956 None:intergenic 50.0%
TACATCGCCTCCGTTCGAAT+CGG - chr3_2:64238070-64238089 Msa0417160:three_prime_UTR 50.0%
!! GCTTCCTTGACCGATTCGAA+CGG + chr3_2:64238083-64238102 None:intergenic 50.0%
! GCAAGAGCCTTTTGAGCTTG+TGG - chr3_2:64238740-64238759 Msa0417160:CDS 50.0%
CACTCCATTCGCATTTGTCC+TGG - chr3_2:64239164-64239183 Msa0417160:CDS 50.0%
! ACAAGCAGCTGAGTTGGAGA+AGG - chr3_2:64239367-64239386 Msa0417160:CDS 50.0%
CTTGACGTGCTCGAAGAACT+AGG - chr3_2:64239416-64239435 Msa0417160:CDS 50.0%
AGCTGTGTCTGCTCAAGAGA+AGG - chr3_2:64239805-64239824 Msa0417160:intron 50.0%
! GTGGCTTGCAGCCAAAAAGA+TGG - chr3_2:64240171-64240190 Msa0417160:intron 50.0%
! CAGGCATCATCATAGCCTTG+GGG + chr3_2:64240333-64240352 None:intergenic 50.0%
AGCTCTGCGGATATGGATAC+CGG - chr3_2:64240537-64240556 Msa0417160:intron 50.0%
! GGATACCGGAGGTTGATCTA+AGG - chr3_2:64240551-64240570 Msa0417160:intron 50.0%
! GAAGTTGTTGGCCTCGAAAC+AGG + chr3_2:64240691-64240710 None:intergenic 50.0%
!! CCAAATGCTTCGAGCACTGA+GGG - chr3_2:64240807-64240826 Msa0417160:intron 50.0%
GAGTGATCAAAAGCAGCCTG+TGG - chr3_2:64240870-64240889 Msa0417160:intron 50.0%
! TGGCACCGAGGAAGAAGTTT+GGG - chr3_2:64240890-64240909 Msa0417160:intron 50.0%
GGGTATGGAGGTCTTACCAT+TGG - chr3_2:64241207-64241226 Msa0417160:five_prime_UTR 50.0%
GCGAGTTTCCGCCATTTCCA+TGG + chr3_2:64237991-64238010 None:intergenic 55.0%
CCTAATTCCGCTTCCCGTCT+CGG + chr3_2:64238024-64238043 None:intergenic 55.0%
GACGGGAAGCGGAATTAGGA+AGG - chr3_2:64238025-64238044 Msa0417160:three_prime_UTR 55.0%
!! TCCTTGACCGATTCGAACGG+AGG + chr3_2:64238080-64238099 None:intergenic 55.0%
GAAGCTGTGACTCGTTTCGG+TGG - chr3_2:64238098-64238117 Msa0417160:three_prime_UTR 55.0%
GTGACTCGTTTCGGTGGAAG+TGG - chr3_2:64238104-64238123 Msa0417160:three_prime_UTR 55.0%
GTTTCGGTGGAAGTGGACCT+TGG - chr3_2:64238111-64238130 Msa0417160:three_prime_UTR 55.0%
GCTTCGCCAAGCCTGTAAAG+AGG + chr3_2:64238140-64238159 None:intergenic 55.0%
CGATCTCTAGTCCACCAAGG+CGG - chr3_2:64238839-64238858 Msa0417160:CDS 55.0%
TGGTATCAGATCCGCCTTGG+TGG + chr3_2:64238853-64238872 None:intergenic 55.0%
GGAGGAACAAGCAGCTGAGT+TGG - chr3_2:64239361-64239380 Msa0417160:CDS 55.0%
GTGTTAAGACCGCCGAGATG+AGG - chr3_2:64240149-64240168 Msa0417160:intron 55.0%
TTAAGACCGCCGAGATGAGG+TGG - chr3_2:64240152-64240171 Msa0417160:intron 55.0%
AATTCGCTCGGCCTGAACCT+CGG - chr3_2:64240269-64240288 Msa0417160:intron 55.0%
ATGCTGCTAGGGAAGCTCTG+CGG - chr3_2:64240524-64240543 Msa0417160:intron 55.0%
CTAGGGAAGCTCTGCGGATA+TGG - chr3_2:64240530-64240549 Msa0417160:intron 55.0%
TCTGCGGATATGGATACCGG+AGG - chr3_2:64240540-64240559 Msa0417160:intron 55.0%
! GCCAAATGCTTCGAGCACTG+AGG - chr3_2:64240806-64240825 Msa0417160:intron 55.0%
! CCCTCAGTGCTCGAAGCATT+TGG + chr3_2:64240810-64240829 None:intergenic 55.0%
!! AACTTCTTCCTCGGTGCCAC+AGG + chr3_2:64240889-64240908 None:intergenic 55.0%
! GTGGCACCGAGGAAGAAGTT+TGG - chr3_2:64240889-64240908 Msa0417160:intron 55.0%
! ATGGCGGAAACTCGCGATGC+CGG - chr3_2:64237996-64238015 Msa0417160:three_prime_UTR 60.0%
CCGAGACGGGAAGCGGAATT+AGG - chr3_2:64238021-64238040 Msa0417160:three_prime_UTR 60.0%
GCCTCCGTTCGAATCGGTCA+AGG - chr3_2:64238076-64238095 Msa0417160:three_prime_UTR 60.0%
TGCAAGCCACCTCATCTCGG+CGG + chr3_2:64240161-64240180 None:intergenic 60.0%
GGCTGCAAGCCACCTCATCT+CGG + chr3_2:64240164-64240183 None:intergenic 60.0%
AAAAGCAGCCTGTGGCACCG+AGG - chr3_2:64240878-64240897 Msa0417160:intron 60.0%
! TCGCGATGCCGGCGCCGAGA+CGG - chr3_2:64238007-64238026 Msa0417160:three_prime_UTR 75.0%
TCCGCTTCCCGTCTCGGCGC+CGG + chr3_2:64238018-64238037 None:intergenic 75.0%
!! CGCGATGCCGGCGCCGAGAC+GGG - chr3_2:64238008-64238027 Msa0417160:three_prime_UTR 80.0%
!! GCCGGCGCCGAGACGGGAAG+CGG - chr3_2:64238014-64238033 Msa0417160:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 64237760 64241354 64237760 ID=Msa0417160;Name=Msa0417160
chr3_2 mRNA 64237760 64241354 64237760 ID=Msa0417160-mRNA-1;Parent=Msa0417160;Name=Msa0417160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=230|1|1|1|1|1|2|391|602
chr3_2 exon 64237760 64239785 64237760 ID=Msa0417160-mRNA-1:exon:14189;Parent=Msa0417160-mRNA-1
chr3_2 exon 64240951 64241354 64240951 ID=Msa0417160-mRNA-1:exon:14188;Parent=Msa0417160-mRNA-1
chr3_2 five_prime_UTR 64241125 64241354 64241125 ID=Msa0417160-mRNA-1:five_prime_utr;Parent=Msa0417160-mRNA-1
chr3_2 CDS 64240951 64241124 64240951 ID=Msa0417160-mRNA-1:cds;Parent=Msa0417160-mRNA-1
chr3_2 CDS 64238151 64239785 64238151 ID=Msa0417160-mRNA-1:cds;Parent=Msa0417160-mRNA-1
chr3_2 three_prime_UTR 64237760 64238150 64237760 ID=Msa0417160-mRNA-1:three_prime_utr;Parent=Msa0417160-mRNA-1
Gene Sequence

>Msa0417160

ATGGAAATGGCGGAAACTCGCGATGCCGGCGCCGAGACGGGAAGCGGAATTAGGAAGGTGAATTATCGAGCTGAGATTGATACATCGCCTCCGTTCGAATCGGTCAAGGAAGCTGTGACTCGTTTCGGTGGAAGTGGACCTTGGATTCCTCTTTACAGGCTTGGCGAAGCTTTTAACAACTTTGAAGATTTTGATATAAAGAAAGTGGAGGAACAAGCAGCTGAGTTGGAGAAGGATTTGATTGTCAAAGAACTTGAAACACTTGACGTGCTCGAAGAACTAGGTGCAACCAAAAGGATTGTGGAGGACTTAAAGCAGCAGCTACAAAAAGAAGCATTGAAATTATCCGCAACTCCAGATTTAAATTCTAATGAACAGGTTGGAACTCCTGTTATTAAGGAGATGAATAAAGAAACTAATGGGAATAATGTCAACAACAATCAAGAACAGACATTGCATATTCCAAGTTCATGCTCTATGTCATCACCTGATATGATTTTAATGGACTTGAAACAAGCCAAAGTGAATCTTGGTATTACTATGAATGAACTTGAGGCGATACAATCGTCTGTTGAATCTTTAAATGAAAAGATGAAGAAGGAGAAAGTTTTTCTGGAGAAGACACGTGAAAAGCTAGCGTCAAAGTTTGCAGCTGTGTCTGCTCAAGAGAAGGAACAAGATCAAGCAAGATTGAATTCACCATCATCTAATGTGGAATTCACTTTTGATAATCATGCAAATATGAGGAATTTCAATTGTGATTCTGAGCAGCACAATAGAATGGTTGAGACAAGATCTGAAGTTTCAAAGCCTTTATCTGTGTATCAAGAGCAAGCAAGGTTGAGTCCACCATCATCTCATGTTGAATTCACTTTTGATAATCCTGCAAATACGAGGAATTTCAATTGGGATTATGAGCAGCACAATAGAATAGTTGAGACAAGAAGATCTGAAGATTCAAATCCCTTATCTGTGTATGACGAGCACAGTTTTAGTGTTAAGACCGCCGAGATGAGGTGGCTTGCAGCCAAAAAGATGGAAGAAGCTGCAAAGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTGGCGCTGAGAGATCATTTGAATTCGCTCGGCCTGAACCTCGGAAAGTCACTTTTGCTTTAGCAGAAAACTCTCCTCTAAACCCCAAGGCTATGATGATGCCTGATGATTCAACCCTGAAGAAGGTAATAGATTCGAAGTTTCAAATTGATGAAACAAATATTTCTAAGCTGACTATTTTGAAAAAGCTGGAGGAAGCGTCCGAAGAAATTTTACAAAGCAAACAAGTCTTAACTGATGCTTTAAACAGAATTGAATCTGCAAATAGAAAACAACATGCTGCTAGGGAAGCTCTGCGGATATGGATACCGGAGGTTGATCTAAGGGAGAAAGCAGTGTATAACTCTTTTAACTTTGACAAATTTAATCAAGCTAGAATTCGTCGAGATTCTTCTTTACCAGATGTAACCAGGTCAACAACAGGAAAAAATAATCAAAAGCCTGTTTCGAGGCCAACAACTTCAATGAGAGATGTACTTAGCAGAAAGCAAGTTCCTGAAGGATATGCTGCAAGAAAGGAGATGGAAGAGCATACTGAAAGGCGAAAGGTAGCATTGAGCCAAATGCTTCGAGCACTGAGGGAAGATCTAACCCTTTCACCAAAAGCCGAGAAAGATCATGAGAGTGATCAAAAGCAGCCTGTGGCACCGAGGAAGAAGTTTGGGTTCATCCATATATCACTCCCTATGACTAGGCCTAGTAAGAAAAGGACATGA
Protein sequence

>Msa0417160

MEMAETRDAGAETGSGIRKVNYRAEIDTSPPFESVKEAVTRFGGSGPWIPLYRLGEAFNNFEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALKLSATPDLNSNEQVGTPVIKEMNKETNGNNVNNNQEQTLHIPSSCSMSSPDMILMDLKQAKVNLGITMNELEAIQSSVESLNEKMKKEKVFLEKTREKLASKFAAVSAQEKEQDQARLNSPSSNVEFTFDNHANMRNFNCDSEQHNRMVETRSEVSKPLSVYQEQARLSPPSSHVEFTFDNPANTRNFNWDYEQHNRIVETRRSEDSNPLSVYDEHSFSVKTAEMRWLAAKKMEEAAKAAEAIALAEIKALSGAERSFEFARPEPRKVTFALAENSPLNPKAMMMPDDSTLKKVIDSKFQIDETNISKLTILKKLEEASEEILQSKQVLTDALNRIESANRKQHAAREALRIWIPEVDLREKAVYNSFNFDKFNQARIRRDSSLPDVTRSTTGKNNQKPVSRPTTSMRDVLSRKQVPEGYAARKEMEEHTERRKVALSQMLRALREDLTLSPKAEKDHESDQKQPVAPRKKFGFIHISLPMTRPSKKRT*