AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0841610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0841610 MtrunA17_Chr5g0411151 98.734 237 3 0 1 237 1 237 1.55e-180 494
Msa0841610 MtrunA17_Chr8g0366581 85.294 238 31 3 1 237 1 235 5.84e-142 396
Msa0841610 MtrunA17_Chr4g0040071 73.500 200 51 1 33 232 13 210 7.61e-110 315
Msa0841610 MtrunA17_Chr5g0395181 70.283 212 54 3 21 232 7 209 1.17e-107 309
Msa0841610 MtrunA17_Chr1g0179781 54.680 203 79 4 35 231 7 202 6.08e-72 218
Msa0841610 MtrunA17_Chr7g0265291 58.000 200 78 3 35 231 7 203 1.99e-70 214
Msa0841610 MtrunA17_Chr4g0020811 48.227 141 63 3 31 161 2 142 5.61e-42 140
Msa0841610 MtrunA17_Chr2g0308401 50.735 136 57 4 36 161 5 140 5.64e-42 140
Msa0841610 MtrunA17_Chr2g0320521 36.000 225 114 5 36 230 7 231 9.93e-41 139
Msa0841610 MtrunA17_Chr7g0230511 34.979 243 112 5 32 230 6 246 1.94e-38 134
Msa0841610 MtrunA17_Chr2g0297251 35.088 228 109 5 35 230 37 257 4.13e-37 130
Msa0841610 MtrunA17_Chr4g0065041 45.185 135 73 1 35 169 8 141 1.19e-35 127
Msa0841610 MtrunA17_Chr2g0320561 47.183 142 65 4 36 167 5 146 2.06e-35 126
Msa0841610 MtrunA17_Chr2g0320551 44.853 136 65 3 36 161 5 140 3.17e-34 120
Msa0841610 MtrunA17_Chr4g0052451 43.902 82 40 1 87 162 11 92 1.10e-19 80.9
Msa0841610 MtrunA17_Chr8g0392151 35.616 146 71 5 37 161 15 158 9.67e-18 79.3
Msa0841610 MtrunA17_Chr8g0386511 31.677 161 95 6 74 230 4 153 2.11e-15 71.2
Msa0841610 MtrunA17_Chr5g0434331 25.248 202 107 8 35 230 43 206 3.25e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0841610 AT4G17900.1 74.249 233 52 4 1 231 1 227 4.12e-126 357
Msa0841610 AT4G17900.2 73.762 202 46 3 32 231 17 213 9.18e-107 307
Msa0841610 AT1G32700.1 72.093 215 55 2 25 237 2 213 4.28e-105 303
Msa0841610 AT1G32700.2 73.446 177 42 2 63 237 1 174 1.60e-82 244
Msa0841610 AT5G46710.1 53.191 235 95 6 1 230 1 225 1.48e-80 241
Msa0841610 AT1G21000.2 48.750 240 84 4 28 230 6 243 3.96e-76 230
Msa0841610 AT1G21000.1 48.750 240 84 4 28 230 9 246 4.51e-76 230
Msa0841610 AT5G46710.3 52.404 208 91 4 28 230 5 209 7.20e-73 221
Msa0841610 AT1G76590.1 49.130 230 81 2 35 230 18 245 5.97e-72 220
Msa0841610 AT5G46710.2 60.494 162 56 3 1 161 1 155 4.37e-68 207
Msa0841610 AT1G43000.2 47.907 215 100 2 28 230 9 223 6.32e-68 209
Msa0841610 AT1G43000.1 47.907 215 100 2 28 230 2 216 7.57e-68 208
Msa0841610 AT2G27930.1 45.673 208 81 5 35 232 4 189 3.70e-52 167
Msa0841610 AT2G27930.4 45.673 208 81 5 35 232 4 189 3.70e-52 167
Msa0841610 AT2G27930.3 54.745 137 52 2 35 161 4 140 2.29e-47 154
Msa0841610 AT2G27930.2 54.745 137 52 2 35 161 4 140 2.29e-47 154
Msa0841610 AT2G12646.3 46.667 135 71 1 35 169 3 136 1.60e-36 129
Msa0841610 AT2G12646.1 46.667 135 71 1 35 169 6 139 1.80e-36 129
Msa0841610 AT2G12646.2 46.667 135 71 1 35 169 6 139 1.80e-36 129
Msa0841610 AT1G31040.1 35.398 226 114 4 35 230 19 242 2.26e-36 129
Msa0841610 AT3G60670.1 45.455 132 71 1 30 161 2 132 1.50e-34 124
Msa0841610 AT2G27930.5 47.403 154 50 4 88 232 61 192 3.87e-34 121
Msa0841610 AT2G27930.6 47.403 154 50 4 88 232 61 192 3.87e-34 121
Msa0841610 AT2G01818.1 33.953 215 115 9 37 230 13 221 2.06e-21 89.4
Msa0841610 AT2G01818.2 33.766 154 80 7 94 230 9 157 3.26e-11 60.5

Find 85 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACAAAGATTAAGTAAAA+AGG 0.205563 5_4:-18066335 Msa0841610:three_prime_UTR
AGAGAGAGAAGCAGCAAAAT+AGG 0.216121 5_4:+18068611 None:intergenic
ACCATGATTCTCCTGTTCTT+TGG 0.256621 5_4:+18068454 None:intergenic
ATTAGTATTATATATATATC+AGG 0.262300 5_4:+18066772 None:intergenic
AAAATGTACTCCTTGGAAAA+AGG 0.303792 5_4:-18066456 Msa0841610:three_prime_UTR
TGGTATTCCCTTTCTTCTCT+TGG 0.322835 5_4:+18066869 None:intergenic
TGGTTTGATTTCTCTGACAC+TGG 0.330907 5_4:+18068474 None:intergenic
AAAGGTGCTATATCTAAATA+TGG 0.332200 5_4:-18066438 Msa0841610:three_prime_UTR
TCCTTCCGGTTCTGTTCTCT+TGG 0.350274 5_4:-18067547 Msa0841610:CDS
TCAATTGCCATTGGTGTGTT+TGG 0.350936 5_4:+18068511 None:intergenic
GGGAGGGAATGGGTTCTTGT+AGG 0.352977 5_4:+18068671 None:intergenic
GTAAATATTGGTTTAGTAAG+TGG 0.356276 5_4:-18066494 Msa0841610:three_prime_UTR
CAAAGACCACCGTTACATTC+AGG 0.356801 5_4:-18068122 Msa0841610:intron
TTCTGTAATTAACTGAAGTT+GGG 0.357223 5_4:+18066895 None:intergenic
GTGGTTGATGTTGTAAATAT+TGG 0.365343 5_4:-18066506 Msa0841610:three_prime_UTR
AAGAAGAGTGAGGGAGGGAA+TGG 0.371714 5_4:+18068660 None:intergenic
GTAGCCTTCTTGATTCCTTC+CGG 0.377067 5_4:-18067561 Msa0841610:CDS
TAAATATTGGTTTAGTAAGT+GGG 0.378766 5_4:-18066493 Msa0841610:three_prime_UTR
CAGAAACACTTGGACATTGC+TGG 0.382483 5_4:-18067688 Msa0841610:CDS
GTTCTGTAATTAACTGAAGT+TGG 0.401937 5_4:+18066894 None:intergenic
GAGAGAGAAGCAGCAAAATA+GGG 0.404029 5_4:+18068612 None:intergenic
CTTCATACCATGATGTGATA+AGG 0.416229 5_4:-18067723 Msa0841610:CDS
AAACTTAGGTATAATTACTT+TGG 0.428168 5_4:+18066530 None:intergenic
TGAATGTAATATGTATTGTT+TGG 0.429253 5_4:-18068188 Msa0841610:CDS
GGAGGGAATGGGTTCTTGTA+GGG 0.429300 5_4:+18068672 None:intergenic
CCTTGCACTGTTGATAATGT+AGG 0.430360 5_4:+18067657 None:intergenic
TATTGTTTGGATTGTATGAA+TGG 0.430470 5_4:-18068175 Msa0841610:CDS
CTAAGAACTTCCAGAAGAAA+AGG 0.442353 5_4:-18067028 Msa0841610:CDS
GTTTAGTAAGTGGGGAAGAA+AGG 0.442965 5_4:-18066484 Msa0841610:three_prime_UTR
GAGAAATCAAACCAAAGAAC+AGG 0.443596 5_4:-18068465 Msa0841610:CDS
ATACCACATAGAGCCCCATT+GGG 0.447453 5_4:-18066852 Msa0841610:CDS
GGAAATGAAAATGTACTCCT+TGG 0.450242 5_4:-18066463 Msa0841610:three_prime_UTR
GAATGGGTTCTTGTAGGGCT+TGG 0.453026 5_4:+18068677 None:intergenic
TTCATACCATGATGTGATAA+GGG 0.458976 5_4:-18067722 Msa0841610:CDS
CAACATCAACCACAAAACTT+AGG 0.464632 5_4:+18066516 None:intergenic
AATCCAAATAGAAGTGGAAA+AGG 0.476100 5_4:-18066679 Msa0841610:three_prime_UTR
GTTCTGTTCTCTTGGTTGCA+AGG 0.482122 5_4:-18067539 Msa0841610:intron
TGCAACCAAGAGAACAGAAC+CGG 0.486127 5_4:+18067542 None:intergenic
AGAACAGCCAAGAGAAGAAA+GGG 0.492152 5_4:-18066876 Msa0841610:CDS
AGAAGAGTGAGGGAGGGAAT+GGG 0.492224 5_4:+18068661 None:intergenic
CAGAACAGCCAAGAGAAGAA+AGG 0.499241 5_4:-18066877 Msa0841610:CDS
GAATGTAACGGTGGTCTTTG+TGG 0.500381 5_4:+18068125 None:intergenic
AATAGAAGTGGAAAAGGTTG+AGG 0.522137 5_4:-18066673 Msa0841610:three_prime_UTR
CATCTGTTATCATCATCATC+AGG 0.523367 5_4:+18068286 None:intergenic
CCTCAACCAAGGCCAGGAAA+AGG 0.529589 5_4:-18067613 Msa0841610:CDS
TTAGTATTATATATATATCA+GGG 0.534992 5_4:+18066773 None:intergenic
AATACCACATAGAGCCCCAT+TGG 0.536612 5_4:-18066853 Msa0841610:CDS
TTCAACAATGGTTTCAACCA+TGG 0.537430 5_4:+18068259 None:intergenic
GAAGTAAAGAAGAGTGAGGG+AGG 0.538528 5_4:+18068654 None:intergenic
TGCACCACCAACTATTTCAC+AGG 0.545032 5_4:+18066631 None:intergenic
AAGTAAAGAAGAGTGAGGGA+GGG 0.545559 5_4:+18068655 None:intergenic
AAGAAAGCTTCTTTCAACAA+TGG 0.545716 5_4:+18068247 None:intergenic
TTGAGAAGTAAAGAAGAGTG+AGG 0.545760 5_4:+18068650 None:intergenic
CATTCACCCTTATCACATCA+TGG 0.546598 5_4:+18067716 None:intergenic
ACCAAAGAACAGGAGAATCA+TGG 0.546667 5_4:-18068455 Msa0841610:intron
TATGGTTTGAACAGATTAGG+AGG 0.550366 5_4:-18067747 Msa0841610:intron
GAATGTGAATTGCAGATTGT+GGG 0.552420 5_4:-18067056 Msa0841610:intron
AAAGACACCTGTGAAATAGT+TGG 0.556251 5_4:-18066638 Msa0841610:three_prime_UTR
GAAAGGCCTCAACCAAGGCC+AGG 0.557056 5_4:-18067619 Msa0841610:CDS
CCTACATTATCAACAGTGCA+AGG 0.564703 5_4:-18067657 Msa0841610:CDS
TGAGAAGTAAAGAAGAGTGA+GGG 0.572177 5_4:+18068651 None:intergenic
AAGGAGACAATTAACAGCAA+TGG 0.585369 5_4:-18067009 Msa0841610:CDS
GTTCTTGTAGGGCTTGGAAG+CGG 0.586350 5_4:+18068683 None:intergenic
AAATATTGGTTTAGTAAGTG+GGG 0.593666 5_4:-18066492 Msa0841610:three_prime_UTR
AGCAATGGCATCAGATTCTG+AGG 0.610535 5_4:-18066994 Msa0841610:CDS
TGAATGAAAGGCCTCAACCA+AGG 0.613108 5_4:-18067624 Msa0841610:CDS
AACAATGGTTTCAACCATGG+TGG 0.622605 5_4:+18068262 None:intergenic
CTTCAAACCAAACACACCAA+TGG 0.625444 5_4:-18068518 Msa0841610:exon
GAATGAGATTCAGAAACACT+TGG 0.628209 5_4:-18067698 Msa0841610:CDS
GAAGACAAACCTGAATGTAA+CGG 0.653422 5_4:+18068113 None:intergenic
AGAACCGGAAGGAATCAAGA+AGG 0.656588 5_4:+18067557 None:intergenic
CTACATTATCAACAGTGCAA+GGG 0.657965 5_4:-18067656 Msa0841610:CDS
ACCACATAGAGCCCCATTGG+GGG 0.661326 5_4:-18066850 Msa0841610:CDS
TACCACATAGAGCCCCATTG+GGG 0.680294 5_4:-18066851 Msa0841610:CDS
CCACATAGAGCCCCATTGGG+GGG 0.682285 5_4:-18066849 Msa0841610:CDS
GACACCTGTGAAATAGTTGG+TGG 0.682466 5_4:-18066635 Msa0841610:three_prime_UTR
ATGATAACAGATGGCCACCA+TGG 0.683499 5_4:-18068276 Msa0841610:CDS
ACCAAGAGAACAGAACCGGA+AGG 0.684862 5_4:+18067546 None:intergenic
TCTGTAATTAACTGAAGTTG+GGG 0.688523 5_4:+18066896 None:intergenic
AATGTGAATTGCAGATTGTG+GGG 0.690938 5_4:-18067055 Msa0841610:intron
TAGTATTATATATATATCAG+GGG 0.691788 5_4:+18066774 None:intergenic
CTGATGATGATGATAACAGA+TGG 0.692210 5_4:-18068285 Msa0841610:CDS
GACAAACCTGAATGTAACGG+TGG 0.716496 5_4:+18068116 None:intergenic
GCAAGACAGAGAGAACAGAG+AGG 0.742658 5_4:+18068151 None:intergenic
CTGTAATTAACTGAAGTTGG+GGG 0.746847 5_4:+18066897 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAGTATTATATATATATCA+GGG + chr5_4:18068236-18068255 None:intergenic 10.0%
!! ATTAGTATTATATATATATC+AGG + chr5_4:18068237-18068256 None:intergenic 10.0%
!! TTAGTATTATATATATATCA+GGG + chr5_4:18068236-18068255 None:intergenic 10.0%
!! ATTAGTATTATATATATATC+AGG + chr5_4:18068237-18068256 None:intergenic 10.0%
!!! TTTTGATTTGATTTTTGAAT+AGG - chr5_4:18066686-18066705 Msa0841610:three_prime_UTR 15.0%
!!! TTTGATTTGATTTTTGAATA+GGG - chr5_4:18066687-18066706 Msa0841610:three_prime_UTR 15.0%
!! TAGTATTATATATATATCAG+GGG + chr5_4:18068235-18068254 None:intergenic 15.0%
!!! AAGTAAGTCTTTTTTAATAT+AGG - chr5_4:18068444-18068463 Msa0841610:intron 15.0%
!! TTTACAAAGATTAAGTAAAA+AGG - chr5_4:18068671-18068690 Msa0841610:five_prime_UTR 15.0%
!! TTACAAAGATTAAGTAAAAA+GGG - chr5_4:18068672-18068691 Msa0841610:five_prime_UTR 15.0%
!!! TTTTGATTTGATTTTTGAAT+AGG - chr5_4:18066686-18066705 Msa0841610:three_prime_UTR 15.0%
!!! TTTGATTTGATTTTTGAATA+GGG - chr5_4:18066687-18066706 Msa0841610:three_prime_UTR 15.0%
!! TAGTATTATATATATATCAG+GGG + chr5_4:18068235-18068254 None:intergenic 15.0%
!!! AAGTAAGTCTTTTTTAATAT+AGG - chr5_4:18068444-18068463 Msa0841610:intron 15.0%
!! TTTACAAAGATTAAGTAAAA+AGG - chr5_4:18068671-18068690 Msa0841610:five_prime_UTR 15.0%
!! TTACAAAGATTAAGTAAAAA+GGG - chr5_4:18068672-18068691 Msa0841610:five_prime_UTR 15.0%
!! TGAATGTAATATGTATTGTT+TGG - chr5_4:18066818-18066837 Msa0841610:exon 20.0%
!!! AAAGTTTGGTTTTTTTTTTG+TGG - chr5_4:18067184-18067203 Msa0841610:intron 20.0%
!! AATTAAACATTAGACATCAA+TGG + chr5_4:18067215-18067234 None:intergenic 20.0%
!!! CTAAAGTTTGTTTTTTTGTA+TGG - chr5_4:18067241-18067260 Msa0841610:intron 20.0%
!! AATAATTGATGAGAATACAT+TGG + chr5_4:18067521-18067540 None:intergenic 20.0%
!!! CTAGTAAAGAAACTTTTTAT+GGG - chr5_4:18067719-18067738 Msa0841610:CDS 20.0%
!!! ATCCTTCAATTTAATCTTTT+TGG - chr5_4:18067803-18067822 Msa0841610:intron 20.0%
!! ATTAAAAAAACCATGAATGT+TGG - chr5_4:18067844-18067863 Msa0841610:intron 20.0%
!! TTAAAAAAACCATGAATGTT+GGG - chr5_4:18067845-18067864 Msa0841610:intron 20.0%
!! AAACTTAGGTATAATTACTT+TGG + chr5_4:18068479-18068498 None:intergenic 20.0%
!!! TAAATATTGGTTTAGTAAGT+GGG - chr5_4:18068513-18068532 Msa0841610:exon 20.0%
!! GGTATTAGAAAAAATAAAAG+AGG - chr5_4:18068589-18068608 Msa0841610:five_prime_UTR 20.0%
!! TGAATGTAATATGTATTGTT+TGG - chr5_4:18066818-18066837 Msa0841610:exon 20.0%
!!! AAAGTTTGGTTTTTTTTTTG+TGG - chr5_4:18067184-18067203 Msa0841610:intron 20.0%
!! AATTAAACATTAGACATCAA+TGG + chr5_4:18067215-18067234 None:intergenic 20.0%
!!! CTAAAGTTTGTTTTTTTGTA+TGG - chr5_4:18067241-18067260 Msa0841610:intron 20.0%
!! AATAATTGATGAGAATACAT+TGG + chr5_4:18067521-18067540 None:intergenic 20.0%
!!! CTAGTAAAGAAACTTTTTAT+GGG - chr5_4:18067719-18067738 Msa0841610:CDS 20.0%
!!! ATCCTTCAATTTAATCTTTT+TGG - chr5_4:18067803-18067822 Msa0841610:intron 20.0%
!! ATTAAAAAAACCATGAATGT+TGG - chr5_4:18067844-18067863 Msa0841610:intron 20.0%
!! TTAAAAAAACCATGAATGTT+GGG - chr5_4:18067845-18067864 Msa0841610:intron 20.0%
!! AAACTTAGGTATAATTACTT+TGG + chr5_4:18068479-18068498 None:intergenic 20.0%
!!! TAAATATTGGTTTAGTAAGT+GGG - chr5_4:18068513-18068532 Msa0841610:exon 20.0%
!! GGTATTAGAAAAAATAAAAG+AGG - chr5_4:18068589-18068608 Msa0841610:five_prime_UTR 20.0%
! TATTGTTTGGATTGTATGAA+TGG - chr5_4:18066831-18066850 Msa0841610:CDS 25.0%
!! CTTATAATCTGACACATTTT+TGG - chr5_4:18066961-18066980 Msa0841610:CDS 25.0%
!! TTATAGATTCGTTCTTTTTC+TGG - chr5_4:18066996-18067015 Msa0841610:CDS 25.0%
!! TATAGATTCGTTCTTTTTCT+GGG - chr5_4:18066997-18067016 Msa0841610:CDS 25.0%
!! ATCTAAGTGTTATTCTGAAA+TGG - chr5_4:18067062-18067081 Msa0841610:intron 25.0%
!!! TCTAAGTGTTATTCTGAAAT+GGG - chr5_4:18067063-18067082 Msa0841610:intron 25.0%
! AATAGCTGAAAATCAGTAAA+AGG + chr5_4:18067106-18067125 None:intergenic 25.0%
! AATTAGACATTAGACATCAA+TGG + chr5_4:18067156-18067175 None:intergenic 25.0%
! CTAATTAATGTGCTAAAGTT+TGG - chr5_4:18067170-18067189 Msa0841610:intron 25.0%
!! GCTAGTAAAGAAACTTTTTA+TGG - chr5_4:18067718-18067737 Msa0841610:CDS 25.0%
! TGCCAAAAAGATTAAATTGA+AGG + chr5_4:18067808-18067827 None:intergenic 25.0%
!!! AGTTATGATTTTGACAAAGA+TGG + chr5_4:18067892-18067911 None:intergenic 25.0%
! TTCTGTAATTAACTGAAGTT+GGG + chr5_4:18068114-18068133 None:intergenic 25.0%
!! GTAATTATACCTAAGTTTTG+TGG - chr5_4:18068481-18068500 Msa0841610:CDS 25.0%
!!! GTAAATATTGGTTTAGTAAG+TGG - chr5_4:18068512-18068531 Msa0841610:exon 25.0%
!!! AAATATTGGTTTAGTAAGTG+GGG - chr5_4:18068514-18068533 Msa0841610:exon 25.0%
!!! AAAGGTGCTATATCTAAATA+TGG - chr5_4:18068568-18068587 Msa0841610:five_prime_UTR 25.0%
!! GTTTTTAAATGTCGAACAAT+GGG + chr5_4:18068651-18068670 None:intergenic 25.0%
!! AGTTTTTAAATGTCGAACAA+TGG + chr5_4:18068652-18068671 None:intergenic 25.0%
! TATTGTTTGGATTGTATGAA+TGG - chr5_4:18066831-18066850 Msa0841610:CDS 25.0%
!! CTTATAATCTGACACATTTT+TGG - chr5_4:18066961-18066980 Msa0841610:CDS 25.0%
!! TTATAGATTCGTTCTTTTTC+TGG - chr5_4:18066996-18067015 Msa0841610:CDS 25.0%
!! TATAGATTCGTTCTTTTTCT+GGG - chr5_4:18066997-18067016 Msa0841610:CDS 25.0%
!! ATCTAAGTGTTATTCTGAAA+TGG - chr5_4:18067062-18067081 Msa0841610:intron 25.0%
!!! TCTAAGTGTTATTCTGAAAT+GGG - chr5_4:18067063-18067082 Msa0841610:intron 25.0%
! AATAGCTGAAAATCAGTAAA+AGG + chr5_4:18067106-18067125 None:intergenic 25.0%
! AATTAGACATTAGACATCAA+TGG + chr5_4:18067156-18067175 None:intergenic 25.0%
! CTAATTAATGTGCTAAAGTT+TGG - chr5_4:18067170-18067189 Msa0841610:intron 25.0%
!! GCTAGTAAAGAAACTTTTTA+TGG - chr5_4:18067718-18067737 Msa0841610:CDS 25.0%
! TGCCAAAAAGATTAAATTGA+AGG + chr5_4:18067808-18067827 None:intergenic 25.0%
!!! AGTTATGATTTTGACAAAGA+TGG + chr5_4:18067892-18067911 None:intergenic 25.0%
! TTCTGTAATTAACTGAAGTT+GGG + chr5_4:18068114-18068133 None:intergenic 25.0%
!! GTAATTATACCTAAGTTTTG+TGG - chr5_4:18068481-18068500 Msa0841610:CDS 25.0%
!!! GTAAATATTGGTTTAGTAAG+TGG - chr5_4:18068512-18068531 Msa0841610:exon 25.0%
!!! AAATATTGGTTTAGTAAGTG+GGG - chr5_4:18068514-18068533 Msa0841610:exon 25.0%
!!! AAAGGTGCTATATCTAAATA+TGG - chr5_4:18068568-18068587 Msa0841610:five_prime_UTR 25.0%
!! GTTTTTAAATGTCGAACAAT+GGG + chr5_4:18068651-18068670 None:intergenic 25.0%
!! AGTTTTTAAATGTCGAACAA+TGG + chr5_4:18068652-18068671 None:intergenic 25.0%
GTGAAAAAGTGAAAGATGTT+TGG + chr5_4:18066461-18066480 None:intergenic 30.0%
! TCTTGATTTTCAATTGCCAT+TGG + chr5_4:18066507-18066526 None:intergenic 30.0%
ATCTAGCATTAGATTCTTGA+TGG - chr5_4:18066582-18066601 Msa0841610:three_prime_UTR 30.0%
TCTAGCATTAGATTCTTGAT+GGG - chr5_4:18066583-18066602 Msa0841610:three_prime_UTR 30.0%
AAGAAAGCTTCTTTCAACAA+TGG + chr5_4:18066762-18066781 None:intergenic 30.0%
TTGTATGGTTTGAACAGATT+AGG - chr5_4:18067256-18067275 Msa0841610:intron 30.0%
TTCATACCATGATGTGATAA+GGG - chr5_4:18067284-18067303 Msa0841610:intron 30.0%
AATTGATGAGAATACATTGG+TGG + chr5_4:18067518-18067537 None:intergenic 30.0%
ACTATAACAATGTTGTGTAG+CGG - chr5_4:18067619-18067638 Msa0841610:CDS 30.0%
! TTATGGGTTAAAATGAGTTG+AGG - chr5_4:18067735-18067754 Msa0841610:CDS 30.0%
!!! TGAGGTTGACTTTTTCATAA+TGG - chr5_4:18067753-18067772 Msa0841610:intron 30.0%
!!! GAGGTTGACTTTTTCATAAT+GGG - chr5_4:18067754-18067773 Msa0841610:intron 30.0%
TATTCAAATCCCAACATTCA+TGG + chr5_4:18067857-18067876 None:intergenic 30.0%
! TTAATTGTCTCCTTTTCTTC+TGG + chr5_4:18067991-18068010 None:intergenic 30.0%
!! GAACTTTGATTTTCTTCTGA+CGG + chr5_4:18068066-18068085 None:intergenic 30.0%
TCTGTAATTAACTGAAGTTG+GGG + chr5_4:18068113-18068132 None:intergenic 30.0%
GTTCTGTAATTAACTGAAGT+TGG + chr5_4:18068115-18068134 None:intergenic 30.0%
AGCAAAAATCCAAATAGAAG+TGG - chr5_4:18068321-18068340 Msa0841610:intron 30.0%
AATCCAAATAGAAGTGGAAA+AGG - chr5_4:18068327-18068346 Msa0841610:intron 30.0%
GTGCATTTAGCAAAAAGAAT+GGG - chr5_4:18068393-18068412 Msa0841610:intron 30.0%
TGCATTTAGCAAAAAGAATG+GGG - chr5_4:18068394-18068413 Msa0841610:intron 30.0%
! GTGGTTGATGTTGTAAATAT+TGG - chr5_4:18068500-18068519 Msa0841610:CDS 30.0%
AAAATGTACTCCTTGGAAAA+AGG - chr5_4:18068550-18068569 Msa0841610:five_prime_UTR 30.0%
CAAAGATTAAGTAAAAAGGG+TGG - chr5_4:18068675-18068694 Msa0841610:five_prime_UTR 30.0%
GTGAAAAAGTGAAAGATGTT+TGG + chr5_4:18066461-18066480 None:intergenic 30.0%
! TCTTGATTTTCAATTGCCAT+TGG + chr5_4:18066507-18066526 None:intergenic 30.0%
ATCTAGCATTAGATTCTTGA+TGG - chr5_4:18066582-18066601 Msa0841610:three_prime_UTR 30.0%
TCTAGCATTAGATTCTTGAT+GGG - chr5_4:18066583-18066602 Msa0841610:three_prime_UTR 30.0%
AAGAAAGCTTCTTTCAACAA+TGG + chr5_4:18066762-18066781 None:intergenic 30.0%
TTGTATGGTTTGAACAGATT+AGG - chr5_4:18067256-18067275 Msa0841610:intron 30.0%
TTCATACCATGATGTGATAA+GGG - chr5_4:18067284-18067303 Msa0841610:intron 30.0%
AATTGATGAGAATACATTGG+TGG + chr5_4:18067518-18067537 None:intergenic 30.0%
ACTATAACAATGTTGTGTAG+CGG - chr5_4:18067619-18067638 Msa0841610:CDS 30.0%
! TTATGGGTTAAAATGAGTTG+AGG - chr5_4:18067735-18067754 Msa0841610:CDS 30.0%
!!! TGAGGTTGACTTTTTCATAA+TGG - chr5_4:18067753-18067772 Msa0841610:intron 30.0%
!!! GAGGTTGACTTTTTCATAAT+GGG - chr5_4:18067754-18067773 Msa0841610:intron 30.0%
TATTCAAATCCCAACATTCA+TGG + chr5_4:18067857-18067876 None:intergenic 30.0%
! TTAATTGTCTCCTTTTCTTC+TGG + chr5_4:18067991-18068010 None:intergenic 30.0%
!! GAACTTTGATTTTCTTCTGA+CGG + chr5_4:18068066-18068085 None:intergenic 30.0%
TCTGTAATTAACTGAAGTTG+GGG + chr5_4:18068113-18068132 None:intergenic 30.0%
GTTCTGTAATTAACTGAAGT+TGG + chr5_4:18068115-18068134 None:intergenic 30.0%
AGCAAAAATCCAAATAGAAG+TGG - chr5_4:18068321-18068340 Msa0841610:intron 30.0%
AATCCAAATAGAAGTGGAAA+AGG - chr5_4:18068327-18068346 Msa0841610:intron 30.0%
GTGCATTTAGCAAAAAGAAT+GGG - chr5_4:18068393-18068412 Msa0841610:intron 30.0%
TGCATTTAGCAAAAAGAATG+GGG - chr5_4:18068394-18068413 Msa0841610:intron 30.0%
! GTGGTTGATGTTGTAAATAT+TGG - chr5_4:18068500-18068519 Msa0841610:CDS 30.0%
AAAATGTACTCCTTGGAAAA+AGG - chr5_4:18068550-18068569 Msa0841610:five_prime_UTR 30.0%
CAAAGATTAAGTAAAAAGGG+TGG - chr5_4:18068675-18068694 Msa0841610:five_prime_UTR 30.0%
TGAGAAGTAAAGAAGAGTGA+GGG + chr5_4:18066358-18066377 None:intergenic 35.0%
TTGAGAAGTAAAGAAGAGTG+AGG + chr5_4:18066359-18066378 None:intergenic 35.0%
GAGAAATCAAACCAAAGAAC+AGG - chr5_4:18066541-18066560 Msa0841610:three_prime_UTR 35.0%
! TTGATTTTTGAATAGGGTGC+TGG - chr5_4:18066693-18066712 Msa0841610:three_prime_UTR 35.0%
CATCTGTTATCATCATCATC+AGG + chr5_4:18066723-18066742 None:intergenic 35.0%
! CTGATGATGATGATAACAGA+TGG - chr5_4:18066721-18066740 Msa0841610:three_prime_UTR 35.0%
TTCAACAATGGTTTCAACCA+TGG + chr5_4:18066750-18066769 None:intergenic 35.0%
GAAGACAAACCTGAATGTAA+CGG + chr5_4:18066896-18066915 None:intergenic 35.0%
!!! TCTGACACATTTTTGGTTCA+TGG - chr5_4:18066968-18066987 Msa0841610:CDS 35.0%
!!! CTGACACATTTTTGGTTCAT+GGG - chr5_4:18066969-18066988 Msa0841610:CDS 35.0%
TATGGTTTGAACAGATTAGG+AGG - chr5_4:18067259-18067278 Msa0841610:intron 35.0%
CTTCATACCATGATGTGATA+AGG - chr5_4:18067283-18067302 Msa0841610:intron 35.0%
GAATGAGATTCAGAAACACT+TGG - chr5_4:18067308-18067327 Msa0841610:intron 35.0%
CTACATTATCAACAGTGCAA+GGG - chr5_4:18067350-18067369 Msa0841610:intron 35.0%
!! GGGTTGTGTTTTTGAATGAA+AGG - chr5_4:18067370-18067389 Msa0841610:intron 35.0%
CTGAACAAATCGCTATTGTT+CGG - chr5_4:18067553-18067572 Msa0841610:CDS 35.0%
TGAATGTGAATTGCAGATTG+TGG - chr5_4:18067949-18067968 Msa0841610:intron 35.0%
GAATGTGAATTGCAGATTGT+GGG - chr5_4:18067950-18067969 Msa0841610:intron 35.0%
AATGTGAATTGCAGATTGTG+GGG - chr5_4:18067951-18067970 Msa0841610:intron 35.0%
CTAAGAACTTCCAGAAGAAA+AGG - chr5_4:18067978-18067997 Msa0841610:intron 35.0%
AAGGAGACAATTAACAGCAA+TGG - chr5_4:18067997-18068016 Msa0841610:intron 35.0%
CTGTAATTAACTGAAGTTGG+GGG + chr5_4:18068112-18068131 None:intergenic 35.0%
! CAACCTTTTCCACTTCTATT+TGG + chr5_4:18068333-18068352 None:intergenic 35.0%
AATAGAAGTGGAAAAGGTTG+AGG - chr5_4:18068333-18068352 Msa0841610:intron 35.0%
AAAGACACCTGTGAAATAGT+TGG - chr5_4:18068368-18068387 Msa0841610:intron 35.0%
GGTGCATTTAGCAAAAAGAA+TGG - chr5_4:18068392-18068411 Msa0841610:intron 35.0%
CAACATCAACCACAAAACTT+AGG + chr5_4:18068493-18068512 None:intergenic 35.0%
GGAAATGAAAATGTACTCCT+TGG - chr5_4:18068543-18068562 Msa0841610:five_prime_UTR 35.0%
! AGATATAGCACCTTTTTCCA+AGG + chr5_4:18068563-18068582 None:intergenic 35.0%
TGAGAAGTAAAGAAGAGTGA+GGG + chr5_4:18066358-18066377 None:intergenic 35.0%
TTGAGAAGTAAAGAAGAGTG+AGG + chr5_4:18066359-18066378 None:intergenic 35.0%
GAGAAATCAAACCAAAGAAC+AGG - chr5_4:18066541-18066560 Msa0841610:three_prime_UTR 35.0%
! TTGATTTTTGAATAGGGTGC+TGG - chr5_4:18066693-18066712 Msa0841610:three_prime_UTR 35.0%
CATCTGTTATCATCATCATC+AGG + chr5_4:18066723-18066742 None:intergenic 35.0%
! CTGATGATGATGATAACAGA+TGG - chr5_4:18066721-18066740 Msa0841610:three_prime_UTR 35.0%
TTCAACAATGGTTTCAACCA+TGG + chr5_4:18066750-18066769 None:intergenic 35.0%
GAAGACAAACCTGAATGTAA+CGG + chr5_4:18066896-18066915 None:intergenic 35.0%
!!! TCTGACACATTTTTGGTTCA+TGG - chr5_4:18066968-18066987 Msa0841610:CDS 35.0%
!!! CTGACACATTTTTGGTTCAT+GGG - chr5_4:18066969-18066988 Msa0841610:CDS 35.0%
TATGGTTTGAACAGATTAGG+AGG - chr5_4:18067259-18067278 Msa0841610:intron 35.0%
CTTCATACCATGATGTGATA+AGG - chr5_4:18067283-18067302 Msa0841610:intron 35.0%
GAATGAGATTCAGAAACACT+TGG - chr5_4:18067308-18067327 Msa0841610:intron 35.0%
CTACATTATCAACAGTGCAA+GGG - chr5_4:18067350-18067369 Msa0841610:intron 35.0%
!! GGGTTGTGTTTTTGAATGAA+AGG - chr5_4:18067370-18067389 Msa0841610:intron 35.0%
CTGAACAAATCGCTATTGTT+CGG - chr5_4:18067553-18067572 Msa0841610:CDS 35.0%
TGAATGTGAATTGCAGATTG+TGG - chr5_4:18067949-18067968 Msa0841610:intron 35.0%
GAATGTGAATTGCAGATTGT+GGG - chr5_4:18067950-18067969 Msa0841610:intron 35.0%
AATGTGAATTGCAGATTGTG+GGG - chr5_4:18067951-18067970 Msa0841610:intron 35.0%
CTAAGAACTTCCAGAAGAAA+AGG - chr5_4:18067978-18067997 Msa0841610:intron 35.0%
AAGGAGACAATTAACAGCAA+TGG - chr5_4:18067997-18068016 Msa0841610:intron 35.0%
CTGTAATTAACTGAAGTTGG+GGG + chr5_4:18068112-18068131 None:intergenic 35.0%
! CAACCTTTTCCACTTCTATT+TGG + chr5_4:18068333-18068352 None:intergenic 35.0%
AATAGAAGTGGAAAAGGTTG+AGG - chr5_4:18068333-18068352 Msa0841610:intron 35.0%
AAAGACACCTGTGAAATAGT+TGG - chr5_4:18068368-18068387 Msa0841610:intron 35.0%
GGTGCATTTAGCAAAAAGAA+TGG - chr5_4:18068392-18068411 Msa0841610:intron 35.0%
CAACATCAACCACAAAACTT+AGG + chr5_4:18068493-18068512 None:intergenic 35.0%
GGAAATGAAAATGTACTCCT+TGG - chr5_4:18068543-18068562 Msa0841610:five_prime_UTR 35.0%
! AGATATAGCACCTTTTTCCA+AGG + chr5_4:18068563-18068582 None:intergenic 35.0%
AAGTAAAGAAGAGTGAGGGA+GGG + chr5_4:18066354-18066373 None:intergenic 40.0%
GAGAGAGAAGCAGCAAAATA+GGG + chr5_4:18066397-18066416 None:intergenic 40.0%
AGAGAGAGAAGCAGCAAAAT+AGG + chr5_4:18066398-18066417 None:intergenic 40.0%
CTTCAAACCAAACACACCAA+TGG - chr5_4:18066488-18066507 Msa0841610:three_prime_UTR 40.0%
TCAATTGCCATTGGTGTGTT+TGG + chr5_4:18066498-18066517 None:intergenic 40.0%
! TGGTTTGATTTCTCTGACAC+TGG + chr5_4:18066535-18066554 None:intergenic 40.0%
ACCAAAGAACAGGAGAATCA+TGG - chr5_4:18066551-18066570 Msa0841610:three_prime_UTR 40.0%
ACCATGATTCTCCTGTTCTT+TGG + chr5_4:18066555-18066574 None:intergenic 40.0%
!!! ATTTTTGAATAGGGTGCTGG+AGG - chr5_4:18066696-18066715 Msa0841610:three_prime_UTR 40.0%
AACAATGGTTTCAACCATGG+TGG + chr5_4:18066747-18066766 None:intergenic 40.0%
CTCAGCACAGAAAACAAAAG+TGG + chr5_4:18067042-18067061 None:intergenic 40.0%
CATTCACCCTTATCACATCA+TGG + chr5_4:18067293-18067312 None:intergenic 40.0%
!! CCTTGCACTGTTGATAATGT+AGG + chr5_4:18067352-18067371 None:intergenic 40.0%
CCTACATTATCAACAGTGCA+AGG - chr5_4:18067349-18067368 Msa0841610:intron 40.0%
CAAGAGTCTCGTGAATCAAA+TGG + chr5_4:18067782-18067801 None:intergenic 40.0%
TAATTAACTGAAGTTGGGGG+TGG + chr5_4:18068109-18068128 None:intergenic 40.0%
AGAACAGCCAAGAGAAGAAA+GGG - chr5_4:18068130-18068149 Msa0841610:CDS 40.0%
TGGTATTCCCTTTCTTCTCT+TGG + chr5_4:18068140-18068159 None:intergenic 40.0%
!!! TACTTGTTTTGCTACACGCA+CGG + chr5_4:18068429-18068448 None:intergenic 40.0%
GTTTAGTAAGTGGGGAAGAA+AGG - chr5_4:18068522-18068541 Msa0841610:five_prime_UTR 40.0%
AAGTAAAGAAGAGTGAGGGA+GGG + chr5_4:18066354-18066373 None:intergenic 40.0%
GAGAGAGAAGCAGCAAAATA+GGG + chr5_4:18066397-18066416 None:intergenic 40.0%
AGAGAGAGAAGCAGCAAAAT+AGG + chr5_4:18066398-18066417 None:intergenic 40.0%
CTTCAAACCAAACACACCAA+TGG - chr5_4:18066488-18066507 Msa0841610:three_prime_UTR 40.0%
TCAATTGCCATTGGTGTGTT+TGG + chr5_4:18066498-18066517 None:intergenic 40.0%
! TGGTTTGATTTCTCTGACAC+TGG + chr5_4:18066535-18066554 None:intergenic 40.0%
ACCAAAGAACAGGAGAATCA+TGG - chr5_4:18066551-18066570 Msa0841610:three_prime_UTR 40.0%
ACCATGATTCTCCTGTTCTT+TGG + chr5_4:18066555-18066574 None:intergenic 40.0%
!!! ATTTTTGAATAGGGTGCTGG+AGG - chr5_4:18066696-18066715 Msa0841610:three_prime_UTR 40.0%
AACAATGGTTTCAACCATGG+TGG + chr5_4:18066747-18066766 None:intergenic 40.0%
CTCAGCACAGAAAACAAAAG+TGG + chr5_4:18067042-18067061 None:intergenic 40.0%
CATTCACCCTTATCACATCA+TGG + chr5_4:18067293-18067312 None:intergenic 40.0%
!! CCTTGCACTGTTGATAATGT+AGG + chr5_4:18067352-18067371 None:intergenic 40.0%
CCTACATTATCAACAGTGCA+AGG - chr5_4:18067349-18067368 Msa0841610:intron 40.0%
CAAGAGTCTCGTGAATCAAA+TGG + chr5_4:18067782-18067801 None:intergenic 40.0%
TAATTAACTGAAGTTGGGGG+TGG + chr5_4:18068109-18068128 None:intergenic 40.0%
AGAACAGCCAAGAGAAGAAA+GGG - chr5_4:18068130-18068149 Msa0841610:CDS 40.0%
TGGTATTCCCTTTCTTCTCT+TGG + chr5_4:18068140-18068159 None:intergenic 40.0%
!!! TACTTGTTTTGCTACACGCA+CGG + chr5_4:18068429-18068448 None:intergenic 40.0%
GTTTAGTAAGTGGGGAAGAA+AGG - chr5_4:18068522-18068541 Msa0841610:five_prime_UTR 40.0%
GAAGTAAAGAAGAGTGAGGG+AGG + chr5_4:18066355-18066374 None:intergenic 45.0%
ATGATAACAGATGGCCACCA+TGG - chr5_4:18066730-18066749 Msa0841610:three_prime_UTR 45.0%
GAATGTAACGGTGGTCTTTG+TGG + chr5_4:18066884-18066903 None:intergenic 45.0%
CAAAGACCACCGTTACATTC+AGG - chr5_4:18066884-18066903 Msa0841610:CDS 45.0%
GACAAACCTGAATGTAACGG+TGG + chr5_4:18066893-18066912 None:intergenic 45.0%
CAGAAACACTTGGACATTGC+TGG - chr5_4:18067318-18067337 Msa0841610:intron 45.0%
TGAATGAAAGGCCTCAACCA+AGG - chr5_4:18067382-18067401 Msa0841610:intron 45.0%
! GTGTTTGTGACACCTTTTCC+TGG + chr5_4:18067408-18067427 None:intergenic 45.0%
GTAGCCTTCTTGATTCCTTC+CGG - chr5_4:18067445-18067464 Msa0841610:intron 45.0%
AGAACCGGAAGGAATCAAGA+AGG + chr5_4:18067452-18067471 None:intergenic 45.0%
TGCAACCAAGAGAACAGAAC+CGG + chr5_4:18067467-18067486 None:intergenic 45.0%
GTTCTGTTCTCTTGGTTGCA+AGG - chr5_4:18067467-18067486 Msa0841610:intron 45.0%
AGCAATGGCATCAGATTCTG+AGG - chr5_4:18068012-18068031 Msa0841610:intron 45.0%
CAGAACAGCCAAGAGAAGAA+AGG - chr5_4:18068129-18068148 Msa0841610:CDS 45.0%
AATACCACATAGAGCCCCAT+TGG - chr5_4:18068153-18068172 Msa0841610:CDS 45.0%
ATACCACATAGAGCCCCATT+GGG - chr5_4:18068154-18068173 Msa0841610:CDS 45.0%
GACACCTGTGAAATAGTTGG+TGG - chr5_4:18068371-18068390 Msa0841610:intron 45.0%
TGCACCACCAACTATTTCAC+AGG + chr5_4:18068378-18068397 None:intergenic 45.0%
!!! ACTTGTTTTGCTACACGCAC+GGG + chr5_4:18068428-18068447 None:intergenic 45.0%
GAAGTAAAGAAGAGTGAGGG+AGG + chr5_4:18066355-18066374 None:intergenic 45.0%
ATGATAACAGATGGCCACCA+TGG - chr5_4:18066730-18066749 Msa0841610:three_prime_UTR 45.0%
GAATGTAACGGTGGTCTTTG+TGG + chr5_4:18066884-18066903 None:intergenic 45.0%
CAAAGACCACCGTTACATTC+AGG - chr5_4:18066884-18066903 Msa0841610:CDS 45.0%
GACAAACCTGAATGTAACGG+TGG + chr5_4:18066893-18066912 None:intergenic 45.0%
CAGAAACACTTGGACATTGC+TGG - chr5_4:18067318-18067337 Msa0841610:intron 45.0%
TGAATGAAAGGCCTCAACCA+AGG - chr5_4:18067382-18067401 Msa0841610:intron 45.0%
! GTGTTTGTGACACCTTTTCC+TGG + chr5_4:18067408-18067427 None:intergenic 45.0%
GTAGCCTTCTTGATTCCTTC+CGG - chr5_4:18067445-18067464 Msa0841610:intron 45.0%
AGAACCGGAAGGAATCAAGA+AGG + chr5_4:18067452-18067471 None:intergenic 45.0%
TGCAACCAAGAGAACAGAAC+CGG + chr5_4:18067467-18067486 None:intergenic 45.0%
GTTCTGTTCTCTTGGTTGCA+AGG - chr5_4:18067467-18067486 Msa0841610:intron 45.0%
AGCAATGGCATCAGATTCTG+AGG - chr5_4:18068012-18068031 Msa0841610:intron 45.0%
CAGAACAGCCAAGAGAAGAA+AGG - chr5_4:18068129-18068148 Msa0841610:CDS 45.0%
AATACCACATAGAGCCCCAT+TGG - chr5_4:18068153-18068172 Msa0841610:CDS 45.0%
ATACCACATAGAGCCCCATT+GGG - chr5_4:18068154-18068173 Msa0841610:CDS 45.0%
GACACCTGTGAAATAGTTGG+TGG - chr5_4:18068371-18068390 Msa0841610:intron 45.0%
TGCACCACCAACTATTTCAC+AGG + chr5_4:18068378-18068397 None:intergenic 45.0%
!!! ACTTGTTTTGCTACACGCAC+GGG + chr5_4:18068428-18068447 None:intergenic 45.0%
GTTCTTGTAGGGCTTGGAAG+CGG + chr5_4:18066326-18066345 None:intergenic 50.0%
! GAATGGGTTCTTGTAGGGCT+TGG + chr5_4:18066332-18066351 None:intergenic 50.0%
! GGAGGGAATGGGTTCTTGTA+GGG + chr5_4:18066337-18066356 None:intergenic 50.0%
AGAAGAGTGAGGGAGGGAAT+GGG + chr5_4:18066348-18066367 None:intergenic 50.0%
AAGAAGAGTGAGGGAGGGAA+TGG + chr5_4:18066349-18066368 None:intergenic 50.0%
GCAAGACAGAGAGAACAGAG+AGG + chr5_4:18066858-18066877 None:intergenic 50.0%
TCCTTCCGGTTCTGTTCTCT+TGG - chr5_4:18067459-18067478 Msa0841610:intron 50.0%
ACCAAGAGAACAGAACCGGA+AGG + chr5_4:18067463-18067482 None:intergenic 50.0%
TACCACATAGAGCCCCATTG+GGG - chr5_4:18068155-18068174 Msa0841610:CDS 50.0%
TAGATCAAGTCCCCCCAATG+GGG + chr5_4:18068170-18068189 None:intergenic 50.0%
CTAGATCAAGTCCCCCCAAT+GGG + chr5_4:18068171-18068190 None:intergenic 50.0%
TCTAGATCAAGTCCCCCCAA+TGG + chr5_4:18068172-18068191 None:intergenic 50.0%
GTTCTTGTAGGGCTTGGAAG+CGG + chr5_4:18066326-18066345 None:intergenic 50.0%
! GAATGGGTTCTTGTAGGGCT+TGG + chr5_4:18066332-18066351 None:intergenic 50.0%
! GGAGGGAATGGGTTCTTGTA+GGG + chr5_4:18066337-18066356 None:intergenic 50.0%
AGAAGAGTGAGGGAGGGAAT+GGG + chr5_4:18066348-18066367 None:intergenic 50.0%
AAGAAGAGTGAGGGAGGGAA+TGG + chr5_4:18066349-18066368 None:intergenic 50.0%
GCAAGACAGAGAGAACAGAG+AGG + chr5_4:18066858-18066877 None:intergenic 50.0%
TCCTTCCGGTTCTGTTCTCT+TGG - chr5_4:18067459-18067478 Msa0841610:intron 50.0%
ACCAAGAGAACAGAACCGGA+AGG + chr5_4:18067463-18067482 None:intergenic 50.0%
TACCACATAGAGCCCCATTG+GGG - chr5_4:18068155-18068174 Msa0841610:CDS 50.0%
TAGATCAAGTCCCCCCAATG+GGG + chr5_4:18068170-18068189 None:intergenic 50.0%
CTAGATCAAGTCCCCCCAAT+GGG + chr5_4:18068171-18068190 None:intergenic 50.0%
TCTAGATCAAGTCCCCCCAA+TGG + chr5_4:18068172-18068191 None:intergenic 50.0%
! GGGAGGGAATGGGTTCTTGT+AGG + chr5_4:18066338-18066357 None:intergenic 55.0%
!!! CCTTTTCCTGGCCTTGGTTG+AGG + chr5_4:18067396-18067415 None:intergenic 55.0%
CCTCAACCAAGGCCAGGAAA+AGG - chr5_4:18067393-18067412 Msa0841610:intron 55.0%
! GTGACACCTTTTCCTGGCCT+TGG + chr5_4:18067402-18067421 None:intergenic 55.0%
GAAGTTGGGGGTGGTGTAGA+TGG + chr5_4:18068100-18068119 None:intergenic 55.0%
ACCACATAGAGCCCCATTGG+GGG - chr5_4:18068156-18068175 Msa0841610:CDS 55.0%
! GGGAGGGAATGGGTTCTTGT+AGG + chr5_4:18066338-18066357 None:intergenic 55.0%
!!! CCTTTTCCTGGCCTTGGTTG+AGG + chr5_4:18067396-18067415 None:intergenic 55.0%
CCTCAACCAAGGCCAGGAAA+AGG - chr5_4:18067393-18067412 Msa0841610:intron 55.0%
! GTGACACCTTTTCCTGGCCT+TGG + chr5_4:18067402-18067421 None:intergenic 55.0%
GAAGTTGGGGGTGGTGTAGA+TGG + chr5_4:18068100-18068119 None:intergenic 55.0%
ACCACATAGAGCCCCATTGG+GGG - chr5_4:18068156-18068175 Msa0841610:CDS 55.0%
GAAAGGCCTCAACCAAGGCC+AGG - chr5_4:18067387-18067406 Msa0841610:intron 60.0%
CCACATAGAGCCCCATTGGG+GGG - chr5_4:18068157-18068176 Msa0841610:CDS 60.0%
GAAAGGCCTCAACCAAGGCC+AGG - chr5_4:18067387-18067406 Msa0841610:intron 60.0%
CCACATAGAGCCCCATTGGG+GGG - chr5_4:18068157-18068176 Msa0841610:CDS 60.0%
CCCCCCAATGGGGCTCTATG+TGG + chr5_4:18068160-18068179 None:intergenic 65.0%
CCCCCCAATGGGGCTCTATG+TGG + chr5_4:18068160-18068179 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 18066305 18068723 18066305 ID=Msa0841610;Name=Msa0841610
chr5_4 mRNA 18066305 18068723 18066305 ID=Msa0841610-mRNA-1;Parent=Msa0841610;Name=Msa0841610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=202|1|1|1|1|1|4|525|237
chr5_4 exon 18066305 18067063 18066305 ID=Msa0841610-mRNA-1:exon:7606;Parent=Msa0841610-mRNA-1
chr5_4 exon 18067540 18067755 18067540 ID=Msa0841610-mRNA-1:exon:7605;Parent=Msa0841610-mRNA-1
chr5_4 exon 18068123 18068320 18068123 ID=Msa0841610-mRNA-1:exon:7604;Parent=Msa0841610-mRNA-1
chr5_4 exon 18068456 18068723 18068456 ID=Msa0841610-mRNA-1:exon:7603;Parent=Msa0841610-mRNA-1
chr5_4 five_prime_UTR 18068522 18068723 18068522 ID=Msa0841610-mRNA-1:five_prime_utr;Parent=Msa0841610-mRNA-1
chr5_4 CDS 18068456 18068521 18068456 ID=Msa0841610-mRNA-1:cds;Parent=Msa0841610-mRNA-1
chr5_4 CDS 18068123 18068320 18068123 ID=Msa0841610-mRNA-1:cds;Parent=Msa0841610-mRNA-1
chr5_4 CDS 18067540 18067755 18067540 ID=Msa0841610-mRNA-1:cds;Parent=Msa0841610-mRNA-1
chr5_4 CDS 18066830 18067063 18066830 ID=Msa0841610-mRNA-1:cds;Parent=Msa0841610-mRNA-1
chr5_4 three_prime_UTR 18066305 18066829 18066305 ID=Msa0841610-mRNA-1:three_prime_utr;Parent=Msa0841610-mRNA-1
Gene Sequence

>Msa0841610

ATGGCAATTGAAAATCAAGAAAACACCAGTGTCAGAGAAATCAAACCAAAGAACAGGAGAATCATGGGTGCTGGAGGACCTGATGATGATGATAACAGATGGCCACCATGGTTGAAACCATTGTTGAAAGAAGCTTTCTTTGTTCAATGCAAGATACATGCTGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAATGGTCCTCTCTGTTCTCTCTGTCTTGCTTACCACAAAGACCACCGTTACATTCAGATTAGGAGGTCTTCATACCATGATGTGATAAGGGTGAATGAGATTCAGAAACACTTGGACATTGCTGGTGTTCAAACCTACATTATCAACAGTGCAAGGGTTGTGTTTTTGAATGAAAGGCCTCAACCAAGGCCAGGAAAAGGTGTCACAAACACTTGTGAAGTTTGTGAGCGTAGCCTTCTTGATTCCTTCCGGTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACATCTAAGAACTTCCAGAAGAAAAGGAGACAATTAACAGCAATGGCATCAGATTCTGAGGAGTCATACAGTAGCAACAACATTCATAGCCGTCAGAAGAAAATCAAAGTTCAAAGCTTTACACCATCTACACCACCCCCAACTTCAGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACATAGAGCCCCATTGGGGGGACTTGATCTAGATTATTAG
Protein sequence

>Msa0841610

MAIENQENTSVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKEAFFVQCKIHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRYIQIRRSSYHDVIRVNEIQKHLDIAGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKKRRQLTAMASDSEESYSSNNIHSRQKKIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPLGGLDLDY*