AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0761780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761780 MtrunA17_Chr5g0412111 87.500 304 37 1 17 319 163 466 0.0 556
Msa0761780 MtrunA17_Chr5g0412131 82.410 307 49 2 17 319 169 474 4.98e-179 503
Msa0761780 MtrunA17_Chr5g0412101 77.524 307 65 1 17 319 169 475 3.59e-173 488
Msa0761780 MtrunA17_Chr5g0426401 43.312 314 164 9 9 314 3 310 2.47e-76 236
Msa0761780 MtrunA17_Chr5g0426431 44.295 298 156 7 21 312 182 475 1.87e-75 239
Msa0761780 MtrunA17_Chr7g0217881 40.067 297 174 4 21 314 166 461 8.57e-74 234
Msa0761780 MtrunA17_Chr3g0092641 43.643 291 154 7 28 312 189 475 1.00e-73 234
Msa0761780 MtrunA17_Chr6g0454291 38.721 297 178 4 21 314 181 476 1.35e-72 232
Msa0761780 MtrunA17_Chr2g0278711 41.528 301 168 5 21 314 177 476 1.65e-72 231
Msa0761780 MtrunA17_Chr6g0454201 37.013 308 188 5 10 314 176 480 2.02e-72 231
Msa0761780 MtrunA17_Chr6g0454401 39.394 297 176 4 21 314 185 480 2.09e-72 231
Msa0761780 MtrunA17_Chr6g0454121 38.926 298 178 4 18 312 180 476 2.91e-71 228
Msa0761780 MtrunA17_Chr6g0454191 38.961 308 182 5 10 314 176 480 1.02e-70 227
Msa0761780 MtrunA17_Chr6g0454141 38.411 302 178 5 18 314 181 479 1.36e-70 226
Msa0761780 MtrunA17_Chr6g0454181 37.662 308 186 5 10 314 175 479 4.45e-70 225
Msa0761780 MtrunA17_Chr6g0454261 37.748 302 174 5 21 314 184 479 5.42e-70 225
Msa0761780 MtrunA17_Chr6g0454271 38.163 283 172 3 35 314 4 286 8.91e-70 219
Msa0761780 MtrunA17_Chr6g0454361 37.415 294 180 4 21 311 185 477 9.02e-70 224
Msa0761780 MtrunA17_Chr6g0454131 38.762 307 180 6 10 312 174 476 1.31e-69 224
Msa0761780 MtrunA17_Chr6g0453961 36.741 313 183 6 10 314 184 489 2.31e-69 224
Msa0761780 MtrunA17_Chr6g0453951 37.037 297 183 4 21 314 231 526 9.50e-69 223
Msa0761780 MtrunA17_Chr6g0454301 39.519 291 171 4 28 314 441 730 2.16e-68 226
Msa0761780 MtrunA17_Chr6g0454301 42.667 225 126 3 91 312 3 227 3.06e-55 191
Msa0761780 MtrunA17_Chr5g0423981 37.248 298 179 5 22 314 150 444 2.89e-68 219
Msa0761780 MtrunA17_Chr6g0454331 35.714 322 197 5 2 314 158 478 8.85e-68 219
Msa0761780 MtrunA17_Chr6g0452771 37.710 297 181 4 21 314 184 479 1.66e-67 219
Msa0761780 MtrunA17_Chr6g0454341 37.716 289 175 4 28 312 188 475 1.93e-67 218
Msa0761780 MtrunA17_Chr6g0454151 38.284 303 171 6 18 312 181 475 5.98e-67 217
Msa0761780 MtrunA17_Chr3g0078841 37.370 289 176 4 28 312 188 475 9.16e-67 216
Msa0761780 MtrunA17_Chr6g0454211 37.143 315 178 6 10 314 462 766 1.26e-66 222
Msa0761780 MtrunA17_Chr6g0454211 35.514 214 106 4 21 233 54 236 1.07e-37 142
Msa0761780 MtrunA17_Chr4g0050341 38.721 297 163 5 28 311 197 487 1.67e-66 216
Msa0761780 MtrunA17_Chr8g0359821 37.621 311 182 8 10 314 173 477 2.37e-66 216
Msa0761780 MtrunA17_Chr3g0112771 38.978 313 173 7 10 316 153 453 2.85e-66 215
Msa0761780 MtrunA17_Chr8g0336331 38.144 291 175 4 28 314 187 476 3.32e-66 215
Msa0761780 MtrunA17_Chr3g0118691 37.294 303 183 4 18 314 181 482 3.21e-65 213
Msa0761780 MtrunA17_Chr3g0118701 36.877 301 183 4 18 312 181 480 3.49e-65 213
Msa0761780 MtrunA17_Chr3g0118661 38.411 302 176 5 18 312 179 477 1.56e-63 208
Msa0761780 MtrunA17_Chr6g0454351 36.364 297 168 5 21 314 186 464 4.50e-63 207
Msa0761780 MtrunA17_Chr3g0118771 35.762 302 187 4 17 312 186 486 1.22e-62 206
Msa0761780 MtrunA17_Chr3g0118671 35.333 300 187 4 18 311 172 470 2.00e-62 205
Msa0761780 MtrunA17_Chr6g0454321 37.591 274 164 5 28 296 188 459 1.23e-61 207
Msa0761780 MtrunA17_Chr3g0118721 34.982 283 178 3 38 314 7 289 5.00e-61 196
Msa0761780 MtrunA17_Chr3g0118711 34.708 291 183 4 30 314 191 480 8.65e-60 198
Msa0761780 MtrunA17_Chr3g0112761 39.446 289 162 6 35 316 169 451 1.48e-58 194
Msa0761780 MtrunA17_Chr4g0032331 39.262 298 157 10 28 316 169 451 2.69e-58 194
Msa0761780 MtrunA17_Chr6g0454221 42.035 226 127 3 91 312 3 228 2.35e-57 187
Msa0761780 MtrunA17_Chr6g0454171 36.090 266 147 6 54 312 58 307 3.31e-51 171
Msa0761780 MtrunA17_Chr7g0249981 35.088 285 171 6 39 316 188 465 1.00e-50 175
Msa0761780 MtrunA17_Chr8g0380531 35.452 299 181 8 27 317 166 460 1.97e-50 173
Msa0761780 MtrunA17_Chr7g0250001 33.803 284 177 5 35 311 165 444 2.01e-50 173
Msa0761780 MtrunA17_Chr3g0118751 32.667 300 170 5 17 312 171 442 5.33e-50 172
Msa0761780 MtrunA17_Chr5g0414331 34.641 306 187 7 21 318 157 457 6.32e-50 172
Msa0761780 MtrunA17_Chr8g0355011 32.899 307 160 7 10 314 99 361 2.13e-49 168
Msa0761780 MtrunA17_Chr6g0454251 39.648 227 132 4 10 234 172 395 2.98e-49 169
Msa0761780 MtrunA17_Chr5g0414321 35.274 292 177 6 35 318 168 455 4.63e-48 167
Msa0761780 MtrunA17_Chr3g0121991 35.714 308 177 7 27 314 239 545 3.20e-47 166
Msa0761780 MtrunA17_Chr8g0377921 33.993 303 178 8 28 311 161 460 6.83e-47 164
Msa0761780 MtrunA17_Chr6g0464881 35.135 296 170 10 28 311 166 451 9.54e-47 164
Msa0761780 MtrunA17_Chr1g0207981 33.445 299 187 7 28 318 182 476 1.33e-46 164
Msa0761780 MtrunA17_Chr7g0249961 36.441 236 139 5 91 319 33 264 6.02e-46 157
Msa0761780 MtrunA17_Chr6g0464871 33.904 292 179 8 28 311 178 463 4.93e-45 159
Msa0761780 MtrunA17_Chr7g0218821 34.256 289 158 9 39 315 183 451 5.82e-45 159
Msa0761780 MtrunA17_Chr4g0053321 33.852 257 158 5 66 311 221 476 1.09e-44 159
Msa0761780 MtrunA17_Chr7g0249931 32.069 290 181 7 35 316 201 482 1.82e-44 158
Msa0761780 MtrunA17_Chr8g0366391 35.390 308 184 7 25 318 175 481 4.06e-44 157
Msa0761780 MtrunA17_Chr7g0218811 33.216 283 165 7 39 313 182 448 4.36e-44 156
Msa0761780 MtrunA17_Chr6g0464921 34.000 300 169 10 28 311 166 452 8.98e-44 155
Msa0761780 MtrunA17_Chr4g0044511 32.492 317 183 10 24 318 201 508 1.04e-43 156
Msa0761780 MtrunA17_Chr8g0377941 35.099 302 166 9 28 314 175 461 2.15e-43 155
Msa0761780 MtrunA17_Chr6g0454371 41.176 170 98 2 147 314 1 170 3.46e-43 146
Msa0761780 MtrunA17_Chr7g0218831 32.862 283 166 6 39 313 172 438 4.40e-43 153
Msa0761780 MtrunA17_Chr3g0122001 35.577 312 172 8 27 314 646 952 4.49e-43 158
Msa0761780 MtrunA17_Chr3g0122001 34.494 316 171 8 27 314 166 473 4.58e-41 152
Msa0761780 MtrunA17_Chr8g0335141 34.539 304 168 10 27 310 172 464 4.78e-43 154
Msa0761780 MtrunA17_Chr5g0401721 31.081 296 193 6 25 311 174 467 7.66e-43 154
Msa0761780 MtrunA17_Chr5g0442581 33.540 322 161 11 28 314 173 476 1.15e-42 154
Msa0761780 MtrunA17_Chr4g0053501 31.313 297 186 8 28 311 170 461 1.25e-42 153
Msa0761780 MtrunA17_Chr5g0429711 33.538 325 179 12 11 318 161 465 2.70e-42 152
Msa0761780 MtrunA17_Chr8g0335161 33.225 307 168 11 27 310 170 462 7.54e-42 150
Msa0761780 MtrunA17_Chr6g0462531 32.226 301 175 7 28 312 175 462 7.93e-42 150
Msa0761780 MtrunA17_Chr8g0365811 31.683 303 180 9 34 316 664 959 8.03e-42 154
Msa0761780 MtrunA17_Chr8g0365811 31.939 263 161 7 34 281 182 441 1.13e-36 139
Msa0761780 MtrunA17_Chr1g0207951 34.241 257 155 6 66 315 322 571 8.34e-42 154
Msa0761780 MtrunA17_Chr1g0207951 34.630 257 153 5 66 314 859 1108 5.45e-40 149
Msa0761780 MtrunA17_Chr8g0373301 34.516 310 157 13 28 310 172 462 1.02e-41 150
Msa0761780 MtrunA17_Chr6g0462571 34.219 301 153 12 39 310 173 457 1.02e-41 150
Msa0761780 MtrunA17_Chr3g0098111 34.221 263 158 5 66 316 212 471 1.47e-41 150
Msa0761780 MtrunA17_Chr1g0207861 31.525 295 187 6 34 316 179 470 1.56e-41 150
Msa0761780 MtrunA17_Chr7g0218841 33.099 284 165 7 39 313 172 439 1.63e-41 149
Msa0761780 MtrunA17_Chr1g0207931 34.884 258 153 7 70 315 244 498 2.51e-41 150
Msa0761780 MtrunA17_Chr6g0486251 32.523 329 178 12 6 310 152 460 2.57e-41 149
Msa0761780 MtrunA17_Chr6g0486201 32.523 329 178 12 6 310 152 460 2.57e-41 149
Msa0761780 MtrunA17_Chr6g0462541 31.329 316 170 11 19 310 167 459 4.05e-41 149
Msa0761780 MtrunA17_Chr7g0265151 35.439 285 158 9 55 314 200 483 4.48e-41 149
Msa0761780 MtrunA17_Chr8g0339601 33.969 262 138 8 67 302 66 318 2.73e-40 144
Msa0761780 MtrunA17_Chr8g0334851 35.314 303 153 10 28 303 172 458 4.70e-40 146
Msa0761780 MtrunA17_Chr1g0161351 33.459 266 154 5 66 315 240 498 1.09e-39 145
Msa0761780 MtrunA17_Chr1g0207971 31.274 259 161 6 66 315 204 454 1.11e-39 145
Msa0761780 MtrunA17_Chr7g0265041 30.769 312 188 8 27 314 181 488 1.51e-39 145
Msa0761780 MtrunA17_Chr4g0066151 32.292 288 167 8 55 315 194 480 2.18e-39 144
Msa0761780 MtrunA17_Chr6g0464841 31.457 302 173 8 28 311 166 451 2.69e-39 144
Msa0761780 MtrunA17_Chr8g0336691 36.330 267 138 8 67 310 1118 1375 2.72e-39 147
Msa0761780 MtrunA17_Chr8g0336691 33.708 267 145 9 67 310 212 469 1.37e-36 139
Msa0761780 MtrunA17_Chr8g0336691 33.992 253 135 9 67 310 679 908 8.10e-33 128
Msa0761780 MtrunA17_Chr5g0442601 30.746 335 185 11 13 314 555 875 3.24e-39 147
Msa0761780 MtrunA17_Chr5g0442601 37.912 182 84 7 93 254 164 336 2.61e-28 115
Msa0761780 MtrunA17_Chr8g0339461 34.191 272 144 8 58 303 198 460 3.85e-39 144
Msa0761780 MtrunA17_Chr1g0179901 32.278 316 180 9 28 314 183 493 4.57e-39 144
Msa0761780 MtrunA17_Chr3g0079731 34.164 281 140 8 66 312 209 478 5.78e-39 143
Msa0761780 MtrunA17_Chr4g0014061 32.967 273 156 7 68 316 205 474 5.87e-39 143
Msa0761780 MtrunA17_Chr7g0243771 34.831 267 150 8 71 316 214 477 6.95e-39 143
Msa0761780 MtrunA17_Chr6g0459311 31.803 305 174 9 27 310 176 467 7.20e-39 143
Msa0761780 MtrunA17_Chr7g0265141 33.692 279 157 6 59 312 208 483 7.41e-39 143
Msa0761780 MtrunA17_Chr7g0243871 33.700 273 149 9 66 316 212 474 1.23e-38 142
Msa0761780 MtrunA17_Chr6g0454231 31.600 250 131 5 66 312 4 216 1.28e-38 142
Msa0761780 MtrunA17_Chr7g0243781 32.959 267 148 8 73 316 219 477 2.13e-38 142
Msa0761780 MtrunA17_Chr6g0462521 30.868 311 174 10 19 312 162 448 2.18e-38 141
Msa0761780 MtrunA17_Chr4g0066221 33.453 278 157 8 65 315 205 481 2.53e-38 141
Msa0761780 MtrunA17_Chr2g0302991 31.353 303 184 6 28 312 164 460 2.81e-38 141
Msa0761780 MtrunA17_Chr2g0302961 32.453 265 155 5 66 312 205 463 2.93e-38 141
Msa0761780 MtrunA17_Chr6g0464861 31.879 298 177 9 28 311 165 450 4.08e-38 140
Msa0761780 MtrunA17_Chr7g0265101 33.333 279 160 10 60 314 210 486 4.91e-38 141
Msa0761780 MtrunA17_Chr7g0243931 33.955 268 155 7 71 316 225 492 5.00e-38 141
Msa0761780 MtrunA17_Chr7g0243801 34.701 268 149 9 71 316 215 478 5.30e-38 140
Msa0761780 MtrunA17_Chr8g0339441 39.320 206 103 6 124 307 217 422 6.10e-38 139
Msa0761780 MtrunA17_Chr4g0072761 31.373 306 187 9 17 316 166 454 7.17e-38 140
Msa0761780 MtrunA17_Chr4g0060511 34.201 269 153 9 71 316 222 489 7.52e-38 140
Msa0761780 MtrunA17_Chr7g0275511 35.926 270 137 12 66 310 213 471 8.49e-38 140
Msa0761780 MtrunA17_Chr6g0462551 34.615 260 143 8 68 310 211 460 8.63e-38 140
Msa0761780 MtrunA17_Chr1g0153451 34.058 276 149 9 57 310 195 459 8.69e-38 140
Msa0761780 MtrunA17_Chr5g0431361 32.143 308 181 8 21 316 164 455 1.12e-37 139
Msa0761780 MtrunA17_Chr7g0232401 32.246 276 151 7 52 303 193 456 1.22e-37 139
Msa0761780 MtrunA17_Chr4g0044521 31.183 279 167 8 55 312 190 464 1.25e-37 139
Msa0761780 MtrunA17_Chr8g0334861 31.024 332 180 13 9 311 149 460 1.25e-37 139
Msa0761780 MtrunA17_Chr8g0336261 43.382 136 76 1 147 281 1 136 1.46e-37 130
Msa0761780 MtrunA17_Chr8g0336651 34.201 269 143 8 67 310 980 1239 1.50e-37 142
Msa0761780 MtrunA17_Chr8g0336651 34.783 253 129 9 67 310 545 770 6.30e-36 137
Msa0761780 MtrunA17_Chr8g0336651 35.606 264 140 10 68 310 206 460 1.06e-34 134
Msa0761780 MtrunA17_Chr4g0042891 35.075 268 138 10 67 312 210 463 1.52e-37 139
Msa0761780 MtrunA17_Chr5g0431441 31.833 311 183 10 15 314 173 465 1.71e-37 139
Msa0761780 MtrunA17_Chr1g0207831 31.923 260 160 5 66 315 212 464 2.56e-37 139
Msa0761780 MtrunA17_Chr8g0339451 32.595 316 173 12 19 307 154 456 2.74e-37 138
Msa0761780 MtrunA17_Chr5g0419771 32.653 294 167 10 53 319 228 517 3.56e-37 139
Msa0761780 MtrunA17_Chr7g0243711 36.744 215 117 5 121 316 104 318 3.85e-37 135
Msa0761780 MtrunA17_Chr7g0218791 32.389 247 140 6 71 309 215 442 4.11e-37 137
Msa0761780 MtrunA17_Chr5g0393591 31.343 268 153 6 58 318 196 439 4.14e-37 137
Msa0761780 MtrunA17_Chr8g0347281 32.997 297 166 12 27 303 178 461 4.41e-37 138
Msa0761780 MtrunA17_Chr5g0442541 32.734 278 148 9 66 314 198 465 4.91e-37 137
Msa0761780 MtrunA17_Chr4g0044501 33.442 308 185 9 24 316 175 477 5.76e-37 138
Msa0761780 MtrunA17_Chr6g0449931 32.130 277 148 7 67 316 206 469 6.76e-37 137
Msa0761780 MtrunA17_Chr4g0042931 36.431 269 139 10 66 312 203 461 8.61e-37 137
Msa0761780 MtrunA17_Chr7g0243631 38.208 212 111 6 125 316 277 488 9.86e-37 137
Msa0761780 MtrunA17_Chr5g0442491 32.734 278 146 9 67 314 208 474 1.70e-36 136
Msa0761780 MtrunA17_Chr7g0243951 33.579 271 151 10 71 316 219 485 1.87e-36 136
Msa0761780 MtrunA17_Chr7g0265111 38.967 213 110 4 125 317 306 518 2.46e-36 137
Msa0761780 MtrunA17_Chr7g0265051 32.740 281 158 10 60 314 209 484 2.51e-36 136
Msa0761780 MtrunA17_Chr8g0361371 33.728 338 164 17 9 311 155 467 3.36e-36 135
Msa0761780 MtrunA17_Chr8g0347271 34.510 255 137 8 69 303 218 462 3.78e-36 135
Msa0761780 MtrunA17_Chr4g0066261 32.042 284 163 7 65 319 207 489 4.51e-36 135
Msa0761780 MtrunA17_Chr7g0275681 32.222 270 160 7 65 314 214 480 5.32e-36 135
Msa0761780 MtrunA17_Chr1g0159551 33.955 268 146 7 68 314 202 459 6.16e-36 134
Msa0761780 MtrunA17_Chr5g0448521 34.164 281 142 11 66 314 198 467 1.30e-35 134
Msa0761780 MtrunA17_Chr1g0173121 35.115 262 144 7 71 314 209 462 1.35e-35 134
Msa0761780 MtrunA17_Chr5g0431401 31.908 304 179 8 25 316 163 450 1.39e-35 133
Msa0761780 MtrunA17_Chr4g0072771 31.373 306 187 11 17 316 179 467 1.42e-35 134
Msa0761780 MtrunA17_Chr5g0442511 32.374 278 149 9 67 315 227 494 1.48e-35 134
Msa0761780 MtrunA17_Chr4g0066281 31.475 305 178 8 38 315 167 467 1.60e-35 134
Msa0761780 MtrunA17_Chr8g0336741 38.813 219 108 9 68 270 213 421 1.61e-35 134
Msa0761780 MtrunA17_Chr7g0243681 32.342 269 153 8 71 316 219 481 1.61e-35 134
Msa0761780 MtrunA17_Chr8g0339631 38.500 200 102 7 124 303 259 457 1.68e-35 134
Msa0761780 MtrunA17_Chr7g0235051 33.840 263 151 8 71 311 189 450 1.92e-35 133
Msa0761780 MtrunA17_Chr8g0336731 31.776 321 180 12 18 311 179 487 2.26e-35 134
Msa0761780 MtrunA17_Chr7g0232411 32.117 274 157 8 58 310 196 461 2.80e-35 133
Msa0761780 MtrunA17_Chr8g0374941 32.967 273 155 7 66 311 1143 1414 2.84e-35 135
Msa0761780 MtrunA17_Chr8g0374941 31.660 259 149 8 66 297 205 462 5.63e-30 120
Msa0761780 MtrunA17_Chr8g0374941 29.642 307 180 10 23 296 623 926 4.86e-29 117
Msa0761780 MtrunA17_Chr4g0011051 31.502 273 155 7 69 314 220 487 3.27e-35 133
Msa0761780 MtrunA17_Chr8g0382021 33.582 268 149 9 68 314 229 488 4.16e-35 133
Msa0761780 MtrunA17_Chr5g0429681 32.343 303 171 12 28 311 209 496 4.32e-35 133
Msa0761780 MtrunA17_Chr5g0432731 30.233 301 186 9 22 311 6 293 5.47e-35 129
Msa0761780 MtrunA17_Chr2g0307961 32.296 257 154 7 69 314 221 468 6.10e-35 132
Msa0761780 MtrunA17_Chr5g0419761 32.234 273 153 8 69 314 218 485 6.21e-35 132
Msa0761780 MtrunA17_Chr5g0442561 28.931 318 179 11 28 314 171 472 6.32e-35 132
Msa0761780 MtrunA17_Chr8g0374901 32.028 281 155 8 66 315 204 479 6.80e-35 132
Msa0761780 MtrunA17_Chr4g0066131 30.921 304 181 8 40 315 173 475 1.09e-34 131
Msa0761780 MtrunA17_Chr6g0463861 32.000 275 159 7 65 312 198 471 1.09e-34 131
Msa0761780 MtrunA17_Chr5g0401851 31.970 269 159 7 71 316 218 485 1.55e-34 131
Msa0761780 MtrunA17_Chr4g0066201 31.295 278 161 7 64 315 202 475 1.80e-34 131
Msa0761780 MtrunA17_Chr7g0243861 36.493 211 115 5 125 316 279 489 1.91e-34 131
Msa0761780 MtrunA17_Chr6g0463851 29.217 332 185 11 18 315 168 483 2.23e-34 130
Msa0761780 MtrunA17_Chr7g0232391 30.943 265 154 7 67 310 205 461 2.33e-34 130
Msa0761780 MtrunA17_Chr3g0106231 29.874 318 182 10 14 314 158 451 3.05e-34 130
Msa0761780 MtrunA17_Chr5g0442521 30.496 282 151 9 66 314 206 475 3.30e-34 130
Msa0761780 MtrunA17_Chr8g0334831 32.817 323 162 14 27 311 170 475 7.93e-34 129
Msa0761780 MtrunA17_Chr7g0232311 30.769 299 166 10 38 311 178 460 8.31e-34 129
Msa0761780 MtrunA17_Chr7g0232331 31.522 276 139 9 67 310 205 462 9.03e-34 129
Msa0761780 MtrunA17_Chr7g0243761 38.308 201 96 7 125 316 275 456 9.14e-34 129
Msa0761780 MtrunA17_Chr2g0294931 31.183 279 165 6 65 317 207 484 9.60e-34 129
Msa0761780 MtrunA17_Chr5g0403641 29.240 342 188 14 5 307 169 495 9.72e-34 129
Msa0761780 MtrunA17_Chr5g0431421 32.680 306 174 9 25 316 163 450 1.65e-33 128
Msa0761780 MtrunA17_Chr6g0463891 31.481 270 166 5 66 316 217 486 1.70e-33 128
Msa0761780 MtrunA17_Chr5g0431371 32.028 281 166 6 48 316 183 450 2.56e-33 127
Msa0761780 MtrunA17_Chr8g0374971 30.526 285 167 8 65 319 205 488 3.97e-33 127
Msa0761780 MtrunA17_Chr1g0165701 33.803 213 124 5 121 316 273 485 5.12e-33 127
Msa0761780 MtrunA17_Chr7g0243851 32.342 269 158 8 71 316 177 444 5.27e-33 126
Msa0761780 MtrunA17_Chr1g0153461 36.408 206 112 5 124 310 3 208 6.15e-33 121
Msa0761780 MtrunA17_Chr4g0066171 32.374 278 158 7 64 315 204 477 6.67e-33 127
Msa0761780 MtrunA17_Chr2g0294921 31.379 290 171 7 53 315 343 631 7.57e-33 128
Msa0761780 MtrunA17_Chr7g0232341 30.325 277 159 8 58 310 196 462 9.07e-33 126
Msa0761780 MtrunA17_Chr4g0044481 34.034 238 150 6 24 258 166 399 1.12e-32 125
Msa0761780 MtrunA17_Chr8g0355221 33.953 215 123 5 121 316 274 488 1.14e-32 126
Msa0761780 MtrunA17_Chr8g0374931 29.276 304 187 7 39 315 180 482 2.51e-32 125
Msa0761780 MtrunA17_Chr3g0106251 28.990 307 189 8 19 314 5 293 6.94e-32 121
Msa0761780 MtrunA17_Chr6g0482061 28.912 294 178 9 28 302 186 467 8.73e-32 124
Msa0761780 MtrunA17_Chr7g0218311 30.000 290 174 7 53 315 197 484 1.13e-31 123
Msa0761780 MtrunA17_Chr5g0428081 31.047 277 164 6 65 315 205 480 1.26e-31 123
Msa0761780 MtrunA17_Chr6g0453981 37.725 167 100 3 10 175 45 208 1.32e-31 118
Msa0761780 MtrunA17_Chr2g0294941 33.202 253 146 7 39 269 70 321 1.74e-31 121
Msa0761780 MtrunA17_Chr5g0440421 32.117 274 161 9 64 314 222 493 6.12e-31 121
Msa0761780 MtrunA17_Chr8g0370941 29.966 297 147 12 66 314 205 488 9.08e-31 121
Msa0761780 MtrunA17_Chr5g0431431 33.061 245 129 8 17 251 105 324 1.45e-30 118
Msa0761780 MtrunA17_Chr8g0350881 30.824 279 165 7 66 317 206 483 1.74e-30 120
Msa0761780 MtrunA17_Chr5g0420801 31.154 260 155 9 69 315 211 459 3.67e-30 119
Msa0761780 MtrunA17_Chr8g0369341 28.213 319 189 13 19 315 169 469 5.14e-30 119
Msa0761780 MtrunA17_Chr5g0416741 29.811 265 167 6 71 316 221 485 5.29e-30 119
Msa0761780 MtrunA17_Chr5g0448551 30.556 252 163 6 25 274 168 409 5.50e-30 118
Msa0761780 MtrunA17_Chr7g0243611 32.328 232 146 7 40 264 52 279 1.84e-29 114
Msa0761780 MtrunA17_Chr5g0410941 28.912 294 173 8 53 315 202 490 3.25e-29 116
Msa0761780 MtrunA17_Chr7g0243911 37.500 176 96 5 118 285 15 184 9.41e-29 110
Msa0761780 MtrunA17_Chr6g0453941 38.854 157 93 3 21 175 106 261 4.11e-27 107
Msa0761780 MtrunA17_Chr2g0329111 30.204 245 141 9 68 295 216 447 4.30e-27 110
Msa0761780 MtrunA17_Chr5g0409591 29.699 266 142 9 69 291 212 475 7.46e-27 110
Msa0761780 MtrunA17_Chr8g0357361 42.754 138 77 2 124 260 117 253 8.65e-27 106
Msa0761780 MtrunA17_Chr7g0243811 40.288 139 79 3 120 254 235 373 9.66e-27 108
Msa0761780 MtrunA17_Chr5g0416821 28.464 267 178 8 60 316 212 475 1.03e-25 106
Msa0761780 MtrunA17_Chr7g0241781 36.471 170 98 5 123 288 239 402 4.49e-25 104
Msa0761780 MtrunA17_Chr3g0079711 34.783 184 98 6 151 312 3 186 7.01e-25 99.4
Msa0761780 MtrunA17_Chr8g0361411 29.231 260 158 9 69 312 202 451 2.32e-24 102
Msa0761780 MtrunA17_Chr7g0232351 35.519 183 93 6 67 233 205 378 4.35e-24 100
Msa0761780 MtrunA17_Chr7g0241801 32.973 185 99 5 123 306 239 399 3.28e-23 99.4
Msa0761780 MtrunA17_Chr4g0066141 37.975 158 81 4 176 316 196 353 3.42e-23 98.2
Msa0761780 MtrunA17_Chr7g0231631 29.921 254 167 7 71 316 11 261 5.99e-23 96.3
Msa0761780 MtrunA17_Chr8g0337381 39.370 127 72 2 194 316 2 127 1.07e-22 91.7
Msa0761780 MtrunA17_Chr8g0367221 40.625 128 72 2 127 250 271 398 1.42e-22 98.6
Msa0761780 MtrunA17_Chr8g0367221 34.286 175 106 5 127 292 1548 1722 2.01e-22 98.2
Msa0761780 MtrunA17_Chr8g0367221 40.625 128 72 2 127 250 1058 1185 1.30e-21 95.9
Msa0761780 MtrunA17_Chr6g0454111 33.333 141 92 2 28 167 44 183 3.22e-22 92.0
Msa0761780 MtrunA17_Chr8g0336321 39.200 125 73 2 127 248 271 395 5.54e-22 95.9
Msa0761780 MtrunA17_Chr5g0427571 38.400 125 74 2 127 248 105 229 1.19e-21 93.2
Msa0761780 MtrunA17_Chr8g0336251 36.800 125 76 2 127 248 271 395 3.18e-21 93.6
Msa0761780 MtrunA17_Chr3g0092031 36.508 126 78 2 126 250 5 129 3.64e-20 87.0
Msa0761780 MtrunA17_Chr1g0207881 32.026 153 97 2 170 315 233 385 9.28e-20 89.0
Msa0761780 MtrunA17_Chr8g0334841 34.161 161 89 5 28 184 1 148 8.64e-19 82.4
Msa0761780 MtrunA17_Chr6g0466831 31.250 176 112 5 126 294 271 444 1.22e-18 86.3
Msa0761780 MtrunA17_Chr4g0069611 30.000 190 118 6 67 250 212 392 2.38e-18 85.5
Msa0761780 MtrunA17_Chr2g0278721 32.000 175 104 6 126 290 784 953 3.83e-18 85.5
Msa0761780 MtrunA17_Chr2g0278721 36.800 125 77 2 127 250 274 397 7.59e-17 81.3
Msa0761780 MtrunA17_Chr6g0464091 31.868 182 117 4 71 250 226 402 9.09e-18 83.6
Msa0761780 MtrunA17_Chr4g0029131 31.884 138 88 3 127 258 257 394 3.04e-17 82.4
Msa0761780 MtrunA17_Chr2g0278741 36.800 125 77 2 127 250 356 479 5.31e-17 81.6
Msa0761780 MtrunA17_Chr4g0040691 29.258 229 141 8 66 285 209 425 6.10e-17 81.3
Msa0761780 MtrunA17_Chr4g0039881 28.182 220 143 6 34 250 162 369 7.33e-17 80.9
Msa0761780 MtrunA17_Chr6g0466841 29.545 176 115 5 126 294 271 444 8.30e-17 80.9
Msa0761780 MtrunA17_Chr1g0196851 29.050 179 115 5 121 288 292 469 8.72e-17 80.9
Msa0761780 MtrunA17_Chr2g0302851 34.921 126 80 2 126 250 269 393 9.49e-17 80.5
Msa0761780 MtrunA17_Chr2g0283041 30.303 165 105 4 125 280 256 419 1.16e-16 80.5
Msa0761780 MtrunA17_Chr4g0029151 32.374 139 88 3 127 259 265 403 5.35e-16 78.2
Msa0761780 MtrunA17_Chr4g0040711 28.384 229 143 8 66 285 209 425 1.21e-15 77.4
Msa0761780 MtrunA17_Chr7g0250021 31.013 158 104 3 35 190 173 327 2.90e-14 72.4
Msa0761780 MtrunA17_Chr6g0454391 44.444 63 35 0 210 272 13 75 4.07e-14 68.2
Msa0761780 MtrunA17_Chr6g0469961 32.026 153 83 7 24 167 24 164 8.42e-13 65.5
Msa0761780 MtrunA17_Chr2g0319801 31.034 145 94 4 120 259 252 395 6.01e-12 66.2
Msa0761780 MtrunA17_Chr5g0427561 32.143 84 56 1 232 314 1 84 7.71e-12 60.8
Msa0761780 MtrunA17_Chr7g0243731 40.000 70 42 0 189 258 4 73 4.22e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761780 AT1G22400.1 38.176 296 176 5 22 311 184 478 1.49e-68 222
Msa0761780 AT1G22380.1 38.667 300 177 5 21 314 182 480 4.71e-68 221
Msa0761780 AT1G78270.1 39.103 312 176 8 19 317 179 489 8.21e-65 212
Msa0761780 AT1G22360.1 37.829 304 174 6 21 314 179 477 1.69e-64 211
Msa0761780 AT3G11340.1 39.931 288 157 6 35 316 169 446 3.98e-64 209
Msa0761780 AT1G22340.1 37.417 302 179 6 21 314 182 481 1.09e-63 209
Msa0761780 AT1G22360.2 36.755 302 168 6 21 314 179 465 4.48e-62 204
Msa0761780 AT1G22370.1 38.158 304 179 7 18 314 4 305 1.10e-61 199
Msa0761780 AT5G05890.1 42.379 269 138 7 54 316 197 454 1.22e-61 203
Msa0761780 AT5G05880.1 39.542 306 163 8 18 316 160 450 3.10e-61 202
Msa0761780 AT5G05900.1 45.382 249 119 7 70 314 212 447 3.55e-61 201
Msa0761780 AT1G22370.2 38.158 304 179 7 18 314 174 475 1.18e-59 198
Msa0761780 AT5G05860.1 40.418 287 153 7 35 314 172 447 5.57e-57 191
Msa0761780 AT3G46670.1 37.847 288 161 6 35 316 175 450 1.64e-56 189
Msa0761780 AT3G55710.1 37.500 304 170 9 21 316 165 456 7.05e-56 188
Msa0761780 AT5G05870.1 36.601 306 171 9 18 314 163 454 1.88e-55 187
Msa0761780 AT3G46660.1 36.806 288 165 6 35 316 181 457 2.13e-54 184
Msa0761780 AT3G46700.1 37.241 290 161 7 35 316 170 446 3.92e-54 183
Msa0761780 AT5G59580.1 35.216 301 166 9 26 315 166 448 4.10e-54 183
Msa0761780 AT3G55700.1 36.601 306 170 8 18 316 164 452 4.91e-54 183
Msa0761780 AT3G46680.1 36.014 286 159 7 35 311 176 446 5.17e-54 183
Msa0761780 AT5G38010.1 36.491 285 165 6 35 314 180 453 2.74e-53 181
Msa0761780 AT5G38040.1 34.641 306 173 8 15 312 161 447 3.80e-53 181
Msa0761780 AT5G59590.1 35.452 299 174 7 19 311 161 446 8.83e-53 179
Msa0761780 AT4G15480.1 36.434 258 149 4 66 312 223 476 9.05e-51 175
Msa0761780 AT3G46690.1 37.113 291 160 7 35 316 175 451 7.74e-50 172
Msa0761780 AT3G46720.1 36.458 288 158 8 35 316 174 442 1.98e-49 171
Msa0761780 AT5G17040.2 32.013 303 186 8 18 314 49 337 1.67e-48 166
Msa0761780 AT2G26480.1 33.333 288 173 7 35 314 169 445 2.32e-48 168
Msa0761780 AT3G46650.1 33.887 301 173 7 22 314 150 432 5.64e-48 167
Msa0761780 AT5G17050.1 32.248 307 189 8 12 314 165 456 1.35e-46 164
Msa0761780 AT2G43840.2 32.890 301 183 8 25 315 156 447 1.93e-46 163
Msa0761780 AT5G17040.1 32.423 293 178 8 28 314 161 439 1.97e-46 162
Msa0761780 AT2G43840.1 33.553 304 177 10 25 315 156 447 2.81e-46 162
Msa0761780 AT1G05675.1 36.014 286 171 6 34 311 168 449 3.33e-45 160
Msa0761780 AT3G21560.1 35.531 273 154 8 52 312 208 470 8.26e-45 159
Msa0761780 AT2G43820.1 32.881 295 179 8 34 316 161 448 9.85e-45 158
Msa0761780 AT5G26310.1 36.101 277 126 12 66 307 200 460 1.23e-43 156
Msa0761780 AT4G15500.1 32.558 301 182 5 24 311 167 459 1.35e-43 156
Msa0761780 AT1G05680.1 34.354 294 165 6 34 311 168 449 2.25e-43 155
Msa0761780 AT2G28080.1 30.450 289 188 6 16 298 177 458 2.59e-43 155
Msa0761780 AT3G16520.3 33.550 307 176 11 19 312 166 457 5.17e-43 154
Msa0761780 AT3G53160.1 33.681 288 135 8 69 318 217 486 7.75e-43 154
Msa0761780 AT5G17030.1 30.769 299 189 7 21 314 170 455 8.00e-43 153
Msa0761780 AT4G15490.1 34.432 273 156 7 52 311 201 463 9.06e-43 154
Msa0761780 AT2G15490.3 36.680 259 146 8 69 312 220 475 9.36e-43 154
Msa0761780 AT2G23250.1 35.254 295 169 10 34 317 155 438 1.85e-42 152
Msa0761780 AT2G23260.1 33.904 292 176 9 34 314 168 453 2.55e-42 152
Msa0761780 AT1G30530.1 32.226 301 186 8 18 314 164 450 2.69e-42 152
Msa0761780 AT2G15480.1 34.615 260 150 6 69 312 223 478 2.75e-42 152
Msa0761780 AT2G15490.1 36.260 262 146 8 69 312 220 478 2.93e-42 152
Msa0761780 AT2G31750.1 31.724 290 184 7 35 314 169 454 5.97e-42 151
Msa0761780 AT2G31750.2 31.724 290 184 7 35 314 169 454 1.30e-41 150
Msa0761780 AT2G15480.2 33.704 270 149 6 69 312 223 488 1.58e-41 150
Msa0761780 AT2G36970.1 31.457 302 188 7 24 316 181 472 1.74e-41 150
Msa0761780 AT4G15550.1 30.667 300 168 8 34 311 189 470 6.70e-41 149
Msa0761780 AT3G16520.2 35.185 270 149 10 19 275 166 422 1.15e-40 147
Msa0761780 AT3G16520.1 35.185 270 149 10 19 275 166 422 1.27e-40 147
Msa0761780 AT3G02100.1 34.661 251 143 7 70 316 228 461 1.99e-40 147
Msa0761780 AT2G29710.1 29.245 318 199 7 16 317 158 465 4.04e-40 146
Msa0761780 AT2G36760.1 34.420 276 153 8 69 318 223 496 1.32e-39 145
Msa0761780 AT1G05530.1 31.190 311 176 9 27 314 159 454 1.46e-39 145
Msa0761780 AT1G05560.1 33.003 303 166 9 35 314 163 451 2.20e-39 144
Msa0761780 AT2G31790.1 27.922 308 206 8 18 314 154 456 2.82e-39 144
Msa0761780 AT1G01420.1 36.614 254 126 10 66 297 206 446 3.39e-39 144
Msa0761780 AT1G01420.2 36.614 254 126 10 66 297 209 449 3.61e-39 144
Msa0761780 AT1G05560.2 33.003 303 166 9 35 314 213 501 4.20e-39 144
Msa0761780 AT5G66690.1 34.944 269 130 10 66 303 200 454 5.32e-39 144
Msa0761780 AT4G34131.1 32.482 274 168 8 57 316 211 481 6.40e-39 143
Msa0761780 AT2G36780.1 33.209 268 155 7 69 314 223 488 7.79e-39 143
Msa0761780 AT4G34138.1 34.884 258 150 7 69 312 223 476 1.57e-38 142
Msa0761780 AT3G50740.1 34.074 270 127 10 68 302 207 460 2.21e-38 142
Msa0761780 AT4G01070.1 33.712 264 144 8 66 307 206 460 2.89e-38 142
Msa0761780 AT2G36770.1 32.727 275 155 9 69 316 223 494 2.38e-37 139
Msa0761780 AT2G36750.1 32.714 269 155 9 69 314 218 483 7.11e-37 138
Msa0761780 AT2G29730.1 28.125 320 197 9 19 319 162 467 9.92e-37 137
Msa0761780 AT2G36800.1 32.281 285 164 9 53 314 209 487 1.45e-36 137
Msa0761780 AT1G01390.1 40.394 203 93 7 66 250 206 398 1.46e-36 137
Msa0761780 AT1G01390.2 40.394 203 93 7 66 250 223 415 1.87e-36 137
Msa0761780 AT1G07250.1 32.075 318 174 14 4 303 168 461 2.10e-36 136
Msa0761780 AT1G24100.1 32.131 305 181 10 25 314 165 458 3.19e-36 135
Msa0761780 AT4G34135.1 33.824 272 164 6 59 316 214 483 3.54e-36 136
Msa0761780 AT2G30140.1 29.787 329 198 11 1 318 149 455 5.88e-36 135
Msa0761780 AT4G14090.1 33.333 252 146 7 70 311 213 452 8.35e-36 134
Msa0761780 AT2G30140.2 30.091 329 196 11 1 318 149 454 1.31e-35 134
Msa0761780 AT4G15260.1 31.618 272 151 7 66 312 91 352 1.35e-35 132
Msa0761780 AT3G21780.1 30.882 272 154 8 66 312 204 466 8.35e-35 132
Msa0761780 AT5G03490.1 31.757 296 164 11 39 312 181 460 5.15e-34 130
Msa0761780 AT2G36790.1 32.857 280 140 9 69 314 222 487 1.23e-33 129
Msa0761780 AT1G07240.1 29.938 324 191 12 8 314 171 475 1.25e-33 129
Msa0761780 AT4G36770.1 35.426 223 109 8 72 275 217 423 1.31e-33 129
Msa0761780 AT3G21800.1 33.083 266 150 9 9 259 154 406 3.35e-33 128
Msa0761780 AT4G15280.1 30.403 273 154 7 66 312 209 471 3.85e-33 127
Msa0761780 AT1G10400.1 33.333 279 157 11 45 311 198 459 3.94e-33 127
Msa0761780 AT2G18570.1 32.714 269 137 9 68 307 206 459 4.47e-33 127
Msa0761780 AT4G15280.2 30.403 273 154 7 66 312 241 503 5.66e-33 127
Msa0761780 AT2G29740.1 28.618 304 180 9 27 311 186 471 5.73e-33 127
Msa0761780 AT1G07260.1 34.335 233 133 7 91 311 244 468 3.43e-32 125
Msa0761780 AT3G21790.1 27.619 315 191 8 25 314 176 478 5.70e-32 124
Msa0761780 AT1G73880.1 28.794 257 167 6 69 316 219 468 1.86e-31 123
Msa0761780 AT3G21760.1 29.814 322 184 8 19 312 171 478 2.21e-31 123
Msa0761780 AT2G30150.1 28.296 311 192 10 15 314 146 436 1.24e-30 120
Msa0761780 AT5G37950.2 34.483 203 118 5 35 233 146 337 1.36e-30 118
Msa0761780 AT5G37950.1 34.483 203 118 5 35 233 152 343 1.50e-30 118
Msa0761780 AT2G30150.2 28.296 311 192 10 15 314 162 452 1.50e-30 120
Msa0761780 AT5G14860.1 33.588 262 146 11 66 312 225 473 2.01e-30 120
Msa0761780 AT2G18560.1 31.835 267 142 9 68 307 116 369 2.06e-30 119
Msa0761780 AT2G29750.1 27.852 298 187 8 28 311 187 470 2.21e-30 120
Msa0761780 AT3G53150.1 30.576 278 158 9 69 312 231 507 9.77e-30 119
Msa0761780 AT3G22250.1 33.166 199 119 6 89 279 240 432 1.13e-28 115
Msa0761780 AT2G16890.2 28.873 284 174 10 44 312 195 465 2.56e-28 114
Msa0761780 AT3G21750.1 30.000 280 157 7 69 319 204 473 3.13e-28 114
Msa0761780 AT5G12890.1 37.895 190 97 8 68 245 224 404 8.18e-28 113
Msa0761780 AT1G51210.1 31.278 227 137 5 71 290 219 433 2.55e-27 111
Msa0761780 AT2G16890.3 31.963 219 130 7 44 256 195 400 3.89e-26 107
Msa0761780 AT1G06000.1 31.298 262 153 10 69 311 177 430 1.15e-25 106
Msa0761780 AT5G65550.1 38.346 133 79 3 127 258 270 400 3.63e-21 94.0
Msa0761780 AT5G49690.1 39.837 123 68 2 127 248 267 384 3.07e-20 91.3
Msa0761780 AT2G22590.1 39.844 128 73 2 127 250 274 401 7.18e-19 87.4
Msa0761780 AT5G53990.1 31.884 138 87 3 127 259 244 379 4.48e-15 75.9
Msa0761780 AT1G64910.1 30.147 136 92 3 127 259 244 379 2.80e-14 73.6
Msa0761780 AT4G01070.2 37.615 109 56 2 66 171 206 305 1.11e-13 71.2
Msa0761780 AT4G27570.1 29.197 137 90 3 127 258 250 384 7.55e-13 69.3
Msa0761780 AT5G54010.1 30.435 138 89 4 127 259 250 385 9.41e-13 68.9
Msa0761780 AT4G27560.1 29.197 137 90 3 127 258 250 384 2.54e-12 67.8
Msa0761780 AT4G09500.2 30.657 137 88 4 127 258 244 378 3.44e-12 67.4
Msa0761780 AT4G09500.1 30.657 137 88 4 127 258 219 353 3.93e-12 67.0
Msa0761780 AT2G22930.1 27.206 136 94 3 127 258 244 378 1.42e-11 65.5
Msa0761780 AT3G29630.1 30.435 138 89 3 127 259 246 381 3.50e-11 64.3
Msa0761780 AT3G29630.2 30.435 138 89 3 127 259 220 355 4.52e-11 63.9

Find 73 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATACTGAATCAAATTT+TGG 0.160775 5_2:-19357631 None:intergenic
TGGGGACTTGAAGACGAATT+TGG 0.196816 5_2:-19356962 None:intergenic
TGCTATTGAAATGGCGGATT+TGG 0.219461 5_2:+19357565 Msa0761780:CDS
ATTTGTTGATCAGCAAAATA+AGG 0.280250 5_2:-19357416 None:intergenic
GTGAGTGAGGTTTGGAAACT+TGG 0.292117 5_2:+19357452 Msa0761780:CDS
GACGAATTTGGGAGAGAATT+GGG 0.312540 5_2:-19356950 None:intergenic
CCAAACATGGTACAAGAAAA+AGG 0.313624 5_2:+19357224 Msa0761780:CDS
AAAATTTGATTCAGTATATA+AGG 0.317414 5_2:+19357633 Msa0761780:CDS
GAGAAGAAATACTTGAGATT+TGG 0.328817 5_2:+19357156 Msa0761780:CDS
AGACGAATTTGGGAGAGAAT+TGG 0.347001 5_2:-19356951 None:intergenic
GGGGACTTGAAGACGAATTT+GGG 0.347598 5_2:-19356961 None:intergenic
TAGGAATGTTGTTGAGAAAA+TGG 0.351075 5_2:+19357499 Msa0761780:CDS
CTGATCAACAAATTAATAGT+AGG 0.360356 5_2:+19357426 Msa0761780:CDS
CCACCCACTATGTGTCAAAA+AGG 0.361214 5_2:-19357345 None:intergenic
TGGTATTGAGGTGGTGGTGA+AGG 0.367888 5_2:-19357004 None:intergenic
ATATGAAGGATGTTTGTAAT+AGG 0.368608 5_2:+19357480 Msa0761780:CDS
GGGCCAATAGTGTAGAGTTT+GGG 0.371521 5_2:-19356981 None:intergenic
AAACTTTATCTAAAACGATA+TGG 0.371646 5_2:-19356860 None:intergenic
CTTTGGAGAGTGTGGTTTGT+GGG 0.379040 5_2:+19357375 Msa0761780:CDS
TTCAAGATCTGCTATTGAAA+TGG 0.395191 5_2:+19357556 Msa0761780:CDS
GGTATTGAGGTGGTGGTGAA+GGG 0.403113 5_2:-19357003 None:intergenic
GTCCCCAAACTCTACACTAT+TGG 0.413746 5_2:+19356978 Msa0761780:CDS
GGGGCCAATAGTGTAGAGTT+TGG 0.424125 5_2:-19356982 None:intergenic
GTAGGTTTGTGAGTGAGGTT+TGG 0.428038 5_2:+19357444 Msa0761780:CDS
GAAAGGGATGATTGTGGGGT+GGG 0.434677 5_2:+19357283 Msa0761780:CDS
TCAGTTGTATATGTCAGCTT+TGG 0.454013 5_2:+19357113 Msa0761780:CDS
AAATAAGGCCAACATATCAT+AGG 0.459700 5_2:-19357401 None:intergenic
TTGTTGTAGGAGGAACCATT+AGG 0.462958 5_2:-19357605 None:intergenic
TCCAAGAGTGTAAGTCCTAA+TGG 0.463911 5_2:+19357590 Msa0761780:CDS
CATTGACTTTAAGCGATGGT+TGG 0.467666 5_2:-19356893 None:intergenic
AAAGAGAAAGGGATGATTGT+GGG 0.472351 5_2:+19357278 Msa0761780:CDS
AACAAATATGGGTTCGAAGA+TGG 0.472593 5_2:+19355550 None:intergenic
TAATAGTAGGTTTGTGAGTG+AGG 0.474155 5_2:+19357439 Msa0761780:CDS
ATTGACTTTAAGCGATGGTT+GGG 0.479707 5_2:-19356892 None:intergenic
GAAACTTGGGTTGGATATGA+AGG 0.480309 5_2:+19357466 Msa0761780:CDS
ACTTTGGAGAGTGTGGTTTG+TGG 0.480967 5_2:+19357374 Msa0761780:CDS
ACCATTAGGACTTACACTCT+TGG 0.484150 5_2:-19357591 None:intergenic
GTGGGGTGCCTATGATATGT+TGG 0.496505 5_2:+19357393 Msa0761780:CDS
CAACTGCAATTTCTTCAAAG+TGG 0.498490 5_2:+19357049 Msa0761780:CDS
GAAGGGACTACTAAAGAGAA+AGG 0.498754 5_2:+19357266 Msa0761780:CDS
TGAGTGAGGTTTGGAAACTT+GGG 0.500077 5_2:+19357453 Msa0761780:CDS
CGAAGTATGTTCTCCATGCC+AGG 0.505025 5_2:-19356795 None:intergenic
CATAAGAAACGTGCCTGGCA+TGG 0.526363 5_2:+19356782 Msa0761780:CDS
TGAGGTTTGGAAACTTGGGT+TGG 0.537607 5_2:+19357457 Msa0761780:CDS
GAAATACTTGAGATTTGGCA+TGG 0.537768 5_2:+19357161 Msa0761780:CDS
AGAATCGAGCCATGTCATGC+AGG 0.539051 5_2:-19357078 None:intergenic
ACGAATTTGGGAGAGAATTG+GGG 0.540729 5_2:-19356949 None:intergenic
TGTAGAGATCTACCACGTTT+CGG 0.543625 5_2:+19356819 Msa0761780:CDS
TAGTGGGTGGAACTCTACTT+TGG 0.543912 5_2:+19357358 Msa0761780:CDS
GAACTCTACTTTGGAGAGTG+TGG 0.546332 5_2:+19357367 Msa0761780:CDS
GTATTGAGGTGGTGGTGAAG+GGG 0.546856 5_2:-19357002 None:intergenic
TGATATTATGATGAACAAGA+AGG 0.557986 5_2:+19357526 Msa0761780:CDS
CTATTGAAGGAGCTTGAGGA+AGG 0.558458 5_2:+19357248 Msa0761780:CDS
TGTGGGGTGGGTTTCACAAG+AGG 0.561937 5_2:+19357295 Msa0761780:CDS
CGCATCATAAGAAACGTGCC+TGG 0.563463 5_2:+19356777 Msa0761780:CDS
AAGATCTGCTATTGAAATGG+CGG 0.566824 5_2:+19357559 Msa0761780:CDS
TAAAGAGAAAGGGATGATTG+TGG 0.571564 5_2:+19357277 Msa0761780:CDS
AGGACTATTGAAGGAGCTTG+AGG 0.572112 5_2:+19357244 Msa0761780:CDS
AGAAAGGGATGATTGTGGGG+TGG 0.586735 5_2:+19357282 Msa0761780:CDS
GTGGGTGATTAGGCCAAACA+TGG 0.589150 5_2:+19357211 Msa0761780:CDS
TGGATAAAACCTGCATGACA+TGG 0.590971 5_2:+19357069 Msa0761780:CDS
AAGGGACTACTAAAGAGAAA+GGG 0.595105 5_2:+19357267 Msa0761780:CDS
TTTGGAGAGTGTGGTTTGTG+GGG 0.597067 5_2:+19357376 Msa0761780:CDS
AAGAGAAAGGGATGATTGTG+GGG 0.603887 5_2:+19357279 Msa0761780:CDS
TATTGAGGTGGTGGTGAAGG+GGG 0.607014 5_2:-19357001 None:intergenic
GGCCAATAGTGTAGAGTTTG+GGG 0.607205 5_2:-19356980 None:intergenic
ATTTATAGGAGACAAGGACA+TGG 0.607396 5_2:+19356752 Msa0761780:intron
TATTGAAGGAGCTTGAGGAA+GGG 0.618899 5_2:+19357249 Msa0761780:CDS
TGTTTAATTTATAGGAGACA+AGG 0.619236 5_2:+19356746 Msa0761780:intron
AATGCATTGACTTTAAGCGA+TGG 0.630231 5_2:-19356897 None:intergenic
TATTATGATGAACAAGAAGG+AGG 0.632410 5_2:+19357529 Msa0761780:CDS
TTGTTTGTTGTACCGAAACG+TGG 0.638132 5_2:-19356831 None:intergenic
TTTCGGTACAACAAACAAAG+AGG 0.658970 5_2:+19356836 Msa0761780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTAAATCAAGAAATTA+GGG - chr5_2:19356241-19356260 None:intergenic 10.0%
!! AATAATTAAATCAAGAAATT+AGG - chr5_2:19356242-19356261 None:intergenic 10.0%
!! ATTAAGTAAAAAAAAAAGAT+AGG - chr5_2:19356614-19356633 None:intergenic 10.0%
!! ATAATTAAATCAAGAAATTA+GGG - chr5_2:19356241-19356260 None:intergenic 10.0%
!! AATAATTAAATCAAGAAATT+AGG - chr5_2:19356242-19356261 None:intergenic 10.0%
!! ATTAAGTAAAAAAAAAAGAT+AGG - chr5_2:19356614-19356633 None:intergenic 10.0%
!!! ATTTCTAGATTTAGTATAAA+TGG + chr5_2:19355710-19355729 Msa0761780:intron 15.0%
!! TATATTTGTAAAAGACATTT+AGG - chr5_2:19356136-19356155 None:intergenic 15.0%
!! TAATTAAATCAAGAAATTAG+GGG - chr5_2:19356240-19356259 None:intergenic 15.0%
!! AGATAAGTTTAAATAAAATG+AGG - chr5_2:19356388-19356407 None:intergenic 15.0%
!!! TTATATACTGAATCAAATTT+TGG - chr5_2:19357634-19357653 None:intergenic 15.0%
!! AAAATTTGATTCAGTATATA+AGG + chr5_2:19357633-19357652 Msa0761780:CDS 15.0%
!!! ATTTCTAGATTTAGTATAAA+TGG + chr5_2:19355710-19355729 Msa0761780:intron 15.0%
!! TATATTTGTAAAAGACATTT+AGG - chr5_2:19356136-19356155 None:intergenic 15.0%
!! TAATTAAATCAAGAAATTAG+GGG - chr5_2:19356240-19356259 None:intergenic 15.0%
!! AGATAAGTTTAAATAAAATG+AGG - chr5_2:19356388-19356407 None:intergenic 15.0%
!!! TTATATACTGAATCAAATTT+TGG - chr5_2:19357634-19357653 None:intergenic 15.0%
!! AAAATTTGATTCAGTATATA+AGG + chr5_2:19357633-19357652 Msa0761780:CDS 15.0%
!!! TATAAATGGTAGTTTTTCAT+AGG + chr5_2:19355724-19355743 Msa0761780:intron 20.0%
!!! TGCATTGATTAAATAAAAGT+TGG - chr5_2:19355846-19355865 None:intergenic 20.0%
!! AAGAACACTTAAAGAAAAAA+GGG - chr5_2:19355874-19355893 None:intergenic 20.0%
!!! CTTTTACAAATATAAACGAA+AGG + chr5_2:19356142-19356161 Msa0761780:intron 20.0%
!! TTATTGGATAAAACTTATGT+GGG - chr5_2:19356532-19356551 None:intergenic 20.0%
!! TTTATTGGATAAAACTTATG+TGG - chr5_2:19356533-19356552 None:intergenic 20.0%
!!! TCAAACACATATTCTTTTAT+TGG - chr5_2:19356548-19356567 None:intergenic 20.0%
!!! TAGTAGATAAGTTTTTTTGA+AGG - chr5_2:19356656-19356675 None:intergenic 20.0%
!!! AAACTTTATCTAAAACGATA+TGG - chr5_2:19356863-19356882 None:intergenic 20.0%
!!! TTGTTTTTTTTATGGTATTG+AGG - chr5_2:19357019-19357038 None:intergenic 20.0%
!!! AGATGATGTTGTTTTTTTTA+TGG - chr5_2:19357027-19357046 None:intergenic 20.0%
!!! TATAAATGGTAGTTTTTCAT+AGG + chr5_2:19355724-19355743 Msa0761780:intron 20.0%
!!! TGCATTGATTAAATAAAAGT+TGG - chr5_2:19355846-19355865 None:intergenic 20.0%
!! AAGAACACTTAAAGAAAAAA+GGG - chr5_2:19355874-19355893 None:intergenic 20.0%
!!! CTTTTACAAATATAAACGAA+AGG + chr5_2:19356142-19356161 Msa0761780:intron 20.0%
!! TTATTGGATAAAACTTATGT+GGG - chr5_2:19356532-19356551 None:intergenic 20.0%
!! TTTATTGGATAAAACTTATG+TGG - chr5_2:19356533-19356552 None:intergenic 20.0%
!!! TCAAACACATATTCTTTTAT+TGG - chr5_2:19356548-19356567 None:intergenic 20.0%
!!! TAGTAGATAAGTTTTTTTGA+AGG - chr5_2:19356656-19356675 None:intergenic 20.0%
!!! AAACTTTATCTAAAACGATA+TGG - chr5_2:19356863-19356882 None:intergenic 20.0%
!!! TTGTTTTTTTTATGGTATTG+AGG - chr5_2:19357019-19357038 None:intergenic 20.0%
!!! AGATGATGTTGTTTTTTTTA+TGG - chr5_2:19357027-19357046 None:intergenic 20.0%
!! TAGTTTTTCATAGGAAAAAC+AGG + chr5_2:19355733-19355752 Msa0761780:intron 25.0%
! CAAGAACACTTAAAGAAAAA+AGG - chr5_2:19355875-19355894 None:intergenic 25.0%
!! TGTTAGAAATTCTGTGTTTT+TGG - chr5_2:19355977-19355996 None:intergenic 25.0%
! ATTATACATATGCAAATGCA+AGG + chr5_2:19356259-19356278 Msa0761780:intron 25.0%
!!! TATCTTTGATTTTACGAGAA+AGG + chr5_2:19356403-19356422 Msa0761780:intron 25.0%
! TTTAATACTCACTCTCTTAT+CGG + chr5_2:19356453-19356472 Msa0761780:intron 25.0%
! TAAAAGAATATGTGTTTGAG+AGG + chr5_2:19356549-19356568 Msa0761780:intron 25.0%
! AAAAGAATATGTGTTTGAGA+GGG + chr5_2:19356550-19356569 Msa0761780:intron 25.0%
!! GTTCTCGTTGTTTAATTTAT+AGG + chr5_2:19356738-19356757 Msa0761780:intron 25.0%
!! TGTTTAATTTATAGGAGACA+AGG + chr5_2:19356746-19356765 Msa0761780:intron 25.0%
!!! TTTTTTTTATGGTATTGAGG+TGG - chr5_2:19357016-19357035 None:intergenic 25.0%
!!! ACATATACAACTGATTTTGA+TGG - chr5_2:19357107-19357126 None:intergenic 25.0%
!! ATAGCAAAAAACGATTTTTG+TGG + chr5_2:19357192-19357211 Msa0761780:CDS 25.0%
!! TAGCAAAAAACGATTTTTGT+GGG + chr5_2:19357193-19357212 Msa0761780:CDS 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG - chr5_2:19357419-19357438 None:intergenic 25.0%
! CTGATCAACAAATTAATAGT+AGG + chr5_2:19357426-19357445 Msa0761780:CDS 25.0%
! ATATGAAGGATGTTTGTAAT+AGG + chr5_2:19357480-19357499 Msa0761780:CDS 25.0%
! TGATATTATGATGAACAAGA+AGG + chr5_2:19357526-19357545 Msa0761780:CDS 25.0%
!! TATACTGAATCAAATTTTGG+AGG - chr5_2:19357631-19357650 None:intergenic 25.0%
!! TAGTTTTTCATAGGAAAAAC+AGG + chr5_2:19355733-19355752 Msa0761780:intron 25.0%
! CAAGAACACTTAAAGAAAAA+AGG - chr5_2:19355875-19355894 None:intergenic 25.0%
!! TGTTAGAAATTCTGTGTTTT+TGG - chr5_2:19355977-19355996 None:intergenic 25.0%
! ATTATACATATGCAAATGCA+AGG + chr5_2:19356259-19356278 Msa0761780:intron 25.0%
!!! TATCTTTGATTTTACGAGAA+AGG + chr5_2:19356403-19356422 Msa0761780:intron 25.0%
! TTTAATACTCACTCTCTTAT+CGG + chr5_2:19356453-19356472 Msa0761780:intron 25.0%
! TAAAAGAATATGTGTTTGAG+AGG + chr5_2:19356549-19356568 Msa0761780:intron 25.0%
! AAAAGAATATGTGTTTGAGA+GGG + chr5_2:19356550-19356569 Msa0761780:intron 25.0%
!! GTTCTCGTTGTTTAATTTAT+AGG + chr5_2:19356738-19356757 Msa0761780:intron 25.0%
!! TGTTTAATTTATAGGAGACA+AGG + chr5_2:19356746-19356765 Msa0761780:intron 25.0%
!!! TTTTTTTTATGGTATTGAGG+TGG - chr5_2:19357016-19357035 None:intergenic 25.0%
!!! ACATATACAACTGATTTTGA+TGG - chr5_2:19357107-19357126 None:intergenic 25.0%
!! ATAGCAAAAAACGATTTTTG+TGG + chr5_2:19357192-19357211 Msa0761780:CDS 25.0%
!! TAGCAAAAAACGATTTTTGT+GGG + chr5_2:19357193-19357212 Msa0761780:CDS 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG - chr5_2:19357419-19357438 None:intergenic 25.0%
! CTGATCAACAAATTAATAGT+AGG + chr5_2:19357426-19357445 Msa0761780:CDS 25.0%
! ATATGAAGGATGTTTGTAAT+AGG + chr5_2:19357480-19357499 Msa0761780:CDS 25.0%
! TGATATTATGATGAACAAGA+AGG + chr5_2:19357526-19357545 Msa0761780:CDS 25.0%
!! TATACTGAATCAAATTTTGG+AGG - chr5_2:19357631-19357650 None:intergenic 25.0%
TTGAGTGTAAGTTTGTATGA+TGG - chr5_2:19355767-19355786 None:intergenic 30.0%
TAAGTTCGATTGAATTCAAG+TGG + chr5_2:19355908-19355927 Msa0761780:intron 30.0%
CAATATGTCCTAAGATTTAC+TGG + chr5_2:19356010-19356029 Msa0761780:intron 30.0%
AAGATCAACCAGTAAATCTT+AGG - chr5_2:19356021-19356040 None:intergenic 30.0%
AATTAGACTAGTGTTTACGT+TGG - chr5_2:19356084-19356103 None:intergenic 30.0%
TTAATACTCACTCTCTTATC+GGG + chr5_2:19356454-19356473 Msa0761780:intron 30.0%
TTTGCATAAATATACGACCA+AGG - chr5_2:19356699-19356718 None:intergenic 30.0%
GAGAAGAAATACTTGAGATT+TGG + chr5_2:19357156-19357175 Msa0761780:CDS 30.0%
ACAAGAAAAAGGACTATTGA+AGG + chr5_2:19357235-19357254 Msa0761780:CDS 30.0%
AAATAAGGCCAACATATCAT+AGG - chr5_2:19357404-19357423 None:intergenic 30.0%
TAGGAATGTTGTTGAGAAAA+TGG + chr5_2:19357499-19357518 Msa0761780:CDS 30.0%
TATTATGATGAACAAGAAGG+AGG + chr5_2:19357529-19357548 Msa0761780:CDS 30.0%
TTCAAGATCTGCTATTGAAA+TGG + chr5_2:19357556-19357575 Msa0761780:CDS 30.0%
TTGAGTGTAAGTTTGTATGA+TGG - chr5_2:19355767-19355786 None:intergenic 30.0%
TAAGTTCGATTGAATTCAAG+TGG + chr5_2:19355908-19355927 Msa0761780:intron 30.0%
CAATATGTCCTAAGATTTAC+TGG + chr5_2:19356010-19356029 Msa0761780:intron 30.0%
AAGATCAACCAGTAAATCTT+AGG - chr5_2:19356021-19356040 None:intergenic 30.0%
AATTAGACTAGTGTTTACGT+TGG - chr5_2:19356084-19356103 None:intergenic 30.0%
TTAATACTCACTCTCTTATC+GGG + chr5_2:19356454-19356473 Msa0761780:intron 30.0%
TTTGCATAAATATACGACCA+AGG - chr5_2:19356699-19356718 None:intergenic 30.0%
GAGAAGAAATACTTGAGATT+TGG + chr5_2:19357156-19357175 Msa0761780:CDS 30.0%
ACAAGAAAAAGGACTATTGA+AGG + chr5_2:19357235-19357254 Msa0761780:CDS 30.0%
AAATAAGGCCAACATATCAT+AGG - chr5_2:19357404-19357423 None:intergenic 30.0%
TAGGAATGTTGTTGAGAAAA+TGG + chr5_2:19357499-19357518 Msa0761780:CDS 30.0%
TATTATGATGAACAAGAAGG+AGG + chr5_2:19357529-19357548 Msa0761780:CDS 30.0%
TTCAAGATCTGCTATTGAAA+TGG + chr5_2:19357556-19357575 Msa0761780:CDS 30.0%
!! TAAGTAAAACTGTCGACTTG+TGG + chr5_2:19355654-19355673 Msa0761780:intron 35.0%
! TTACACTCAAAGTATCCGTA+TGG + chr5_2:19355777-19355796 Msa0761780:intron 35.0%
AGTTACCATTTGTAAACCAG+CGG + chr5_2:19356044-19356063 Msa0761780:intron 35.0%
!! CAAACTGCTCTTTGAGTTTT+TGG + chr5_2:19356307-19356326 Msa0761780:intron 35.0%
CATACCACAATTCAAAACCT+TGG + chr5_2:19356679-19356698 Msa0761780:intron 35.0%
ATTTATAGGAGACAAGGACA+TGG + chr5_2:19356752-19356771 Msa0761780:intron 35.0%
TTTCGGTACAACAAACAAAG+AGG + chr5_2:19356836-19356855 Msa0761780:CDS 35.0%
! ATTGACTTTAAGCGATGGTT+GGG - chr5_2:19356895-19356914 None:intergenic 35.0%
!! AATGCATTGACTTTAAGCGA+TGG - chr5_2:19356900-19356919 None:intergenic 35.0%
!! TTTTTATGGTATTGAGGTGG+TGG - chr5_2:19357013-19357032 None:intergenic 35.0%
CAACTGCAATTTCTTCAAAG+TGG + chr5_2:19357049-19357068 Msa0761780:CDS 35.0%
TCAGTTGTATATGTCAGCTT+TGG + chr5_2:19357113-19357132 Msa0761780:CDS 35.0%
GAAATACTTGAGATTTGGCA+TGG + chr5_2:19357161-19357180 Msa0761780:CDS 35.0%
! AACGATTTTTGTGGGTGATT+AGG + chr5_2:19357201-19357220 Msa0761780:CDS 35.0%
! CCTTTTTCTTGTACCATGTT+TGG - chr5_2:19357227-19357246 None:intergenic 35.0%
CCAAACATGGTACAAGAAAA+AGG + chr5_2:19357224-19357243 Msa0761780:CDS 35.0%
AAGGGACTACTAAAGAGAAA+GGG + chr5_2:19357267-19357286 Msa0761780:CDS 35.0%
TAAAGAGAAAGGGATGATTG+TGG + chr5_2:19357277-19357296 Msa0761780:CDS 35.0%
AAAGAGAAAGGGATGATTGT+GGG + chr5_2:19357278-19357297 Msa0761780:CDS 35.0%
! GTTTTGTCACACAAAGCAAT+TGG + chr5_2:19357320-19357339 Msa0761780:CDS 35.0%
TAATAGTAGGTTTGTGAGTG+AGG + chr5_2:19357439-19357458 Msa0761780:CDS 35.0%
AAGATCTGCTATTGAAATGG+CGG + chr5_2:19357559-19357578 Msa0761780:CDS 35.0%
!! CAAATTTTGGAGGTTGTTGT+AGG - chr5_2:19357621-19357640 None:intergenic 35.0%
!! TAAGTAAAACTGTCGACTTG+TGG + chr5_2:19355654-19355673 Msa0761780:intron 35.0%
! TTACACTCAAAGTATCCGTA+TGG + chr5_2:19355777-19355796 Msa0761780:intron 35.0%
AGTTACCATTTGTAAACCAG+CGG + chr5_2:19356044-19356063 Msa0761780:intron 35.0%
!! CAAACTGCTCTTTGAGTTTT+TGG + chr5_2:19356307-19356326 Msa0761780:intron 35.0%
CATACCACAATTCAAAACCT+TGG + chr5_2:19356679-19356698 Msa0761780:intron 35.0%
ATTTATAGGAGACAAGGACA+TGG + chr5_2:19356752-19356771 Msa0761780:intron 35.0%
TTTCGGTACAACAAACAAAG+AGG + chr5_2:19356836-19356855 Msa0761780:CDS 35.0%
! ATTGACTTTAAGCGATGGTT+GGG - chr5_2:19356895-19356914 None:intergenic 35.0%
!! AATGCATTGACTTTAAGCGA+TGG - chr5_2:19356900-19356919 None:intergenic 35.0%
!! TTTTTATGGTATTGAGGTGG+TGG - chr5_2:19357013-19357032 None:intergenic 35.0%
CAACTGCAATTTCTTCAAAG+TGG + chr5_2:19357049-19357068 Msa0761780:CDS 35.0%
TCAGTTGTATATGTCAGCTT+TGG + chr5_2:19357113-19357132 Msa0761780:CDS 35.0%
GAAATACTTGAGATTTGGCA+TGG + chr5_2:19357161-19357180 Msa0761780:CDS 35.0%
! AACGATTTTTGTGGGTGATT+AGG + chr5_2:19357201-19357220 Msa0761780:CDS 35.0%
! CCTTTTTCTTGTACCATGTT+TGG - chr5_2:19357227-19357246 None:intergenic 35.0%
CCAAACATGGTACAAGAAAA+AGG + chr5_2:19357224-19357243 Msa0761780:CDS 35.0%
AAGGGACTACTAAAGAGAAA+GGG + chr5_2:19357267-19357286 Msa0761780:CDS 35.0%
TAAAGAGAAAGGGATGATTG+TGG + chr5_2:19357277-19357296 Msa0761780:CDS 35.0%
AAAGAGAAAGGGATGATTGT+GGG + chr5_2:19357278-19357297 Msa0761780:CDS 35.0%
! GTTTTGTCACACAAAGCAAT+TGG + chr5_2:19357320-19357339 Msa0761780:CDS 35.0%
TAATAGTAGGTTTGTGAGTG+AGG + chr5_2:19357439-19357458 Msa0761780:CDS 35.0%
AAGATCTGCTATTGAAATGG+CGG + chr5_2:19357559-19357578 Msa0761780:CDS 35.0%
!! CAAATTTTGGAGGTTGTTGT+AGG - chr5_2:19357621-19357640 None:intergenic 35.0%
! TTCGATGAAGCAGTTTTCGA+AGG + chr5_2:19355581-19355600 Msa0761780:CDS 40.0%
!! AACAACCGCTGGTTTACAAA+TGG - chr5_2:19356052-19356071 None:intergenic 40.0%
!!! ACGACCAAGGTTTTGAATTG+TGG - chr5_2:19356686-19356705 None:intergenic 40.0%
TGTAGAGATCTACCACGTTT+CGG + chr5_2:19356819-19356838 Msa0761780:CDS 40.0%
!! TTGTTTGTTGTACCGAAACG+TGG - chr5_2:19356834-19356853 None:intergenic 40.0%
!! CATTGACTTTAAGCGATGGT+TGG - chr5_2:19356896-19356915 None:intergenic 40.0%
ACGAATTTGGGAGAGAATTG+GGG - chr5_2:19356952-19356971 None:intergenic 40.0%
GACGAATTTGGGAGAGAATT+GGG - chr5_2:19356953-19356972 None:intergenic 40.0%
AGACGAATTTGGGAGAGAAT+TGG - chr5_2:19356954-19356973 None:intergenic 40.0%
TGGATAAAACCTGCATGACA+TGG + chr5_2:19357069-19357088 Msa0761780:CDS 40.0%
TATTGAAGGAGCTTGAGGAA+GGG + chr5_2:19357249-19357268 Msa0761780:CDS 40.0%
GAAGGGACTACTAAAGAGAA+AGG + chr5_2:19357266-19357285 Msa0761780:CDS 40.0%
AAGAGAAAGGGATGATTGTG+GGG + chr5_2:19357279-19357298 Msa0761780:CDS 40.0%
! GTGCCTTTTTGACACATAGT+GGG + chr5_2:19357342-19357361 Msa0761780:CDS 40.0%
TGAGTGAGGTTTGGAAACTT+GGG + chr5_2:19357453-19357472 Msa0761780:CDS 40.0%
!! GAAACTTGGGTTGGATATGA+AGG + chr5_2:19357466-19357485 Msa0761780:CDS 40.0%
!! TGCTATTGAAATGGCGGATT+TGG + chr5_2:19357565-19357584 Msa0761780:CDS 40.0%
! TCCAAGAGTGTAAGTCCTAA+TGG + chr5_2:19357590-19357609 Msa0761780:CDS 40.0%
ACCATTAGGACTTACACTCT+TGG - chr5_2:19357594-19357613 None:intergenic 40.0%
TTGTTGTAGGAGGAACCATT+AGG - chr5_2:19357608-19357627 None:intergenic 40.0%
!! ATTTTGGAGGTTGTTGTAGG+AGG - chr5_2:19357618-19357637 None:intergenic 40.0%
! TTCGATGAAGCAGTTTTCGA+AGG + chr5_2:19355581-19355600 Msa0761780:CDS 40.0%
!! AACAACCGCTGGTTTACAAA+TGG - chr5_2:19356052-19356071 None:intergenic 40.0%
!!! ACGACCAAGGTTTTGAATTG+TGG - chr5_2:19356686-19356705 None:intergenic 40.0%
TGTAGAGATCTACCACGTTT+CGG + chr5_2:19356819-19356838 Msa0761780:CDS 40.0%
!! TTGTTTGTTGTACCGAAACG+TGG - chr5_2:19356834-19356853 None:intergenic 40.0%
!! CATTGACTTTAAGCGATGGT+TGG - chr5_2:19356896-19356915 None:intergenic 40.0%
ACGAATTTGGGAGAGAATTG+GGG - chr5_2:19356952-19356971 None:intergenic 40.0%
GACGAATTTGGGAGAGAATT+GGG - chr5_2:19356953-19356972 None:intergenic 40.0%
AGACGAATTTGGGAGAGAAT+TGG - chr5_2:19356954-19356973 None:intergenic 40.0%
TGGATAAAACCTGCATGACA+TGG + chr5_2:19357069-19357088 Msa0761780:CDS 40.0%
TATTGAAGGAGCTTGAGGAA+GGG + chr5_2:19357249-19357268 Msa0761780:CDS 40.0%
GAAGGGACTACTAAAGAGAA+AGG + chr5_2:19357266-19357285 Msa0761780:CDS 40.0%
AAGAGAAAGGGATGATTGTG+GGG + chr5_2:19357279-19357298 Msa0761780:CDS 40.0%
! GTGCCTTTTTGACACATAGT+GGG + chr5_2:19357342-19357361 Msa0761780:CDS 40.0%
TGAGTGAGGTTTGGAAACTT+GGG + chr5_2:19357453-19357472 Msa0761780:CDS 40.0%
!! GAAACTTGGGTTGGATATGA+AGG + chr5_2:19357466-19357485 Msa0761780:CDS 40.0%
!! TGCTATTGAAATGGCGGATT+TGG + chr5_2:19357565-19357584 Msa0761780:CDS 40.0%
! TCCAAGAGTGTAAGTCCTAA+TGG + chr5_2:19357590-19357609 Msa0761780:CDS 40.0%
ACCATTAGGACTTACACTCT+TGG - chr5_2:19357594-19357613 None:intergenic 40.0%
TTGTTGTAGGAGGAACCATT+AGG - chr5_2:19357608-19357627 None:intergenic 40.0%
!! ATTTTGGAGGTTGTTGTAGG+AGG - chr5_2:19357618-19357637 None:intergenic 40.0%
! GATGAAGCAGTTTTCGAAGG+TGG + chr5_2:19355584-19355603 Msa0761780:CDS 45.0%
ACTCGTTTCTCGCTTCCATA+CGG - chr5_2:19355795-19355814 None:intergenic 45.0%
! GGATTTTCGTAAACAACCGC+TGG - chr5_2:19356063-19356082 None:intergenic 45.0%
GGGGACTTGAAGACGAATTT+GGG - chr5_2:19356964-19356983 None:intergenic 45.0%
TGGGGACTTGAAGACGAATT+TGG - chr5_2:19356965-19356984 None:intergenic 45.0%
GTCCCCAAACTCTACACTAT+TGG + chr5_2:19356978-19356997 Msa0761780:CDS 45.0%
GGCCAATAGTGTAGAGTTTG+GGG - chr5_2:19356983-19357002 None:intergenic 45.0%
GGGCCAATAGTGTAGAGTTT+GGG - chr5_2:19356984-19357003 None:intergenic 45.0%
AGGACTATTGAAGGAGCTTG+AGG + chr5_2:19357244-19357263 Msa0761780:CDS 45.0%
CTATTGAAGGAGCTTGAGGA+AGG + chr5_2:19357248-19357267 Msa0761780:CDS 45.0%
! GGTGCCTTTTTGACACATAG+TGG + chr5_2:19357341-19357360 Msa0761780:CDS 45.0%
CCACCCACTATGTGTCAAAA+AGG - chr5_2:19357348-19357367 None:intergenic 45.0%
!! CCTTTTTGACACATAGTGGG+TGG + chr5_2:19357345-19357364 Msa0761780:CDS 45.0%
! TAGTGGGTGGAACTCTACTT+TGG + chr5_2:19357358-19357377 Msa0761780:CDS 45.0%
! GAACTCTACTTTGGAGAGTG+TGG + chr5_2:19357367-19357386 Msa0761780:CDS 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG + chr5_2:19357374-19357393 Msa0761780:CDS 45.0%
! CTTTGGAGAGTGTGGTTTGT+GGG + chr5_2:19357375-19357394 Msa0761780:CDS 45.0%
! TTTGGAGAGTGTGGTTTGTG+GGG + chr5_2:19357376-19357395 Msa0761780:CDS 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG + chr5_2:19357444-19357463 Msa0761780:CDS 45.0%
GTGAGTGAGGTTTGGAAACT+TGG + chr5_2:19357452-19357471 Msa0761780:CDS 45.0%
TGAGGTTTGGAAACTTGGGT+TGG + chr5_2:19357457-19357476 Msa0761780:CDS 45.0%
! GATGAAGCAGTTTTCGAAGG+TGG + chr5_2:19355584-19355603 Msa0761780:CDS 45.0%
ACTCGTTTCTCGCTTCCATA+CGG - chr5_2:19355795-19355814 None:intergenic 45.0%
! GGATTTTCGTAAACAACCGC+TGG - chr5_2:19356063-19356082 None:intergenic 45.0%
GGGGACTTGAAGACGAATTT+GGG - chr5_2:19356964-19356983 None:intergenic 45.0%
TGGGGACTTGAAGACGAATT+TGG - chr5_2:19356965-19356984 None:intergenic 45.0%
GTCCCCAAACTCTACACTAT+TGG + chr5_2:19356978-19356997 Msa0761780:CDS 45.0%
GGCCAATAGTGTAGAGTTTG+GGG - chr5_2:19356983-19357002 None:intergenic 45.0%
GGGCCAATAGTGTAGAGTTT+GGG - chr5_2:19356984-19357003 None:intergenic 45.0%
AGGACTATTGAAGGAGCTTG+AGG + chr5_2:19357244-19357263 Msa0761780:CDS 45.0%
CTATTGAAGGAGCTTGAGGA+AGG + chr5_2:19357248-19357267 Msa0761780:CDS 45.0%
! GGTGCCTTTTTGACACATAG+TGG + chr5_2:19357341-19357360 Msa0761780:CDS 45.0%
CCACCCACTATGTGTCAAAA+AGG - chr5_2:19357348-19357367 None:intergenic 45.0%
!! CCTTTTTGACACATAGTGGG+TGG + chr5_2:19357345-19357364 Msa0761780:CDS 45.0%
! TAGTGGGTGGAACTCTACTT+TGG + chr5_2:19357358-19357377 Msa0761780:CDS 45.0%
! GAACTCTACTTTGGAGAGTG+TGG + chr5_2:19357367-19357386 Msa0761780:CDS 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG + chr5_2:19357374-19357393 Msa0761780:CDS 45.0%
! CTTTGGAGAGTGTGGTTTGT+GGG + chr5_2:19357375-19357394 Msa0761780:CDS 45.0%
! TTTGGAGAGTGTGGTTTGTG+GGG + chr5_2:19357376-19357395 Msa0761780:CDS 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG + chr5_2:19357444-19357463 Msa0761780:CDS 45.0%
GTGAGTGAGGTTTGGAAACT+TGG + chr5_2:19357452-19357471 Msa0761780:CDS 45.0%
TGAGGTTTGGAAACTTGGGT+TGG + chr5_2:19357457-19357476 Msa0761780:CDS 45.0%
CGCATCATAAGAAACGTGCC+TGG + chr5_2:19356777-19356796 Msa0761780:CDS 50.0%
CATAAGAAACGTGCCTGGCA+TGG + chr5_2:19356782-19356801 Msa0761780:CDS 50.0%
CGAAGTATGTTCTCCATGCC+AGG - chr5_2:19356798-19356817 None:intergenic 50.0%
GGGGCCAATAGTGTAGAGTT+TGG - chr5_2:19356985-19357004 None:intergenic 50.0%
! TATTGAGGTGGTGGTGAAGG+GGG - chr5_2:19357004-19357023 None:intergenic 50.0%
! GTATTGAGGTGGTGGTGAAG+GGG - chr5_2:19357005-19357024 None:intergenic 50.0%
! GGTATTGAGGTGGTGGTGAA+GGG - chr5_2:19357006-19357025 None:intergenic 50.0%
! TGGTATTGAGGTGGTGGTGA+AGG - chr5_2:19357007-19357026 None:intergenic 50.0%
AGAATCGAGCCATGTCATGC+AGG - chr5_2:19357081-19357100 None:intergenic 50.0%
GTGGGTGATTAGGCCAAACA+TGG + chr5_2:19357211-19357230 Msa0761780:CDS 50.0%
AGAAAGGGATGATTGTGGGG+TGG + chr5_2:19357282-19357301 Msa0761780:CDS 50.0%
GAAAGGGATGATTGTGGGGT+GGG + chr5_2:19357283-19357302 Msa0761780:CDS 50.0%
! GTGGGGTGCCTATGATATGT+TGG + chr5_2:19357393-19357412 Msa0761780:CDS 50.0%
CGCATCATAAGAAACGTGCC+TGG + chr5_2:19356777-19356796 Msa0761780:CDS 50.0%
CATAAGAAACGTGCCTGGCA+TGG + chr5_2:19356782-19356801 Msa0761780:CDS 50.0%
CGAAGTATGTTCTCCATGCC+AGG - chr5_2:19356798-19356817 None:intergenic 50.0%
GGGGCCAATAGTGTAGAGTT+TGG - chr5_2:19356985-19357004 None:intergenic 50.0%
! TATTGAGGTGGTGGTGAAGG+GGG - chr5_2:19357004-19357023 None:intergenic 50.0%
! GTATTGAGGTGGTGGTGAAG+GGG - chr5_2:19357005-19357024 None:intergenic 50.0%
! GGTATTGAGGTGGTGGTGAA+GGG - chr5_2:19357006-19357025 None:intergenic 50.0%
! TGGTATTGAGGTGGTGGTGA+AGG - chr5_2:19357007-19357026 None:intergenic 50.0%
AGAATCGAGCCATGTCATGC+AGG - chr5_2:19357081-19357100 None:intergenic 50.0%
GTGGGTGATTAGGCCAAACA+TGG + chr5_2:19357211-19357230 Msa0761780:CDS 50.0%
AGAAAGGGATGATTGTGGGG+TGG + chr5_2:19357282-19357301 Msa0761780:CDS 50.0%
GAAAGGGATGATTGTGGGGT+GGG + chr5_2:19357283-19357302 Msa0761780:CDS 50.0%
! GTGGGGTGCCTATGATATGT+TGG + chr5_2:19357393-19357412 Msa0761780:CDS 50.0%
! TGTGGGGTGGGTTTCACAAG+AGG + chr5_2:19357295-19357314 Msa0761780:CDS 55.0%
! TGTGGGGTGGGTTTCACAAG+AGG + chr5_2:19357295-19357314 Msa0761780:CDS 55.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 19355557 19357670 19355557 ID=Msa0761780;Name=Msa0761780
chr5_2 mRNA 19355557 19357670 19355557 ID=Msa0761780-mRNA-1;Parent=Msa0761780;Name=Msa0761780-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|0.5|1|1|2|0|319
chr5_2 exon 19355557 19355605 19355557 ID=Msa0761780-mRNA-1:exon:8289;Parent=Msa0761780-mRNA-1
chr5_2 exon 19356760 19357670 19356760 ID=Msa0761780-mRNA-1:exon:8290;Parent=Msa0761780-mRNA-1
chr5_2 CDS 19355557 19355605 19355557 ID=Msa0761780-mRNA-1:cds;Parent=Msa0761780-mRNA-1
chr5_2 CDS 19356760 19357670 19356760 ID=Msa0761780-mRNA-1:cds;Parent=Msa0761780-mRNA-1
Gene Sequence

>Msa0761780

ATGGGTTCGAAGATGGTAGAAGACTTCGATGAAGCAGTTTTCGAAGGTGGAGACAAGGACATGGATCGCATCATAAGAAACGTGCCTGGCATGGAGAACATACTTCGATGTAGAGATCTACCACGTTTCGGTACAACAAACAAAGAGGACCATATCGTTTTAGATAAAGTTTTACAACTAACCCAACCATCGCTTAAAGTCAATGCATTAATACTCAACACATTTGAAGATCTAGAGTCCCCAATTCTCTCCCAAATTCGTCTTCAAGTCCCCAAACTCTACACTATTGGCCCCCTTCACCACCACCTCAATACCATAAAAAAAACAACATCATCTTTCAACTGCAATTTCTTCAAAGTGGATAAAACCTGCATGACATGGCTCGATTCTCAACCATCAAAATCAGTTGTATATGTCAGCTTTGGCAGCATCACTACAATGACAAGAGAAGAAATACTTGAGATTTGGCATGGTTTATTGAATAGCAAAAAACGATTTTTGTGGGTGATTAGGCCAAACATGGTACAAGAAAAAGGACTATTGAAGGAGCTTGAGGAAGGGACTACTAAAGAGAAAGGGATGATTGTGGGGTGGGTTTCACAAGAGGAAGTTTTGTCACACAAAGCAATTGGTGCCTTTTTGACACATAGTGGGTGGAACTCTACTTTGGAGAGTGTGGTTTGTGGGGTGCCTATGATATGTTGGCCTTATTTTGCTGATCAACAAATTAATAGTAGGTTTGTGAGTGAGGTTTGGAAACTTGGGTTGGATATGAAGGATGTTTGTAATAGGAATGTTGTTGAGAAAATGGTGAATGATATTATGATGAACAAGAAGGAGGAGTTTTCAAGATCTGCTATTGAAATGGCGGATTTGGCTTCCAAGAGTGTAAGTCCTAATGGTTCCTCCTACAACAACCTCCAAAATTTGATTCAGTATATAAGGTCTACTAGCCCATAA
Protein sequence

>Msa0761780

MGSKMVEDFDEAVFEGGDKDMDRIIRNVPGMENILRCRDLPRFGTTNKEDHIVLDKVLQLTQPSLKVNALILNTFEDLESPILSQIRLQVPKLYTIGPLHHHLNTIKKTTSSFNCNFFKVDKTCMTWLDSQPSKSVVYVSFGSITTMTREEILEIWHGLLNSKKRFLWVIRPNMVQEKGLLKELEEGTTKEKGMIVGWVSQEEVLSHKAIGAFLTHSGWNSTLESVVCGVPMICWPYFADQQINSRFVSEVWKLGLDMKDVCNRNVVEKMVNDIMMNKKEEFSRSAIEMADLASKSVSPNGSSYNNLQNLIQYIRSTSP*