AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0759300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0759300 MtrunA17_Chr5g0407171 96.845 951 30 0 1 951 1 951 0.0 1898
Msa0759300 MtrunA17_Chr8g0370261 72.276 927 254 2 1 926 1 925 0.0 1406
Msa0759300 MtrunA17_Chr3g0144141 56.608 908 373 8 4 909 53 941 0.0 1059
Msa0759300 MtrunA17_Chr2g0322691 52.632 893 407 6 26 907 32 919 0.0 956
Msa0759300 MtrunA17_Chr8g0370281 57.316 827 337 8 94 911 1 820 0.0 954
Msa0759300 MtrunA17_Chr2g0322681 44.027 904 484 9 1 897 10 898 0.0 820
Msa0759300 MtrunA17_Chr3g0136611 34.971 855 521 23 31 863 35 876 9.50e-151 471
Msa0759300 MtrunA17_Chr3g0136621 34.004 894 534 24 1 863 13 881 2.47e-150 470
Msa0759300 MtrunA17_Chr4g0046101 31.131 893 531 26 5 872 19 852 9.94e-118 382
Msa0759300 MtrunA17_Chr2g0283231 28.061 980 588 32 1 941 11 912 6.53e-104 345
Msa0759300 MtrunA17_Chr2g0283241 27.231 863 533 25 26 867 31 819 3.74e-87 299
Msa0759300 MtrunA17_Chr2g0283261 27.835 873 522 29 32 874 39 833 1.15e-85 295
Msa0759300 MtrunA17_Chr5g0424541 28.425 876 526 29 28 862 36 851 2.68e-81 283
Msa0759300 MtrunA17_Chr7g0230081 26.945 887 520 30 28 862 48 858 3.96e-74 263
Msa0759300 MtrunA17_Chr7g0230091 30.590 644 355 21 242 862 6 580 5.98e-74 256
Msa0759300 MtrunA17_Chr5g0424521 27.941 748 441 23 94 803 3 690 1.33e-69 245
Msa0759300 MtrunA17_Chr2g0283251 26.248 781 478 25 25 779 32 740 4.24e-62 226
Msa0759300 MtrunA17_Chr2g0283211 27.133 586 331 16 208 784 32 530 7.95e-55 199
Msa0759300 MtrunA17_Chr6g0467751 32.000 400 250 10 472 851 46 443 6.04e-49 181
Msa0759300 MtrunA17_Chr5g0424621 27.042 551 336 20 28 555 36 543 2.57e-34 139
Msa0759300 MtrunA17_Chr8g0370291 39.286 112 67 1 1 112 1 111 8.57e-21 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0759300 AT3G51480.4 57.802 910 370 5 5 913 3 899 0.0 1113
Msa0759300 AT3G51480.1 57.802 910 370 5 5 913 3 899 0.0 1113
Msa0759300 AT1G42540.1 57.516 918 368 9 23 931 21 925 0.0 1076
Msa0759300 AT1G42540.4 57.516 918 368 9 23 931 21 925 0.0 1076
Msa0759300 AT1G42540.2 57.516 918 368 9 23 931 21 925 0.0 1076
Msa0759300 AT3G51480.2 59.440 821 320 4 94 913 1 809 0.0 1036
Msa0759300 AT4G35290.4 52.832 918 415 8 5 914 3 910 0.0 990
Msa0759300 AT4G35290.3 52.832 918 415 8 5 914 3 910 0.0 990
Msa0759300 AT4G35290.1 52.832 918 415 8 5 914 3 910 0.0 990
Msa0759300 AT4G35290.2 52.832 918 415 8 5 914 3 910 0.0 990
Msa0759300 AT4G35290.5 52.832 918 415 8 5 914 3 910 0.0 990
Msa0759300 AT2G17260.1 53.736 910 399 12 5 904 7 904 0.0 962
Msa0759300 AT3G51480.3 58.194 775 311 4 5 779 3 764 0.0 955
Msa0759300 AT1G05200.6 52.781 881 398 5 28 897 57 930 0.0 935
Msa0759300 AT1G05200.2 52.781 881 398 5 28 897 57 930 0.0 935
Msa0759300 AT1G05200.1 52.781 881 398 5 28 897 57 930 0.0 935
Msa0759300 AT2G32390.5 50.853 879 426 5 32 905 48 925 0.0 890
Msa0759300 AT4G35290.6 54.557 779 340 6 5 779 3 771 0.0 860
Msa0759300 AT2G32390.2 51.707 820 391 4 91 905 4 823 0.0 848
Msa0759300 AT2G32390.1 51.526 819 392 4 92 905 49 867 0.0 846
Msa0759300 AT1G05200.7 54.847 753 332 3 28 779 57 802 0.0 837
Msa0759300 AT1G05200.3 54.847 753 332 3 28 779 57 802 0.0 837
Msa0759300 AT2G32400.1 43.468 888 479 9 25 902 24 898 0.0 750
Msa0759300 AT1G42540.3 56.960 625 258 6 23 643 21 638 0.0 731
Msa0759300 AT2G32390.6 51.691 621 299 1 32 652 48 667 0.0 674
Msa0759300 AT1G05200.4 52.657 621 287 2 28 648 57 670 0.0 666
Msa0759300 AT2G32390.4 50.809 618 303 1 32 649 48 664 0.0 661
Msa0759300 AT2G32390.3 50.809 618 303 1 32 649 48 664 0.0 661
Msa0759300 AT1G05200.5 52.224 607 283 2 28 634 57 656 0.0 645
Msa0759300 AT2G32390.7 50.249 603 299 1 32 634 48 649 0.0 636
Msa0759300 AT5G11180.2 34.379 861 536 17 32 881 36 878 2.12e-154 481
Msa0759300 AT5G27100.1 33.639 871 515 22 32 873 32 868 9.20e-154 477
Msa0759300 AT2G29100.2 35.261 882 519 25 32 900 32 874 3.60e-153 476
Msa0759300 AT2G29100.1 35.261 882 519 25 32 900 30 872 3.80e-153 476
Msa0759300 AT2G29120.1 32.751 916 558 24 32 933 39 910 2.08e-151 472
Msa0759300 AT2G29110.1 35.337 832 498 17 32 852 33 835 2.31e-151 472
Msa0759300 AT2G29110.2 35.337 832 498 17 32 852 34 836 2.55e-151 472
Msa0759300 AT5G11210.5 34.409 837 505 20 32 851 37 846 1.59e-150 469
Msa0759300 AT5G11210.1 35.331 801 475 19 68 851 14 788 1.97e-150 467
Msa0759300 AT5G11210.9 35.484 775 459 17 93 851 15 764 3.20e-150 466
Msa0759300 AT2G24720.1 34.837 798 481 17 32 815 32 804 6.01e-146 457
Msa0759300 AT4G31710.1 34.321 810 482 20 21 817 21 793 6.27e-145 454
Msa0759300 AT4G31710.2 33.951 810 478 20 21 817 44 809 2.89e-142 447
Msa0759300 AT5G11210.3 36.170 705 410 16 90 779 20 699 3.64e-139 433
Msa0759300 AT5G11210.2 34.207 763 461 17 32 779 37 773 1.17e-138 434
Msa0759300 AT5G11210.4 34.207 763 461 17 32 779 37 773 1.17e-138 434
Msa0759300 AT5G11210.10 34.207 763 461 17 32 779 37 773 1.17e-138 434
Msa0759300 AT5G11210.8 36.040 702 409 16 93 779 15 691 1.82e-138 431
Msa0759300 AT5G11210.7 36.040 702 409 16 93 779 15 691 2.24e-138 431
Msa0759300 AT5G11210.6 36.040 702 409 16 93 779 15 691 2.24e-138 431
Msa0759300 AT2G24710.1 31.818 858 544 18 43 882 42 876 4.19e-136 430
Msa0759300 AT2G24710.3 31.818 858 544 18 43 882 66 900 5.46e-136 431
Msa0759300 AT2G24710.2 32.932 747 471 14 43 779 66 792 1.38e-127 405
Msa0759300 AT5G11180.1 31.279 860 503 19 32 881 36 817 6.65e-119 385
Msa0759300 AT3G07520.1 27.354 892 553 24 5 864 12 840 1.97e-93 315
Msa0759300 AT5G48400.2 28.402 845 519 24 32 859 40 815 4.93e-92 311
Msa0759300 AT5G48410.1 27.305 846 542 22 32 869 42 822 3.09e-88 301
Msa0759300 AT5G48400.1 28.889 765 460 23 32 779 40 737 5.45e-86 292
Msa0759300 AT5G48410.2 28.042 756 473 21 32 779 42 734 3.51e-83 285
Msa0759300 AT3G04110.1 26.043 887 549 24 6 870 4 805 6.21e-80 277
Msa0759300 AT5G48410.4 26.228 835 516 23 32 858 42 784 8.11e-75 263
Msa0759300 AT3G04110.3 26.624 785 481 22 6 779 4 704 3.46e-72 254
Msa0759300 AT5G48410.3 25.988 835 514 23 32 858 42 780 8.98e-72 254
Msa0759300 AT5G11210.11 37.574 338 198 6 522 851 6 338 2.48e-68 234
Msa0759300 AT3G04110.2 24.577 887 534 24 6 870 4 777 5.69e-67 240

Find 225 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCAGAAGTTGGATATTT+TGG 0.108501 5_2:-14852715 None:intergenic
TGAAAACATGTGAGAAATTT+TGG 0.147502 5_2:-14852619 None:intergenic
GGTTTGGAATTAAGCGTTTC+TGG 0.173785 5_2:-14854926 None:intergenic
TAAGCTTTCAATGCCTTTAA+TGG 0.174089 5_2:-14856305 None:intergenic
CTGAGCATCATAATCTTTAT+TGG 0.204930 5_2:-14857230 None:intergenic
TCGCGACACTAAACACTTTC+GGG 0.205568 5_2:-14854343 None:intergenic
TACAAATCCCCAGCCGTTTC+TGG 0.207905 5_2:-14856566 None:intergenic
TCTTTCTTTGTTCCTACTTT+TGG 0.219865 5_2:+14852880 Msa0759300:five_prime_UTR
TTGGTCTTGCCCAGAATATT+TGG 0.222757 5_2:-14853523 None:intergenic
TTTAAGCATTGTGGAGAAAA+TGG 0.225840 5_2:-14852856 None:intergenic
AACTATTTAATCCAAGAAAT+TGG 0.226487 5_2:+14856376 Msa0759300:CDS
AACCACATCCTTGGTGTAAA+TGG 0.226841 5_2:-14855489 None:intergenic
TGGAACTGTTGTTTGGATTT+TGG 0.227168 5_2:+14855539 Msa0759300:CDS
ACTCATCAATACCAATTTCT+TGG 0.229387 5_2:-14856387 None:intergenic
GGCTTCTGAGCTGTGTTTCC+AGG 0.230286 5_2:-14854995 None:intergenic
TTGTCAAAGTGGTGTAATTA+TGG 0.235490 5_2:+14857305 Msa0759300:exon
GGCATTGAAAGCTTAGTAAT+TGG 0.241024 5_2:+14856313 Msa0759300:CDS
AAAGAAAGTTTGTTTCTAAA+TGG 0.241296 5_2:+14854519 Msa0759300:CDS
CCATATGGAATAAACTTATA+AGG 0.245835 5_2:-14855181 None:intergenic
TGTTGCATGAAAGTGTTAAT+TGG 0.279976 5_2:-14857481 None:intergenic
CCTTATAAGTTTATTCCATA+TGG 0.280340 5_2:+14855181 Msa0759300:CDS
GCTCCAATATTTACAATATC+AGG 0.286846 5_2:-14853421 None:intergenic
AAATTCGGATCCAAATATTC+TGG 0.296117 5_2:+14853513 Msa0759300:CDS
CCTGAAGTTATTGCCTGGTT+TGG 0.296388 5_2:-14854942 None:intergenic
AGGCCTGATATTGTAAATAT+TGG 0.301238 5_2:+14853418 Msa0759300:CDS
CAGATCGAAAAGAAAGAAAA+TGG 0.306142 5_2:+14857159 Msa0759300:CDS
AAGCTTTCAATGCCTTTAAT+GGG 0.306277 5_2:-14856304 None:intergenic
ATCTCCTCTGCAGTTGCTTC+GGG 0.310294 5_2:-14854248 None:intergenic
AGACACAATGTGGCAATAAT+TGG 0.319777 5_2:+14853924 Msa0759300:CDS
AAGACATACCTTAGAGCTTC+AGG 0.319955 5_2:-14852957 None:intergenic
TTCGCGACACTAAACACTTT+CGG 0.325739 5_2:-14854344 None:intergenic
TGAGATTCTGCAACGCTTCT+CGG 0.330906 5_2:-14854207 None:intergenic
ACTTGTTCACTTCCATCATT+AGG 0.336868 5_2:-14857280 None:intergenic
ATTGTCTACCATTTGCAAAA+TGG 0.336897 5_2:-14856846 None:intergenic
AAATGCTATTCCCTGTGATT+TGG 0.337239 5_2:+14854972 Msa0759300:CDS
TATCTCCTCTGCAGTTGCTT+CGG 0.342196 5_2:-14854249 None:intergenic
CTAGTTTCTGTCTCCCTAAC+AGG 0.342346 5_2:-14855447 None:intergenic
GTAGTTCACGCCAACACTAT+TGG 0.344238 5_2:+14854317 Msa0759300:CDS
ATCATCAATGTGGTTGGAAC+CGG 0.347020 5_2:+14854851 Msa0759300:CDS
TAGTGGTAGTAGCACCTGTT+AGG 0.348845 5_2:+14855433 Msa0759300:CDS
ACTAAACCAGACTCAATATA+TGG 0.349812 5_2:-14855414 None:intergenic
ATACAACCATGGTTAAAGTT+TGG 0.351589 5_2:+14853329 Msa0759300:exon
TAGTTCACGCCAACACTATT+GGG 0.355308 5_2:+14854318 Msa0759300:CDS
GTCGTTGTGTGCTACTTATA+TGG 0.356677 5_2:+14856203 Msa0759300:CDS
TAATAGTTGGAACTGTTGTT+TGG 0.358247 5_2:+14855532 Msa0759300:CDS
ATGATCCTGAGCTAGGGTTT+TGG 0.360519 5_2:-14857081 None:intergenic
AGTGCTCTAGCAGCTTCTTC+AGG 0.368684 5_2:-14856433 None:intergenic
AGCTCAGAAGCCTCGCGGTT+GGG 0.374479 5_2:+14855006 Msa0759300:CDS
TGGTGTAAATGGAGCCAAAA+AGG 0.374511 5_2:-14855478 None:intergenic
GAAAATACAGTGAGCACATT+TGG 0.377522 5_2:+14856181 Msa0759300:CDS
GCAGACCTTGTTGACTACTA+TGG 0.377656 5_2:+14854107 Msa0759300:CDS
CTTGAGAAGGGTCCTCAAAA+TGG 0.382532 5_2:+14856454 Msa0759300:CDS
CGGTGTAAATTTACTATTGT+AGG 0.385414 5_2:+14856532 Msa0759300:CDS
CTTATAAGTTTATTCCATAT+GGG 0.389021 5_2:+14855182 Msa0759300:CDS
TTTAGTGTCGCGAAGAATCT+TGG 0.392243 5_2:+14854353 Msa0759300:CDS
CAAGAAGATTCTAAGTATAG+AGG 0.393980 5_2:+14853562 Msa0759300:CDS
CATTTACAATTCTAAGCTAC+TGG 0.399527 5_2:+14852912 Msa0759300:five_prime_UTR
GGTCTCGGAGGATCGGTTAT+TGG 0.400571 5_2:+14854873 Msa0759300:CDS
ATATCCTTCCTGAAGCTCTA+AGG 0.401191 5_2:+14852949 Msa0759300:five_prime_UTR
GATAACAAATGTGCTAGTTC+AGG 0.402634 5_2:+14854268 Msa0759300:CDS
ACTCAGCCATATATTGAGTC+TGG 0.404527 5_2:+14855408 Msa0759300:CDS
CTCTCCCTGAAGTTATTGCC+TGG 0.405725 5_2:-14854947 None:intergenic
CCAAACCAGGCAATAACTTC+AGG 0.406252 5_2:+14854942 Msa0759300:CDS
CTTAATAGCCTTCCATTGTT+CGG 0.407638 5_2:-14855034 None:intergenic
ATAATCTTTATTGGAGATGA+TGG 0.413687 5_2:-14857221 None:intergenic
GTTTCATTATTTCTTGACTT+TGG 0.413832 5_2:-14852497 None:intergenic
TTTAGGAAATACAACTTGCC+TGG 0.417467 5_2:+14857375 Msa0759300:three_prime_UTR
CGCGAAGAATCTTGGAATGA+TGG 0.420925 5_2:+14854361 Msa0759300:CDS
GTATATATTGATGATGATAA+TGG 0.422978 5_2:+14854149 Msa0759300:CDS
CGGACAAGCTCGGTGTTACT+AGG 0.423128 5_2:-14855220 None:intergenic
AGGAACGGAATTGGTGCATT+AGG 0.427427 5_2:+14854173 Msa0759300:CDS
CATATGGAATAAACTTATAA+GGG 0.429868 5_2:-14855180 None:intergenic
GGCTTCTCTTCAACTGTGGT+TGG 0.431482 5_2:+14853379 Msa0759300:CDS
TCACAGTGATCTTTATCAAA+TGG 0.431568 5_2:+14854076 Msa0759300:CDS
TTTGCAAAATGGCAGTTGAT+AGG 0.431842 5_2:-14856835 None:intergenic
TGGCGGTAACTAACGCCTAT+TGG 0.432370 5_2:-14855067 None:intergenic
TGACAAGTTCTGATAAAGAA+TGG 0.432372 5_2:-14854056 None:intergenic
AATCATTTGAGAATGTGATT+TGG 0.434174 5_2:-14854664 None:intergenic
CTATTCCCTGTGATTTGGCC+TGG 0.435796 5_2:+14854977 Msa0759300:CDS
AACTTATAAGGGACAGCATA+AGG 0.436939 5_2:-14855169 None:intergenic
TGCGGTGAACGATGTAAATT+CGG 0.437111 5_2:+14853498 Msa0759300:CDS
CTGGTACTTGCGAGACAAAT+TGG 0.437291 5_2:-14855087 None:intergenic
CAACTTCTGAGGAGTGTGAT+TGG 0.440361 5_2:+14852725 Msa0759300:five_prime_UTR
CGCGTGCTGTCAACACTCCT+TGG 0.443293 5_2:-14854472 None:intergenic
ATATATTGAGTCTGGTTTAG+TGG 0.447740 5_2:+14855416 Msa0759300:CDS
TGCAAAGGATTCATGACAAA+TGG 0.448961 5_2:+14856876 Msa0759300:CDS
GCTGATTCTGTTCCTAATGA+TGG 0.450656 5_2:+14857268 Msa0759300:CDS
ACGCGTGCACACGCCAGATT+CGG 0.452627 5_2:+14854490 Msa0759300:CDS
CAATTTGTCTCGCAAGTACC+AGG 0.453271 5_2:+14855088 Msa0759300:CDS
AAGGGACAGCATAAGGCAAT+AGG 0.454426 5_2:-14855162 None:intergenic
GAAAGTGGAGAAGTTAATCA+AGG 0.456253 5_2:-14852819 None:intergenic
GGAGACAGAAACTAGTGCTT+TGG 0.456942 5_2:+14855455 Msa0759300:CDS
TTGTTCTTACCATCCCCATA+TGG 0.461876 5_2:-14855196 None:intergenic
GATCTGCGGATCAGCATGTT+TGG 0.466699 5_2:+14856982 Msa0759300:CDS
GAACCTTGAGTGTAACCAAT+TGG 0.470774 5_2:-14856343 None:intergenic
TTGACATCTTCCTTGCAAAC+CGG 0.471040 5_2:+14856512 Msa0759300:CDS
GTAATTGGCAAAGAGCCAAT+TGG 0.472111 5_2:+14856328 Msa0759300:CDS
GTACGGACAAGAGGGACAAT+TGG 0.472644 5_2:-14852659 None:intergenic
CCAGGCACAGATACATTTCA+AGG 0.476169 5_2:+14855106 Msa0759300:CDS
CTTGTCCGTCTGATAACAAC+TGG 0.476371 5_2:+14855235 Msa0759300:CDS
ATGTGGTTGGAACCGGGTCT+CGG 0.476531 5_2:+14854858 Msa0759300:CDS
AAACGTGATGATCCTGAGCT+AGG 0.478719 5_2:-14857088 None:intergenic
TTGAAGAGAGAGCTTTAACT+TGG 0.478917 5_2:-14853542 None:intergenic
ATTGCTAACGGTGAGTCTCT+TGG 0.481463 5_2:-14856809 None:intergenic
CAATCACACTCCTCAGAAGT+TGG 0.482973 5_2:-14852724 None:intergenic
AATACTGATAGTGGCCCTCT+TGG 0.485612 5_2:+14854560 Msa0759300:CDS
GCAGTTGCTTCGGGTCTCAC+AGG 0.488039 5_2:-14854239 None:intergenic
GACAAGTTCTGATAAAGAAT+GGG 0.488714 5_2:-14854055 None:intergenic
TGCAAGGAAGATGTCAATAT+AGG 0.490970 5_2:-14856506 None:intergenic
ACATTGATGATTTCATATGT+AGG 0.491964 5_2:-14854839 None:intergenic
GGTCAAGAGTTCACCAGAAA+CGG 0.492133 5_2:+14856553 Msa0759300:CDS
ACTCACGGAAATACTGATAG+TGG 0.495121 5_2:+14854551 Msa0759300:CDS
AATTCGGATCCAAATATTCT+GGG 0.495492 5_2:+14853514 Msa0759300:CDS
TGGGAATTGAAGTGAAGAAA+GGG 0.497041 5_2:-14854036 None:intergenic
CTTAGAATTGTAAATGAAGA+AGG 0.497459 5_2:-14852905 None:intergenic
TTAAGAATCGGAGTACCAAT+AGG 0.498180 5_2:+14855052 Msa0759300:CDS
CTCCATTTACACCAAGGATG+TGG 0.498261 5_2:+14855487 Msa0759300:CDS
AGCTGCTAGAGCACTTGAGA+AGG 0.498564 5_2:+14856441 Msa0759300:CDS
AAAGCTGAAAATGAGATAAG+AGG 0.499953 5_2:-14854005 None:intergenic
GATAATGGAAGGAACGGAAT+TGG 0.500398 5_2:+14854164 Msa0759300:CDS
GTGTTTCCAGGCCAAATCAC+AGG 0.500547 5_2:-14854983 None:intergenic
GAAAATGGACAAGGCACTAA+AGG 0.505355 5_2:-14852841 None:intergenic
AATGGAAGGCTATTAAGAAT+CGG 0.505552 5_2:+14855040 Msa0759300:CDS
ATCTCTTATAGAGGTAGTGA+GGG 0.507274 5_2:+14857187 Msa0759300:CDS
GATAATTGTCACTGTGAAAG+TGG 0.508548 5_2:-14852582 None:intergenic
TGATGGGCACTGGTTATGTA+TGG 0.510763 5_2:+14854378 Msa0759300:CDS
AAGAGTTCACCAGAAACGGC+TGG 0.511076 5_2:+14856557 Msa0759300:CDS
AGTGGTAGTAGCACCTGTTA+GGG 0.511309 5_2:+14855434 Msa0759300:CDS
CCTTGAAATGTATCTGTGCC+TGG 0.511367 5_2:-14855106 None:intergenic
CTCTACTAATATACTTCATA+CGG 0.511636 5_2:+14857008 Msa0759300:CDS
TATGAAATCATCAATGTGGT+TGG 0.513116 5_2:+14854845 Msa0759300:CDS
ATGGGAATTGAAGTGAAGAA+AGG 0.515929 5_2:-14854037 None:intergenic
AAGAAAGAGTTTAAGCATTG+TGG 0.517701 5_2:-14852865 None:intergenic
GTTAACATGACAGGTGTGAC+AGG 0.520717 5_2:+14854779 Msa0759300:CDS
CAATGGCTTCTCTTCAACTG+TGG 0.525200 5_2:+14853375 Msa0759300:CDS
AACGTGATGATCCTGAGCTA+GGG 0.531390 5_2:-14857087 None:intergenic
TATTATATATGCTATTTGCA+TGG 0.532849 5_2:-14857425 None:intergenic
GAATCAGCTATGCGTGGAGA+TGG 0.534793 5_2:-14857253 None:intergenic
GGAACCGGGTCTCGGAGGAT+CGG 0.535259 5_2:+14854866 Msa0759300:CDS
GGTTATTGGTCTAATCACTC+TGG 0.537000 5_2:+14854887 Msa0759300:CDS
CTTTCAATACTAGTGTTGGT+AGG 0.538929 5_2:+14853452 Msa0759300:CDS
AGAGTTCACCAGAAACGGCT+GGG 0.541125 5_2:+14856558 Msa0759300:CDS
CCTGACCAAAACCCTAGCTC+AGG 0.544007 5_2:+14857076 Msa0759300:CDS
TGAACAAGTATTTGTCAAAG+TGG 0.544044 5_2:+14857294 Msa0759300:CDS
TAAATTTACACCGGTTTGCA+AGG 0.544070 5_2:-14856522 None:intergenic
AAGTTTATTCCATATGGGGA+TGG 0.544461 5_2:+14855187 Msa0759300:CDS
CAGGAATTTGACGGTGCAGT+AGG 0.544564 5_2:+14855342 Msa0759300:intron
ATGGAGAGAATCTCTTATAG+AGG 0.548030 5_2:+14857178 Msa0759300:CDS
CAAACCAGGCAATAACTTCA+GGG 0.551751 5_2:+14854943 Msa0759300:CDS
GCGAAGAATCTTGGAATGAT+GGG 0.551860 5_2:+14854362 Msa0759300:CDS
TCCATTGCCTTCTGATGCAA+TGG 0.552390 5_2:+14854442 Msa0759300:CDS
TTAGGAAATACAACTTGCCT+GGG 0.553543 5_2:+14857376 Msa0759300:three_prime_UTR
GAGCCAATTGGTTACACTCA+AGG 0.554363 5_2:+14856340 Msa0759300:CDS
GCTGCTAGAGCACTTGAGAA+GGG 0.555149 5_2:+14856442 Msa0759300:CDS
AATCTCTTATAGAGGTAGTG+AGG 0.556154 5_2:+14857186 Msa0759300:CDS
GATGATGATAATGGAAGGAA+CGG 0.558018 5_2:+14854158 Msa0759300:CDS
CAGCTCAGAAGCCTCGCGGT+TGG 0.558518 5_2:+14855005 Msa0759300:CDS
GACAAGGCACTAAAGGAAAG+TGG 0.558982 5_2:-14852834 None:intergenic
ACCTTGTTGACTACTATGGA+TGG 0.559074 5_2:+14854111 Msa0759300:CDS
TTATAAGTTTATTCCATATG+GGG 0.559101 5_2:+14855183 Msa0759300:CDS
ATTTATGAAGTTAACATGAC+AGG 0.559107 5_2:+14854770 Msa0759300:CDS
AAATTATTTGTACGGACAAG+AGG 0.562235 5_2:-14852668 None:intergenic
TCATCAATGTGGTTGGAACC+GGG 0.562645 5_2:+14854852 Msa0759300:CDS
AATCTTGGAATGATGGGCAC+TGG 0.563222 5_2:+14854368 Msa0759300:CDS
AAAGTGGAGAAGTTAATCAA+GGG 0.564231 5_2:-14852818 None:intergenic
AGCTTTCAATGCCTTTAATG+GGG 0.571429 5_2:-14856303 None:intergenic
GCTGTGACAAACCACATCCT+TGG 0.572660 5_2:-14855498 None:intergenic
TAATAGCCAAACTTTAACCA+TGG 0.573491 5_2:-14853335 None:intergenic
GATGCATTGAACATATTCGA+TGG 0.575341 5_2:+14854725 Msa0759300:CDS
AAATTGGTATTGATGAGTCT+AGG 0.579574 5_2:+14856392 Msa0759300:CDS
AATAGCAGAAAGAAAAGCAG+TGG 0.580483 5_2:-14854405 None:intergenic
ATGAAGAAGGAACCAAAAGT+AGG 0.581073 5_2:-14852892 None:intergenic
TAGACAATGGGGACTTGCAA+AGG 0.588875 5_2:+14856861 Msa0759300:CDS
AACAAATGTGCTAGTTCAGG+TGG 0.591116 5_2:+14854271 Msa0759300:CDS
GCTCTAATGATTCTCTACAA+TGG 0.596281 5_2:+14853358 Msa0759300:CDS
ATTAAGCGTTTCTGGAGGAA+CGG 0.598918 5_2:-14854918 None:intergenic
AAATGGCAAAACTTGACTCA+CGG 0.603058 5_2:+14854536 Msa0759300:CDS
TCCATTGCATCAGAAGGCAA+TGG 0.606203 5_2:-14854443 None:intergenic
AGTAGAGCTTGTTTAACACA+AGG 0.608489 5_2:+14856905 Msa0759300:CDS
ATATCATCCATTGCATCAGA+AGG 0.609534 5_2:-14854449 None:intergenic
GAAACACAAACATCTTGTGA+TGG 0.609914 5_2:-14852525 None:intergenic
ATTGAAGTGAAGAAAGGGTA+GGG 0.610945 5_2:-14854031 None:intergenic
AGGGTGAATGATGAATTTAG+AGG 0.611358 5_2:+14855567 Msa0759300:CDS
AATTATTTGTACGGACAAGA+GGG 0.612764 5_2:-14852667 None:intergenic
TGTTATCAGACGGACAAGCT+CGG 0.614402 5_2:-14855230 None:intergenic
CTACAATAGTAAATTTACAC+CGG 0.615770 5_2:-14856531 None:intergenic
GAGTTCACCAGAAACGGCTG+GGG 0.618854 5_2:+14856559 Msa0759300:CDS
ATCTTTATTGGAGATGATGG+AGG 0.618940 5_2:-14857218 None:intergenic
AGTTCACGCCAACACTATTG+GGG 0.619321 5_2:+14854319 Msa0759300:CDS
ATAGGTAAATCATACAACCA+TGG 0.621935 5_2:+14853318 Msa0759300:intron
ATAACCGATCCTCCGAGACC+CGG 0.622653 5_2:-14854870 None:intergenic
AATTGAAGTGAAGAAAGGGT+AGG 0.623429 5_2:-14854032 None:intergenic
TCACACCAGTTGTTATCAGA+CGG 0.627621 5_2:-14855240 None:intergenic
ATATTGATGATGATAATGGA+AGG 0.628366 5_2:+14854153 Msa0759300:CDS
GAAACGCTTAATTCCAAACC+AGG 0.629860 5_2:+14854929 Msa0759300:CDS
GCTTTCAATGCCTTTAATGG+GGG 0.630168 5_2:-14856302 None:intergenic
TGTTTCCAGGCCAAATCACA+GGG 0.631591 5_2:-14854982 None:intergenic
TGAGCTGTTACAGAACTATG+AGG 0.636099 5_2:-14853948 None:intergenic
TCTTATAGAGGTAGTGAGGG+AGG 0.636380 5_2:+14857190 Msa0759300:CDS
TTTCATATGTAGGATTAACA+AGG 0.639032 5_2:-14854829 None:intergenic
TGGGGACTGTATGTGATCTG+CGG 0.641624 5_2:+14856968 Msa0759300:CDS
CATTGTGGAGAAAATGGACA+AGG 0.642314 5_2:-14852850 None:intergenic
GTACTTGCGAGACAAATTGG+CGG 0.642717 5_2:-14855084 None:intergenic
GTTGATAGGTCAATTGCTAA+CGG 0.645755 5_2:-14856821 None:intergenic
TCCATCCATAGTAGTCAACA+AGG 0.646917 5_2:-14854112 None:intergenic
GATGCAATGGATGATATCCA+AGG 0.647811 5_2:+14854455 Msa0759300:CDS
ATGGAGGAAACACATTGCGT+AGG 0.650471 5_2:+14854744 Msa0759300:CDS
GCCAAAATATCCAACTTCTG+AGG 0.651090 5_2:+14852714 Msa0759300:five_prime_UTR
GGAACAGAATCAGCTATGCG+TGG 0.652665 5_2:-14857259 None:intergenic
CATACCTTAGAGCTTCAGGA+AGG 0.662211 5_2:-14852953 None:intergenic
GAGACCCGAAGCAACTGCAG+AGG 0.663454 5_2:+14854244 Msa0759300:CDS
TTGGAATTAAGCGTTTCTGG+AGG 0.665412 5_2:-14854923 None:intergenic
TTTGCAAATGGTAGACAATG+GGG 0.667655 5_2:+14856850 Msa0759300:CDS
GTACATCAAGCACCGCTCAG+AGG 0.669416 5_2:+14857042 Msa0759300:CDS
TACATATGAAATCATCAATG+TGG 0.671358 5_2:+14854841 Msa0759300:CDS
GCATTGAACATATTCGATGG+AGG 0.674675 5_2:+14854728 Msa0759300:CDS
GAGAAGGGTCCTCAAAATGG+CGG 0.676519 5_2:+14856457 Msa0759300:CDS
TGGTTGGAACCGGGTCTCGG+AGG 0.677436 5_2:+14854861 Msa0759300:CDS
AAGAAAGCTGTTGTACTGTG+AGG 0.686762 5_2:-14856279 None:intergenic
GTTCACGCCAACACTATTGG+GGG 0.693725 5_2:+14854320 Msa0759300:CDS
GGTCATGGCTAGACACAATG+TGG 0.699792 5_2:+14853914 Msa0759300:CDS
TTGGCACTCATAATTCAACA+AGG 0.717953 5_2:+14853398 Msa0759300:CDS
AACACAGCTCAGAAGCCTCG+CGG 0.732843 5_2:+14855001 Msa0759300:CDS
TCAAAGTTATCTACACTACG+TGG 0.734230 5_2:+14854686 Msa0759300:CDS
GAGAATCAAGTTCCTCTGAG+CGG 0.762406 5_2:-14857054 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTCAAATTATTTGTA+CGG - chr5_2:14852679-14852698 None:intergenic 15.0%
!!! AAAGTTTTTTTTACTCTATA+TGG - chr5_2:14852778-14852797 None:intergenic 15.0%
!!! AAAATTATCATTGTTTTACA+AGG - chr5_2:14853649-14853668 None:intergenic 15.0%
!!! TTTAAGTCAAATCTTTTTTA+TGG - chr5_2:14853779-14853798 None:intergenic 15.0%
!! TTAAAAAAAAGGTTCAATAT+TGG - chr5_2:14855666-14855685 None:intergenic 15.0%
!! TTAAAACTAAAAATCATGTT+TGG - chr5_2:14855857-14855876 None:intergenic 15.0%
!!! GGTTTTGAATAAATTTATTT+TGG - chr5_2:14855951-14855970 None:intergenic 15.0%
!!! TCACATTAATTCTTTTAAAT+TGG - chr5_2:14856636-14856655 None:intergenic 15.0%
!!! TGGAATTTTATTAATTTCAT+GGG + chr5_2:14856684-14856703 Msa0759300:intron 15.0%
!!! TAAATGTACAAGTTTTATTT+AGG + chr5_2:14857358-14857377 Msa0759300:three_prime_UTR 15.0%
!!! TTTTTTATTAGCAGATACTT+TGG + chr5_2:14853066-14853085 Msa0759300:intron 20.0%
!!! AAATCTTTTTTATGGTCTAA+CGG - chr5_2:14853771-14853790 None:intergenic 20.0%
!!! ATAAGTGTAAATTTTTTGCA+CGG - chr5_2:14853844-14853863 None:intergenic 20.0%
!!! GTATATATTGATGATGATAA+TGG + chr5_2:14854149-14854168 Msa0759300:CDS 20.0%
!!! AAAGAAAGTTTGTTTCTAAA+TGG + chr5_2:14854519-14854538 Msa0759300:CDS 20.0%
!!! TTGATGCATTTTTTAAACAA+GGG + chr5_2:14854639-14854658 Msa0759300:CDS 20.0%
!! CATATGGAATAAACTTATAA+GGG - chr5_2:14855183-14855202 None:intergenic 20.0%
!! CTTATAAGTTTATTCCATAT+GGG + chr5_2:14855182-14855201 Msa0759300:CDS 20.0%
!! TTATAAGTTTATTCCATATG+GGG + chr5_2:14855183-14855202 Msa0759300:CDS 20.0%
!!! ATCATGTCAATAATCTTTTA+TGG + chr5_2:14855265-14855284 Msa0759300:intron 20.0%
!! CTGTATGAAAATTCAAAAAT+CGG - chr5_2:14855325-14855344 None:intergenic 20.0%
!!! ATAGTAACCATTTGTTTTTT+AGG - chr5_2:14855597-14855616 None:intergenic 20.0%
!!! AACAAATGGTTACTATTTTT+TGG + chr5_2:14855601-14855620 Msa0759300:CDS 20.0%
!!! CATTGATTTGGTTAAAAAAA+AGG - chr5_2:14855677-14855696 None:intergenic 20.0%
!!! AAATGGATTTTAACATGTTT+AGG + chr5_2:14855772-14855791 Msa0759300:intron 20.0%
!! AATGAAACTTGATTAATCAA+AGG - chr5_2:14856143-14856162 None:intergenic 20.0%
!! AACTATTTAATCCAAGAAAT+TGG + chr5_2:14856376-14856395 Msa0759300:CDS 20.0%
!! ACAATTTCTTGCAATAAAAT+TGG + chr5_2:14856610-14856629 Msa0759300:intron 20.0%
!!! CTGGAATTTTATTAATTTCA+TGG + chr5_2:14856683-14856702 Msa0759300:intron 20.0%
!!! TATTATATATGCTATTTGCA+TGG - chr5_2:14857428-14857447 None:intergenic 20.0%
!! GTTTCATTATTTCTTGACTT+TGG - chr5_2:14852500-14852519 None:intergenic 25.0%
!! TGAAAACATGTGAGAAATTT+TGG - chr5_2:14852622-14852641 None:intergenic 25.0%
! AAGAAAAAAAGACAAGAAGT+CGG + chr5_2:14852692-14852711 Msa0759300:five_prime_UTR 25.0%
!! CTATATGGTGTTGAAAAATA+TGG - chr5_2:14852763-14852782 None:intergenic 25.0%
! CTTAGAATTGTAAATGAAGA+AGG - chr5_2:14852908-14852927 None:intergenic 25.0%
!! TTTTGCATGAACAAAGATTT+TGG - chr5_2:14853192-14853211 None:intergenic 25.0%
!!! ATGCAAAATCTTGTTTTTCT+TGG + chr5_2:14853204-14853223 Msa0759300:intron 25.0%
!!! CTCTATGTCTATTGTTTTAT+AGG + chr5_2:14853300-14853319 Msa0759300:intron 25.0%
!! TTTTCTTTCAATACTAGTGT+TGG + chr5_2:14853448-14853467 Msa0759300:CDS 25.0%
!!! AAAAATTGCTTTAGAAGTTG+CGG + chr5_2:14853480-14853499 Msa0759300:CDS 25.0%
!! TATGTAATATACAGTTTTGC+AGG + chr5_2:14853893-14853912 Msa0759300:intron 25.0%
!!! ATATTGATGATGATAATGGA+AGG + chr5_2:14854153-14854172 Msa0759300:CDS 25.0%
!!! CTTGATGCATTTTTTAAACA+AGG + chr5_2:14854638-14854657 Msa0759300:CDS 25.0%
! AATCATTTGAGAATGTGATT+TGG - chr5_2:14854667-14854686 None:intergenic 25.0%
! ATTTATGAAGTTAACATGAC+AGG + chr5_2:14854770-14854789 Msa0759300:CDS 25.0%
! TTTCATATGTAGGATTAACA+AGG - chr5_2:14854832-14854851 None:intergenic 25.0%
!! ACATTGATGATTTCATATGT+AGG - chr5_2:14854842-14854861 None:intergenic 25.0%
! TACATATGAAATCATCAATG+TGG + chr5_2:14854841-14854860 Msa0759300:CDS 25.0%
! CCATATGGAATAAACTTATA+AGG - chr5_2:14855184-14855203 None:intergenic 25.0%
! CCTTATAAGTTTATTCCATA+TGG + chr5_2:14855181-14855200 Msa0759300:CDS 25.0%
!! CAATAATCTTTTATGGAGTT+TGG + chr5_2:14855272-14855291 Msa0759300:intron 25.0%
!! CGATTTTTGAATTTTCATAC+AGG + chr5_2:14855323-14855342 Msa0759300:intron 25.0%
!! ATTTTCATACAGGAATTTGA+CGG + chr5_2:14855333-14855352 Msa0759300:intron 25.0%
! TACTACAACAAGAACAAAAA+TGG + chr5_2:14855377-14855396 Msa0759300:CDS 25.0%
!!! ATGCATTATTAGCATTGATT+TGG - chr5_2:14855689-14855708 None:intergenic 25.0%
! TAACTTGAAGTTGAGATTAA+AGG + chr5_2:14855822-14855841 Msa0759300:intron 25.0%
! TTCATTTATCCATACTATGT+AGG + chr5_2:14856157-14856176 Msa0759300:intron 25.0%
! TCATTTATCCATACTATGTA+GGG + chr5_2:14856158-14856177 Msa0759300:intron 25.0%
! CTACAATAGTAAATTTACAC+CGG - chr5_2:14856534-14856553 None:intergenic 25.0%
!! TACATTTCAATTTTAGACTC+TGG - chr5_2:14856735-14856754 None:intergenic 25.0%
!! ACTCAAACTAAAAAGCTTTT+GGG + chr5_2:14856949-14856968 Msa0759300:CDS 25.0%
! CTCTACTAATATACTTCATA+CGG + chr5_2:14857008-14857027 Msa0759300:CDS 25.0%
! ATAATCTTTATTGGAGATGA+TGG - chr5_2:14857224-14857243 None:intergenic 25.0%
!!! CTTAAATTTATTTTCTTCCC+AGG - chr5_2:14857396-14857415 None:intergenic 25.0%
! AATTTCTCACATGTTTTCAG+TGG + chr5_2:14852623-14852642 Msa0759300:five_prime_UTR 30.0%
AATTATTTGTACGGACAAGA+GGG - chr5_2:14852670-14852689 None:intergenic 30.0%
AAATTATTTGTACGGACAAG+AGG - chr5_2:14852671-14852690 None:intergenic 30.0%
AAAGTGGAGAAGTTAATCAA+GGG - chr5_2:14852821-14852840 None:intergenic 30.0%
! TTTAAGCATTGTGGAGAAAA+TGG - chr5_2:14852859-14852878 None:intergenic 30.0%
! AAGAAAGAGTTTAAGCATTG+TGG - chr5_2:14852868-14852887 None:intergenic 30.0%
! TCTTTCTTTGTTCCTACTTT+TGG + chr5_2:14852880-14852899 Msa0759300:five_prime_UTR 30.0%
CATTTACAATTCTAAGCTAC+TGG + chr5_2:14852912-14852931 Msa0759300:five_prime_UTR 30.0%
! TTTTTGTCCTTTCACATGTT+AGG + chr5_2:14853012-14853031 Msa0759300:intron 30.0%
! TTTTGTCCTTTCACATGTTA+GGG + chr5_2:14853013-14853032 Msa0759300:intron 30.0%
! GCATAAGATAAAGCAGATTT+TGG - chr5_2:14853105-14853124 None:intergenic 30.0%
CATAACAACAACAAAGCAAA+GGG - chr5_2:14853273-14853292 None:intergenic 30.0%
ACATAACAACAACAAAGCAA+AGG - chr5_2:14853274-14853293 None:intergenic 30.0%
ATAGGTAAATCATACAACCA+TGG + chr5_2:14853318-14853337 Msa0759300:intron 30.0%
ATACAACCATGGTTAAAGTT+TGG + chr5_2:14853329-14853348 Msa0759300:exon 30.0%
TAATAGCCAAACTTTAACCA+TGG - chr5_2:14853338-14853357 None:intergenic 30.0%
AGGCCTGATATTGTAAATAT+TGG + chr5_2:14853418-14853437 Msa0759300:CDS 30.0%
GCTCCAATATTTACAATATC+AGG - chr5_2:14853424-14853443 None:intergenic 30.0%
AAATTCGGATCCAAATATTC+TGG + chr5_2:14853513-14853532 Msa0759300:CDS 30.0%
AATTCGGATCCAAATATTCT+GGG + chr5_2:14853514-14853533 Msa0759300:CDS 30.0%
CAAGAAGATTCTAAGTATAG+AGG + chr5_2:14853562-14853581 Msa0759300:CDS 30.0%
AAAGCTGAAAATGAGATAAG+AGG - chr5_2:14854008-14854027 None:intergenic 30.0%
! GACAAGTTCTGATAAAGAAT+GGG - chr5_2:14854058-14854077 None:intergenic 30.0%
! TGACAAGTTCTGATAAAGAA+TGG - chr5_2:14854059-14854078 None:intergenic 30.0%
TCACAGTGATCTTTATCAAA+TGG + chr5_2:14854076-14854095 Msa0759300:CDS 30.0%
ACAAAAAACTAAGTCCAAGA+GGG - chr5_2:14854577-14854596 None:intergenic 30.0%
! GGATTAACAAGGTTTTTATC+AGG - chr5_2:14854821-14854840 None:intergenic 30.0%
TATGAAATCATCAATGTGGT+TGG + chr5_2:14854845-14854864 Msa0759300:CDS 30.0%
AATGGAAGGCTATTAAGAAT+CGG + chr5_2:14855040-14855059 Msa0759300:CDS 30.0%
!! GGAGTTTGGATGTTTTATTA+TGG + chr5_2:14855286-14855305 Msa0759300:intron 30.0%
TACAACAAGAACAAAAATGG+TGG + chr5_2:14855380-14855399 Msa0759300:CDS 30.0%
ACTAAACCAGACTCAATATA+TGG - chr5_2:14855417-14855436 None:intergenic 30.0%
! ATATATTGAGTCTGGTTTAG+TGG + chr5_2:14855416-14855435 Msa0759300:CDS 30.0%
!! GCTCTCTTTTTCATAATAGT+TGG + chr5_2:14855519-14855538 Msa0759300:CDS 30.0%
TAATAGTTGGAACTGTTGTT+TGG + chr5_2:14855532-14855551 Msa0759300:CDS 30.0%
!!! GTAACCATTTGTTTTTTAGG+TGG - chr5_2:14855594-14855613 None:intergenic 30.0%
TAATGCATGCAATATTCATG+TGG + chr5_2:14855701-14855720 Msa0759300:intron 30.0%
! TCAAAACCAATTTTCGCTTA+TGG + chr5_2:14855963-14855982 Msa0759300:intron 30.0%
ATTCTACCATAAGCGAAAAT+TGG - chr5_2:14855972-14855991 None:intergenic 30.0%
TTGTTTGTGTTGTATTTGAC+AGG + chr5_2:14856034-14856053 Msa0759300:intron 30.0%
TATGTCATAGAAGACAGAAT+CGG - chr5_2:14856098-14856117 None:intergenic 30.0%
TCTGTCTTCTATGACATATA+TGG + chr5_2:14856100-14856119 Msa0759300:intron 30.0%
CATTTATCCATACTATGTAG+GGG + chr5_2:14856159-14856178 Msa0759300:intron 30.0%
AAGCTTTCAATGCCTTTAAT+GGG - chr5_2:14856307-14856326 None:intergenic 30.0%
TAAGCTTTCAATGCCTTTAA+TGG - chr5_2:14856308-14856327 None:intergenic 30.0%
ACTCATCAATACCAATTTCT+TGG - chr5_2:14856390-14856409 None:intergenic 30.0%
!! AAATTGGTATTGATGAGTCT+AGG + chr5_2:14856392-14856411 Msa0759300:CDS 30.0%
CGGTGTAAATTTACTATTGT+AGG + chr5_2:14856532-14856551 Msa0759300:CDS 30.0%
ATAAAATTCCAGAATCATGC+TGG - chr5_2:14856675-14856694 None:intergenic 30.0%
ATTGTCTACCATTTGCAAAA+TGG - chr5_2:14856849-14856868 None:intergenic 30.0%
! ATTTTGCAAATGGTAGACAA+TGG + chr5_2:14856848-14856867 Msa0759300:CDS 30.0%
! TTTTGCAAATGGTAGACAAT+GGG + chr5_2:14856849-14856868 Msa0759300:CDS 30.0%
! GACTCAAACTAAAAAGCTTT+TGG + chr5_2:14856948-14856967 Msa0759300:CDS 30.0%
! CTCAAACTAAAAAGCTTTTG+GGG + chr5_2:14856950-14856969 Msa0759300:CDS 30.0%
!! CTCTTCTTTTTCATCTACAA+AGG - chr5_2:14857128-14857147 None:intergenic 30.0%
CAGATCGAAAAGAAAGAAAA+TGG + chr5_2:14857159-14857178 Msa0759300:CDS 30.0%
CTGAGCATCATAATCTTTAT+TGG - chr5_2:14857233-14857252 None:intergenic 30.0%
TGAACAAGTATTTGTCAAAG+TGG + chr5_2:14857294-14857313 Msa0759300:CDS 30.0%
TTGTCAAAGTGGTGTAATTA+TGG + chr5_2:14857305-14857324 Msa0759300:exon 30.0%
!! TGTTGCATGAAAGTGTTAAT+TGG - chr5_2:14857484-14857503 None:intergenic 30.0%
GAAACACAAACATCTTGTGA+TGG - chr5_2:14852528-14852547 None:intergenic 35.0%
GATAATTGTCACTGTGAAAG+TGG - chr5_2:14852585-14852604 None:intergenic 35.0%
! TCCTCAGAAGTTGGATATTT+TGG - chr5_2:14852718-14852737 None:intergenic 35.0%
GAAAGTGGAGAAGTTAATCA+AGG - chr5_2:14852822-14852841 None:intergenic 35.0%
ATGAAGAAGGAACCAAAAGT+AGG - chr5_2:14852895-14852914 None:intergenic 35.0%
CAAAATCCCTAACATGTGAA+AGG - chr5_2:14853022-14853041 None:intergenic 35.0%
!!! CTTGGTGCTTTATGACTTTT+TGG + chr5_2:14853222-14853241 Msa0759300:intron 35.0%
GCTCTAATGATTCTCTACAA+TGG + chr5_2:14853358-14853377 Msa0759300:CDS 35.0%
TTGGCACTCATAATTCAACA+AGG + chr5_2:14853398-14853417 Msa0759300:CDS 35.0%
!! CTTTCAATACTAGTGTTGGT+AGG + chr5_2:14853452-14853471 Msa0759300:CDS 35.0%
! TTGAAGAGAGAGCTTTAACT+TGG - chr5_2:14853545-14853564 None:intergenic 35.0%
GGTTTATCAGCTCATGAAAA+GGG - chr5_2:14853628-14853647 None:intergenic 35.0%
AGGTTTATCAGCTCATGAAA+AGG - chr5_2:14853629-14853648 None:intergenic 35.0%
! ATATACAGTTTTGCAGGTCA+TGG + chr5_2:14853899-14853918 Msa0759300:intron 35.0%
AGACACAATGTGGCAATAAT+TGG + chr5_2:14853924-14853943 Msa0759300:CDS 35.0%
ATTGAAGTGAAGAAAGGGTA+GGG - chr5_2:14854034-14854053 None:intergenic 35.0%
AATTGAAGTGAAGAAAGGGT+AGG - chr5_2:14854035-14854054 None:intergenic 35.0%
TGGGAATTGAAGTGAAGAAA+GGG - chr5_2:14854039-14854058 None:intergenic 35.0%
ATGGGAATTGAAGTGAAGAA+AGG - chr5_2:14854040-14854059 None:intergenic 35.0%
!! GATGATGATAATGGAAGGAA+CGG + chr5_2:14854158-14854177 Msa0759300:CDS 35.0%
GATAACAAATGTGCTAGTTC+AGG + chr5_2:14854268-14854287 Msa0759300:CDS 35.0%
AATAGCAGAAAGAAAAGCAG+TGG - chr5_2:14854408-14854427 None:intergenic 35.0%
ATATCATCCATTGCATCAGA+AGG - chr5_2:14854452-14854471 None:intergenic 35.0%
! TTTCTTTTAAGCTCCGAATC+TGG - chr5_2:14854506-14854525 None:intergenic 35.0%
AAATGGCAAAACTTGACTCA+CGG + chr5_2:14854536-14854555 Msa0759300:CDS 35.0%
CACAAAAAACTAAGTCCAAG+AGG - chr5_2:14854578-14854597 None:intergenic 35.0%
TCAAAGTTATCTACACTACG+TGG + chr5_2:14854686-14854705 Msa0759300:CDS 35.0%
GATGCATTGAACATATTCGA+TGG + chr5_2:14854725-14854744 Msa0759300:CDS 35.0%
AAATGCTATTCCCTGTGATT+TGG + chr5_2:14854972-14854991 Msa0759300:CDS 35.0%
CTTAATAGCCTTCCATTGTT+CGG - chr5_2:14855037-14855056 None:intergenic 35.0%
! TTAAGAATCGGAGTACCAAT+AGG + chr5_2:14855052-14855071 Msa0759300:CDS 35.0%
AACTTATAAGGGACAGCATA+AGG - chr5_2:14855172-14855191 None:intergenic 35.0%
AAGTTTATTCCATATGGGGA+TGG + chr5_2:14855187-14855206 Msa0759300:CDS 35.0%
!! TGGAACTGTTGTTTGGATTT+TGG + chr5_2:14855539-14855558 Msa0759300:CDS 35.0%
!!! TTGTTTGGATTTTGGAGCAT+AGG + chr5_2:14855547-14855566 Msa0759300:CDS 35.0%
!!! TGTTTGGATTTTGGAGCATA+GGG + chr5_2:14855548-14855567 Msa0759300:CDS 35.0%
AGGGTGAATGATGAATTTAG+AGG + chr5_2:14855567-14855586 Msa0759300:CDS 35.0%
AGGACCACCTAAAAAACAAA+TGG + chr5_2:14855587-14855606 Msa0759300:CDS 35.0%
! GTATTTTCCCCTACATAGTA+TGG - chr5_2:14856169-14856188 None:intergenic 35.0%
GAAAATACAGTGAGCACATT+TGG + chr5_2:14856181-14856200 Msa0759300:CDS 35.0%
AGCTTTCAATGCCTTTAATG+GGG - chr5_2:14856306-14856325 None:intergenic 35.0%
! GGCATTGAAAGCTTAGTAAT+TGG + chr5_2:14856313-14856332 Msa0759300:CDS 35.0%
TGCAAGGAAGATGTCAATAT+AGG - chr5_2:14856509-14856528 None:intergenic 35.0%
!! TAAATTTACACCGGTTTGCA+AGG - chr5_2:14856525-14856544 None:intergenic 35.0%
! TTTTAGTACCAGCATGATTC+TGG + chr5_2:14856664-14856683 Msa0759300:intron 35.0%
! ATTTTAGACTCTGGCATTGT+AGG - chr5_2:14856726-14856745 None:intergenic 35.0%
! GTTGATAGGTCAATTGCTAA+CGG - chr5_2:14856824-14856843 None:intergenic 35.0%
TTTGCAAAATGGCAGTTGAT+AGG - chr5_2:14856838-14856857 None:intergenic 35.0%
!!! ATCAACTGCCATTTTGCAAA+TGG + chr5_2:14856838-14856857 Msa0759300:CDS 35.0%
TTTGCAAATGGTAGACAATG+GGG + chr5_2:14856850-14856869 Msa0759300:CDS 35.0%
TGCAAAGGATTCATGACAAA+TGG + chr5_2:14856876-14856895 Msa0759300:CDS 35.0%
! AGTAGAGCTTGTTTAACACA+AGG + chr5_2:14856905-14856924 Msa0759300:CDS 35.0%
ATGGAGAGAATCTCTTATAG+AGG + chr5_2:14857178-14857197 Msa0759300:CDS 35.0%
AATCTCTTATAGAGGTAGTG+AGG + chr5_2:14857186-14857205 Msa0759300:CDS 35.0%
ATCTCTTATAGAGGTAGTGA+GGG + chr5_2:14857187-14857206 Msa0759300:CDS 35.0%
! ATCTTTATTGGAGATGATGG+AGG - chr5_2:14857221-14857240 None:intergenic 35.0%
ACTTGTTCACTTCCATCATT+AGG - chr5_2:14857283-14857302 None:intergenic 35.0%
TTTAGGAAATACAACTTGCC+TGG + chr5_2:14857375-14857394 Msa0759300:three_prime_UTR 35.0%
TTAGGAAATACAACTTGCCT+GGG + chr5_2:14857376-14857395 Msa0759300:three_prime_UTR 35.0%
GCCAAAATATCCAACTTCTG+AGG + chr5_2:14852714-14852733 Msa0759300:five_prime_UTR 40.0%
! GAAAATGGACAAGGCACTAA+AGG - chr5_2:14852844-14852863 None:intergenic 40.0%
CATTGTGGAGAAAATGGACA+AGG - chr5_2:14852853-14852872 None:intergenic 40.0%
ATATCCTTCCTGAAGCTCTA+AGG + chr5_2:14852949-14852968 Msa0759300:five_prime_UTR 40.0%
AAGACATACCTTAGAGCTTC+AGG - chr5_2:14852960-14852979 None:intergenic 40.0%
TGCGGTGAACGATGTAAATT+CGG + chr5_2:14853498-14853517 Msa0759300:CDS 40.0%
!! TTGGTCTTGCCCAGAATATT+TGG - chr5_2:14853526-14853545 None:intergenic 40.0%
!! AGGTTTTCTGAGTATTGCTG+AGG + chr5_2:14853582-14853601 Msa0759300:CDS 40.0%
!! GGTTTTCTGAGTATTGCTGA+GGG + chr5_2:14853583-14853602 Msa0759300:CDS 40.0%
TGAGCTGTTACAGAACTATG+AGG - chr5_2:14853951-14853970 None:intergenic 40.0%
! ACCTTGTTGACTACTATGGA+TGG + chr5_2:14854111-14854130 Msa0759300:CDS 40.0%
TCCATCCATAGTAGTCAACA+AGG - chr5_2:14854115-14854134 None:intergenic 40.0%
!! GATAATGGAAGGAACGGAAT+TGG + chr5_2:14854164-14854183 Msa0759300:CDS 40.0%
AACAAATGTGCTAGTTCAGG+TGG + chr5_2:14854271-14854290 Msa0759300:CDS 40.0%
TAGTTCACGCCAACACTATT+GGG + chr5_2:14854318-14854337 Msa0759300:CDS 40.0%
TTCGCGACACTAAACACTTT+CGG - chr5_2:14854347-14854366 None:intergenic 40.0%
TTTAGTGTCGCGAAGAATCT+TGG + chr5_2:14854353-14854372 Msa0759300:CDS 40.0%
GCGAAGAATCTTGGAATGAT+GGG + chr5_2:14854362-14854381 Msa0759300:CDS 40.0%
GATGCAATGGATGATATCCA+AGG + chr5_2:14854455-14854474 Msa0759300:CDS 40.0%
ACTCACGGAAATACTGATAG+TGG + chr5_2:14854551-14854570 Msa0759300:CDS 40.0%
GCATTGAACATATTCGATGG+AGG + chr5_2:14854728-14854747 Msa0759300:CDS 40.0%
ATCATCAATGTGGTTGGAAC+CGG + chr5_2:14854851-14854870 Msa0759300:CDS 40.0%
! GGTTATTGGTCTAATCACTC+TGG + chr5_2:14854887-14854906 Msa0759300:CDS 40.0%
! ATTAAGCGTTTCTGGAGGAA+CGG - chr5_2:14854921-14854940 None:intergenic 40.0%
! TTGGAATTAAGCGTTTCTGG+AGG - chr5_2:14854926-14854945 None:intergenic 40.0%
! GGTTTGGAATTAAGCGTTTC+TGG - chr5_2:14854929-14854948 None:intergenic 40.0%
GAAACGCTTAATTCCAAACC+AGG + chr5_2:14854929-14854948 Msa0759300:CDS 40.0%
CAAACCAGGCAATAACTTCA+GGG + chr5_2:14854943-14854962 Msa0759300:CDS 40.0%
TTGTTCTTACCATCCCCATA+TGG - chr5_2:14855199-14855218 None:intergenic 40.0%
TCACACCAGTTGTTATCAGA+CGG - chr5_2:14855243-14855262 None:intergenic 40.0%
ACTCAGCCATATATTGAGTC+TGG + chr5_2:14855408-14855427 Msa0759300:CDS 40.0%
!! AACTAGTGCTTTGGCCTTTT+TGG + chr5_2:14855464-14855483 Msa0759300:CDS 40.0%
TGGTGTAAATGGAGCCAAAA+AGG - chr5_2:14855481-14855500 None:intergenic 40.0%
!!! TTTTGGCTCCATTTACACCA+AGG + chr5_2:14855481-14855500 Msa0759300:CDS 40.0%
! AACCACATCCTTGGTGTAAA+TGG - chr5_2:14855492-14855511 None:intergenic 40.0%
TGCATGCAATATTCATGTGG+AGG + chr5_2:14855704-14855723 Msa0759300:intron 40.0%
TGCAATTCTGTGAGAGGAAA+AGG + chr5_2:14855728-14855747 Msa0759300:intron 40.0%
!! GTCGTTGTGTGCTACTTATA+TGG + chr5_2:14856203-14856222 Msa0759300:CDS 40.0%
AAGAAAGCTGTTGTACTGTG+AGG - chr5_2:14856282-14856301 None:intergenic 40.0%
GCTTTCAATGCCTTTAATGG+GGG - chr5_2:14856305-14856324 None:intergenic 40.0%
GTAATTGGCAAAGAGCCAAT+TGG + chr5_2:14856328-14856347 Msa0759300:CDS 40.0%
GAACCTTGAGTGTAACCAAT+TGG - chr5_2:14856346-14856365 None:intergenic 40.0%
TTGACATCTTCCTTGCAAAC+CGG + chr5_2:14856512-14856531 Msa0759300:CDS 40.0%
TTGTAGGACTTGAGGGAATT+TGG - chr5_2:14856710-14856729 None:intergenic 40.0%
! TGTTCTTAACTGTGCTGTTC+AGG + chr5_2:14856781-14856800 Msa0759300:intron 40.0%
! GTTCTTAACTGTGCTGTTCA+GGG + chr5_2:14856782-14856801 Msa0759300:intron 40.0%
! GCTGATTCTGTTCCTAATGA+TGG + chr5_2:14857268-14857287 Msa0759300:CDS 40.0%
CAATCACACTCCTCAGAAGT+TGG - chr5_2:14852727-14852746 None:intergenic 45.0%
! CAACTTCTGAGGAGTGTGAT+TGG + chr5_2:14852725-14852744 Msa0759300:five_prime_UTR 45.0%
! GACAAGGCACTAAAGGAAAG+TGG - chr5_2:14852837-14852856 None:intergenic 45.0%
CATACCTTAGAGCTTCAGGA+AGG - chr5_2:14852956-14852975 None:intergenic 45.0%
CAATGGCTTCTCTTCAACTG+TGG + chr5_2:14853375-14853394 Msa0759300:CDS 45.0%
! GCAGACCTTGTTGACTACTA+TGG + chr5_2:14854107-14854126 Msa0759300:CDS 45.0%
AGGAACGGAATTGGTGCATT+AGG + chr5_2:14854173-14854192 Msa0759300:CDS 45.0%
TGAGATTCTGCAACGCTTCT+CGG - chr5_2:14854210-14854229 None:intergenic 45.0%
TATCTCCTCTGCAGTTGCTT+CGG - chr5_2:14854252-14854271 None:intergenic 45.0%
GTAGTTCACGCCAACACTAT+TGG + chr5_2:14854317-14854336 Msa0759300:CDS 45.0%
AGTTCACGCCAACACTATTG+GGG + chr5_2:14854319-14854338 Msa0759300:CDS 45.0%
TCGCGACACTAAACACTTTC+GGG - chr5_2:14854346-14854365 None:intergenic 45.0%
CGCGAAGAATCTTGGAATGA+TGG + chr5_2:14854361-14854380 Msa0759300:CDS 45.0%
!! AATCTTGGAATGATGGGCAC+TGG + chr5_2:14854368-14854387 Msa0759300:CDS 45.0%
!! TGATGGGCACTGGTTATGTA+TGG + chr5_2:14854378-14854397 Msa0759300:CDS 45.0%
TCCATTGCCTTCTGATGCAA+TGG + chr5_2:14854442-14854461 Msa0759300:CDS 45.0%
TCCATTGCATCAGAAGGCAA+TGG - chr5_2:14854446-14854465 None:intergenic 45.0%
!! AATACTGATAGTGGCCCTCT+TGG + chr5_2:14854560-14854579 Msa0759300:CDS 45.0%
ATGGAGGAAACACATTGCGT+AGG + chr5_2:14854744-14854763 Msa0759300:CDS 45.0%
GTTAACATGACAGGTGTGAC+AGG + chr5_2:14854779-14854798 Msa0759300:CDS 45.0%
TCATCAATGTGGTTGGAACC+GGG + chr5_2:14854852-14854871 Msa0759300:CDS 45.0%
CCTGAAGTTATTGCCTGGTT+TGG - chr5_2:14854945-14854964 None:intergenic 45.0%
CCAAACCAGGCAATAACTTC+AGG + chr5_2:14854942-14854961 Msa0759300:CDS 45.0%
TGTTTCCAGGCCAAATCACA+GGG - chr5_2:14854985-14855004 None:intergenic 45.0%
! GGTTGGGTTTTTCCGAACAA+TGG + chr5_2:14855022-14855041 Msa0759300:CDS 45.0%
! GGGTTTTTCCGAACAATGGA+AGG + chr5_2:14855026-14855045 Msa0759300:CDS 45.0%
GTACTTGCGAGACAAATTGG+CGG - chr5_2:14855087-14855106 None:intergenic 45.0%
CTGGTACTTGCGAGACAAAT+TGG - chr5_2:14855090-14855109 None:intergenic 45.0%
CAATTTGTCTCGCAAGTACC+AGG + chr5_2:14855088-14855107 Msa0759300:CDS 45.0%
CCTTGAAATGTATCTGTGCC+TGG - chr5_2:14855109-14855128 None:intergenic 45.0%
CCAGGCACAGATACATTTCA+AGG + chr5_2:14855106-14855125 Msa0759300:CDS 45.0%
AAGGGACAGCATAAGGCAAT+AGG - chr5_2:14855165-14855184 None:intergenic 45.0%
TGTTATCAGACGGACAAGCT+CGG - chr5_2:14855233-14855252 None:intergenic 45.0%
CTTGTCCGTCTGATAACAAC+TGG + chr5_2:14855235-14855254 Msa0759300:CDS 45.0%
TAGTGGTAGTAGCACCTGTT+AGG + chr5_2:14855433-14855452 Msa0759300:CDS 45.0%
AGTGGTAGTAGCACCTGTTA+GGG + chr5_2:14855434-14855453 Msa0759300:CDS 45.0%
CTAGTTTCTGTCTCCCTAAC+AGG - chr5_2:14855450-14855469 None:intergenic 45.0%
GGAGACAGAAACTAGTGCTT+TGG + chr5_2:14855455-14855474 Msa0759300:CDS 45.0%
CTCCATTTACACCAAGGATG+TGG + chr5_2:14855487-14855506 Msa0759300:CDS 45.0%
GGTTCAATATTGGTGAGCCA+GGG - chr5_2:14855656-14855675 None:intergenic 45.0%
AGGTTCAATATTGGTGAGCC+AGG - chr5_2:14855657-14855676 None:intergenic 45.0%
CAGCTTTCTTCCCCCATTAA+AGG + chr5_2:14856292-14856311 Msa0759300:CDS 45.0%
GAGCCAATTGGTTACACTCA+AGG + chr5_2:14856340-14856359 Msa0759300:CDS 45.0%
CTTGAGAAGGGTCCTCAAAA+TGG + chr5_2:14856454-14856473 Msa0759300:CDS 45.0%
GGTCAAGAGTTCACCAGAAA+CGG + chr5_2:14856553-14856572 Msa0759300:CDS 45.0%
TCTGGCATTGTAGGACTTGA+GGG - chr5_2:14856717-14856736 None:intergenic 45.0%
ATTGCTAACGGTGAGTCTCT+TGG - chr5_2:14856812-14856831 None:intergenic 45.0%
TAGACAATGGGGACTTGCAA+AGG + chr5_2:14856861-14856880 Msa0759300:CDS 45.0%
GAGAATCAAGTTCCTCTGAG+CGG - chr5_2:14857057-14857076 None:intergenic 45.0%
! ATGATCCTGAGCTAGGGTTT+TGG - chr5_2:14857084-14857103 None:intergenic 45.0%
AACGTGATGATCCTGAGCTA+GGG - chr5_2:14857090-14857109 None:intergenic 45.0%
AAACGTGATGATCCTGAGCT+AGG - chr5_2:14857091-14857110 None:intergenic 45.0%
TCTTATAGAGGTAGTGAGGG+AGG + chr5_2:14857190-14857209 Msa0759300:CDS 45.0%
!!! TTTATTTTAGAAATATAAAA+TGG + chr5_2:14855755-14855774 Msa0759300:intron 5.0%
GTACGGACAAGAGGGACAAT+TGG - chr5_2:14852662-14852681 None:intergenic 50.0%
GGCTTCTCTTCAACTGTGGT+TGG + chr5_2:14853379-14853398 Msa0759300:CDS 50.0%
GGTCATGGCTAGACACAATG+TGG + chr5_2:14853914-14853933 Msa0759300:CDS 50.0%
ATCTCCTCTGCAGTTGCTTC+GGG - chr5_2:14854251-14854270 None:intergenic 50.0%
GTTCACGCCAACACTATTGG+GGG + chr5_2:14854320-14854339 Msa0759300:CDS 50.0%
CTCTCCCTGAAGTTATTGCC+TGG - chr5_2:14854950-14854969 None:intergenic 50.0%
! CTATTCCCTGTGATTTGGCC+TGG + chr5_2:14854977-14854996 Msa0759300:CDS 50.0%
GTGTTTCCAGGCCAAATCAC+AGG - chr5_2:14854986-14855005 None:intergenic 50.0%
TGGCGGTAACTAACGCCTAT+TGG - chr5_2:14855070-14855089 None:intergenic 50.0%
CAGGAATTTGACGGTGCAGT+AGG + chr5_2:14855342-14855361 Msa0759300:intron 50.0%
GCTGTGACAAACCACATCCT+TGG - chr5_2:14855501-14855520 None:intergenic 50.0%
! TCTATCTCCCCTCTTTTCCC+TGG + chr5_2:14855636-14855655 Msa0759300:intron 50.0%
TTGGTGAGCCAGGGAAAAGA+GGG - chr5_2:14855647-14855666 None:intergenic 50.0%
ATTGGTGAGCCAGGGAAAAG+AGG - chr5_2:14855648-14855667 None:intergenic 50.0%
GGAGGTTGCAATTCTGTGAG+AGG + chr5_2:14855722-14855741 Msa0759300:intron 50.0%
AGTGCTCTAGCAGCTTCTTC+AGG - chr5_2:14856436-14856455 None:intergenic 50.0%
! AGCTGCTAGAGCACTTGAGA+AGG + chr5_2:14856441-14856460 Msa0759300:CDS 50.0%
! GCTGCTAGAGCACTTGAGAA+GGG + chr5_2:14856442-14856461 Msa0759300:CDS 50.0%
GAGAAGGGTCCTCAAAATGG+CGG + chr5_2:14856457-14856476 Msa0759300:CDS 50.0%
AAGAGTTCACCAGAAACGGC+TGG + chr5_2:14856557-14856576 Msa0759300:CDS 50.0%
AGAGTTCACCAGAAACGGCT+GGG + chr5_2:14856558-14856577 Msa0759300:CDS 50.0%
TACAAATCCCCAGCCGTTTC+TGG - chr5_2:14856569-14856588 None:intergenic 50.0%
CTCTGGCATTGTAGGACTTG+AGG - chr5_2:14856718-14856737 None:intergenic 50.0%
GAATCAGCTATGCGTGGAGA+TGG - chr5_2:14857256-14857275 None:intergenic 50.0%
GGAACAGAATCAGCTATGCG+TGG - chr5_2:14857262-14857281 None:intergenic 50.0%
TTTCGGGCCCCCAATAGTGT+TGG - chr5_2:14854330-14854349 None:intergenic 55.0%
ATGTGGTTGGAACCGGGTCT+CGG + chr5_2:14854858-14854877 Msa0759300:CDS 55.0%
ATAACCGATCCTCCGAGACC+CGG - chr5_2:14854873-14854892 None:intergenic 55.0%
GGTCTCGGAGGATCGGTTAT+TGG + chr5_2:14854873-14854892 Msa0759300:CDS 55.0%
GGCTTCTGAGCTGTGTTTCC+AGG - chr5_2:14854998-14855017 None:intergenic 55.0%
AACACAGCTCAGAAGCCTCG+CGG + chr5_2:14855001-14855020 Msa0759300:CDS 55.0%
TTCGGAAAAACCCAACCGCG+AGG - chr5_2:14855019-14855038 None:intergenic 55.0%
!! CGGACAAGCTCGGTGTTACT+AGG - chr5_2:14855223-14855242 None:intergenic 55.0%
TGGTGAGCCAGGGAAAAGAG+GGG - chr5_2:14855646-14855665 None:intergenic 55.0%
GAGTTCACCAGAAACGGCTG+GGG + chr5_2:14856559-14856578 Msa0759300:CDS 55.0%
! GTACATCAAGCACCGCTCAG+AGG + chr5_2:14857042-14857061 Msa0759300:CDS 55.0%
!! CCTGAGCTAGGGTTTTGGTC+AGG - chr5_2:14857079-14857098 None:intergenic 55.0%
CCTGACCAAAACCCTAGCTC+AGG + chr5_2:14857076-14857095 Msa0759300:CDS 55.0%
GCAGTTGCTTCGGGTCTCAC+AGG - chr5_2:14854242-14854261 None:intergenic 60.0%
GAGACCCGAAGCAACTGCAG+AGG + chr5_2:14854244-14854263 Msa0759300:CDS 60.0%
CGCGTGCTGTCAACACTCCT+TGG - chr5_2:14854475-14854494 None:intergenic 60.0%
ACGCGTGCACACGCCAGATT+CGG + chr5_2:14854490-14854509 Msa0759300:CDS 60.0%
AGCTCAGAAGCCTCGCGGTT+GGG + chr5_2:14855006-14855025 Msa0759300:CDS 60.0%
!! GCAGCAACGCCGCCATTTTG+AGG - chr5_2:14856469-14856488 None:intergenic 60.0%
TGGTTGGAACCGGGTCTCGG+AGG + chr5_2:14854861-14854880 Msa0759300:CDS 65.0%
GGAACCGGGTCTCGGAGGAT+CGG + chr5_2:14854866-14854885 Msa0759300:CDS 65.0%
CAGCTCAGAAGCCTCGCGGT+TGG + chr5_2:14855005-14855024 Msa0759300:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 14852486 14857522 14852486 ID=Msa0759300;Name=Msa0759300
chr5_2 mRNA 14852486 14857522 14852486 ID=Msa0759300-mRNA-1;Parent=Msa0759300;Name=Msa0759300-mRNA-1;_AED=0.12;_eAED=0.12;_QI=500|1|1|1|0.83|0.71|7|201|951
chr5_2 exon 14852486 14852970 14852486 ID=Msa0759300-mRNA-1:exon:6741;Parent=Msa0759300-mRNA-1
chr5_2 exon 14853322 14853604 14853322 ID=Msa0759300-mRNA-1:exon:6742;Parent=Msa0759300-mRNA-1
chr5_2 exon 14853907 14855258 14853907 ID=Msa0759300-mRNA-1:exon:6743;Parent=Msa0759300-mRNA-1
chr5_2 exon 14855345 14855622 14855345 ID=Msa0759300-mRNA-1:exon:6744;Parent=Msa0759300-mRNA-1
chr5_2 exon 14856056 14856087 14856056 ID=Msa0759300-mRNA-1:exon:6745;Parent=Msa0759300-mRNA-1
chr5_2 exon 14856179 14856585 14856179 ID=Msa0759300-mRNA-1:exon:6746;Parent=Msa0759300-mRNA-1
chr5_2 exon 14856803 14857522 14856803 ID=Msa0759300-mRNA-1:exon:6747;Parent=Msa0759300-mRNA-1
chr5_2 five_prime_UTR 14852486 14852970 14852486 ID=Msa0759300-mRNA-1:five_prime_utr;Parent=Msa0759300-mRNA-1
chr5_2 five_prime_UTR 14853322 14853336 14853322 ID=Msa0759300-mRNA-1:five_prime_utr;Parent=Msa0759300-mRNA-1
chr5_2 CDS 14853337 14853604 14853337 ID=Msa0759300-mRNA-1:cds;Parent=Msa0759300-mRNA-1
chr5_2 CDS 14853907 14855258 14853907 ID=Msa0759300-mRNA-1:cds;Parent=Msa0759300-mRNA-1
chr5_2 CDS 14855345 14855622 14855345 ID=Msa0759300-mRNA-1:cds;Parent=Msa0759300-mRNA-1
chr5_2 CDS 14856056 14856087 14856056 ID=Msa0759300-mRNA-1:cds;Parent=Msa0759300-mRNA-1
chr5_2 CDS 14856179 14856585 14856179 ID=Msa0759300-mRNA-1:cds;Parent=Msa0759300-mRNA-1
chr5_2 CDS 14856803 14857321 14856803 ID=Msa0759300-mRNA-1:cds;Parent=Msa0759300-mRNA-1
chr5_2 three_prime_UTR 14857322 14857522 14857322 ID=Msa0759300-mRNA-1:three_prime_utr;Parent=Msa0759300-mRNA-1
Gene Sequence

>Msa0759300

ATGGTTAAAGTTTGGCTATTAGCTCTAATGATTCTCTACAATGGCTTCTCTTCAACTGTGGTTGGCACTCATAATTCAACAAGGCCTGATATTGTAAATATTGGAGCTCTTTTTTCTTTCAATACTAGTGTTGGTAGGATTATAAAAATTGCTTTAGAAGTTGCGGTGAACGATGTAAATTCGGATCCAAATATTCTGGGCAAGACCAAGTTAAAGCTCTCTCTTCAAGAAGATTCTAAGTATAGAGGTTTTCTGAGTATTGCTGAGGTTTTGCAGGTCATGGCTAGACACAATGTGGCAATAATTGGTCCTCATAGTTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTTCAAGTTCCTCTTATCTCATTTTCAGCTTTAGACCCTACCCTTTCTTCACTTCAATTCCCATTCTTTATCAGAACTTGTCACAGTGATCTTTATCAAATGGCTGCAATAGCAGACCTTGTTGACTACTATGGATGGAAAGAAGTCATTGCTGTATATATTGATGATGATAATGGAAGGAACGGAATTGGTGCATTAGGCGATAAGCTTGCCGAGAAGCGTTGCAGAATCTCATATAAAGCGCCTGTGAGACCCGAAGCAACTGCAGAGGAGATAACAAATGTGCTAGTTCAGGTGGCTCTTGCTGAATCAAGAGTTATAGTAGTTCACGCCAACACTATTGGGGGCCCGAAAGTGTTTAGTGTCGCGAAGAATCTTGGAATGATGGGCACTGGTTATGTATGGATAGCCACTGCTTTTCTTTCTGCTATTCTTGATATAAATAGTCCATTGCCTTCTGATGCAATGGATGATATCCAAGGAGTGTTGACAGCACGCGTGCACACGCCAGATTCGGAGCTTAAAAGAAAGTTTGTTTCTAAATGGCAAAACTTGACTCACGGAAATACTGATAGTGGCCCTCTTGGACTTAGTTTTTTGTGTCTCTATGCATATGATACTATTTATGCTCTTGCTCATGCACTTGATGCATTTTTTAAACAAGGGAACCAAATCACATTCTCAAATGATTCAAAGTTATCTACACTACGTGGAGACAACTTGCGTCTTGATGCATTGAACATATTCGATGGAGGAAACACATTGCGTAGGAACATTTATGAAGTTAACATGACAGGTGTGACAGGCTTGTTCAAGTATGCACCTGATAAAAACCTTGTTAATCCTACATATGAAATCATCAATGTGGTTGGAACCGGGTCTCGGAGGATCGGTTATTGGTCTAATCACTCTGGATTATCATCCGTTCCTCCAGAAACGCTTAATTCCAAACCAGGCAATAACTTCAGGGAGAGTAAAATGCTATTCCCTGTGATTTGGCCTGGAAACACAGCTCAGAAGCCTCGCGGTTGGGTTTTTCCGAACAATGGAAGGCTATTAAGAATCGGAGTACCAATAGGCGTTAGTTACCGCCAATTTGTCTCGCAAGTACCAGGCACAGATACATTTCAAGGATTCTGCATTGATGTATTTCTTTCTGCAGTTAACCTATTGCCTTATGCTGTCCCTTATAAGTTTATTCCATATGGGGATGGTAAGAACAATCCTAGTAACACCGAGCTTGTCCGTCTGATAACAACTGGTGAATTTGACGGTGCAGTAGGTGACATTGCAATTACTACAACAAGAACAAAAATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTTTAGTGGTAGTAGCACCTGTTAGGGAGACAGAAACTAGTGCTTTGGCCTTTTTGGCTCCATTTACACCAAGGATGTGGTTTGTCACAGCTCTCTTTTTCATAATAGTTGGAACTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGAGGACCACCTAAAAAACAAATGGTTACTATTTTTTGGTTTAGCTTTTCAACAATGTTCTTTTCACATAGGGAAAATACAGTGAGCACATTTGGTCGTTGTGTGCTACTTATATGGTTATTTGTAGTTCTTATAATTACTTCAAGTTACACAGCAAGTCTAACATCAATCCTCACAGTACAACAGCTTTCTTCCCCCATTAAAGGCATTGAAAGCTTAGTAATTGGCAAAGAGCCAATTGGTTACACTCAAGGTTCTTTTTCTAAAAACTATTTAATCCAAGAAATTGGTATTGATGAGTCTAGGCTTGTTGCTTTAAAAACACCTGAAGAAGCTGCTAGAGCACTTGAGAAGGGTCCTCAAAATGGCGGCGTTGCTGCTTATATCGATCAACGTGCCTATATTGACATCTTCCTTGCAAACCGGTGTAAATTTACTATTGTAGGTCAAGAGTTCACCAGAAACGGCTGGGGATTTGGCTTTCCAAGAGACTCACCGTTAGCAATTGACCTATCAACTGCCATTTTGCAAATGGTAGACAATGGGGACTTGCAAAGGATTCATGACAAATGGCTTTTGAGTAGAGCTTGTTTAACACAAGGTGCAAAGCTTGAAGTTCAAAGACTCAAACTAAAAAGCTTTTGGGGACTGTATGTGATCTGCGGATCAGCATGTTTGGTTGCTCTACTAATATACTTCATACGGATAATTAGACAGTACATCAAGCACCGCTCAGAGGAACTTGATTCTCCTGACCAAAACCCTAGCTCAGGATCATCACGTTTGAAAAGTTTCATGTCCTTTGTAGATGAAAAAGAAGAGACTGTTAAGAACAGATCGAAAAGAAAGAAAATGGAGAGAATCTCTTATAGAGGTAGTGAGGGAGGATCATCCTCCATCATCTCCAATAAAGATTATGATGCTCAGCCATCTCCACGCATAGCTGATTCTGTTCCTAATGATGGAAGTGAACAAGTATTTGTCAAAGTGGTGTAA
Protein sequence

>Msa0759300

MVKVWLLALMILYNGFSSTVVGTHNSTRPDIVNIGALFSFNTSVGRIIKIALEVAVNDVNSDPNILGKTKLKLSLQEDSKYRGFLSIAEVLQVMARHNVAIIGPHSSVTAHVITHIANELQVPLISFSALDPTLSSLQFPFFIRTCHSDLYQMAAIADLVDYYGWKEVIAVYIDDDNGRNGIGALGDKLAEKRCRISYKAPVRPEATAEEITNVLVQVALAESRVIVVHANTIGGPKVFSVAKNLGMMGTGYVWIATAFLSAILDINSPLPSDAMDDIQGVLTARVHTPDSELKRKFVSKWQNLTHGNTDSGPLGLSFLCLYAYDTIYALAHALDAFFKQGNQITFSNDSKLSTLRGDNLRLDALNIFDGGNTLRRNIYEVNMTGVTGLFKYAPDKNLVNPTYEIINVVGTGSRRIGYWSNHSGLSSVPPETLNSKPGNNFRESKMLFPVIWPGNTAQKPRGWVFPNNGRLLRIGVPIGVSYRQFVSQVPGTDTFQGFCIDVFLSAVNLLPYAVPYKFIPYGDGKNNPSNTELVRLITTGEFDGAVGDIAITTTRTKMVDFTQPYIESGLVVVAPVRETETSALAFLAPFTPRMWFVTALFFIIVGTVVWILEHRVNDEFRGPPKKQMVTIFWFSFSTMFFSHRENTVSTFGRCVLLIWLFVVLIITSSYTASLTSILTVQQLSSPIKGIESLVIGKEPIGYTQGSFSKNYLIQEIGIDESRLVALKTPEEAARALEKGPQNGGVAAYIDQRAYIDIFLANRCKFTIVGQEFTRNGWGFGFPRDSPLAIDLSTAILQMVDNGDLQRIHDKWLLSRACLTQGAKLEVQRLKLKSFWGLYVICGSACLVALLIYFIRIIRQYIKHRSEELDSPDQNPSSGSSRLKSFMSFVDEKEETVKNRSKRKKMERISYRGSEGGSSSIISNKDYDAQPSPRIADSVPNDGSEQVFVKVV*