Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756270 | sp|O82333|GH31_ARATH | 75.041 | 605 | 132 | 4 | 1 | 602 | 1 | 589 | 0.0 | 947 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756270 | G7K574 | 96.512 | 602 | 19 | 1 | 1 | 602 | 1 | 600 | 0.0 | 1200 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0756270 | Msa0835780 | 0.933510 | 1.681413e-95 | -8.615850e-47 |
| Msa0756270 | Msa1335520 | 0.935691 | 5.687917e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756270 | MtrunA17_Chr5g0401641 | 96.512 | 602 | 19 | 1 | 1 | 602 | 1 | 600 | 0.0 | 1200 |
| Msa0756270 | MtrunA17_Chr5g0421331 | 77.483 | 604 | 118 | 4 | 1 | 602 | 1 | 588 | 0.0 | 959 |
| Msa0756270 | MtrunA17_Chr8g0361551 | 63.311 | 586 | 206 | 3 | 24 | 602 | 18 | 601 | 0.0 | 787 |
| Msa0756270 | MtrunA17_Chr2g0318991 | 59.867 | 603 | 229 | 3 | 12 | 602 | 2 | 603 | 0.0 | 759 |
| Msa0756270 | MtrunA17_Chr5g0401631 | 88.491 | 391 | 34 | 1 | 210 | 600 | 1 | 380 | 0.0 | 728 |
| Msa0756270 | MtrunA17_Chr4g0023301 | 58.974 | 507 | 203 | 3 | 97 | 602 | 1 | 503 | 0.0 | 641 |
| Msa0756270 | MtrunA17_Chr1g0195771 | 53.425 | 584 | 264 | 6 | 23 | 598 | 56 | 639 | 0.0 | 632 |
| Msa0756270 | MtrunA17_Chr7g0275471 | 39.451 | 583 | 340 | 7 | 15 | 593 | 5 | 578 | 5.56e-145 | 432 |
| Msa0756270 | MtrunA17_Chr8g0347381 | 37.285 | 582 | 348 | 7 | 15 | 592 | 5 | 573 | 3.23e-141 | 422 |
| Msa0756270 | MtrunA17_Chr8g0347391 | 37.113 | 582 | 349 | 7 | 15 | 592 | 12 | 580 | 1.56e-136 | 410 |
| Msa0756270 | MtrunA17_Chr8g0347421 | 37.258 | 569 | 342 | 5 | 20 | 585 | 10 | 566 | 3.51e-136 | 409 |
| Msa0756270 | MtrunA17_Chr8g0347431 | 41.000 | 400 | 222 | 4 | 196 | 592 | 11 | 399 | 1.39e-108 | 332 |
| Msa0756270 | MtrunA17_Chr5g0401621 | 89.773 | 176 | 18 | 0 | 1 | 176 | 1 | 176 | 1.75e-108 | 323 |
| Msa0756270 | MtrunA17_Chr7g0259291 | 30.366 | 573 | 373 | 12 | 24 | 581 | 8 | 569 | 1.22e-79 | 262 |
| Msa0756270 | MtrunA17_Chr4g0022401 | 31.095 | 402 | 267 | 2 | 22 | 413 | 20 | 421 | 3.59e-68 | 228 |
| Msa0756270 | MtrunA17_Chr8g0352391 | 32.110 | 327 | 162 | 8 | 271 | 593 | 1 | 271 | 7.01e-50 | 174 |
| Msa0756270 | MtrunA17_Chr1g0169871 | 43.529 | 170 | 94 | 1 | 327 | 496 | 138 | 305 | 1.68e-43 | 159 |
| Msa0756270 | MtrunA17_Chr4g0022391 | 37.356 | 174 | 102 | 3 | 413 | 585 | 11 | 178 | 8.79e-38 | 138 |
| Msa0756270 | MtrunA17_Chr7g0259401 | 30.216 | 278 | 160 | 6 | 145 | 420 | 4 | 249 | 1.71e-31 | 122 |
| Msa0756270 | MtrunA17_Chr4g0023291 | 64.368 | 87 | 31 | 0 | 23 | 109 | 32 | 118 | 1.25e-29 | 113 |
| Msa0756270 | MtrunA17_Chr8g0347441 | 46.535 | 101 | 54 | 0 | 20 | 120 | 10 | 110 | 1.56e-23 | 96.7 |
| Msa0756270 | MtrunA17_Chr8g0352401 | 39.604 | 101 | 61 | 0 | 20 | 120 | 1 | 101 | 3.05e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0756270 | AT2G14960.1 | 75.041 | 605 | 132 | 4 | 1 | 602 | 1 | 589 | 0.0 | 947 |
| Msa0756270 | AT2G23170.1 | 74.794 | 607 | 136 | 5 | 1 | 602 | 1 | 595 | 0.0 | 931 |
| Msa0756270 | AT4G37390.1 | 74.172 | 604 | 153 | 3 | 1 | 602 | 1 | 603 | 0.0 | 923 |
| Msa0756270 | AT1G59500.1 | 69.652 | 603 | 174 | 4 | 1 | 601 | 1 | 596 | 0.0 | 853 |
| Msa0756270 | AT5G54510.1 | 64.262 | 596 | 203 | 5 | 14 | 602 | 16 | 608 | 0.0 | 801 |
| Msa0756270 | AT4G27260.1 | 64.034 | 595 | 206 | 4 | 14 | 602 | 16 | 608 | 0.0 | 801 |
| Msa0756270 | AT1G28130.1 | 53.156 | 602 | 264 | 6 | 14 | 598 | 4 | 604 | 0.0 | 659 |
| Msa0756270 | AT2G47750.1 | 50.000 | 584 | 279 | 8 | 21 | 598 | 9 | 585 | 0.0 | 588 |
| Msa0756270 | AT1G23160.1 | 47.611 | 586 | 286 | 6 | 13 | 590 | 5 | 577 | 0.0 | 558 |
| Msa0756270 | AT5G13320.3 | 46.235 | 571 | 289 | 4 | 27 | 590 | 15 | 574 | 0.0 | 543 |
| Msa0756270 | AT5G13320.1 | 46.235 | 571 | 289 | 4 | 27 | 590 | 15 | 574 | 0.0 | 543 |
| Msa0756270 | AT5G13320.2 | 46.235 | 571 | 289 | 4 | 27 | 590 | 30 | 589 | 0.0 | 542 |
| Msa0756270 | AT5G13370.1 | 46.220 | 582 | 297 | 7 | 23 | 596 | 13 | 586 | 0.0 | 536 |
| Msa0756270 | AT5G13360.1 | 46.724 | 580 | 296 | 6 | 23 | 596 | 13 | 585 | 0.0 | 525 |
| Msa0756270 | AT5G13360.2 | 46.724 | 580 | 296 | 6 | 23 | 596 | 13 | 585 | 0.0 | 525 |
| Msa0756270 | AT1G28130.2 | 54.881 | 461 | 193 | 4 | 153 | 598 | 1 | 461 | 0.0 | 520 |
| Msa0756270 | AT5G13360.3 | 46.141 | 596 | 305 | 7 | 7 | 596 | 78 | 663 | 3.24e-180 | 525 |
| Msa0756270 | AT5G13380.1 | 46.048 | 582 | 297 | 7 | 23 | 596 | 43 | 615 | 1.10e-176 | 514 |
| Msa0756270 | AT1G48660.2 | 43.546 | 581 | 313 | 5 | 19 | 594 | 2 | 572 | 3.76e-173 | 504 |
| Msa0756270 | AT5G13350.1 | 44.103 | 585 | 305 | 8 | 23 | 596 | 13 | 586 | 8.81e-173 | 503 |
| Msa0756270 | AT5G13350.2 | 44.103 | 585 | 305 | 8 | 23 | 596 | 13 | 586 | 8.81e-173 | 503 |
| Msa0756270 | AT1G48660.1 | 43.696 | 579 | 312 | 5 | 19 | 594 | 2 | 569 | 2.25e-172 | 502 |
| Msa0756270 | AT5G51470.1 | 43.585 | 569 | 307 | 4 | 25 | 590 | 14 | 571 | 1.46e-166 | 487 |
| Msa0756270 | AT1G48670.1 | 40.734 | 572 | 274 | 6 | 27 | 594 | 11 | 521 | 1.05e-147 | 437 |
| Msa0756270 | AT2G46370.4 | 38.462 | 585 | 340 | 8 | 15 | 593 | 16 | 586 | 1.70e-138 | 416 |
| Msa0756270 | AT2G46370.1 | 38.462 | 585 | 340 | 8 | 15 | 593 | 5 | 575 | 1.95e-138 | 415 |
| Msa0756270 | AT2G46370.2 | 38.462 | 585 | 340 | 8 | 15 | 593 | 5 | 575 | 1.95e-138 | 415 |
| Msa0756270 | AT5G51470.2 | 42.536 | 489 | 268 | 3 | 105 | 590 | 3 | 481 | 8.10e-137 | 408 |
| Msa0756270 | AT1G48670.2 | 46.172 | 418 | 213 | 3 | 180 | 594 | 2 | 410 | 2.03e-131 | 391 |
| Msa0756270 | AT2G46370.3 | 37.843 | 510 | 299 | 6 | 88 | 593 | 1 | 496 | 1.69e-120 | 366 |
| Msa0756270 | AT4G03400.2 | 32.762 | 583 | 373 | 6 | 17 | 585 | 5 | 582 | 4.56e-117 | 360 |
| Msa0756270 | AT4G03400.1 | 32.762 | 583 | 373 | 6 | 17 | 585 | 5 | 582 | 4.56e-117 | 360 |
| Msa0756270 | AT1G48690.1 | 39.378 | 193 | 113 | 2 | 19 | 211 | 2 | 190 | 5.61e-39 | 142 |
Find 130 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTAAGTATGTGTAATT+TGG | 0.150925 | 5_2:-10410541 | Msa0756270:three_prime_UTR |
| GGGATCCGGTTTAAGTATTT+TGG | 0.153404 | 5_2:+10411717 | None:intergenic |
| GCTTCATCTGAATGTTATTT+TGG | 0.191327 | 5_2:-10411520 | Msa0756270:CDS |
| CTGGACATTATGTTATCTAT+TGG | 0.236480 | 5_2:-10411072 | Msa0756270:CDS |
| CTTATAATCACAACTTATTC+AGG | 0.253897 | 5_2:-10411319 | Msa0756270:CDS |
| ATCCTTCAACGACGTCGTTC+TGG | 0.275444 | 5_2:+10410740 | None:intergenic |
| TTAGGTTCCTTCAGCTCAAC+TGG | 0.281934 | 5_2:-10411816 | Msa0756270:CDS |
| GCATACATTGTACATGGTTT+TGG | 0.286159 | 5_2:+10411541 | None:intergenic |
| CAACAGATATGTTCCTGATT+TGG | 0.286352 | 5_2:-10412112 | Msa0756270:intron |
| GAGTCAAGAAGTTCCATTAT+AGG | 0.293990 | 5_2:+10410809 | None:intergenic |
| ACTTCATTTGGTTCTGTCAT+AGG | 0.297603 | 5_2:+10411484 | None:intergenic |
| TGTTGAATCTGAAATCCTTT+TGG | 0.297924 | 5_2:-10412792 | Msa0756270:CDS |
| TGATTAAGTATGTGTAATTT+GGG | 0.299108 | 5_2:-10410540 | Msa0756270:three_prime_UTR |
| TGGACATTATGTTATCTATT+GGG | 0.303558 | 5_2:-10411071 | Msa0756270:CDS |
| TTCGCCTGACGAATTTGAAT+TGG | 0.319624 | 5_2:+10411236 | None:intergenic |
| TCGCCTGACGAATTTGAATT+GGG | 0.323371 | 5_2:+10411237 | None:intergenic |
| TTTGTGTTAGGCCAGATTCT+TGG | 0.325164 | 5_2:+10411637 | None:intergenic |
| ACTGAGTACTTGAAACGATT+TGG | 0.330070 | 5_2:-10412644 | Msa0756270:CDS |
| TTAGCAATGCGTTGAATATC+AGG | 0.337815 | 5_2:+10412551 | None:intergenic |
| CCGGGCTTCTCCGAGCCATT+AGG | 0.338420 | 5_2:-10411834 | Msa0756270:CDS |
| GGACTTGTTAACACATTGTA+AGG | 0.342995 | 5_2:+10411964 | None:intergenic |
| GTAACCCATGTTTGGCATAA+TGG | 0.346043 | 5_2:+10411453 | None:intergenic |
| GACATGCACTGTTTGATAGA+AGG | 0.351174 | 5_2:+10411739 | None:intergenic |
| TTGTGTTAGGCCAGATTCTT+GGG | 0.352673 | 5_2:+10411638 | None:intergenic |
| CGTGAGTTTCACTCCTATAA+TGG | 0.353049 | 5_2:-10410822 | Msa0756270:CDS |
| GAGTCACGTGAGAGGGTTAT+AGG | 0.358227 | 5_2:+10411394 | None:intergenic |
| GAATCAATGTTGTTTGGTTA+TGG | 0.360826 | 5_2:-10411002 | Msa0756270:CDS |
| AAGAATGTTCAGGAGACAAT+TGG | 0.367565 | 5_2:-10411672 | Msa0756270:CDS |
| TTGAAACGATTTGGACTTAA+CGG | 0.369319 | 5_2:-10412635 | Msa0756270:CDS |
| TTTGTTACAAAAGAATGTTC+AGG | 0.371323 | 5_2:-10411682 | Msa0756270:CDS |
| TTCACCACACGTATCTCTAA+TGG | 0.376428 | 5_2:+10410923 | None:intergenic |
| TGGCACGTTTGAGGAACTAA+TGG | 0.378498 | 5_2:-10410897 | Msa0756270:CDS |
| TTATCAAAGCCGAAACAAAA+AGG | 0.380489 | 5_2:+10410446 | None:intergenic |
| GCTGATACAAAATCCATTCC+TGG | 0.383064 | 5_2:-10411091 | Msa0756270:CDS |
| ATTGGATGAGAGGACAATAT+TGG | 0.383473 | 5_2:+10412515 | None:intergenic |
| AATTCAAAGTAACCCATGTT+TGG | 0.385809 | 5_2:+10411445 | None:intergenic |
| GAACTTCATGGCGCATGATT+AGG | 0.390929 | 5_2:+10411881 | None:intergenic |
| TTAGTCCTTCTCTACCTCAT+TGG | 0.392898 | 5_2:-10410766 | Msa0756270:CDS |
| ATAGGTGATAACAGCAACTT+TGG | 0.394928 | 5_2:+10412586 | None:intergenic |
| GGGTTCCTGTTTCAATGTCA+TGG | 0.396046 | 5_2:+10411782 | None:intergenic |
| AAATGAAGCTATCCTTTGTC+TGG | 0.396144 | 5_2:-10411941 | Msa0756270:CDS |
| CTCCGACTCGAAGAACTTCA+TGG | 0.400753 | 5_2:+10411869 | None:intergenic |
| TTGTAGTAGGCTGTTAGAAC+TGG | 0.404647 | 5_2:+10412018 | None:intergenic |
| AGAGTAGCTGATAATTCAAT+TGG | 0.409619 | 5_2:-10410947 | Msa0756270:CDS |
| ATGGTGTAGGACACTTCATT+TGG | 0.414625 | 5_2:+10411472 | None:intergenic |
| ACCTCAAGGTACTTTGTGTT+AGG | 0.415322 | 5_2:+10411625 | None:intergenic |
| CATGTCCAAAATACTTAAAC+CGG | 0.418636 | 5_2:-10411722 | Msa0756270:CDS |
| TTGGTTCTGTCATAGGCTTA+AGG | 0.419185 | 5_2:+10411491 | None:intergenic |
| CGTGTTGTTGAGTATTGATT+CGG | 0.420845 | 5_2:-10411209 | Msa0756270:CDS |
| TCAGCAAGGTCTACTAGCTT+TGG | 0.421816 | 5_2:+10411367 | None:intergenic |
| AGACAAAGGATAGCTTCATT+TGG | 0.426976 | 5_2:+10411943 | None:intergenic |
| GCCTACTATTCATCAAGAAA+TGG | 0.427538 | 5_2:-10412323 | Msa0756270:CDS |
| AACGTATAATCCCAAGAATC+TGG | 0.429037 | 5_2:-10411648 | Msa0756270:CDS |
| TACCTTGAGGTTATTGTCAC+TGG | 0.430760 | 5_2:-10411613 | Msa0756270:CDS |
| TGTAACAAAATTAGCGAGTA+CGG | 0.432761 | 5_2:+10411696 | None:intergenic |
| TCCATTTCTTGATGAATAGT+AGG | 0.437851 | 5_2:+10412322 | None:intergenic |
| ATGTATACTCAGATGCTTTG+TGG | 0.445009 | 5_2:-10411904 | Msa0756270:CDS |
| AGTGTTGAATCAATGTTGTT+TGG | 0.445864 | 5_2:-10411008 | Msa0756270:CDS |
| TGATTCAACACTTCTTCTGT+TGG | 0.447138 | 5_2:+10411019 | None:intergenic |
| AAATTAGCGAGTACGGGATC+CGG | 0.447662 | 5_2:+10411703 | None:intergenic |
| TTAGTCCATGACATTGAAAC+AGG | 0.449357 | 5_2:-10411787 | Msa0756270:CDS |
| CTGGTAAGAAACTCTGAGAT+TGG | 0.450542 | 5_2:+10412497 | None:intergenic |
| TTCAACACTTCTTCTGTTGG+AGG | 0.453608 | 5_2:+10411022 | None:intergenic |
| GACCTTGCTGATGTTGAAAT+CGG | 0.457109 | 5_2:-10411355 | Msa0756270:CDS |
| CTCCAGAACGACGTCGTTGA+AGG | 0.467415 | 5_2:-10410742 | Msa0756270:exon |
| ATCAGGTAAAAGATCTTCAT+AGG | 0.467919 | 5_2:+10412568 | None:intergenic |
| AAAATGGGAAATTTGCTAGA+TGG | 0.469709 | 5_2:-10410639 | Msa0756270:three_prime_UTR |
| AGAATGTTCAGGAGACAATT+GGG | 0.479539 | 5_2:-10411671 | Msa0756270:CDS |
| AACACATTGTAAGGGTCAAA+TGG | 0.480939 | 5_2:+10411973 | None:intergenic |
| TTTGAGATTTCATTTCATCA+TGG | 0.486702 | 5_2:-10412816 | Msa0756270:exon |
| GGTGATATTCTTCAAGTGAC+CGG | 0.488267 | 5_2:-10411277 | Msa0756270:CDS |
| GGTTATTGTCACTGGTGCTA+TGG | 0.489560 | 5_2:-10411605 | Msa0756270:CDS |
| CGCCTGACGAATTTGAATTG+GGG | 0.491640 | 5_2:+10411238 | None:intergenic |
| GTAACAAAATTAGCGAGTAC+GGG | 0.493378 | 5_2:+10411697 | None:intergenic |
| GGTTACCACTGTAATAATCA+AGG | 0.497324 | 5_2:+10411566 | None:intergenic |
| TAATGGAACTTCTTGACTCT+AGG | 0.502283 | 5_2:-10410805 | Msa0756270:CDS |
| CAATCTCAGAGTTTCTTACC+AGG | 0.504649 | 5_2:-10412496 | Msa0756270:intron |
| ACAATGAAACAGAAAGAAAG+AGG | 0.507518 | 5_2:+10412874 | None:intergenic |
| TACAGTTCAGGAACATCTGC+TGG | 0.508840 | 5_2:-10412361 | Msa0756270:intron |
| TTAATCAGTATAAAGTTCCT+AGG | 0.514790 | 5_2:-10410847 | Msa0756270:CDS |
| CAGAAGAAGGTGGTTCCAAA+AGG | 0.514827 | 5_2:+10412777 | None:intergenic |
| GGTCTTTGCCGTTACCGAGT+TGG | 0.514934 | 5_2:-10411298 | Msa0756270:CDS |
| GCAAGGTCTACTAGCTTTGG+AGG | 0.517582 | 5_2:+10411370 | None:intergenic |
| AATGGAACTTCTTGACTCTA+GGG | 0.522711 | 5_2:-10410804 | Msa0756270:CDS |
| TTCGGATAAAACAGACGAAT+CGG | 0.523805 | 5_2:-10411191 | Msa0756270:CDS |
| GGGGTCGGAGTTATGAAATC+CGG | 0.536582 | 5_2:+10411258 | None:intergenic |
| CCTAATGGCTCGGAGAAGCC+CGG | 0.537712 | 5_2:+10411834 | None:intergenic |
| GTTGAGCTGAAGGAACCTAA+TGG | 0.538471 | 5_2:+10411819 | None:intergenic |
| CTACACCATTATGCCAAACA+TGG | 0.539405 | 5_2:-10411458 | Msa0756270:CDS |
| GATGAAGCATACATTGTACA+TGG | 0.539933 | 5_2:+10411535 | None:intergenic |
| GCCTGACGAATTTGAATTGG+GGG | 0.543804 | 5_2:+10411239 | None:intergenic |
| TATGTTCCTGATTTGGACAA+AGG | 0.547413 | 5_2:-10412105 | Msa0756270:CDS |
| TTTGAATGTTTCACGATCAG+TGG | 0.548023 | 5_2:+10412610 | None:intergenic |
| GATAACATAATGTCCAGGAA+TGG | 0.549039 | 5_2:+10411078 | None:intergenic |
| ACAACTTACTGGTTCATCAC+TGG | 0.553006 | 5_2:+10412268 | None:intergenic |
| TAGGTTCCTTCAGCTCAACT+GGG | 0.562924 | 5_2:-10411815 | Msa0756270:CDS |
| ATTCAGCCCAGTTGAGCTGA+AGG | 0.574788 | 5_2:+10411809 | None:intergenic |
| AAACTCTGAGATTGGATGAG+AGG | 0.580999 | 5_2:+10412505 | None:intergenic |
| GGACGTGCCACTAACCCACT+TGG | 0.582325 | 5_2:+10412039 | None:intergenic |
| CAATAGATAACATAATGTCC+AGG | 0.583043 | 5_2:+10411073 | None:intergenic |
| TGGAGGTGAGTCACGTGAGA+GGG | 0.584345 | 5_2:+10411387 | None:intergenic |
| CGCCATGAAGTTCTTCGAGT+CGG | 0.584929 | 5_2:-10411871 | Msa0756270:CDS |
| GGAGTCCAATGAGGTAGAGA+AGG | 0.586779 | 5_2:+10410761 | None:intergenic |
| CCACTGTAATAATCAAGGGT+TGG | 0.588012 | 5_2:+10411571 | None:intergenic |
| CCAACCCTTGATTATTACAG+TGG | 0.591185 | 5_2:-10411571 | Msa0756270:CDS |
| GACTTGTTAACACATTGTAA+GGG | 0.591653 | 5_2:+10411965 | None:intergenic |
| CGTCGTTCTGGAGTCCAATG+AGG | 0.593147 | 5_2:+10410752 | None:intergenic |
| GGAACTTCTTGACTCTAGGG+TGG | 0.594581 | 5_2:-10410801 | Msa0756270:CDS |
| GAATATCACCAACTCGGTAA+CGG | 0.599476 | 5_2:+10411290 | None:intergenic |
| GGTTCATCACTGGCATGAGT+AGG | 0.600133 | 5_2:+10412278 | None:intergenic |
| GATATTCAACGCATTGCTAA+CGG | 0.601749 | 5_2:-10412548 | Msa0756270:CDS |
| GCTGAAGGAACCTAATGGCT+CGG | 0.602143 | 5_2:+10411824 | None:intergenic |
| CATGTTTGGCATAATGGTGT+AGG | 0.602304 | 5_2:+10411459 | None:intergenic |
| GTTACCACTGTAATAATCAA+GGG | 0.604520 | 5_2:+10411567 | None:intergenic |
| TACCGATTTCAACATCAGCA+AGG | 0.605061 | 5_2:+10411353 | None:intergenic |
| CTTGAAGAATATCACCAACT+CGG | 0.620317 | 5_2:+10411284 | None:intergenic |
| TTGAATTCAGTTTATAGACA+AGG | 0.625321 | 5_2:-10410971 | Msa0756270:CDS |
| TTGGAGGTGAGTCACGTGAG+AGG | 0.626134 | 5_2:+10411386 | None:intergenic |
| TTTGAAATGAATCCAGACAA+AGG | 0.634217 | 5_2:+10411929 | None:intergenic |
| GGAGTGAAACTCACGCACCT+AGG | 0.634419 | 5_2:+10410830 | None:intergenic |
| CACCAGTGACAATAACCTCA+AGG | 0.636499 | 5_2:+10411611 | None:intergenic |
| GAGAGGACAATATTGGAGAA+CGG | 0.645213 | 5_2:+10412522 | None:intergenic |
| TACACCATTATGCCAAACAT+GGG | 0.650318 | 5_2:-10411457 | Msa0756270:CDS |
| ATGGATTATGCAATATCGCG+TGG | 0.656625 | 5_2:-10410878 | Msa0756270:CDS |
| TGAAGTTCTTCGAGTCGGAG+CGG | 0.662649 | 5_2:-10411866 | Msa0756270:CDS |
| GCCTAACACAAAGTACCTTG+AGG | 0.669941 | 5_2:-10411626 | Msa0756270:CDS |
| GATTAAGTATGTGTAATTTG+GGG | 0.683020 | 5_2:-10410539 | Msa0756270:three_prime_UTR |
| GGCTGTACAATAACTGACGA+CGG | 0.700187 | 5_2:+10412299 | None:intergenic |
| GATGAAGATGAATCATCATG+TGG | 0.735319 | 5_2:+10411418 | None:intergenic |
| TGGACCATTAGAGATACGTG+TGG | 0.736597 | 5_2:-10410927 | Msa0756270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAAAAAGCAAAA+TGG | - | chr5_2:10412670-10412689 | Msa0756270:CDS | 10.0% |
| !! | ATAATAATAAAAAGCAAAAT+GGG | - | chr5_2:10412671-10412690 | Msa0756270:CDS | 10.0% |
| !!! | ATTAAATACTGTTTCTTAAT+TGG | - | chr5_2:10411187-10411206 | Msa0756270:CDS | 15.0% |
| !!! | TTAAATACTGTTTCTTAATT+GGG | - | chr5_2:10411188-10411207 | Msa0756270:CDS | 15.0% |
| !!! | TTTATTTTTCCTTTTTGTTT+CGG | - | chr5_2:10412870-10412889 | Msa0756270:five_prime_UTR | 15.0% |
| !! | GTATAATTATCACTACAATA+TGG | + | chr5_2:10411124-10411143 | None:intergenic | 20.0% |
| !! | ATGATTAAGTATGTGTAATT+TGG | - | chr5_2:10412784-10412803 | Msa0756270:CDS | 20.0% |
| !! | TGATTAAGTATGTGTAATTT+GGG | - | chr5_2:10412785-10412804 | Msa0756270:CDS | 20.0% |
| !! | AACATTCAAAAGCAAAAATA+GGG | + | chr5_2:10412850-10412869 | None:intergenic | 20.0% |
| !! | AAACATTCAAAAGCAAAAAT+AGG | + | chr5_2:10412851-10412870 | None:intergenic | 20.0% |
| !! | TTTGAGATTTCATTTCATCA+TGG | - | chr5_2:10410509-10410528 | Msa0756270:three_prime_UTR | 25.0% |
| ! | AATATGGAGTAATAAACTCA+CGG | + | chr5_2:10411108-10411127 | None:intergenic | 25.0% |
| ! | TTTGTTACAAAAGAATGTTC+AGG | - | chr5_2:10411643-10411662 | Msa0756270:CDS | 25.0% |
| ! | CTTATAATCACAACTTATTC+AGG | - | chr5_2:10412006-10412025 | Msa0756270:CDS | 25.0% |
| ! | TGGACATTATGTTATCTATT+GGG | - | chr5_2:10412254-10412273 | Msa0756270:intron | 25.0% |
| ! | TTGAATTCAGTTTATAGACA+AGG | - | chr5_2:10412354-10412373 | Msa0756270:CDS | 25.0% |
| ! | TTAATCAGTATAAAGTTCCT+AGG | - | chr5_2:10412478-10412497 | Msa0756270:intron | 25.0% |
| ! | GATTAAGTATGTGTAATTTG+GGG | - | chr5_2:10412786-10412805 | Msa0756270:CDS | 25.0% |
| ACAATGAAACAGAAAGAAAG+AGG | + | chr5_2:10410454-10410473 | None:intergenic | 30.0% | |
| !! | TGTTGAATCTGAAATCCTTT+TGG | - | chr5_2:10410533-10410552 | Msa0756270:three_prime_UTR | 30.0% |
| ! | TTGAAACGATTTGGACTTAA+CGG | - | chr5_2:10410690-10410709 | Msa0756270:three_prime_UTR | 30.0% |
| ATCAGGTAAAAGATCTTCAT+AGG | + | chr5_2:10410760-10410779 | None:intergenic | 30.0% | |
| AGTATCAATGAATATGAACC+TGG | + | chr5_2:10410850-10410869 | None:intergenic | 30.0% | |
| GTGAATGAAAATTACAGTTC+AGG | - | chr5_2:10410952-10410971 | Msa0756270:CDS | 30.0% | |
| TCCATTTCTTGATGAATAGT+AGG | + | chr5_2:10411006-10411025 | None:intergenic | 30.0% | |
| CTATAACAGAAACAACTTAC+TGG | + | chr5_2:10411071-10411090 | None:intergenic | 30.0% | |
| !! | GACTTGTTAACACATTGTAA+GGG | + | chr5_2:10411363-10411382 | None:intergenic | 30.0% |
| ! | TTTGAAATGAATCCAGACAA+AGG | + | chr5_2:10411399-10411418 | None:intergenic | 30.0% |
| !!! | ATCAGTGATTTTTGGGTTTA+GGG | + | chr5_2:10411566-10411585 | None:intergenic | 30.0% |
| ! | TAGAAGGATCAGTGATTTTT+GGG | + | chr5_2:10411573-10411592 | None:intergenic | 30.0% |
| ! | ATAGAAGGATCAGTGATTTT+TGG | + | chr5_2:10411574-10411593 | None:intergenic | 30.0% |
| CATGTCCAAAATACTTAAAC+CGG | - | chr5_2:10411603-10411622 | Msa0756270:CDS | 30.0% | |
| TGTAACAAAATTAGCGAGTA+CGG | + | chr5_2:10411632-10411651 | None:intergenic | 30.0% | |
| GTTACCACTGTAATAATCAA+GGG | + | chr5_2:10411761-10411780 | None:intergenic | 30.0% | |
| !! | GCTTCATCTGAATGTTATTT+TGG | - | chr5_2:10411805-10411824 | Msa0756270:CDS | 30.0% |
| AATTCAAAGTAACCCATGTT+TGG | + | chr5_2:10411883-10411902 | None:intergenic | 30.0% | |
| CAATAGATAACATAATGTCC+AGG | + | chr5_2:10412255-10412274 | None:intergenic | 30.0% | |
| CTGGACATTATGTTATCTAT+TGG | - | chr5_2:10412253-10412272 | Msa0756270:intron | 30.0% | |
| ! | AGTGTTGAATCAATGTTGTT+TGG | - | chr5_2:10412317-10412336 | Msa0756270:CDS | 30.0% |
| ! | GAATCAATGTTGTTTGGTTA+TGG | - | chr5_2:10412323-10412342 | Msa0756270:CDS | 30.0% |
| AGAGTAGCTGATAATTCAAT+TGG | - | chr5_2:10412378-10412397 | Msa0756270:intron | 30.0% | |
| !! | AAAATGGGAAATTTGCTAGA+TGG | - | chr5_2:10412686-10412705 | Msa0756270:CDS | 30.0% |
| TTATCAAAGCCGAAACAAAA+AGG | + | chr5_2:10412882-10412901 | None:intergenic | 30.0% | |
| ! | TTTTCATCAACAGAAGAAGG+TGG | + | chr5_2:10410561-10410580 | None:intergenic | 35.0% |
| ! | CTCTTTTCATCAACAGAAGA+AGG | + | chr5_2:10410564-10410583 | None:intergenic | 35.0% |
| ACTGAGTACTTGAAACGATT+TGG | - | chr5_2:10410681-10410700 | Msa0756270:three_prime_UTR | 35.0% | |
| TTTGAATGTTTCACGATCAG+TGG | + | chr5_2:10410718-10410737 | None:intergenic | 35.0% | |
| ATAGGTGATAACAGCAACTT+TGG | + | chr5_2:10410742-10410761 | None:intergenic | 35.0% | |
| TTAGCAATGCGTTGAATATC+AGG | + | chr5_2:10410777-10410796 | None:intergenic | 35.0% | |
| GATATTCAACGCATTGCTAA+CGG | - | chr5_2:10410777-10410796 | Msa0756270:CDS | 35.0% | |
| ATTGGATGAGAGGACAATAT+TGG | + | chr5_2:10410813-10410832 | None:intergenic | 35.0% | |
| GCCTACTATTCATCAAGAAA+TGG | - | chr5_2:10411002-10411021 | Msa0756270:CDS | 35.0% | |
| CAACAGATATGTTCCTGATT+TGG | - | chr5_2:10411213-10411232 | Msa0756270:CDS | 35.0% | |
| !! | TATGTTCCTGATTTGGACAA+AGG | - | chr5_2:10411220-10411239 | Msa0756270:CDS | 35.0% |
| CAGAAACAAAAACTCCAAGT+GGG | - | chr5_2:10411272-10411291 | Msa0756270:CDS | 35.0% | |
| !! | GAACTGTTCACTTTTGTAGT+AGG | + | chr5_2:10411323-10411342 | None:intergenic | 35.0% |
| AACACATTGTAAGGGTCAAA+TGG | + | chr5_2:10411355-10411374 | None:intergenic | 35.0% | |
| !! | GGACTTGTTAACACATTGTA+AGG | + | chr5_2:10411364-10411383 | None:intergenic | 35.0% |
| AGACAAAGGATAGCTTCATT+TGG | + | chr5_2:10411385-10411404 | None:intergenic | 35.0% | |
| AAATGAAGCTATCCTTTGTC+TGG | - | chr5_2:10411384-10411403 | Msa0756270:CDS | 35.0% | |
| ATGTATACTCAGATGCTTTG+TGG | - | chr5_2:10411421-10411440 | Msa0756270:CDS | 35.0% | |
| TTAGTCCATGACATTGAAAC+AGG | - | chr5_2:10411538-10411557 | Msa0756270:CDS | 35.0% | |
| !!! | GATCAGTGATTTTTGGGTTT+AGG | + | chr5_2:10411567-10411586 | None:intergenic | 35.0% |
| GTAACAAAATTAGCGAGTAC+GGG | + | chr5_2:10411631-10411650 | None:intergenic | 35.0% | |
| AAGAATGTTCAGGAGACAAT+TGG | - | chr5_2:10411653-10411672 | Msa0756270:CDS | 35.0% | |
| AGAATGTTCAGGAGACAATT+GGG | - | chr5_2:10411654-10411673 | Msa0756270:CDS | 35.0% | |
| AACGTATAATCCCAAGAATC+TGG | - | chr5_2:10411677-10411696 | Msa0756270:CDS | 35.0% | |
| GGTTACCACTGTAATAATCA+AGG | + | chr5_2:10411762-10411781 | None:intergenic | 35.0% | |
| !!! | ACATTGTACATGGTTTTGGA+AGG | + | chr5_2:10411783-10411802 | None:intergenic | 35.0% |
| ! | GCATACATTGTACATGGTTT+TGG | + | chr5_2:10411787-10411806 | None:intergenic | 35.0% |
| GATGAAGCATACATTGTACA+TGG | + | chr5_2:10411793-10411812 | None:intergenic | 35.0% | |
| !! | ACTTCATTTGGTTCTGTCAT+AGG | + | chr5_2:10411844-10411863 | None:intergenic | 35.0% |
| TACACCATTATGCCAAACAT+GGG | - | chr5_2:10411868-10411887 | Msa0756270:CDS | 35.0% | |
| GATGAAGATGAATCATCATG+TGG | + | chr5_2:10411910-10411929 | None:intergenic | 35.0% | |
| CTTGAAGAATATCACCAACT+CGG | + | chr5_2:10412044-10412063 | None:intergenic | 35.0% | |
| !! | CGTGTTGTTGAGTATTGATT+CGG | - | chr5_2:10412116-10412135 | Msa0756270:intron | 35.0% |
| TTCGGATAAAACAGACGAAT+CGG | - | chr5_2:10412134-10412153 | Msa0756270:intron | 35.0% | |
| GATAACATAATGTCCAGGAA+TGG | + | chr5_2:10412250-10412269 | None:intergenic | 35.0% | |
| TGATTCAACACTTCTTCTGT+TGG | + | chr5_2:10412309-10412328 | None:intergenic | 35.0% | |
| GAGTCAAGAAGTTCCATTAT+AGG | + | chr5_2:10412519-10412538 | None:intergenic | 35.0% | |
| TAATGGAACTTCTTGACTCT+AGG | - | chr5_2:10412520-10412539 | Msa0756270:CDS | 35.0% | |
| AATGGAACTTCTTGACTCTA+GGG | - | chr5_2:10412521-10412540 | Msa0756270:CDS | 35.0% | |
| GAGAGGACAATATTGGAGAA+CGG | + | chr5_2:10410806-10410825 | None:intergenic | 40.0% | |
| !! | AAACTCTGAGATTGGATGAG+AGG | + | chr5_2:10410823-10410842 | None:intergenic | 40.0% |
| !! | CTGGTAAGAAACTCTGAGAT+TGG | + | chr5_2:10410831-10410850 | None:intergenic | 40.0% |
| CAATCTCAGAGTTTCTTACC+AGG | - | chr5_2:10410829-10410848 | Msa0756270:CDS | 40.0% | |
| !! | ACAACTTACTGGTTCATCAC+TGG | + | chr5_2:10411060-10411079 | None:intergenic | 40.0% |
| ! | GCTTTTCCTTTGTCCAAATC+AGG | + | chr5_2:10411229-10411248 | None:intergenic | 40.0% |
| GCAGAAACAAAAACTCCAAG+TGG | - | chr5_2:10411271-10411290 | Msa0756270:CDS | 40.0% | |
| !! | AAAAACTCCAAGTGGGTTAG+TGG | - | chr5_2:10411279-10411298 | Msa0756270:CDS | 40.0% |
| TTGTAGTAGGCTGTTAGAAC+TGG | + | chr5_2:10411310-10411329 | None:intergenic | 40.0% | |
| GACATGCACTGTTTGATAGA+AGG | + | chr5_2:10411589-10411608 | None:intergenic | 40.0% | |
| ! | GGGATCCGGTTTAAGTATTT+TGG | + | chr5_2:10411611-10411630 | None:intergenic | 40.0% |
| TTGTGTTAGGCCAGATTCTT+GGG | + | chr5_2:10411690-10411709 | None:intergenic | 40.0% | |
| TTTGTGTTAGGCCAGATTCT+TGG | + | chr5_2:10411691-10411710 | None:intergenic | 40.0% | |
| ! | ACCTCAAGGTACTTTGTGTT+AGG | + | chr5_2:10411703-10411722 | None:intergenic | 40.0% |
| TACCTTGAGGTTATTGTCAC+TGG | - | chr5_2:10411712-10411731 | Msa0756270:CDS | 40.0% | |
| CCACTGTAATAATCAAGGGT+TGG | + | chr5_2:10411757-10411776 | None:intergenic | 40.0% | |
| CCAACCCTTGATTATTACAG+TGG | - | chr5_2:10411754-10411773 | Msa0756270:CDS | 40.0% | |
| !! | TTGGTTCTGTCATAGGCTTA+AGG | + | chr5_2:10411837-10411856 | None:intergenic | 40.0% |
| ATGGTGTAGGACACTTCATT+TGG | + | chr5_2:10411856-10411875 | None:intergenic | 40.0% | |
| CATGTTTGGCATAATGGTGT+AGG | + | chr5_2:10411869-10411888 | None:intergenic | 40.0% | |
| CTACACCATTATGCCAAACA+TGG | - | chr5_2:10411867-10411886 | Msa0756270:CDS | 40.0% | |
| GTAACCCATGTTTGGCATAA+TGG | + | chr5_2:10411875-10411894 | None:intergenic | 40.0% | |
| GACCTTGCTGATGTTGAAAT+CGG | - | chr5_2:10411970-10411989 | Msa0756270:CDS | 40.0% | |
| !! | TACCGATTTCAACATCAGCA+AGG | + | chr5_2:10411975-10411994 | None:intergenic | 40.0% |
| GAATATCACCAACTCGGTAA+CGG | + | chr5_2:10412038-10412057 | None:intergenic | 40.0% | |
| GGTGATATTCTTCAAGTGAC+CGG | - | chr5_2:10412048-10412067 | Msa0756270:CDS | 40.0% | |
| TCGCCTGACGAATTTGAATT+GGG | + | chr5_2:10412091-10412110 | None:intergenic | 40.0% | |
| TTCGCCTGACGAATTTGAAT+TGG | + | chr5_2:10412092-10412111 | None:intergenic | 40.0% | |
| GCTGATACAAAATCCATTCC+TGG | - | chr5_2:10412234-10412253 | Msa0756270:intron | 40.0% | |
| ! | CTATTGGGAGCTTTTGATGA+AGG | - | chr5_2:10412269-10412288 | Msa0756270:intron | 40.0% |
| TTCAACACTTCTTCTGTTGG+AGG | + | chr5_2:10412306-10412325 | None:intergenic | 40.0% | |
| TTCACCACACGTATCTCTAA+TGG | + | chr5_2:10412405-10412424 | None:intergenic | 40.0% | |
| GAGATACGTGTGGTGAAAAA+TGG | - | chr5_2:10412408-10412427 | Msa0756270:intron | 40.0% | |
| ! | ATGGATTATGCAATATCGCG+TGG | - | chr5_2:10412447-10412466 | Msa0756270:intron | 40.0% |
| CGTGAGTTTCACTCCTATAA+TGG | - | chr5_2:10412503-10412522 | Msa0756270:CDS | 40.0% | |
| TTAGTCCTTCTCTACCTCAT+TGG | - | chr5_2:10412559-10412578 | Msa0756270:CDS | 40.0% | |
| CAGAAGAAGGTGGTTCCAAA+AGG | + | chr5_2:10410551-10410570 | None:intergenic | 45.0% | |
| TACAGTTCAGGAACATCTGC+TGG | - | chr5_2:10410964-10410983 | Msa0756270:CDS | 45.0% | |
| GGCTGTACAATAACTGACGA+CGG | + | chr5_2:10411029-10411048 | None:intergenic | 45.0% | |
| GAACTTCATGGCGCATGATT+AGG | + | chr5_2:10411447-10411466 | None:intergenic | 45.0% | |
| GTTGAGCTGAAGGAACCTAA+TGG | + | chr5_2:10411509-10411528 | None:intergenic | 45.0% | |
| TTAGGTTCCTTCAGCTCAAC+TGG | - | chr5_2:10411509-10411528 | Msa0756270:CDS | 45.0% | |
| TAGGTTCCTTCAGCTCAACT+GGG | - | chr5_2:10411510-10411529 | Msa0756270:CDS | 45.0% | |
| GGGTTCCTGTTTCAATGTCA+TGG | + | chr5_2:10411546-10411565 | None:intergenic | 45.0% | |
| AAATTAGCGAGTACGGGATC+CGG | + | chr5_2:10411625-10411644 | None:intergenic | 45.0% | |
| ! | GCCTAACACAAAGTACCTTG+AGG | - | chr5_2:10411699-10411718 | Msa0756270:CDS | 45.0% |
| CACCAGTGACAATAACCTCA+AGG | + | chr5_2:10411717-10411736 | None:intergenic | 45.0% | |
| ! | GGTTATTGTCACTGGTGCTA+TGG | - | chr5_2:10411720-10411739 | Msa0756270:CDS | 45.0% |
| ! | TCAGCAAGGTCTACTAGCTT+TGG | + | chr5_2:10411961-10411980 | None:intergenic | 45.0% |
| GACGAATTTGAATTGGGGGT+CGG | + | chr5_2:10412085-10412104 | None:intergenic | 45.0% | |
| ACCCCCAATTCAAATTCGTC+AGG | - | chr5_2:10412085-10412104 | Msa0756270:CDS | 45.0% | |
| GCCTGACGAATTTGAATTGG+GGG | + | chr5_2:10412089-10412108 | None:intergenic | 45.0% | |
| CGCCTGACGAATTTGAATTG+GGG | + | chr5_2:10412090-10412109 | None:intergenic | 45.0% | |
| TGGACCATTAGAGATACGTG+TGG | - | chr5_2:10412398-10412417 | Msa0756270:intron | 45.0% | |
| GGTGAAAAATGGCACGTTTG+AGG | - | chr5_2:10412419-10412438 | Msa0756270:intron | 45.0% | |
| TGGCACGTTTGAGGAACTAA+TGG | - | chr5_2:10412428-10412447 | Msa0756270:intron | 45.0% | |
| GGTTCATCACTGGCATGAGT+AGG | + | chr5_2:10411050-10411069 | None:intergenic | 50.0% | |
| CGCCATGAAGTTCTTCGAGT+CGG | - | chr5_2:10411454-10411473 | Msa0756270:CDS | 50.0% | |
| ! | CTCCGACTCGAAGAACTTCA+TGG | + | chr5_2:10411459-10411478 | None:intergenic | 50.0% |
| TGAAGTTCTTCGAGTCGGAG+CGG | - | chr5_2:10411459-10411478 | Msa0756270:CDS | 50.0% | |
| GCTGAAGGAACCTAATGGCT+CGG | + | chr5_2:10411504-10411523 | None:intergenic | 50.0% | |
| ATTCAGCCCAGTTGAGCTGA+AGG | + | chr5_2:10411519-10411538 | None:intergenic | 50.0% | |
| GAGTCACGTGAGAGGGTTAT+AGG | + | chr5_2:10411934-10411953 | None:intergenic | 50.0% | |
| !! | GCAAGGTCTACTAGCTTTGG+AGG | + | chr5_2:10411958-10411977 | None:intergenic | 50.0% |
| GGGGTCGGAGTTATGAAATC+CGG | + | chr5_2:10412070-10412089 | None:intergenic | 50.0% | |
| ! | GGAACTTCTTGACTCTAGGG+TGG | - | chr5_2:10412524-10412543 | Msa0756270:CDS | 50.0% |
| GGAGTCCAATGAGGTAGAGA+AGG | + | chr5_2:10412567-10412586 | None:intergenic | 50.0% | |
| ATCCTTCAACGACGTCGTTC+TGG | + | chr5_2:10412588-10412607 | None:intergenic | 50.0% | |
| TGGAGGTGAGTCACGTGAGA+GGG | + | chr5_2:10411941-10411960 | None:intergenic | 55.0% | |
| TTGGAGGTGAGTCACGTGAG+AGG | + | chr5_2:10411942-10411961 | None:intergenic | 55.0% | |
| GGTCTTTGCCGTTACCGAGT+TGG | - | chr5_2:10412027-10412046 | Msa0756270:CDS | 55.0% | |
| GGAGTGAAACTCACGCACCT+AGG | + | chr5_2:10412498-10412517 | None:intergenic | 55.0% | |
| !! | CGTCGTTCTGGAGTCCAATG+AGG | + | chr5_2:10412576-10412595 | None:intergenic | 55.0% |
| CTCCAGAACGACGTCGTTGA+AGG | - | chr5_2:10412583-10412602 | Msa0756270:CDS | 55.0% | |
| ! | GGACGTGCCACTAACCCACT+TGG | + | chr5_2:10411289-10411308 | None:intergenic | 60.0% |
| ! | GTCGGAGCGGTTTTCGCTTC+CGG | - | chr5_2:10411472-10411491 | Msa0756270:CDS | 60.0% |
| ! | TCGGAGCGGTTTTCGCTTCC+GGG | - | chr5_2:10411473-10411492 | Msa0756270:CDS | 60.0% |
| ! | CCTAATGGCTCGGAGAAGCC+CGG | + | chr5_2:10411494-10411513 | None:intergenic | 60.0% |
| CCGGGCTTCTCCGAGCCATT+AGG | - | chr5_2:10411491-10411510 | Msa0756270:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 10410432 | 10412915 | 10410432 | ID=Msa0756270;Name=Msa0756270 |
| chr5_2 | mRNA | 10410432 | 10412915 | 10410432 | ID=Msa0756270-mRNA-1;Parent=Msa0756270;Name=Msa0756270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=96|1|1|1|1|1|3|313|602 |
| chr5_2 | exon | 10410432 | 10412128 | 10410432 | ID=Msa0756270-mRNA-1:exon:4752;Parent=Msa0756270-mRNA-1 |
| chr5_2 | exon | 10412277 | 10412378 | 10412277 | ID=Msa0756270-mRNA-1:exon:4751;Parent=Msa0756270-mRNA-1 |
| chr5_2 | exon | 10412497 | 10412915 | 10412497 | ID=Msa0756270-mRNA-1:exon:4750;Parent=Msa0756270-mRNA-1 |
| chr5_2 | five_prime_UTR | 10412820 | 10412915 | 10412820 | ID=Msa0756270-mRNA-1:five_prime_utr;Parent=Msa0756270-mRNA-1 |
| chr5_2 | CDS | 10412497 | 10412819 | 10412497 | ID=Msa0756270-mRNA-1:cds;Parent=Msa0756270-mRNA-1 |
| chr5_2 | CDS | 10412277 | 10412378 | 10412277 | ID=Msa0756270-mRNA-1:cds;Parent=Msa0756270-mRNA-1 |
| chr5_2 | CDS | 10410745 | 10412128 | 10410745 | ID=Msa0756270-mRNA-1:cds;Parent=Msa0756270-mRNA-1 |
| chr5_2 | three_prime_UTR | 10410432 | 10410744 | 10410432 | ID=Msa0756270-mRNA-1:three_prime_utr;Parent=Msa0756270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
