AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0760980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760980 MtrunA17_Chr5g0411151 98.312 237 4 0 1 237 1 237 7.94e-179 490
Msa0760980 MtrunA17_Chr8g0366581 84.874 238 32 3 1 237 1 235 2.74e-140 392
Msa0760980 MtrunA17_Chr4g0040071 73.000 200 52 1 33 232 13 210 5.04e-108 310
Msa0760980 MtrunA17_Chr5g0395181 69.811 212 55 3 21 232 7 209 2.05e-106 306
Msa0760980 MtrunA17_Chr1g0179781 54.680 203 79 4 35 231 7 202 7.16e-72 218
Msa0760980 MtrunA17_Chr7g0265291 58.000 200 78 3 35 231 7 203 2.32e-70 214
Msa0760980 MtrunA17_Chr2g0308401 50.735 136 57 4 36 161 5 140 5.64e-42 140
Msa0760980 MtrunA17_Chr4g0020811 48.227 141 63 3 31 161 2 142 5.80e-42 140
Msa0760980 MtrunA17_Chr2g0320521 35.622 233 104 6 36 230 7 231 1.30e-40 139
Msa0760980 MtrunA17_Chr7g0230511 34.979 243 112 5 32 230 6 246 2.86e-38 133
Msa0760980 MtrunA17_Chr2g0297251 35.088 228 109 5 35 230 37 257 7.60e-37 130
Msa0760980 MtrunA17_Chr4g0065041 45.185 135 73 1 35 169 8 141 1.21e-35 127
Msa0760980 MtrunA17_Chr2g0320561 47.183 142 65 4 36 167 5 146 2.11e-35 125
Msa0760980 MtrunA17_Chr2g0320551 44.853 136 65 3 36 161 5 140 3.42e-34 120
Msa0760980 MtrunA17_Chr4g0052451 43.902 82 40 1 87 162 11 92 1.26e-19 80.5
Msa0760980 MtrunA17_Chr8g0392151 35.616 146 71 5 37 161 15 158 1.01e-17 79.3
Msa0760980 MtrunA17_Chr8g0386511 30.247 162 96 4 74 230 4 153 1.85e-15 71.2
Msa0760980 MtrunA17_Chr5g0434331 26.238 202 105 9 35 230 43 206 3.39e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0760980 AT4G17900.1 74.678 233 51 4 1 231 1 227 2.07e-127 360
Msa0760980 AT4G17900.2 74.257 202 45 3 32 231 17 213 4.37e-108 310
Msa0760980 AT1G32700.1 72.093 215 55 2 25 237 2 213 1.25e-104 301
Msa0760980 AT1G32700.2 73.446 177 42 2 63 237 1 174 4.47e-82 243
Msa0760980 AT5G46710.1 53.191 235 95 6 1 230 1 225 3.21e-80 240
Msa0760980 AT1G21000.1 48.750 240 84 4 28 230 9 246 3.07e-75 228
Msa0760980 AT1G21000.2 48.750 240 84 4 28 230 6 243 3.28e-75 228
Msa0760980 AT5G46710.3 52.404 208 91 4 28 230 5 209 1.82e-72 220
Msa0760980 AT1G76590.1 49.130 230 81 2 35 230 18 245 6.14e-71 217
Msa0760980 AT5G46710.2 60.494 162 56 3 1 161 1 155 5.49e-68 207
Msa0760980 AT1G43000.2 47.442 215 101 2 28 230 9 223 4.61e-66 204
Msa0760980 AT1G43000.1 47.442 215 101 2 28 230 2 216 4.85e-66 204
Msa0760980 AT2G27930.1 45.673 208 81 5 35 232 4 189 4.26e-52 167
Msa0760980 AT2G27930.4 45.673 208 81 5 35 232 4 189 4.26e-52 167
Msa0760980 AT2G27930.3 54.745 137 52 2 35 161 4 140 2.93e-47 154
Msa0760980 AT2G27930.2 54.745 137 52 2 35 161 4 140 2.93e-47 154
Msa0760980 AT2G12646.3 46.667 135 71 1 35 169 3 136 1.69e-36 129
Msa0760980 AT2G12646.1 46.667 135 71 1 35 169 6 139 1.91e-36 129
Msa0760980 AT2G12646.2 46.667 135 71 1 35 169 6 139 1.91e-36 129
Msa0760980 AT1G31040.1 35.398 226 114 4 35 230 19 242 2.46e-36 129
Msa0760980 AT3G60670.1 45.455 132 71 1 30 161 2 132 1.56e-34 124
Msa0760980 AT2G27930.5 47.403 154 50 4 88 232 61 192 3.91e-34 121
Msa0760980 AT2G27930.6 47.403 154 50 4 88 232 61 192 3.91e-34 121
Msa0760980 AT2G01818.1 33.488 215 116 8 37 230 13 221 1.26e-20 87.0

Find 81 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACAAAGATTAAGTAAAA+AGG 0.205563 5_2:-17910254 Msa0760980:three_prime_UTR
AGAGAGAGAAGCAGCAAAAT+AGG 0.216121 5_2:+17912565 None:intergenic
ACCATGATTCTCCTGTTCTT+TGG 0.256621 5_2:+17912393 None:intergenic
AAAATGTACTCCTTGGAAAA+AGG 0.303792 5_2:-17910375 Msa0760980:three_prime_UTR
TGGTATTCCCTTTCTTCTCT+TGG 0.322835 5_2:+17910788 None:intergenic
TGGTTTGATTTCTCTGACAC+TGG 0.330907 5_2:+17912413 None:intergenic
AAAGGTGCTATATCTAAATA+TGG 0.332200 5_2:-17910357 Msa0760980:three_prime_UTR
TCCTTCCGGTTCTGTTCTCT+TGG 0.350274 5_2:-17911494 Msa0760980:CDS
GGGAGGGAATGGGTTCTTGT+AGG 0.352977 5_2:+17912625 None:intergenic
GTAAATATTGGTTTAGTAAG+TGG 0.356276 5_2:-17910413 Msa0760980:three_prime_UTR
CAAAGACCACCGTTACATTC+AGG 0.356801 5_2:-17912061 Msa0760980:intron
GTGGTTGATGTTGTAAATAT+TGG 0.365343 5_2:-17910425 Msa0760980:three_prime_UTR
TTCTGCAATTAACTGAAGTT+GGG 0.369679 5_2:+17910814 None:intergenic
AAGAAGAGTGAGGGAGGGAA+TGG 0.371714 5_2:+17912614 None:intergenic
AATTGCCATTGGTGTGTGTT+TGG 0.376749 5_2:+17912452 None:intergenic
GTAGCCTTCTTGATTCCTTC+CGG 0.377067 5_2:-17911508 Msa0760980:CDS
TAAATATTGGTTTAGTAAGT+GGG 0.378766 5_2:-17910412 Msa0760980:three_prime_UTR
CAGAAACACTTGGACATTGC+TGG 0.382483 5_2:-17911635 Msa0760980:CDS
GAGAGAGAAGCAGCAAAATA+GGG 0.404029 5_2:+17912566 None:intergenic
GTTCTGCAATTAACTGAAGT+TGG 0.404594 5_2:+17910813 None:intergenic
AAACTTACGTATAATTACTT+TGG 0.408129 5_2:+17910449 None:intergenic
CTTCATACCATGATGTGATA+AGG 0.416229 5_2:-17911670 Msa0760980:CDS
TGAATGTAATATGTATTGTT+TGG 0.429253 5_2:-17912127 Msa0760980:CDS
GGAGGGAATGGGTTCTTGTA+GGG 0.429300 5_2:+17912626 None:intergenic
CCTTGCACTGTTGATAATGT+AGG 0.430360 5_2:+17911604 None:intergenic
TATTGTTTGGATTGTATGAA+TGG 0.430470 5_2:-17912114 Msa0760980:CDS
CTAAGAACTTCCAGAAGAAA+AGG 0.442353 5_2:-17910947 Msa0760980:CDS
GTTTAGTAAGTGGGGAAGAA+AGG 0.442965 5_2:-17910403 Msa0760980:three_prime_UTR
GAGAAATCAAACCAAAGAAC+AGG 0.443596 5_2:-17912404 Msa0760980:CDS
ATACCACATAGAGCCCCATT+GGG 0.447453 5_2:-17910771 Msa0760980:CDS
GGAAATGAAAATGTACTCCT+TGG 0.450242 5_2:-17910382 Msa0760980:three_prime_UTR
GAATGGGTTCTTGTAGGGCT+TGG 0.453026 5_2:+17912631 None:intergenic
TTCATACCATGATGTGATAA+GGG 0.458976 5_2:-17911669 Msa0760980:CDS
AATCCAAATAGAAGTGGAAA+AGG 0.476100 5_2:-17910598 Msa0760980:three_prime_UTR
TGCAACCAAGAGAACAGAAC+CGG 0.486127 5_2:+17911489 None:intergenic
AGAAGAGTGAGGGAGGGAAT+GGG 0.492224 5_2:+17912615 None:intergenic
GAATGTAACGGTGGTCTTTG+TGG 0.500381 5_2:+17912064 None:intergenic
CAGAACAGCCAAGAGAAGAA+AGG 0.504865 5_2:-17910796 Msa0760980:CDS
GTTCTGTTCTCTTGGTTGCA+AGG 0.507358 5_2:-17911486 Msa0760980:intron
AGAACAGCCAAGAGAAGAAA+GGG 0.515726 5_2:-17910795 Msa0760980:CDS
AATAGAAGTGGAAAAGGTTG+AGG 0.522137 5_2:-17910592 Msa0760980:three_prime_UTR
CATCTGTTATCATCATCATC+AGG 0.523367 5_2:+17912225 None:intergenic
CCTCAACCAAGGCCAGGAAA+AGG 0.529589 5_2:-17911560 Msa0760980:CDS
AATACCACATAGAGCCCCAT+TGG 0.536612 5_2:-17910772 Msa0760980:CDS
TTCAACAATGGTTTCAACCA+TGG 0.537430 5_2:+17912198 None:intergenic
GAAGTAAAGAAGAGTGAGGG+AGG 0.538528 5_2:+17912608 None:intergenic
TGCACCACCAACTATTTCAC+AGG 0.545032 5_2:+17910550 None:intergenic
AAGTAAAGAAGAGTGAGGGA+GGG 0.545559 5_2:+17912609 None:intergenic
AAGAAAGCTTCTTTCAACAA+TGG 0.545716 5_2:+17912186 None:intergenic
TTGAGAAGTAAAGAAGAGTG+AGG 0.545760 5_2:+17912604 None:intergenic
CATTCACCCTTATCACATCA+TGG 0.546598 5_2:+17911663 None:intergenic
ACCAAAGAACAGGAGAATCA+TGG 0.546667 5_2:-17912394 Msa0760980:intron
TATGGTTTGAACAGATTAGG+AGG 0.550366 5_2:-17911694 Msa0760980:intron
GAATGTGAATTGCAGATTGT+GGG 0.552420 5_2:-17910975 Msa0760980:intron
AAAGACACCTGTGAAATAGT+TGG 0.556251 5_2:-17910557 Msa0760980:three_prime_UTR
GAAAGGCCTCAACCAAGGCC+AGG 0.557056 5_2:-17911566 Msa0760980:CDS
CCTACATTATCAACAGTGCA+AGG 0.564703 5_2:-17911604 Msa0760980:CDS
TGAGAAGTAAAGAAGAGTGA+GGG 0.572177 5_2:+17912605 None:intergenic
AAGGAGACAATTAACAGCAA+TGG 0.585369 5_2:-17910928 Msa0760980:CDS
GTTCTTGTAGGGCTTGGAAG+CGG 0.586350 5_2:+17912637 None:intergenic
AAATATTGGTTTAGTAAGTG+GGG 0.593666 5_2:-17910411 Msa0760980:three_prime_UTR
AGCAATGGCATCAGATTCTG+AGG 0.610535 5_2:-17910913 Msa0760980:CDS
TGAATGAAAGGCCTCAACCA+AGG 0.613108 5_2:-17911571 Msa0760980:CDS
TCAAACCAAACACACACCAA+TGG 0.622465 5_2:-17912457 Msa0760980:exon
AACAATGGTTTCAACCATGG+TGG 0.622605 5_2:+17912201 None:intergenic
GAATGAGATTCAGAAACACT+TGG 0.628209 5_2:-17911645 Msa0760980:CDS
TCTGCAATTAACTGAAGTTG+GGG 0.651804 5_2:+17910815 None:intergenic
GAAGACAAACCTGAATGTAA+CGG 0.653422 5_2:+17912052 None:intergenic
AGAACCGGAAGGAATCAAGA+AGG 0.656588 5_2:+17911504 None:intergenic
CTACATTATCAACAGTGCAA+GGG 0.657965 5_2:-17911603 Msa0760980:CDS
ACCACATAGAGCCCCATTGG+GGG 0.661326 5_2:-17910769 Msa0760980:CDS
TACCACATAGAGCCCCATTG+GGG 0.680294 5_2:-17910770 Msa0760980:CDS
CCACATAGAGCCCCATTGGG+GGG 0.682285 5_2:-17910768 Msa0760980:CDS
GACACCTGTGAAATAGTTGG+TGG 0.682466 5_2:-17910554 Msa0760980:three_prime_UTR
ATGATAACAGATGGCCACCA+TGG 0.683499 5_2:-17912215 Msa0760980:CDS
ACCAAGAGAACAGAACCGGA+AGG 0.684862 5_2:+17911493 None:intergenic
AATGTGAATTGCAGATTGTG+GGG 0.690938 5_2:-17910974 Msa0760980:intron
CTGATGATGATGATAACAGA+TGG 0.692210 5_2:-17912224 Msa0760980:CDS
GACAAACCTGAATGTAACGG+TGG 0.716496 5_2:+17912055 None:intergenic
GCAAGACAGAGAGAACAGAG+AGG 0.742658 5_2:+17912090 None:intergenic
CTGCAATTAACTGAAGTTGG+GGG 0.746847 5_2:+17910816 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTATTATATATATATATCA+GGG + chr5_2:17912190-17912209 None:intergenic 10.0%
!! TAGTATTATATATATATATC+AGG + chr5_2:17912191-17912210 None:intergenic 10.0%
!! AGTATTATATATATATATCA+GGG + chr5_2:17912190-17912209 None:intergenic 10.0%
!! TAGTATTATATATATATATC+AGG + chr5_2:17912191-17912210 None:intergenic 10.0%
!!! TTTTGATTTGATTTTTGAAT+AGG - chr5_2:17910620-17910639 Msa0760980:three_prime_UTR 15.0%
!!! TTTGATTTGATTTTTGAATA+GGG - chr5_2:17910621-17910640 Msa0760980:three_prime_UTR 15.0%
!!! ATTATAAGTTTTTCTACAAA+AGG + chr5_2:17910883-17910902 None:intergenic 15.0%
!! GTATTATATATATATATCAG+GGG + chr5_2:17912189-17912208 None:intergenic 15.0%
!!! AAGTAAGTCTTTTTTAATAT+AGG - chr5_2:17912398-17912417 Msa0760980:CDS 15.0%
!! TTTACAAAGATTAAGTAAAA+AGG - chr5_2:17912625-17912644 Msa0760980:five_prime_UTR 15.0%
!! TTACAAAGATTAAGTAAAAA+GGG - chr5_2:17912626-17912645 Msa0760980:five_prime_UTR 15.0%
!!! TTTTGATTTGATTTTTGAAT+AGG - chr5_2:17910620-17910639 Msa0760980:three_prime_UTR 15.0%
!!! TTTGATTTGATTTTTGAATA+GGG - chr5_2:17910621-17910640 Msa0760980:three_prime_UTR 15.0%
!!! ATTATAAGTTTTTCTACAAA+AGG + chr5_2:17910883-17910902 None:intergenic 15.0%
!! GTATTATATATATATATCAG+GGG + chr5_2:17912189-17912208 None:intergenic 15.0%
!!! AAGTAAGTCTTTTTTAATAT+AGG - chr5_2:17912398-17912417 Msa0760980:CDS 15.0%
!! TTTACAAAGATTAAGTAAAA+AGG - chr5_2:17912625-17912644 Msa0760980:five_prime_UTR 15.0%
!! TTACAAAGATTAAGTAAAAA+GGG - chr5_2:17912626-17912645 Msa0760980:five_prime_UTR 15.0%
!!! TTTTTCTCTACATTGTATTA+TGG - chr5_2:17910571-17910590 Msa0760980:three_prime_UTR 20.0%
!! TGAATGTAATATGTATTGTT+TGG - chr5_2:17910752-17910771 Msa0760980:CDS 20.0%
!! AATTAAACATTAGACATCAA+TGG + chr5_2:17911141-17911160 None:intergenic 20.0%
!!! CTAAAGTTTGTTTTTTTGTA+TGG - chr5_2:17911167-17911186 Msa0760980:intron 20.0%
!! AATAATTGATGAGAATACAT+TGG + chr5_2:17911448-17911467 None:intergenic 20.0%
!!! CTAGTAAAGAAACTTTTTAT+GGG - chr5_2:17911674-17911693 Msa0760980:CDS 20.0%
!!! GTATCCTTCAATTTAATTTT+TGG - chr5_2:17911759-17911778 Msa0760980:intron 20.0%
!! TATGCCAAAAATTAAATTGA+AGG + chr5_2:17911766-17911785 None:intergenic 20.0%
!! ACATTAAAAAAACCATATGT+TGG - chr5_2:17911798-17911817 Msa0760980:intron 20.0%
!! CATTAAAAAAACCATATGTT+GGG - chr5_2:17911799-17911818 Msa0760980:intron 20.0%
!! AAACTTACGTATAATTACTT+TGG + chr5_2:17912433-17912452 None:intergenic 20.0%
!!! TAAATATTGGTTTAGTAAGT+GGG - chr5_2:17912467-17912486 Msa0760980:five_prime_UTR 20.0%
!!! TTTTTCTCTACATTGTATTA+TGG - chr5_2:17910571-17910590 Msa0760980:three_prime_UTR 20.0%
!! TGAATGTAATATGTATTGTT+TGG - chr5_2:17910752-17910771 Msa0760980:CDS 20.0%
!! AATTAAACATTAGACATCAA+TGG + chr5_2:17911141-17911160 None:intergenic 20.0%
!!! CTAAAGTTTGTTTTTTTGTA+TGG - chr5_2:17911167-17911186 Msa0760980:intron 20.0%
!! AATAATTGATGAGAATACAT+TGG + chr5_2:17911448-17911467 None:intergenic 20.0%
!!! CTAGTAAAGAAACTTTTTAT+GGG - chr5_2:17911674-17911693 Msa0760980:CDS 20.0%
!!! GTATCCTTCAATTTAATTTT+TGG - chr5_2:17911759-17911778 Msa0760980:intron 20.0%
!! TATGCCAAAAATTAAATTGA+AGG + chr5_2:17911766-17911785 None:intergenic 20.0%
!! ACATTAAAAAAACCATATGT+TGG - chr5_2:17911798-17911817 Msa0760980:intron 20.0%
!! CATTAAAAAAACCATATGTT+GGG - chr5_2:17911799-17911818 Msa0760980:intron 20.0%
!! AAACTTACGTATAATTACTT+TGG + chr5_2:17912433-17912452 None:intergenic 20.0%
!!! TAAATATTGGTTTAGTAAGT+GGG - chr5_2:17912467-17912486 Msa0760980:five_prime_UTR 20.0%
! TATTGTTTGGATTGTATGAA+TGG - chr5_2:17910765-17910784 Msa0760980:CDS 25.0%
!! CTTATAATCTGACACATTTT+TGG - chr5_2:17910895-17910914 Msa0760980:CDS 25.0%
!! TTATAGATTCGTTCTTTTTC+TGG - chr5_2:17910930-17910949 Msa0760980:CDS 25.0%
!! TATAGATTCGTTCTTTTTCT+GGG - chr5_2:17910931-17910950 Msa0760980:CDS 25.0%
!! ATCTAAGTGTTATTCTGAAA+TGG - chr5_2:17910996-17911015 Msa0760980:intron 25.0%
!!! TCTAAGTGTTATTCTGAAAT+GGG - chr5_2:17910997-17911016 Msa0760980:intron 25.0%
!! GCTAGTAAAGAAACTTTTTA+TGG - chr5_2:17911673-17911692 Msa0760980:CDS 25.0%
! AATATTCAAATCCCAACATA+TGG + chr5_2:17911813-17911832 None:intergenic 25.0%
!!! AGTTATGATTTTGACAAAGA+TGG + chr5_2:17911846-17911865 None:intergenic 25.0%
!! GTAATTATACGTAAGTTTTG+TGG - chr5_2:17912435-17912454 Msa0760980:CDS 25.0%
!!! GTAAATATTGGTTTAGTAAG+TGG - chr5_2:17912466-17912485 Msa0760980:five_prime_UTR 25.0%
!!! AAATATTGGTTTAGTAAGTG+GGG - chr5_2:17912468-17912487 Msa0760980:five_prime_UTR 25.0%
!!! AAAGGTGCTATATCTAAATA+TGG - chr5_2:17912522-17912541 Msa0760980:intron 25.0%
!! GTTTTTAAATGTCGAACAAT+GGG + chr5_2:17912605-17912624 None:intergenic 25.0%
!! AGTTTTTAAATGTCGAACAA+TGG + chr5_2:17912606-17912625 None:intergenic 25.0%
! TATTGTTTGGATTGTATGAA+TGG - chr5_2:17910765-17910784 Msa0760980:CDS 25.0%
!! CTTATAATCTGACACATTTT+TGG - chr5_2:17910895-17910914 Msa0760980:CDS 25.0%
!! TTATAGATTCGTTCTTTTTC+TGG - chr5_2:17910930-17910949 Msa0760980:CDS 25.0%
!! TATAGATTCGTTCTTTTTCT+GGG - chr5_2:17910931-17910950 Msa0760980:CDS 25.0%
!! ATCTAAGTGTTATTCTGAAA+TGG - chr5_2:17910996-17911015 Msa0760980:intron 25.0%
!!! TCTAAGTGTTATTCTGAAAT+GGG - chr5_2:17910997-17911016 Msa0760980:intron 25.0%
!! GCTAGTAAAGAAACTTTTTA+TGG - chr5_2:17911673-17911692 Msa0760980:CDS 25.0%
! AATATTCAAATCCCAACATA+TGG + chr5_2:17911813-17911832 None:intergenic 25.0%
!!! AGTTATGATTTTGACAAAGA+TGG + chr5_2:17911846-17911865 None:intergenic 25.0%
!! GTAATTATACGTAAGTTTTG+TGG - chr5_2:17912435-17912454 Msa0760980:CDS 25.0%
!!! GTAAATATTGGTTTAGTAAG+TGG - chr5_2:17912466-17912485 Msa0760980:five_prime_UTR 25.0%
!!! AAATATTGGTTTAGTAAGTG+GGG - chr5_2:17912468-17912487 Msa0760980:five_prime_UTR 25.0%
!!! AAAGGTGCTATATCTAAATA+TGG - chr5_2:17912522-17912541 Msa0760980:intron 25.0%
!! GTTTTTAAATGTCGAACAAT+GGG + chr5_2:17912605-17912624 None:intergenic 25.0%
!! AGTTTTTAAATGTCGAACAA+TGG + chr5_2:17912606-17912625 None:intergenic 25.0%
GTGAAAAAGTGAAAGATGTT+TGG + chr5_2:17910393-17910412 None:intergenic 30.0%
! TCTTGATTTTCAATTGCCAT+TGG + chr5_2:17910441-17910460 None:intergenic 30.0%
AAGAAAGCTTCTTTCAACAA+TGG + chr5_2:17910696-17910715 None:intergenic 30.0%
AATAGCTGAAAATCAGCAAA+AGG + chr5_2:17911041-17911060 None:intergenic 30.0%
GCACATTAATTAGACATCAA+TGG + chr5_2:17911091-17911110 None:intergenic 30.0%
TTGTATGGTTTGAACAGATT+AGG - chr5_2:17911182-17911201 Msa0760980:intron 30.0%
TTCATACCATGATGTGATAA+GGG - chr5_2:17911210-17911229 Msa0760980:intron 30.0%
AGGTAATTTACCTTACTTCT+TGG - chr5_2:17911413-17911432 Msa0760980:intron 30.0%
AATTGATGAGAATACATTGG+TGG + chr5_2:17911445-17911464 None:intergenic 30.0%
! TGCACTATAACAATGTTTTG+TGG - chr5_2:17911561-17911580 Msa0760980:CDS 30.0%
! ACTATAACAATGTTTTGTGG+CGG - chr5_2:17911564-17911583 Msa0760980:CDS 30.0%
!!! TGAGGTTGACTTTTTCATAA+TGG - chr5_2:17911711-17911730 Msa0760980:intron 30.0%
!!! GAGGTTGACTTTTTCATAAT+GGG - chr5_2:17911712-17911731 Msa0760980:intron 30.0%
! TTAATTGTCTCCTTTTCTTC+TGG + chr5_2:17911945-17911964 None:intergenic 30.0%
!! GAACTTTGATTTTCTTCTGA+CGG + chr5_2:17912020-17912039 None:intergenic 30.0%
TTCTGCAATTAACTGAAGTT+GGG + chr5_2:17912068-17912087 None:intergenic 30.0%
AGCAAAAATCCAAATAGAAG+TGG - chr5_2:17912275-17912294 Msa0760980:intron 30.0%
AATCCAAATAGAAGTGGAAA+AGG - chr5_2:17912281-17912300 Msa0760980:intron 30.0%
GTGCATTTAGCAAAAAGAAT+GGG - chr5_2:17912347-17912366 Msa0760980:intron 30.0%
TGCATTTAGCAAAAAGAATG+GGG - chr5_2:17912348-17912367 Msa0760980:intron 30.0%
! GTGGTTGATGTTGTAAATAT+TGG - chr5_2:17912454-17912473 Msa0760980:exon 30.0%
AAAATGTACTCCTTGGAAAA+AGG - chr5_2:17912504-17912523 Msa0760980:five_prime_UTR 30.0%
CAAAGATTAAGTAAAAAGGG+TGG - chr5_2:17912629-17912648 Msa0760980:five_prime_UTR 30.0%
GTGAAAAAGTGAAAGATGTT+TGG + chr5_2:17910393-17910412 None:intergenic 30.0%
! TCTTGATTTTCAATTGCCAT+TGG + chr5_2:17910441-17910460 None:intergenic 30.0%
AAGAAAGCTTCTTTCAACAA+TGG + chr5_2:17910696-17910715 None:intergenic 30.0%
AATAGCTGAAAATCAGCAAA+AGG + chr5_2:17911041-17911060 None:intergenic 30.0%
GCACATTAATTAGACATCAA+TGG + chr5_2:17911091-17911110 None:intergenic 30.0%
TTGTATGGTTTGAACAGATT+AGG - chr5_2:17911182-17911201 Msa0760980:intron 30.0%
TTCATACCATGATGTGATAA+GGG - chr5_2:17911210-17911229 Msa0760980:intron 30.0%
AGGTAATTTACCTTACTTCT+TGG - chr5_2:17911413-17911432 Msa0760980:intron 30.0%
AATTGATGAGAATACATTGG+TGG + chr5_2:17911445-17911464 None:intergenic 30.0%
! TGCACTATAACAATGTTTTG+TGG - chr5_2:17911561-17911580 Msa0760980:CDS 30.0%
! ACTATAACAATGTTTTGTGG+CGG - chr5_2:17911564-17911583 Msa0760980:CDS 30.0%
!!! TGAGGTTGACTTTTTCATAA+TGG - chr5_2:17911711-17911730 Msa0760980:intron 30.0%
!!! GAGGTTGACTTTTTCATAAT+GGG - chr5_2:17911712-17911731 Msa0760980:intron 30.0%
! TTAATTGTCTCCTTTTCTTC+TGG + chr5_2:17911945-17911964 None:intergenic 30.0%
!! GAACTTTGATTTTCTTCTGA+CGG + chr5_2:17912020-17912039 None:intergenic 30.0%
TTCTGCAATTAACTGAAGTT+GGG + chr5_2:17912068-17912087 None:intergenic 30.0%
AGCAAAAATCCAAATAGAAG+TGG - chr5_2:17912275-17912294 Msa0760980:intron 30.0%
AATCCAAATAGAAGTGGAAA+AGG - chr5_2:17912281-17912300 Msa0760980:intron 30.0%
GTGCATTTAGCAAAAAGAAT+GGG - chr5_2:17912347-17912366 Msa0760980:intron 30.0%
TGCATTTAGCAAAAAGAATG+GGG - chr5_2:17912348-17912367 Msa0760980:intron 30.0%
! GTGGTTGATGTTGTAAATAT+TGG - chr5_2:17912454-17912473 Msa0760980:exon 30.0%
AAAATGTACTCCTTGGAAAA+AGG - chr5_2:17912504-17912523 Msa0760980:five_prime_UTR 30.0%
CAAAGATTAAGTAAAAAGGG+TGG - chr5_2:17912629-17912648 Msa0760980:five_prime_UTR 30.0%
TGAGAAGTAAAGAAGAGTGA+GGG + chr5_2:17910277-17910296 None:intergenic 35.0%
TTGAGAAGTAAAGAAGAGTG+AGG + chr5_2:17910278-17910297 None:intergenic 35.0%
GAGAAATCAAACCAAAGAAC+AGG - chr5_2:17910475-17910494 Msa0760980:three_prime_UTR 35.0%
ATCCAGCATTAGATTCTTGA+TGG - chr5_2:17910516-17910535 Msa0760980:three_prime_UTR 35.0%
TCCAGCATTAGATTCTTGAT+GGG - chr5_2:17910517-17910536 Msa0760980:three_prime_UTR 35.0%
! TTGATTTTTGAATAGGGTGC+TGG - chr5_2:17910627-17910646 Msa0760980:three_prime_UTR 35.0%
CATCTGTTATCATCATCATC+AGG + chr5_2:17910657-17910676 None:intergenic 35.0%
! CTGATGATGATGATAACAGA+TGG - chr5_2:17910655-17910674 Msa0760980:three_prime_UTR 35.0%
TTCAACAATGGTTTCAACCA+TGG + chr5_2:17910684-17910703 None:intergenic 35.0%
GAAGACAAACCTGAATGTAA+CGG + chr5_2:17910830-17910849 None:intergenic 35.0%
!!! TCTGACACATTTTTGGTTCA+TGG - chr5_2:17910902-17910921 Msa0760980:CDS 35.0%
!!! CTGACACATTTTTGGTTCAT+GGG - chr5_2:17910903-17910922 Msa0760980:CDS 35.0%
TATGGTTTGAACAGATTAGG+AGG - chr5_2:17911185-17911204 Msa0760980:intron 35.0%
CTTCATACCATGATGTGATA+AGG - chr5_2:17911209-17911228 Msa0760980:intron 35.0%
GAATGAGATTCAGAAACACT+TGG - chr5_2:17911234-17911253 Msa0760980:intron 35.0%
CTACATTATCAACAGTGCAA+GGG - chr5_2:17911276-17911295 Msa0760980:intron 35.0%
!! GGGTTGTGTTTTTGAATGAA+AGG - chr5_2:17911296-17911315 Msa0760980:intron 35.0%
GTGGAATAAACCAAGAAGTA+AGG + chr5_2:17911426-17911445 None:intergenic 35.0%
CTGAACAAATCGCTATTGTT+CGG - chr5_2:17911480-17911499 Msa0760980:intron 35.0%
TGGGTTAAAATGAGTTGTTG+AGG - chr5_2:17911693-17911712 Msa0760980:intron 35.0%
TGAATGTGAATTGCAGATTG+TGG - chr5_2:17911903-17911922 Msa0760980:intron 35.0%
GAATGTGAATTGCAGATTGT+GGG - chr5_2:17911904-17911923 Msa0760980:intron 35.0%
AATGTGAATTGCAGATTGTG+GGG - chr5_2:17911905-17911924 Msa0760980:intron 35.0%
CTAAGAACTTCCAGAAGAAA+AGG - chr5_2:17911932-17911951 Msa0760980:intron 35.0%
AAGGAGACAATTAACAGCAA+TGG - chr5_2:17911951-17911970 Msa0760980:intron 35.0%
TCTGCAATTAACTGAAGTTG+GGG + chr5_2:17912067-17912086 None:intergenic 35.0%
GTTCTGCAATTAACTGAAGT+TGG + chr5_2:17912069-17912088 None:intergenic 35.0%
! CAACCTTTTCCACTTCTATT+TGG + chr5_2:17912287-17912306 None:intergenic 35.0%
AATAGAAGTGGAAAAGGTTG+AGG - chr5_2:17912287-17912306 Msa0760980:intron 35.0%
AAAGACACCTGTGAAATAGT+TGG - chr5_2:17912322-17912341 Msa0760980:intron 35.0%
GGTGCATTTAGCAAAAAGAA+TGG - chr5_2:17912346-17912365 Msa0760980:intron 35.0%
GGAAATGAAAATGTACTCCT+TGG - chr5_2:17912497-17912516 Msa0760980:five_prime_UTR 35.0%
! AGATATAGCACCTTTTTCCA+AGG + chr5_2:17912517-17912536 None:intergenic 35.0%
TGAGAAGTAAAGAAGAGTGA+GGG + chr5_2:17910277-17910296 None:intergenic 35.0%
TTGAGAAGTAAAGAAGAGTG+AGG + chr5_2:17910278-17910297 None:intergenic 35.0%
GAGAAATCAAACCAAAGAAC+AGG - chr5_2:17910475-17910494 Msa0760980:three_prime_UTR 35.0%
ATCCAGCATTAGATTCTTGA+TGG - chr5_2:17910516-17910535 Msa0760980:three_prime_UTR 35.0%
TCCAGCATTAGATTCTTGAT+GGG - chr5_2:17910517-17910536 Msa0760980:three_prime_UTR 35.0%
! TTGATTTTTGAATAGGGTGC+TGG - chr5_2:17910627-17910646 Msa0760980:three_prime_UTR 35.0%
CATCTGTTATCATCATCATC+AGG + chr5_2:17910657-17910676 None:intergenic 35.0%
! CTGATGATGATGATAACAGA+TGG - chr5_2:17910655-17910674 Msa0760980:three_prime_UTR 35.0%
TTCAACAATGGTTTCAACCA+TGG + chr5_2:17910684-17910703 None:intergenic 35.0%
GAAGACAAACCTGAATGTAA+CGG + chr5_2:17910830-17910849 None:intergenic 35.0%
!!! TCTGACACATTTTTGGTTCA+TGG - chr5_2:17910902-17910921 Msa0760980:CDS 35.0%
!!! CTGACACATTTTTGGTTCAT+GGG - chr5_2:17910903-17910922 Msa0760980:CDS 35.0%
TATGGTTTGAACAGATTAGG+AGG - chr5_2:17911185-17911204 Msa0760980:intron 35.0%
CTTCATACCATGATGTGATA+AGG - chr5_2:17911209-17911228 Msa0760980:intron 35.0%
GAATGAGATTCAGAAACACT+TGG - chr5_2:17911234-17911253 Msa0760980:intron 35.0%
CTACATTATCAACAGTGCAA+GGG - chr5_2:17911276-17911295 Msa0760980:intron 35.0%
!! GGGTTGTGTTTTTGAATGAA+AGG - chr5_2:17911296-17911315 Msa0760980:intron 35.0%
GTGGAATAAACCAAGAAGTA+AGG + chr5_2:17911426-17911445 None:intergenic 35.0%
CTGAACAAATCGCTATTGTT+CGG - chr5_2:17911480-17911499 Msa0760980:intron 35.0%
TGGGTTAAAATGAGTTGTTG+AGG - chr5_2:17911693-17911712 Msa0760980:intron 35.0%
TGAATGTGAATTGCAGATTG+TGG - chr5_2:17911903-17911922 Msa0760980:intron 35.0%
GAATGTGAATTGCAGATTGT+GGG - chr5_2:17911904-17911923 Msa0760980:intron 35.0%
AATGTGAATTGCAGATTGTG+GGG - chr5_2:17911905-17911924 Msa0760980:intron 35.0%
CTAAGAACTTCCAGAAGAAA+AGG - chr5_2:17911932-17911951 Msa0760980:intron 35.0%
AAGGAGACAATTAACAGCAA+TGG - chr5_2:17911951-17911970 Msa0760980:intron 35.0%
TCTGCAATTAACTGAAGTTG+GGG + chr5_2:17912067-17912086 None:intergenic 35.0%
GTTCTGCAATTAACTGAAGT+TGG + chr5_2:17912069-17912088 None:intergenic 35.0%
! CAACCTTTTCCACTTCTATT+TGG + chr5_2:17912287-17912306 None:intergenic 35.0%
AATAGAAGTGGAAAAGGTTG+AGG - chr5_2:17912287-17912306 Msa0760980:intron 35.0%
AAAGACACCTGTGAAATAGT+TGG - chr5_2:17912322-17912341 Msa0760980:intron 35.0%
GGTGCATTTAGCAAAAAGAA+TGG - chr5_2:17912346-17912365 Msa0760980:intron 35.0%
GGAAATGAAAATGTACTCCT+TGG - chr5_2:17912497-17912516 Msa0760980:five_prime_UTR 35.0%
! AGATATAGCACCTTTTTCCA+AGG + chr5_2:17912517-17912536 None:intergenic 35.0%
AAGTAAAGAAGAGTGAGGGA+GGG + chr5_2:17910273-17910292 None:intergenic 40.0%
GAGAGAGAAGCAGCAAAATA+GGG + chr5_2:17910316-17910335 None:intergenic 40.0%
AGAGAGAGAAGCAGCAAAAT+AGG + chr5_2:17910317-17910336 None:intergenic 40.0%
TCAAACCAAACACACACCAA+TGG - chr5_2:17910422-17910441 Msa0760980:three_prime_UTR 40.0%
AATTGCCATTGGTGTGTGTT+TGG + chr5_2:17910430-17910449 None:intergenic 40.0%
! TGGTTTGATTTCTCTGACAC+TGG + chr5_2:17910469-17910488 None:intergenic 40.0%
ACCAAAGAACAGGAGAATCA+TGG - chr5_2:17910485-17910504 Msa0760980:three_prime_UTR 40.0%
ACCATGATTCTCCTGTTCTT+TGG + chr5_2:17910489-17910508 None:intergenic 40.0%
ACCCATCAAGAATCTAATGC+TGG + chr5_2:17910521-17910540 None:intergenic 40.0%
!!! ATTTTTGAATAGGGTGCTGG+AGG - chr5_2:17910630-17910649 Msa0760980:three_prime_UTR 40.0%
AACAATGGTTTCAACCATGG+TGG + chr5_2:17910681-17910700 None:intergenic 40.0%
CTCAGCACAGAAAACAAAAG+TGG + chr5_2:17910976-17910995 None:intergenic 40.0%
CATTCACCCTTATCACATCA+TGG + chr5_2:17911219-17911238 None:intergenic 40.0%
!! CCTTGCACTGTTGATAATGT+AGG + chr5_2:17911278-17911297 None:intergenic 40.0%
CCTACATTATCAACAGTGCA+AGG - chr5_2:17911275-17911294 Msa0760980:intron 40.0%
GCTATAACAATGTTGTGTGG+CGG + chr5_2:17911607-17911626 None:intergenic 40.0%
TGCGCTATAACAATGTTGTG+TGG + chr5_2:17911610-17911629 None:intergenic 40.0%
CAAGAGTCTCGTGAATCAAA+TGG + chr5_2:17911740-17911759 None:intergenic 40.0%
CTGCAATTAACTGAAGTTGG+GGG + chr5_2:17912066-17912085 None:intergenic 40.0%
AGAACAGCCAAGAGAAGAAA+GGG - chr5_2:17912084-17912103 Msa0760980:CDS 40.0%
TGGTATTCCCTTTCTTCTCT+TGG + chr5_2:17912094-17912113 None:intergenic 40.0%
!!! TACTTGTTTTGCTACACGCA+CGG + chr5_2:17912383-17912402 None:intergenic 40.0%
GTTTAGTAAGTGGGGAAGAA+AGG - chr5_2:17912476-17912495 Msa0760980:five_prime_UTR 40.0%
AAGTAAAGAAGAGTGAGGGA+GGG + chr5_2:17910273-17910292 None:intergenic 40.0%
GAGAGAGAAGCAGCAAAATA+GGG + chr5_2:17910316-17910335 None:intergenic 40.0%
AGAGAGAGAAGCAGCAAAAT+AGG + chr5_2:17910317-17910336 None:intergenic 40.0%
TCAAACCAAACACACACCAA+TGG - chr5_2:17910422-17910441 Msa0760980:three_prime_UTR 40.0%
AATTGCCATTGGTGTGTGTT+TGG + chr5_2:17910430-17910449 None:intergenic 40.0%
! TGGTTTGATTTCTCTGACAC+TGG + chr5_2:17910469-17910488 None:intergenic 40.0%
ACCAAAGAACAGGAGAATCA+TGG - chr5_2:17910485-17910504 Msa0760980:three_prime_UTR 40.0%
ACCATGATTCTCCTGTTCTT+TGG + chr5_2:17910489-17910508 None:intergenic 40.0%
ACCCATCAAGAATCTAATGC+TGG + chr5_2:17910521-17910540 None:intergenic 40.0%
!!! ATTTTTGAATAGGGTGCTGG+AGG - chr5_2:17910630-17910649 Msa0760980:three_prime_UTR 40.0%
AACAATGGTTTCAACCATGG+TGG + chr5_2:17910681-17910700 None:intergenic 40.0%
CTCAGCACAGAAAACAAAAG+TGG + chr5_2:17910976-17910995 None:intergenic 40.0%
CATTCACCCTTATCACATCA+TGG + chr5_2:17911219-17911238 None:intergenic 40.0%
!! CCTTGCACTGTTGATAATGT+AGG + chr5_2:17911278-17911297 None:intergenic 40.0%
CCTACATTATCAACAGTGCA+AGG - chr5_2:17911275-17911294 Msa0760980:intron 40.0%
GCTATAACAATGTTGTGTGG+CGG + chr5_2:17911607-17911626 None:intergenic 40.0%
TGCGCTATAACAATGTTGTG+TGG + chr5_2:17911610-17911629 None:intergenic 40.0%
CAAGAGTCTCGTGAATCAAA+TGG + chr5_2:17911740-17911759 None:intergenic 40.0%
CTGCAATTAACTGAAGTTGG+GGG + chr5_2:17912066-17912085 None:intergenic 40.0%
AGAACAGCCAAGAGAAGAAA+GGG - chr5_2:17912084-17912103 Msa0760980:CDS 40.0%
TGGTATTCCCTTTCTTCTCT+TGG + chr5_2:17912094-17912113 None:intergenic 40.0%
!!! TACTTGTTTTGCTACACGCA+CGG + chr5_2:17912383-17912402 None:intergenic 40.0%
GTTTAGTAAGTGGGGAAGAA+AGG - chr5_2:17912476-17912495 Msa0760980:five_prime_UTR 40.0%
GAAGTAAAGAAGAGTGAGGG+AGG + chr5_2:17910274-17910293 None:intergenic 45.0%
ATGATAACAGATGGCCACCA+TGG - chr5_2:17910664-17910683 Msa0760980:three_prime_UTR 45.0%
GAATGTAACGGTGGTCTTTG+TGG + chr5_2:17910818-17910837 None:intergenic 45.0%
CAAAGACCACCGTTACATTC+AGG - chr5_2:17910818-17910837 Msa0760980:CDS 45.0%
GACAAACCTGAATGTAACGG+TGG + chr5_2:17910827-17910846 None:intergenic 45.0%
CAGAAACACTTGGACATTGC+TGG - chr5_2:17911244-17911263 Msa0760980:intron 45.0%
TGAATGAAAGGCCTCAACCA+AGG - chr5_2:17911308-17911327 Msa0760980:intron 45.0%
! GTGTTTGTGACACCTTTTCC+TGG + chr5_2:17911334-17911353 None:intergenic 45.0%
GTAGCCTTCTTGATTCCTTC+CGG - chr5_2:17911371-17911390 Msa0760980:intron 45.0%
AGAACCGGAAGGAATCAAGA+AGG + chr5_2:17911378-17911397 None:intergenic 45.0%
TGCAACCAAGAGAACAGAAC+CGG + chr5_2:17911393-17911412 None:intergenic 45.0%
GTTCTGTTCTCTTGGTTGCA+AGG - chr5_2:17911393-17911412 Msa0760980:intron 45.0%
AGCAATGGCATCAGATTCTG+AGG - chr5_2:17911966-17911985 Msa0760980:intron 45.0%
CAATTAACTGAAGTTGGGGG+TGG + chr5_2:17912063-17912082 None:intergenic 45.0%
CAGAACAGCCAAGAGAAGAA+AGG - chr5_2:17912083-17912102 Msa0760980:CDS 45.0%
AATACCACATAGAGCCCCAT+TGG - chr5_2:17912107-17912126 Msa0760980:CDS 45.0%
ATACCACATAGAGCCCCATT+GGG - chr5_2:17912108-17912127 Msa0760980:CDS 45.0%
GACACCTGTGAAATAGTTGG+TGG - chr5_2:17912325-17912344 Msa0760980:intron 45.0%
TGCACCACCAACTATTTCAC+AGG + chr5_2:17912332-17912351 None:intergenic 45.0%
!!! ACTTGTTTTGCTACACGCAC+GGG + chr5_2:17912382-17912401 None:intergenic 45.0%
GAAGTAAAGAAGAGTGAGGG+AGG + chr5_2:17910274-17910293 None:intergenic 45.0%
ATGATAACAGATGGCCACCA+TGG - chr5_2:17910664-17910683 Msa0760980:three_prime_UTR 45.0%
GAATGTAACGGTGGTCTTTG+TGG + chr5_2:17910818-17910837 None:intergenic 45.0%
CAAAGACCACCGTTACATTC+AGG - chr5_2:17910818-17910837 Msa0760980:CDS 45.0%
GACAAACCTGAATGTAACGG+TGG + chr5_2:17910827-17910846 None:intergenic 45.0%
CAGAAACACTTGGACATTGC+TGG - chr5_2:17911244-17911263 Msa0760980:intron 45.0%
TGAATGAAAGGCCTCAACCA+AGG - chr5_2:17911308-17911327 Msa0760980:intron 45.0%
! GTGTTTGTGACACCTTTTCC+TGG + chr5_2:17911334-17911353 None:intergenic 45.0%
GTAGCCTTCTTGATTCCTTC+CGG - chr5_2:17911371-17911390 Msa0760980:intron 45.0%
AGAACCGGAAGGAATCAAGA+AGG + chr5_2:17911378-17911397 None:intergenic 45.0%
TGCAACCAAGAGAACAGAAC+CGG + chr5_2:17911393-17911412 None:intergenic 45.0%
GTTCTGTTCTCTTGGTTGCA+AGG - chr5_2:17911393-17911412 Msa0760980:intron 45.0%
AGCAATGGCATCAGATTCTG+AGG - chr5_2:17911966-17911985 Msa0760980:intron 45.0%
CAATTAACTGAAGTTGGGGG+TGG + chr5_2:17912063-17912082 None:intergenic 45.0%
CAGAACAGCCAAGAGAAGAA+AGG - chr5_2:17912083-17912102 Msa0760980:CDS 45.0%
AATACCACATAGAGCCCCAT+TGG - chr5_2:17912107-17912126 Msa0760980:CDS 45.0%
ATACCACATAGAGCCCCATT+GGG - chr5_2:17912108-17912127 Msa0760980:CDS 45.0%
GACACCTGTGAAATAGTTGG+TGG - chr5_2:17912325-17912344 Msa0760980:intron 45.0%
TGCACCACCAACTATTTCAC+AGG + chr5_2:17912332-17912351 None:intergenic 45.0%
!!! ACTTGTTTTGCTACACGCAC+GGG + chr5_2:17912382-17912401 None:intergenic 45.0%
GTTCTTGTAGGGCTTGGAAG+CGG + chr5_2:17910245-17910264 None:intergenic 50.0%
! GAATGGGTTCTTGTAGGGCT+TGG + chr5_2:17910251-17910270 None:intergenic 50.0%
! GGAGGGAATGGGTTCTTGTA+GGG + chr5_2:17910256-17910275 None:intergenic 50.0%
AGAAGAGTGAGGGAGGGAAT+GGG + chr5_2:17910267-17910286 None:intergenic 50.0%
AAGAAGAGTGAGGGAGGGAA+TGG + chr5_2:17910268-17910287 None:intergenic 50.0%
GCAAGACAGAGAGAACAGAG+AGG + chr5_2:17910792-17910811 None:intergenic 50.0%
TCCTTCCGGTTCTGTTCTCT+TGG - chr5_2:17911385-17911404 Msa0760980:intron 50.0%
ACCAAGAGAACAGAACCGGA+AGG + chr5_2:17911389-17911408 None:intergenic 50.0%
TACCACATAGAGCCCCATTG+GGG - chr5_2:17912109-17912128 Msa0760980:CDS 50.0%
TAGATCAAGTCCCCCCAATG+GGG + chr5_2:17912124-17912143 None:intergenic 50.0%
CTAGATCAAGTCCCCCCAAT+GGG + chr5_2:17912125-17912144 None:intergenic 50.0%
TCTAGATCAAGTCCCCCCAA+TGG + chr5_2:17912126-17912145 None:intergenic 50.0%
GTTCTTGTAGGGCTTGGAAG+CGG + chr5_2:17910245-17910264 None:intergenic 50.0%
! GAATGGGTTCTTGTAGGGCT+TGG + chr5_2:17910251-17910270 None:intergenic 50.0%
! GGAGGGAATGGGTTCTTGTA+GGG + chr5_2:17910256-17910275 None:intergenic 50.0%
AGAAGAGTGAGGGAGGGAAT+GGG + chr5_2:17910267-17910286 None:intergenic 50.0%
AAGAAGAGTGAGGGAGGGAA+TGG + chr5_2:17910268-17910287 None:intergenic 50.0%
GCAAGACAGAGAGAACAGAG+AGG + chr5_2:17910792-17910811 None:intergenic 50.0%
TCCTTCCGGTTCTGTTCTCT+TGG - chr5_2:17911385-17911404 Msa0760980:intron 50.0%
ACCAAGAGAACAGAACCGGA+AGG + chr5_2:17911389-17911408 None:intergenic 50.0%
TACCACATAGAGCCCCATTG+GGG - chr5_2:17912109-17912128 Msa0760980:CDS 50.0%
TAGATCAAGTCCCCCCAATG+GGG + chr5_2:17912124-17912143 None:intergenic 50.0%
CTAGATCAAGTCCCCCCAAT+GGG + chr5_2:17912125-17912144 None:intergenic 50.0%
TCTAGATCAAGTCCCCCCAA+TGG + chr5_2:17912126-17912145 None:intergenic 50.0%
! GGGAGGGAATGGGTTCTTGT+AGG + chr5_2:17910257-17910276 None:intergenic 55.0%
!!! CCTTTTCCTGGCCTTGGTTG+AGG + chr5_2:17911322-17911341 None:intergenic 55.0%
CCTCAACCAAGGCCAGGAAA+AGG - chr5_2:17911319-17911338 Msa0760980:intron 55.0%
! GTGACACCTTTTCCTGGCCT+TGG + chr5_2:17911328-17911347 None:intergenic 55.0%
GAAGTTGGGGGTGGTGTAGA+TGG + chr5_2:17912054-17912073 None:intergenic 55.0%
ACCACATAGAGCCCCATTGG+GGG - chr5_2:17912110-17912129 Msa0760980:CDS 55.0%
! GGGAGGGAATGGGTTCTTGT+AGG + chr5_2:17910257-17910276 None:intergenic 55.0%
!!! CCTTTTCCTGGCCTTGGTTG+AGG + chr5_2:17911322-17911341 None:intergenic 55.0%
CCTCAACCAAGGCCAGGAAA+AGG - chr5_2:17911319-17911338 Msa0760980:intron 55.0%
! GTGACACCTTTTCCTGGCCT+TGG + chr5_2:17911328-17911347 None:intergenic 55.0%
GAAGTTGGGGGTGGTGTAGA+TGG + chr5_2:17912054-17912073 None:intergenic 55.0%
ACCACATAGAGCCCCATTGG+GGG - chr5_2:17912110-17912129 Msa0760980:CDS 55.0%
GAAAGGCCTCAACCAAGGCC+AGG - chr5_2:17911313-17911332 Msa0760980:intron 60.0%
CCACATAGAGCCCCATTGGG+GGG - chr5_2:17912111-17912130 Msa0760980:CDS 60.0%
GAAAGGCCTCAACCAAGGCC+AGG - chr5_2:17911313-17911332 Msa0760980:intron 60.0%
CCACATAGAGCCCCATTGGG+GGG - chr5_2:17912111-17912130 Msa0760980:CDS 60.0%
CCCCCCAATGGGGCTCTATG+TGG + chr5_2:17912114-17912133 None:intergenic 65.0%
CCCCCCAATGGGGCTCTATG+TGG + chr5_2:17912114-17912133 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 17910224 17912677 17910224 ID=Msa0760980;Name=Msa0760980
chr5_2 mRNA 17910224 17912677 17910224 ID=Msa0760980-mRNA-1;Parent=Msa0760980;Name=Msa0760980-mRNA-1;_AED=0.08;_eAED=0.08;_QI=191|1|1|1|0.75|0.6|5|525|237
chr5_2 exon 17910224 17910982 17910224 ID=Msa0760980-mRNA-1:exon:7822;Parent=Msa0760980-mRNA-1
chr5_2 exon 17911487 17911702 17911487 ID=Msa0760980-mRNA-1:exon:7821;Parent=Msa0760980-mRNA-1
chr5_2 exon 17912062 17912259 17912062 ID=Msa0760980-mRNA-1:exon:7820;Parent=Msa0760980-mRNA-1
chr5_2 exon 17912395 17912536 17912395 ID=Msa0760980-mRNA-1:exon:7819;Parent=Msa0760980-mRNA-1
chr5_2 exon 17912563 17912677 17912563 ID=Msa0760980-mRNA-1:exon:7818;Parent=Msa0760980-mRNA-1
chr5_2 five_prime_UTR 17912563 17912677 17912563 ID=Msa0760980-mRNA-1:five_prime_utr;Parent=Msa0760980-mRNA-1
chr5_2 five_prime_UTR 17912461 17912536 17912461 ID=Msa0760980-mRNA-1:five_prime_utr;Parent=Msa0760980-mRNA-1
chr5_2 CDS 17912395 17912460 17912395 ID=Msa0760980-mRNA-1:cds;Parent=Msa0760980-mRNA-1
chr5_2 CDS 17912062 17912259 17912062 ID=Msa0760980-mRNA-1:cds;Parent=Msa0760980-mRNA-1
chr5_2 CDS 17911487 17911702 17911487 ID=Msa0760980-mRNA-1:cds;Parent=Msa0760980-mRNA-1
chr5_2 CDS 17910749 17910982 17910749 ID=Msa0760980-mRNA-1:cds;Parent=Msa0760980-mRNA-1
chr5_2 three_prime_UTR 17910224 17910748 17910224 ID=Msa0760980-mRNA-1:three_prime_utr;Parent=Msa0760980-mRNA-1
Gene Sequence

>Msa0760980

ATGGCAATTGAAAATCAAGAAAACACCAGTGTCAGAGAAATCAAACCAAAGAACAGGAGAATCATGGGTGCTGGAGGACCTGATGATGATGATAACAGATGGCCACCATGGTTGAAACCATTGTTGAAAGAAGCTTTCTTTGTTCAATGCAAGATACATGCTGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAATGGTCCTCTCTGTTCTCTCTGTCTTGCTTACCACAAAGACCACCGTTACATTCAGATTAGGAGGTCTTCATACCATGATGTGATAAGGGTGAATGAGATTCAGAAACACTTGGACATTGCTGGTGTTCAAACCTACATTATCAACAGTGCAAGGGTTGTGTTTTTGAATGAAAGGCCTCAACCAAGGCCAGGAAAAGGTGTCACAAACACTTGTGAAGTTTGTGAGCGTAGCCTTCTTGATTCCTTCCGGTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACATCTAAGAACTTCCAGAAGAAAAGGAGACAATTAACAGCAATGGCATCAGATTCTGAGGAGTCATACAGTAGCAACAACATTCATAGCCGTCAGAAGAAAATCAAAGTTCAAAGCTTTACACCATCTACACCACCCCCAACTTCAGTTAATTGCAGAACAGCCAAGAGAAGAAAGGGAATACCACATAGAGCCCCATTGGGGGGACTTGATCTAGATTATTAG
Protein sequence

>Msa0760980

MAIENQENTSVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKEAFFVQCKIHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRYIQIRRSSYHDVIRVNEIQKHLDIAGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKKRRQLTAMASDSEESYSSNNIHSRQKKIKVQSFTPSTPPPTSVNCRTAKRRKGIPHRAPLGGLDLDY*