Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757480 | XP_003611921.1 | 95.225 | 377 | 18 | 0 | 69 | 445 | 4 | 380 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757480 | sp|Q56XQ0|U496I_ARATH | 52.747 | 364 | 169 | 2 | 82 | 445 | 20 | 380 | 7.79e-123 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757480 | G7KC47 | 95.225 | 377 | 18 | 0 | 69 | 445 | 4 | 380 | 0.0 | 729 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0757430 | Msa0757480 | 0.992431 | 2.998375e-193 | -8.615850e-47 |
| Msa0757480 | Msa0837340 | 0.870472 | 1.422261e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757480 | MtrunA17_Chr5g0403571 | 95.225 | 377 | 18 | 0 | 69 | 445 | 4 | 380 | 0.0 | 729 |
| Msa0757480 | MtrunA17_Chr8g0373611 | 70.241 | 373 | 106 | 2 | 73 | 442 | 2 | 372 | 1.11e-173 | 491 |
| Msa0757480 | MtrunA17_Chr4g0034521 | 61.080 | 352 | 132 | 3 | 92 | 443 | 25 | 371 | 1.55e-137 | 399 |
| Msa0757480 | MtrunA17_Chr1g0162701 | 54.839 | 372 | 158 | 3 | 71 | 442 | 6 | 367 | 1.23e-126 | 371 |
| Msa0757480 | MtrunA17_Chr3g0080561 | 87.342 | 79 | 10 | 0 | 355 | 433 | 1 | 79 | 1.93e-39 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757480 | AT2G18630.2 | 52.747 | 364 | 169 | 2 | 82 | 445 | 20 | 380 | 6.65e-124 | 365 |
| Msa0757480 | AT2G18630.1 | 52.747 | 364 | 169 | 2 | 82 | 445 | 20 | 380 | 7.92e-124 | 365 |
| Msa0757480 | AT4G34320.2 | 56.657 | 353 | 147 | 4 | 92 | 443 | 19 | 366 | 7.72e-118 | 349 |
| Msa0757480 | AT4G34320.1 | 56.657 | 353 | 147 | 4 | 92 | 443 | 19 | 366 | 7.72e-118 | 349 |
| Msa0757480 | AT5G66675.3 | 50.653 | 383 | 179 | 4 | 71 | 445 | 17 | 397 | 1.00e-117 | 350 |
| Msa0757480 | AT5G66675.4 | 50.653 | 383 | 179 | 4 | 71 | 445 | 17 | 397 | 1.00e-117 | 350 |
| Msa0757480 | AT5G66675.1 | 50.653 | 383 | 179 | 4 | 71 | 445 | 17 | 397 | 1.00e-117 | 350 |
| Msa0757480 | AT5G66675.2 | 50.653 | 383 | 179 | 4 | 71 | 445 | 17 | 397 | 1.00e-117 | 350 |
| Msa0757480 | AT4G34330.1 | 48.000 | 350 | 164 | 4 | 92 | 441 | 17 | 348 | 9.61e-99 | 300 |
| Msa0757480 | AT5G66670.1 | 40.741 | 378 | 215 | 3 | 71 | 441 | 17 | 392 | 6.27e-87 | 271 |
| Msa0757480 | AT5G66670.3 | 40.741 | 378 | 215 | 3 | 71 | 441 | 17 | 392 | 6.27e-87 | 271 |
| Msa0757480 | AT5G66670.4 | 40.741 | 378 | 215 | 3 | 71 | 441 | 17 | 392 | 6.27e-87 | 271 |
| Msa0757480 | AT5G66670.2 | 40.741 | 378 | 215 | 3 | 71 | 441 | 17 | 392 | 6.27e-87 | 271 |
| Msa0757480 | AT5G66660.1 | 39.096 | 376 | 218 | 5 | 75 | 441 | 20 | 393 | 5.04e-76 | 243 |
| Msa0757480 | AT3G28290.1 | 29.144 | 374 | 236 | 9 | 92 | 440 | 11 | 380 | 1.64e-34 | 133 |
| Msa0757480 | AT3G28300.1 | 29.144 | 374 | 236 | 9 | 92 | 440 | 11 | 380 | 1.64e-34 | 133 |
| Msa0757480 | AT3G28270.2 | 28.889 | 360 | 238 | 7 | 96 | 440 | 16 | 372 | 7.79e-34 | 130 |
| Msa0757480 | AT3G28270.1 | 28.889 | 360 | 238 | 7 | 96 | 440 | 16 | 372 | 7.79e-34 | 130 |
| Msa0757480 | AT3G28320.1 | 25.159 | 314 | 212 | 8 | 148 | 440 | 2 | 313 | 1.04e-18 | 87.0 |
| Msa0757480 | AT3G57100.1 | 24.233 | 326 | 218 | 7 | 133 | 445 | 43 | 352 | 6.85e-18 | 85.1 |
Find 82 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATACGAGACAGCTTTAA+AGG | 0.201770 | 5_2:-12358266 | Msa0757480:CDS |
| CAATAGGCTCATTTGGAAAA+TGG | 0.266155 | 5_2:-12358306 | Msa0757480:CDS |
| GCATCGAAGGATTGCAAGTT+TGG | 0.278688 | 5_2:+12358964 | None:intergenic |
| CCAACGTAGTTCTGAAATTC+TGG | 0.291003 | 5_2:-12359757 | Msa0757480:CDS |
| TTTGATGAAGAGGTTCAAAA+TGG | 0.309858 | 5_2:-12358637 | Msa0757480:CDS |
| GCTGTTCCAATAGGCTCATT+TGG | 0.323940 | 5_2:-12358313 | Msa0757480:CDS |
| GGAAGTTGTCAAGGTCATTC+TGG | 0.348743 | 5_2:-12358824 | Msa0757480:CDS |
| ATCCTTCGATGCTACCATTC+AGG | 0.353874 | 5_2:-12358953 | Msa0757480:CDS |
| GAATAAAATTCTTCAGTAAA+GGG | 0.368691 | 5_2:+12358550 | None:intergenic |
| TAGCCATAGATCTCTATCTA+AGG | 0.369391 | 5_2:-12359855 | Msa0757480:CDS |
| CCTGTTGTAACAGCTTTGGC+AGG | 0.382385 | 5_2:-12358343 | Msa0757480:CDS |
| TGGACTGCAAGCAAGATATA+TGG | 0.382413 | 5_2:-12358804 | Msa0757480:CDS |
| CCTGCCAAAGCTGTTACAAC+AGG | 0.393145 | 5_2:+12358343 | None:intergenic |
| CTCTCTTGCTCAAGGGATTG+AGG | 0.394697 | 5_2:-12358908 | Msa0757480:CDS |
| GAATGACCTTGACAACTTCC+TGG | 0.395392 | 5_2:+12358827 | None:intergenic |
| AACAGCTTTGGCAGGGGCAT+TGG | 0.398944 | 5_2:-12358335 | Msa0757480:CDS |
| CTTAAGGATTTCAAGGAAAC+CGG | 0.407846 | 5_2:-12358577 | Msa0757480:CDS |
| AAAGACGTTGAAAGGGCTTA+AGG | 0.409195 | 5_2:-12358593 | Msa0757480:CDS |
| CGAATAAAATTCTTCAGTAA+AGG | 0.416129 | 5_2:+12358549 | None:intergenic |
| GAACCTTAGATAGAGATCTA+TGG | 0.419785 | 5_2:+12359852 | None:intergenic |
| CACCCATTTGAATCGGTGTT+GGG | 0.419900 | 5_2:+12359043 | None:intergenic |
| TGTCCCAACACCGATTCAAA+TGG | 0.439699 | 5_2:-12359046 | Msa0757480:CDS |
| CCTGTTGGTGCGCTCCTGAA+TGG | 0.441077 | 5_2:+12358939 | None:intergenic |
| TGGTGGATATGAATAACATT+CGG | 0.442086 | 5_2:-12358195 | Msa0757480:CDS |
| GTTCATGTCGAGAAGACTTC+CGG | 0.442461 | 5_2:+12358849 | None:intergenic |
| CCATTCAGGAGCGCACCAAC+AGG | 0.442576 | 5_2:-12358939 | Msa0757480:CDS |
| GGGGCATTGGCTGTTCCAAT+AGG | 0.449406 | 5_2:-12358322 | Msa0757480:CDS |
| GAAAGGGCTTAAGGATTTCA+AGG | 0.451917 | 5_2:-12358584 | Msa0757480:CDS |
| GGTGGATATGAATAACATTC+GGG | 0.452854 | 5_2:-12358194 | Msa0757480:CDS |
| AAATACGAGACAGCTTTAAA+GGG | 0.454834 | 5_2:-12358265 | Msa0757480:CDS |
| TCTCTTGGAGAAGGAATTCA+AGG | 0.455378 | 5_2:-12359788 | Msa0757480:CDS |
| TCGTGACTTGTTCTCCTTGG+TGG | 0.458271 | 5_2:-12358770 | Msa0757480:CDS |
| CATTACAAAACTCCAATGTC+TGG | 0.460870 | 5_2:+12358725 | None:intergenic |
| GAAAATAAAGATTGAATCCA+TGG | 0.463994 | 5_2:-12358155 | Msa0757480:CDS |
| TTCTTCAGTAAAGGGGTCCC+CGG | 0.472017 | 5_2:+12358558 | None:intergenic |
| GAGGTTCAAAATGGAGTTGA+AGG | 0.475155 | 5_2:-12358628 | Msa0757480:CDS |
| GGATCGTGACTTGTTCTCCT+TGG | 0.484403 | 5_2:-12358773 | Msa0757480:CDS |
| CTGTTGTAACAGCTTTGGCA+GGG | 0.485120 | 5_2:-12358342 | Msa0757480:CDS |
| TGACTTGTTCTCCTTGGTGG+AGG | 0.486659 | 5_2:-12358767 | Msa0757480:CDS |
| ACTTATGTAAAGACGTTGAA+AGG | 0.491081 | 5_2:-12358601 | Msa0757480:CDS |
| CGAGAATAGTCTCCAGACAT+TGG | 0.503949 | 5_2:-12358737 | Msa0757480:CDS |
| CTTATGTAAAGACGTTGAAA+GGG | 0.504265 | 5_2:-12358600 | Msa0757480:CDS |
| TGTTGTAACAGCTTTGGCAG+GGG | 0.510574 | 5_2:-12358341 | Msa0757480:CDS |
| TGAAATTCTGGCTGAAACCC+AGG | 0.516978 | 5_2:-12359745 | Msa0757480:intron |
| GTCCCAACACCGATTCAAAT+GGG | 0.524166 | 5_2:-12359045 | Msa0757480:CDS |
| GCCAAAGCTGTTACAACAGG+GGG | 0.524847 | 5_2:+12358346 | None:intergenic |
| GAGTCACTAGGAGAAGTTAC+CGG | 0.525494 | 5_2:-12358868 | Msa0757480:CDS |
| CTCCTGAATGGTAGCATCGA+AGG | 0.528207 | 5_2:+12358951 | None:intergenic |
| AGCTGATCAATGTAGTAGGC+AGG | 0.528656 | 5_2:-12358020 | Msa0757480:CDS |
| GAATGCGCACCCATTTGAAT+CGG | 0.533513 | 5_2:+12359036 | None:intergenic |
| GCACCCATTTGAATCGGTGT+TGG | 0.536554 | 5_2:+12359042 | None:intergenic |
| GTGATCAACTCTCTTGCTCA+AGG | 0.543035 | 5_2:-12358916 | Msa0757480:CDS |
| TGCAAGCTGATCAATGTAGT+AGG | 0.543984 | 5_2:-12358024 | Msa0757480:CDS |
| GTTATCATTTCAATGCATGT+TGG | 0.551745 | 5_2:-12358232 | Msa0757480:CDS |
| TCTATATCGCTTGAGTCACT+AGG | 0.561891 | 5_2:-12358880 | Msa0757480:CDS |
| AAGTCTTCTCGACATGAACC+AGG | 0.568362 | 5_2:-12358845 | Msa0757480:CDS |
| ATCAATGTAGTAGGCAGGCT+AGG | 0.571773 | 5_2:-12358015 | Msa0757480:CDS |
| CTGCCAAAGCTGTTACAACA+GGG | 0.573595 | 5_2:+12358344 | None:intergenic |
| AATAAAATTCTTCAGTAAAG+GGG | 0.573615 | 5_2:+12358551 | None:intergenic |
| GTAGGCAGGCTAGGAAAGCA+AGG | 0.576577 | 5_2:-12358006 | Msa0757480:CDS |
| TTGAAATGATAACTTCTCGT+TGG | 0.583800 | 5_2:+12358242 | None:intergenic |
| GCAAGATATATGGAACAAGA+AGG | 0.585118 | 5_2:-12358794 | Msa0757480:CDS |
| CTCTTGGAGAAGGAATTCAA+GGG | 0.594491 | 5_2:-12359787 | Msa0757480:CDS |
| TTAAGGATTTCAAGGAAACC+GGG | 0.601773 | 5_2:-12358576 | Msa0757480:CDS |
| AAGAGAGTTGATCACCCTGT+TGG | 0.602591 | 5_2:+12358924 | None:intergenic |
| ATCTCACAAGAGATTGAAGA+GGG | 0.605669 | 5_2:-12358443 | Msa0757480:CDS |
| CCAGAATTTCAGAACTACGT+TGG | 0.612046 | 5_2:+12359757 | None:intergenic |
| TGATCAACTCTCTTGCTCAA+GGG | 0.622317 | 5_2:-12358915 | Msa0757480:CDS |
| CATGAACCAGGAAGTTGTCA+AGG | 0.624194 | 5_2:-12358833 | Msa0757480:CDS |
| CAAAGCTGTTACAACAGGGG+GGG | 0.635120 | 5_2:+12358348 | None:intergenic |
| TGTTGGTACTAAAATTGCAC+TGG | 0.637667 | 5_2:-12358215 | Msa0757480:CDS |
| AATCTCACAAGAGATTGAAG+AGG | 0.640781 | 5_2:-12358444 | Msa0757480:CDS |
| CATTCAGGAGCGCACCAACA+GGG | 0.641177 | 5_2:-12358938 | Msa0757480:CDS |
| GGGTGCGCATTCTCTTTATG+CGG | 0.642050 | 5_2:-12359025 | Msa0757480:CDS |
| TGGTACTAAAATTGCACTGG+TGG | 0.644582 | 5_2:-12358212 | Msa0757480:CDS |
| AGAAATTGCAGCTGCCACCA+CGG | 0.646219 | 5_2:+12358372 | None:intergenic |
| AGGTTCAAAATGGAGTTGAA+GGG | 0.659181 | 5_2:-12358627 | Msa0757480:CDS |
| AAAATCAGCAGTTTGCACCA+TGG | 0.662189 | 5_2:+12358138 | None:intergenic |
| TGCCAAAGCTGTTACAACAG+GGG | 0.670839 | 5_2:+12358345 | None:intergenic |
| CCAAAGCTGTTACAACAGGG+GGG | 0.689883 | 5_2:+12358347 | None:intergenic |
| GGCTAGGAAAGCAAGGACAG+TGG | 0.694536 | 5_2:-12357999 | Msa0757480:CDS |
| TAAGGATTTCAAGGAAACCG+GGG | 0.696914 | 5_2:-12358575 | Msa0757480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGCTAAAAAAATTTATACCT+GGG | + | chr5_2:12358177-12358196 | None:intergenic | 20.0% |
| !! | TAGCTAAAAAAATTTATACC+TGG | + | chr5_2:12358178-12358197 | None:intergenic | 20.0% |
| !!! | AAAGATTGAAACTTTGATTT+TGG | - | chr5_2:12358230-12358249 | Msa0757480:CDS | 20.0% |
| !!! | AAGATTGAAACTTTGATTTT+GGG | - | chr5_2:12358231-12358250 | Msa0757480:CDS | 20.0% |
| !! | AACCAAATTTCAAAATTAGA+AGG | + | chr5_2:12358444-12358463 | None:intergenic | 20.0% |
| !!! | ATAATTGATTTTTACATGTC+TGG | - | chr5_2:12358523-12358542 | Msa0757480:CDS | 20.0% |
| !! | AATAAAATTCTTCAGTAAAG+GGG | + | chr5_2:12359354-12359373 | None:intergenic | 20.0% |
| !! | GAATAAAATTCTTCAGTAAA+GGG | + | chr5_2:12359355-12359374 | None:intergenic | 20.0% |
| !! | AGCTAAAAAAATTTATACCT+GGG | + | chr5_2:12358177-12358196 | None:intergenic | 20.0% |
| !! | TAGCTAAAAAAATTTATACC+TGG | + | chr5_2:12358178-12358197 | None:intergenic | 20.0% |
| !!! | AAAGATTGAAACTTTGATTT+TGG | - | chr5_2:12358230-12358249 | Msa0757480:CDS | 20.0% |
| !!! | AAGATTGAAACTTTGATTTT+GGG | - | chr5_2:12358231-12358250 | Msa0757480:CDS | 20.0% |
| !! | AACCAAATTTCAAAATTAGA+AGG | + | chr5_2:12358444-12358463 | None:intergenic | 20.0% |
| !!! | ATAATTGATTTTTACATGTC+TGG | - | chr5_2:12358523-12358542 | Msa0757480:CDS | 20.0% |
| !! | AATAAAATTCTTCAGTAAAG+GGG | + | chr5_2:12359354-12359373 | None:intergenic | 20.0% |
| !! | GAATAAAATTCTTCAGTAAA+GGG | + | chr5_2:12359355-12359374 | None:intergenic | 20.0% |
| ! | ACTGCAAAAATTGAAGTAAA+GGG | + | chr5_2:12358089-12358108 | None:intergenic | 25.0% |
| ! | AACTGCAAAAATTGAAGTAA+AGG | + | chr5_2:12358090-12358109 | None:intergenic | 25.0% |
| !!! | AGCCTTCTAATTTTGAAATT+TGG | - | chr5_2:12358439-12358458 | Msa0757480:CDS | 25.0% |
| !! | TTGAAATTTGGTTTAGTGTA+TGG | - | chr5_2:12358451-12358470 | Msa0757480:CDS | 25.0% |
| ! | CGAATAAAATTCTTCAGTAA+AGG | + | chr5_2:12359356-12359375 | None:intergenic | 25.0% |
| !!! | ATTTTATTCGTTGTTTCAGT+CGG | - | chr5_2:12359366-12359385 | Msa0757480:intron | 25.0% |
| ! | GAAAATAAAGATTGAATCCA+TGG | - | chr5_2:12359747-12359766 | Msa0757480:CDS | 25.0% |
| ! | ACTGCAAAAATTGAAGTAAA+GGG | + | chr5_2:12358089-12358108 | None:intergenic | 25.0% |
| ! | AACTGCAAAAATTGAAGTAA+AGG | + | chr5_2:12358090-12358109 | None:intergenic | 25.0% |
| !!! | AGCCTTCTAATTTTGAAATT+TGG | - | chr5_2:12358439-12358458 | Msa0757480:CDS | 25.0% |
| !! | TTGAAATTTGGTTTAGTGTA+TGG | - | chr5_2:12358451-12358470 | Msa0757480:CDS | 25.0% |
| ! | CGAATAAAATTCTTCAGTAA+AGG | + | chr5_2:12359356-12359375 | None:intergenic | 25.0% |
| !!! | ATTTTATTCGTTGTTTCAGT+CGG | - | chr5_2:12359366-12359385 | Msa0757480:intron | 25.0% |
| ! | GAAAATAAAGATTGAATCCA+TGG | - | chr5_2:12359747-12359766 | Msa0757480:CDS | 25.0% |
| !! | TTTTTGCAGTTGTTTTCTCT+TGG | - | chr5_2:12358099-12358118 | Msa0757480:CDS | 30.0% |
| TTCAATTGAGAAGACACAAA+AGG | + | chr5_2:12358300-12358319 | None:intergenic | 30.0% | |
| !! | GAGGCAAAAATTGATTTTTG+AGG | - | chr5_2:12358497-12358516 | Msa0757480:CDS | 30.0% |
| !!! | TGTCTCTACACATTGATTTT+TGG | - | chr5_2:12358596-12358615 | Msa0757480:CDS | 30.0% |
| AATGTAATGTGGCTTAAGTT+TGG | + | chr5_2:12358662-12358681 | None:intergenic | 30.0% | |
| GAGTTGAATTGAATGTAATG+TGG | + | chr5_2:12358673-12358692 | None:intergenic | 30.0% | |
| !!! | AATGACTTGTTTTGATGAAG+AGG | - | chr5_2:12359255-12359274 | Msa0757480:intron | 30.0% |
| TTTGATGAAGAGGTTCAAAA+TGG | - | chr5_2:12359265-12359284 | Msa0757480:intron | 30.0% | |
| ACTTATGTAAAGACGTTGAA+AGG | - | chr5_2:12359301-12359320 | Msa0757480:intron | 30.0% | |
| CTTATGTAAAGACGTTGAAA+GGG | - | chr5_2:12359302-12359321 | Msa0757480:intron | 30.0% | |
| !! | AAATACGAGACAGCTTTAAA+GGG | - | chr5_2:12359637-12359656 | Msa0757480:intron | 30.0% |
| TTGAAATGATAACTTCTCGT+TGG | + | chr5_2:12359663-12359682 | None:intergenic | 30.0% | |
| GTTATCATTTCAATGCATGT+TGG | - | chr5_2:12359670-12359689 | Msa0757480:intron | 30.0% | |
| ! | TGGTGGATATGAATAACATT+CGG | - | chr5_2:12359707-12359726 | Msa0757480:intron | 30.0% |
| !! | TTTTTGCAGTTGTTTTCTCT+TGG | - | chr5_2:12358099-12358118 | Msa0757480:CDS | 30.0% |
| TTCAATTGAGAAGACACAAA+AGG | + | chr5_2:12358300-12358319 | None:intergenic | 30.0% | |
| !! | GAGGCAAAAATTGATTTTTG+AGG | - | chr5_2:12358497-12358516 | Msa0757480:CDS | 30.0% |
| !!! | TGTCTCTACACATTGATTTT+TGG | - | chr5_2:12358596-12358615 | Msa0757480:CDS | 30.0% |
| AATGTAATGTGGCTTAAGTT+TGG | + | chr5_2:12358662-12358681 | None:intergenic | 30.0% | |
| GAGTTGAATTGAATGTAATG+TGG | + | chr5_2:12358673-12358692 | None:intergenic | 30.0% | |
| !!! | AATGACTTGTTTTGATGAAG+AGG | - | chr5_2:12359255-12359274 | Msa0757480:intron | 30.0% |
| TTTGATGAAGAGGTTCAAAA+TGG | - | chr5_2:12359265-12359284 | Msa0757480:intron | 30.0% | |
| ACTTATGTAAAGACGTTGAA+AGG | - | chr5_2:12359301-12359320 | Msa0757480:intron | 30.0% | |
| CTTATGTAAAGACGTTGAAA+GGG | - | chr5_2:12359302-12359321 | Msa0757480:intron | 30.0% | |
| !! | AAATACGAGACAGCTTTAAA+GGG | - | chr5_2:12359637-12359656 | Msa0757480:intron | 30.0% |
| TTGAAATGATAACTTCTCGT+TGG | + | chr5_2:12359663-12359682 | None:intergenic | 30.0% | |
| GTTATCATTTCAATGCATGT+TGG | - | chr5_2:12359670-12359689 | Msa0757480:intron | 30.0% | |
| ! | TGGTGGATATGAATAACATT+CGG | - | chr5_2:12359707-12359726 | Msa0757480:intron | 30.0% |
| TAGCCATAGATCTCTATCTA+AGG | - | chr5_2:12358047-12358066 | Msa0757480:CDS | 35.0% | |
| GAACCTTAGATAGAGATCTA+TGG | + | chr5_2:12358053-12358072 | None:intergenic | 35.0% | |
| !! | TCAATTGAAGTATTGCCTTG+TGG | - | chr5_2:12358311-12358330 | Msa0757480:CDS | 35.0% |
| !! | TTTTGAGAGTTGAGACTTGT+TGG | - | chr5_2:12358387-12358406 | Msa0757480:CDS | 35.0% |
| AATTAGAAGGCTACAAGCAA+TGG | + | chr5_2:12358431-12358450 | None:intergenic | 35.0% | |
| ! | GGTATTGCTTAGTTCACTTT+TGG | - | chr5_2:12358472-12358491 | Msa0757480:CDS | 35.0% |
| !! | ATTGCTTAGTTCACTTTTGG+AGG | - | chr5_2:12358475-12358494 | Msa0757480:CDS | 35.0% |
| TCTATTGGGACTGTGAAATT+GGG | - | chr5_2:12358792-12358811 | Msa0757480:CDS | 35.0% | |
| GCAAGATATATGGAACAAGA+AGG | - | chr5_2:12359108-12359127 | Msa0757480:intron | 35.0% | |
| CATTACAAAACTCCAATGTC+TGG | + | chr5_2:12359180-12359199 | None:intergenic | 35.0% | |
| AGGTTCAAAATGGAGTTGAA+GGG | - | chr5_2:12359275-12359294 | Msa0757480:intron | 35.0% | |
| CTTAAGGATTTCAAGGAAAC+CGG | - | chr5_2:12359325-12359344 | Msa0757480:intron | 35.0% | |
| TTAAGGATTTCAAGGAAACC+GGG | - | chr5_2:12359326-12359345 | Msa0757480:intron | 35.0% | |
| AATCTCACAAGAGATTGAAG+AGG | - | chr5_2:12359458-12359477 | Msa0757480:intron | 35.0% | |
| ATCTCACAAGAGATTGAAGA+GGG | - | chr5_2:12359459-12359478 | Msa0757480:intron | 35.0% | |
| ! | CATTTTCCAAATGAGCCTAT+TGG | + | chr5_2:12359598-12359617 | None:intergenic | 35.0% |
| CAATAGGCTCATTTGGAAAA+TGG | - | chr5_2:12359596-12359615 | Msa0757480:intron | 35.0% | |
| ! | GAAATACGAGACAGCTTTAA+AGG | - | chr5_2:12359636-12359655 | Msa0757480:intron | 35.0% |
| TGTTGGTACTAAAATTGCAC+TGG | - | chr5_2:12359687-12359706 | Msa0757480:intron | 35.0% | |
| GGTGGATATGAATAACATTC+GGG | - | chr5_2:12359708-12359727 | Msa0757480:intron | 35.0% | |
| ! | TGATTTTGCTCTTGGAAATG+AGG | - | chr5_2:12359780-12359799 | Msa0757480:CDS | 35.0% |
| TAGCCATAGATCTCTATCTA+AGG | - | chr5_2:12358047-12358066 | Msa0757480:CDS | 35.0% | |
| GAACCTTAGATAGAGATCTA+TGG | + | chr5_2:12358053-12358072 | None:intergenic | 35.0% | |
| !! | TCAATTGAAGTATTGCCTTG+TGG | - | chr5_2:12358311-12358330 | Msa0757480:CDS | 35.0% |
| !! | TTTTGAGAGTTGAGACTTGT+TGG | - | chr5_2:12358387-12358406 | Msa0757480:CDS | 35.0% |
| AATTAGAAGGCTACAAGCAA+TGG | + | chr5_2:12358431-12358450 | None:intergenic | 35.0% | |
| ! | GGTATTGCTTAGTTCACTTT+TGG | - | chr5_2:12358472-12358491 | Msa0757480:CDS | 35.0% |
| !! | ATTGCTTAGTTCACTTTTGG+AGG | - | chr5_2:12358475-12358494 | Msa0757480:CDS | 35.0% |
| TCTATTGGGACTGTGAAATT+GGG | - | chr5_2:12358792-12358811 | Msa0757480:CDS | 35.0% | |
| GCAAGATATATGGAACAAGA+AGG | - | chr5_2:12359108-12359127 | Msa0757480:intron | 35.0% | |
| CATTACAAAACTCCAATGTC+TGG | + | chr5_2:12359180-12359199 | None:intergenic | 35.0% | |
| AGGTTCAAAATGGAGTTGAA+GGG | - | chr5_2:12359275-12359294 | Msa0757480:intron | 35.0% | |
| CTTAAGGATTTCAAGGAAAC+CGG | - | chr5_2:12359325-12359344 | Msa0757480:intron | 35.0% | |
| TTAAGGATTTCAAGGAAACC+GGG | - | chr5_2:12359326-12359345 | Msa0757480:intron | 35.0% | |
| AATCTCACAAGAGATTGAAG+AGG | - | chr5_2:12359458-12359477 | Msa0757480:intron | 35.0% | |
| ATCTCACAAGAGATTGAAGA+GGG | - | chr5_2:12359459-12359478 | Msa0757480:intron | 35.0% | |
| ! | CATTTTCCAAATGAGCCTAT+TGG | + | chr5_2:12359598-12359617 | None:intergenic | 35.0% |
| CAATAGGCTCATTTGGAAAA+TGG | - | chr5_2:12359596-12359615 | Msa0757480:intron | 35.0% | |
| ! | GAAATACGAGACAGCTTTAA+AGG | - | chr5_2:12359636-12359655 | Msa0757480:intron | 35.0% |
| TGTTGGTACTAAAATTGCAC+TGG | - | chr5_2:12359687-12359706 | Msa0757480:intron | 35.0% | |
| GGTGGATATGAATAACATTC+GGG | - | chr5_2:12359708-12359727 | Msa0757480:intron | 35.0% | |
| ! | TGATTTTGCTCTTGGAAATG+AGG | - | chr5_2:12359780-12359799 | Msa0757480:CDS | 35.0% |
| !! | CAGTTGTTTTCTCTTGGAGA+AGG | - | chr5_2:12358105-12358124 | Msa0757480:CDS | 40.0% |
| TCTCTTGGAGAAGGAATTCA+AGG | - | chr5_2:12358114-12358133 | Msa0757480:CDS | 40.0% | |
| CTCTTGGAGAAGGAATTCAA+GGG | - | chr5_2:12358115-12358134 | Msa0757480:CDS | 40.0% | |
| CCAGAATTTCAGAACTACGT+TGG | + | chr5_2:12358148-12358167 | None:intergenic | 40.0% | |
| !! | CCAACGTAGTTCTGAAATTC+TGG | - | chr5_2:12358145-12358164 | Msa0757480:CDS | 40.0% |
| CATGCTCAATTTCATCCACA+AGG | + | chr5_2:12358329-12358348 | None:intergenic | 40.0% | |
| ! | ACCACACACACTAACCATTT+TGG | - | chr5_2:12358756-12358775 | Msa0757480:CDS | 40.0% |
| ACCAAAATGGTTAGTGTGTG+TGG | + | chr5_2:12358760-12358779 | None:intergenic | 40.0% | |
| !! | AGAGCTAAGAAGCACCAAAA+TGG | + | chr5_2:12358773-12358792 | None:intergenic | 40.0% |
| ! | GTGCTTCTTAGCTCTCTATT+GGG | - | chr5_2:12358778-12358797 | Msa0757480:CDS | 40.0% |
| CTCTATTGGGACTGTGAAAT+TGG | - | chr5_2:12358791-12358810 | Msa0757480:CDS | 40.0% | |
| TGATCAACTCTCTTGCTCAA+GGG | - | chr5_2:12358987-12359006 | Msa0757480:CDS | 40.0% | |
| TCTATATCGCTTGAGTCACT+AGG | - | chr5_2:12359022-12359041 | Msa0757480:CDS | 40.0% | |
| TGGACTGCAAGCAAGATATA+TGG | - | chr5_2:12359098-12359117 | Msa0757480:intron | 40.0% | |
| GAGGTTCAAAATGGAGTTGA+AGG | - | chr5_2:12359274-12359293 | Msa0757480:intron | 40.0% | |
| AAAGACGTTGAAAGGGCTTA+AGG | - | chr5_2:12359309-12359328 | Msa0757480:intron | 40.0% | |
| GAAAGGGCTTAAGGATTTCA+AGG | - | chr5_2:12359318-12359337 | Msa0757480:intron | 40.0% | |
| TAAGGATTTCAAGGAAACCG+GGG | - | chr5_2:12359327-12359346 | Msa0757480:intron | 40.0% | |
| TGGTACTAAAATTGCACTGG+TGG | - | chr5_2:12359690-12359709 | Msa0757480:intron | 40.0% | |
| AAAATCAGCAGTTTGCACCA+TGG | + | chr5_2:12359767-12359786 | None:intergenic | 40.0% | |
| !!! | CAAACTGCTGATTTTGCTCT+TGG | - | chr5_2:12359772-12359791 | Msa0757480:CDS | 40.0% |
| TGCAAGCTGATCAATGTAGT+AGG | - | chr5_2:12359878-12359897 | Msa0757480:CDS | 40.0% | |
| !! | CAGTTGTTTTCTCTTGGAGA+AGG | - | chr5_2:12358105-12358124 | Msa0757480:CDS | 40.0% |
| TCTCTTGGAGAAGGAATTCA+AGG | - | chr5_2:12358114-12358133 | Msa0757480:CDS | 40.0% | |
| CTCTTGGAGAAGGAATTCAA+GGG | - | chr5_2:12358115-12358134 | Msa0757480:CDS | 40.0% | |
| CCAGAATTTCAGAACTACGT+TGG | + | chr5_2:12358148-12358167 | None:intergenic | 40.0% | |
| !! | CCAACGTAGTTCTGAAATTC+TGG | - | chr5_2:12358145-12358164 | Msa0757480:CDS | 40.0% |
| CATGCTCAATTTCATCCACA+AGG | + | chr5_2:12358329-12358348 | None:intergenic | 40.0% | |
| ! | ACCACACACACTAACCATTT+TGG | - | chr5_2:12358756-12358775 | Msa0757480:CDS | 40.0% |
| ACCAAAATGGTTAGTGTGTG+TGG | + | chr5_2:12358760-12358779 | None:intergenic | 40.0% | |
| !! | AGAGCTAAGAAGCACCAAAA+TGG | + | chr5_2:12358773-12358792 | None:intergenic | 40.0% |
| ! | GTGCTTCTTAGCTCTCTATT+GGG | - | chr5_2:12358778-12358797 | Msa0757480:CDS | 40.0% |
| CTCTATTGGGACTGTGAAAT+TGG | - | chr5_2:12358791-12358810 | Msa0757480:CDS | 40.0% | |
| TGATCAACTCTCTTGCTCAA+GGG | - | chr5_2:12358987-12359006 | Msa0757480:CDS | 40.0% | |
| TCTATATCGCTTGAGTCACT+AGG | - | chr5_2:12359022-12359041 | Msa0757480:CDS | 40.0% | |
| TGGACTGCAAGCAAGATATA+TGG | - | chr5_2:12359098-12359117 | Msa0757480:intron | 40.0% | |
| GAGGTTCAAAATGGAGTTGA+AGG | - | chr5_2:12359274-12359293 | Msa0757480:intron | 40.0% | |
| AAAGACGTTGAAAGGGCTTA+AGG | - | chr5_2:12359309-12359328 | Msa0757480:intron | 40.0% | |
| GAAAGGGCTTAAGGATTTCA+AGG | - | chr5_2:12359318-12359337 | Msa0757480:intron | 40.0% | |
| TAAGGATTTCAAGGAAACCG+GGG | - | chr5_2:12359327-12359346 | Msa0757480:intron | 40.0% | |
| TGGTACTAAAATTGCACTGG+TGG | - | chr5_2:12359690-12359709 | Msa0757480:intron | 40.0% | |
| AAAATCAGCAGTTTGCACCA+TGG | + | chr5_2:12359767-12359786 | None:intergenic | 40.0% | |
| !!! | CAAACTGCTGATTTTGCTCT+TGG | - | chr5_2:12359772-12359791 | Msa0757480:CDS | 40.0% |
| TGCAAGCTGATCAATGTAGT+AGG | - | chr5_2:12359878-12359897 | Msa0757480:CDS | 40.0% | |
| ! | TGAAATTCTGGCTGAAACCC+AGG | - | chr5_2:12358157-12358176 | Msa0757480:CDS | 45.0% |
| !! | GCTTAGTTCACTTTTGGAGG+AGG | - | chr5_2:12358478-12358497 | Msa0757480:CDS | 45.0% |
| ! | TTAGTGTGTGTGGTTCTGCA+AGG | + | chr5_2:12358750-12358769 | None:intergenic | 45.0% |
| ! | GGTGCTTCTTAGCTCTCTAT+TGG | - | chr5_2:12358777-12358796 | Msa0757480:CDS | 45.0% |
| TTGGGACTGTGAAATTGGGA+TGG | - | chr5_2:12358796-12358815 | Msa0757480:CDS | 45.0% | |
| TGGGACTGTGAAATTGGGAT+GGG | - | chr5_2:12358797-12358816 | Msa0757480:CDS | 45.0% | |
| GTTAGAATTAGTCCCCTTGC+TGG | + | chr5_2:12358831-12358850 | None:intergenic | 45.0% | |
| !! | TGTCCCAACACCGATTCAAA+TGG | - | chr5_2:12358856-12358875 | Msa0757480:CDS | 45.0% |
| !! | GTCCCAACACCGATTCAAAT+GGG | - | chr5_2:12358857-12358876 | Msa0757480:CDS | 45.0% |
| ! | CACCCATTTGAATCGGTGTT+GGG | + | chr5_2:12358862-12358881 | None:intergenic | 45.0% |
| GAATGCGCACCCATTTGAAT+CGG | + | chr5_2:12358869-12358888 | None:intergenic | 45.0% | |
| GCATCGAAGGATTGCAAGTT+TGG | + | chr5_2:12358941-12358960 | None:intergenic | 45.0% | |
| ATCCTTCGATGCTACCATTC+AGG | - | chr5_2:12358949-12358968 | Msa0757480:CDS | 45.0% | |
| ! | AAGAGAGTTGATCACCCTGT+TGG | + | chr5_2:12358981-12359000 | None:intergenic | 45.0% |
| GTGATCAACTCTCTTGCTCA+AGG | - | chr5_2:12358986-12359005 | Msa0757480:CDS | 45.0% | |
| GAGTCACTAGGAGAAGTTAC+CGG | - | chr5_2:12359034-12359053 | Msa0757480:CDS | 45.0% | |
| GTTCATGTCGAGAAGACTTC+CGG | + | chr5_2:12359056-12359075 | None:intergenic | 45.0% | |
| AAGTCTTCTCGACATGAACC+AGG | - | chr5_2:12359057-12359076 | Msa0757480:CDS | 45.0% | |
| CATGAACCAGGAAGTTGTCA+AGG | - | chr5_2:12359069-12359088 | Msa0757480:CDS | 45.0% | |
| GAATGACCTTGACAACTTCC+TGG | + | chr5_2:12359078-12359097 | None:intergenic | 45.0% | |
| GGAAGTTGTCAAGGTCATTC+TGG | - | chr5_2:12359078-12359097 | Msa0757480:intron | 45.0% | |
| CTCGAAAAAATCCTCCACCA+AGG | + | chr5_2:12359149-12359168 | None:intergenic | 45.0% | |
| CGAGAATAGTCTCCAGACAT+TGG | - | chr5_2:12359165-12359184 | Msa0757480:intron | 45.0% | |
| !!! | AGCTGTGTTGATTTTCTCCG+TGG | - | chr5_2:12359513-12359532 | Msa0757480:intron | 45.0% |
| !!! | TGTGTTGATTTTCTCCGTGG+TGG | - | chr5_2:12359516-12359535 | Msa0757480:intron | 45.0% |
| TGCCAAAGCTGTTACAACAG+GGG | + | chr5_2:12359560-12359579 | None:intergenic | 45.0% | |
| CTGCCAAAGCTGTTACAACA+GGG | + | chr5_2:12359561-12359580 | None:intergenic | 45.0% | |
| ! | CTGTTGTAACAGCTTTGGCA+GGG | - | chr5_2:12359560-12359579 | Msa0757480:intron | 45.0% |
| ! | TGTTGTAACAGCTTTGGCAG+GGG | - | chr5_2:12359561-12359580 | Msa0757480:intron | 45.0% |
| GCTGTTCCAATAGGCTCATT+TGG | - | chr5_2:12359589-12359608 | Msa0757480:intron | 45.0% | |
| AGCTGATCAATGTAGTAGGC+AGG | - | chr5_2:12359882-12359901 | Msa0757480:CDS | 45.0% | |
| ATCAATGTAGTAGGCAGGCT+AGG | - | chr5_2:12359887-12359906 | Msa0757480:CDS | 45.0% | |
| ! | TGAAATTCTGGCTGAAACCC+AGG | - | chr5_2:12358157-12358176 | Msa0757480:CDS | 45.0% |
| !! | GCTTAGTTCACTTTTGGAGG+AGG | - | chr5_2:12358478-12358497 | Msa0757480:CDS | 45.0% |
| ! | TTAGTGTGTGTGGTTCTGCA+AGG | + | chr5_2:12358750-12358769 | None:intergenic | 45.0% |
| ! | GGTGCTTCTTAGCTCTCTAT+TGG | - | chr5_2:12358777-12358796 | Msa0757480:CDS | 45.0% |
| TTGGGACTGTGAAATTGGGA+TGG | - | chr5_2:12358796-12358815 | Msa0757480:CDS | 45.0% | |
| TGGGACTGTGAAATTGGGAT+GGG | - | chr5_2:12358797-12358816 | Msa0757480:CDS | 45.0% | |
| GTTAGAATTAGTCCCCTTGC+TGG | + | chr5_2:12358831-12358850 | None:intergenic | 45.0% | |
| !! | TGTCCCAACACCGATTCAAA+TGG | - | chr5_2:12358856-12358875 | Msa0757480:CDS | 45.0% |
| !! | GTCCCAACACCGATTCAAAT+GGG | - | chr5_2:12358857-12358876 | Msa0757480:CDS | 45.0% |
| ! | CACCCATTTGAATCGGTGTT+GGG | + | chr5_2:12358862-12358881 | None:intergenic | 45.0% |
| GAATGCGCACCCATTTGAAT+CGG | + | chr5_2:12358869-12358888 | None:intergenic | 45.0% | |
| GCATCGAAGGATTGCAAGTT+TGG | + | chr5_2:12358941-12358960 | None:intergenic | 45.0% | |
| ATCCTTCGATGCTACCATTC+AGG | - | chr5_2:12358949-12358968 | Msa0757480:CDS | 45.0% | |
| ! | AAGAGAGTTGATCACCCTGT+TGG | + | chr5_2:12358981-12359000 | None:intergenic | 45.0% |
| GTGATCAACTCTCTTGCTCA+AGG | - | chr5_2:12358986-12359005 | Msa0757480:CDS | 45.0% | |
| GAGTCACTAGGAGAAGTTAC+CGG | - | chr5_2:12359034-12359053 | Msa0757480:CDS | 45.0% | |
| GTTCATGTCGAGAAGACTTC+CGG | + | chr5_2:12359056-12359075 | None:intergenic | 45.0% | |
| AAGTCTTCTCGACATGAACC+AGG | - | chr5_2:12359057-12359076 | Msa0757480:CDS | 45.0% | |
| CATGAACCAGGAAGTTGTCA+AGG | - | chr5_2:12359069-12359088 | Msa0757480:CDS | 45.0% | |
| GAATGACCTTGACAACTTCC+TGG | + | chr5_2:12359078-12359097 | None:intergenic | 45.0% | |
| GGAAGTTGTCAAGGTCATTC+TGG | - | chr5_2:12359078-12359097 | Msa0757480:intron | 45.0% | |
| CTCGAAAAAATCCTCCACCA+AGG | + | chr5_2:12359149-12359168 | None:intergenic | 45.0% | |
| CGAGAATAGTCTCCAGACAT+TGG | - | chr5_2:12359165-12359184 | Msa0757480:intron | 45.0% | |
| !!! | AGCTGTGTTGATTTTCTCCG+TGG | - | chr5_2:12359513-12359532 | Msa0757480:intron | 45.0% |
| !!! | TGTGTTGATTTTCTCCGTGG+TGG | - | chr5_2:12359516-12359535 | Msa0757480:intron | 45.0% |
| TGCCAAAGCTGTTACAACAG+GGG | + | chr5_2:12359560-12359579 | None:intergenic | 45.0% | |
| CTGCCAAAGCTGTTACAACA+GGG | + | chr5_2:12359561-12359580 | None:intergenic | 45.0% | |
| ! | CTGTTGTAACAGCTTTGGCA+GGG | - | chr5_2:12359560-12359579 | Msa0757480:intron | 45.0% |
| ! | TGTTGTAACAGCTTTGGCAG+GGG | - | chr5_2:12359561-12359580 | Msa0757480:intron | 45.0% |
| GCTGTTCCAATAGGCTCATT+TGG | - | chr5_2:12359589-12359608 | Msa0757480:intron | 45.0% | |
| AGCTGATCAATGTAGTAGGC+AGG | - | chr5_2:12359882-12359901 | Msa0757480:CDS | 45.0% | |
| ATCAATGTAGTAGGCAGGCT+AGG | - | chr5_2:12359887-12359906 | Msa0757480:CDS | 45.0% | |
| GACTGTGAAATTGGGATGGG+AGG | - | chr5_2:12358800-12358819 | Msa0757480:CDS | 50.0% | |
| GCACCCATTTGAATCGGTGT+TGG | + | chr5_2:12358863-12358882 | None:intergenic | 50.0% | |
| GGGTGCGCATTCTCTTTATG+CGG | - | chr5_2:12358877-12358896 | Msa0757480:CDS | 50.0% | |
| ! | CTCCTGAATGGTAGCATCGA+AGG | + | chr5_2:12358954-12358973 | None:intergenic | 50.0% |
| CTCTCTTGCTCAAGGGATTG+AGG | - | chr5_2:12358994-12359013 | Msa0757480:CDS | 50.0% | |
| !! | GGATCGTGACTTGTTCTCCT+TGG | - | chr5_2:12359129-12359148 | Msa0757480:intron | 50.0% |
| !! | TCGTGACTTGTTCTCCTTGG+TGG | - | chr5_2:12359132-12359151 | Msa0757480:intron | 50.0% |
| !! | TGACTTGTTCTCCTTGGTGG+AGG | - | chr5_2:12359135-12359154 | Msa0757480:intron | 50.0% |
| !! | AGCGCGCGAAAAACTTGTTG+CGG | - | chr5_2:12359222-12359241 | Msa0757480:intron | 50.0% |
| TTCTTCAGTAAAGGGGTCCC+CGG | + | chr5_2:12359347-12359366 | None:intergenic | 50.0% | |
| AGAAATTGCAGCTGCCACCA+CGG | + | chr5_2:12359533-12359552 | None:intergenic | 50.0% | |
| CAAAGCTGTTACAACAGGGG+GGG | + | chr5_2:12359557-12359576 | None:intergenic | 50.0% | |
| CCAAAGCTGTTACAACAGGG+GGG | + | chr5_2:12359558-12359577 | None:intergenic | 50.0% | |
| GCCAAAGCTGTTACAACAGG+GGG | + | chr5_2:12359559-12359578 | None:intergenic | 50.0% | |
| CCTGCCAAAGCTGTTACAAC+AGG | + | chr5_2:12359562-12359581 | None:intergenic | 50.0% | |
| ! | CCTGTTGTAACAGCTTTGGC+AGG | - | chr5_2:12359559-12359578 | Msa0757480:intron | 50.0% |
| GACTGTGAAATTGGGATGGG+AGG | - | chr5_2:12358800-12358819 | Msa0757480:CDS | 50.0% | |
| GCACCCATTTGAATCGGTGT+TGG | + | chr5_2:12358863-12358882 | None:intergenic | 50.0% | |
| GGGTGCGCATTCTCTTTATG+CGG | - | chr5_2:12358877-12358896 | Msa0757480:CDS | 50.0% | |
| ! | CTCCTGAATGGTAGCATCGA+AGG | + | chr5_2:12358954-12358973 | None:intergenic | 50.0% |
| CTCTCTTGCTCAAGGGATTG+AGG | - | chr5_2:12358994-12359013 | Msa0757480:CDS | 50.0% | |
| !! | GGATCGTGACTTGTTCTCCT+TGG | - | chr5_2:12359129-12359148 | Msa0757480:intron | 50.0% |
| !! | TCGTGACTTGTTCTCCTTGG+TGG | - | chr5_2:12359132-12359151 | Msa0757480:intron | 50.0% |
| !! | TGACTTGTTCTCCTTGGTGG+AGG | - | chr5_2:12359135-12359154 | Msa0757480:intron | 50.0% |
| !! | AGCGCGCGAAAAACTTGTTG+CGG | - | chr5_2:12359222-12359241 | Msa0757480:intron | 50.0% |
| TTCTTCAGTAAAGGGGTCCC+CGG | + | chr5_2:12359347-12359366 | None:intergenic | 50.0% | |
| AGAAATTGCAGCTGCCACCA+CGG | + | chr5_2:12359533-12359552 | None:intergenic | 50.0% | |
| CAAAGCTGTTACAACAGGGG+GGG | + | chr5_2:12359557-12359576 | None:intergenic | 50.0% | |
| CCAAAGCTGTTACAACAGGG+GGG | + | chr5_2:12359558-12359577 | None:intergenic | 50.0% | |
| GCCAAAGCTGTTACAACAGG+GGG | + | chr5_2:12359559-12359578 | None:intergenic | 50.0% | |
| CCTGCCAAAGCTGTTACAAC+AGG | + | chr5_2:12359562-12359581 | None:intergenic | 50.0% | |
| ! | CCTGTTGTAACAGCTTTGGC+AGG | - | chr5_2:12359559-12359578 | Msa0757480:intron | 50.0% |
| ATGGGAGGTCAGTCCAGCAA+GGG | - | chr5_2:12358815-12358834 | Msa0757480:CDS | 55.0% | |
| ! | CATTCAGGAGCGCACCAACA+GGG | - | chr5_2:12358964-12358983 | Msa0757480:CDS | 55.0% |
| CCCCCCTGTTGTAACAGCTT+TGG | - | chr5_2:12359555-12359574 | Msa0757480:intron | 55.0% | |
| ! | AACAGCTTTGGCAGGGGCAT+TGG | - | chr5_2:12359567-12359586 | Msa0757480:intron | 55.0% |
| !! | GGGGCATTGGCTGTTCCAAT+AGG | - | chr5_2:12359580-12359599 | Msa0757480:intron | 55.0% |
| GTAGGCAGGCTAGGAAAGCA+AGG | - | chr5_2:12359896-12359915 | Msa0757480:CDS | 55.0% | |
| GGCTAGGAAAGCAAGGACAG+TGG | - | chr5_2:12359903-12359922 | Msa0757480:CDS | 55.0% | |
| ATGGGAGGTCAGTCCAGCAA+GGG | - | chr5_2:12358815-12358834 | Msa0757480:CDS | 55.0% | |
| ! | CATTCAGGAGCGCACCAACA+GGG | - | chr5_2:12358964-12358983 | Msa0757480:CDS | 55.0% |
| CCCCCCTGTTGTAACAGCTT+TGG | - | chr5_2:12359555-12359574 | Msa0757480:intron | 55.0% | |
| ! | AACAGCTTTGGCAGGGGCAT+TGG | - | chr5_2:12359567-12359586 | Msa0757480:intron | 55.0% |
| !! | GGGGCATTGGCTGTTCCAAT+AGG | - | chr5_2:12359580-12359599 | Msa0757480:intron | 55.0% |
| GTAGGCAGGCTAGGAAAGCA+AGG | - | chr5_2:12359896-12359915 | Msa0757480:CDS | 55.0% | |
| GGCTAGGAAAGCAAGGACAG+TGG | - | chr5_2:12359903-12359922 | Msa0757480:CDS | 55.0% | |
| GATGGGAGGTCAGTCCAGCA+AGG | - | chr5_2:12358814-12358833 | Msa0757480:CDS | 60.0% | |
| TGGGAGGTCAGTCCAGCAAG+GGG | - | chr5_2:12358816-12358835 | Msa0757480:CDS | 60.0% | |
| CCTGTTGGTGCGCTCCTGAA+TGG | + | chr5_2:12358966-12358985 | None:intergenic | 60.0% | |
| ! | CCATTCAGGAGCGCACCAAC+AGG | - | chr5_2:12358963-12358982 | Msa0757480:CDS | 60.0% |
| GATGGGAGGTCAGTCCAGCA+AGG | - | chr5_2:12358814-12358833 | Msa0757480:CDS | 60.0% | |
| TGGGAGGTCAGTCCAGCAAG+GGG | - | chr5_2:12358816-12358835 | Msa0757480:CDS | 60.0% | |
| CCTGTTGGTGCGCTCCTGAA+TGG | + | chr5_2:12358966-12358985 | None:intergenic | 60.0% | |
| ! | CCATTCAGGAGCGCACCAAC+AGG | - | chr5_2:12358963-12358982 | Msa0757480:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 12357967 | 12359957 | 12357967 | ID=Msa0757480;Name=Msa0757480 |
| chr5_2 | mRNA | 12357967 | 12359957 | 12357967 | ID=Msa0757480-mRNA-1;Parent=Msa0757480;Name=Msa0757480-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|1|1|1|2|0|445 |
| chr5_2 | exon | 12359746 | 12359957 | 12359746 | ID=Msa0757480-mRNA-1:exon:5542;Parent=Msa0757480-mRNA-1 |
| chr5_2 | exon | 12357967 | 12359092 | 12357967 | ID=Msa0757480-mRNA-1:exon:5541;Parent=Msa0757480-mRNA-1 |
| chr5_2 | CDS | 12359746 | 12359957 | 12359746 | ID=Msa0757480-mRNA-1:cds;Parent=Msa0757480-mRNA-1 |
| chr5_2 | CDS | 12357967 | 12359092 | 12357967 | ID=Msa0757480-mRNA-1:cds;Parent=Msa0757480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
