AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0842230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0842230 MtrunA17_Chr5g0412111 87.527 465 56 2 1 463 1 465 0.0 851
Msa0842230 MtrunA17_Chr5g0412131 81.250 464 82 2 4 463 11 473 0.0 769
Msa0842230 MtrunA17_Chr5g0412101 79.355 465 92 1 3 463 10 474 0.0 764
Msa0842230 MtrunA17_Chr5g0426431 39.709 481 249 13 5 459 12 477 4.65e-101 310
Msa0842230 MtrunA17_Chr3g0092641 38.223 484 254 14 4 459 11 477 3.24e-97 300
Msa0842230 MtrunA17_Chr2g0278711 36.864 472 277 10 4 459 10 476 2.60e-94 293
Msa0842230 MtrunA17_Chr6g0454141 34.172 477 287 10 4 459 9 479 7.53e-94 292
Msa0842230 MtrunA17_Chr3g0118691 35.430 477 283 10 2 459 12 482 2.06e-93 291
Msa0842230 MtrunA17_Chr6g0454261 33.750 480 285 10 4 459 9 479 3.70e-93 290
Msa0842230 MtrunA17_Chr6g0454121 36.076 474 277 11 4 457 9 476 3.45e-92 288
Msa0842230 MtrunA17_Chr6g0454191 35.220 477 283 11 4 459 9 480 7.82e-92 287
Msa0842230 MtrunA17_Chr3g0118671 35.443 474 275 11 5 456 6 470 2.29e-91 285
Msa0842230 MtrunA17_Chr6g0454331 33.543 477 292 9 4 459 6 478 2.33e-91 286
Msa0842230 MtrunA17_Chr4g0050341 35.000 480 275 10 4 456 18 487 8.22e-91 285
Msa0842230 MtrunA17_Chr6g0454131 36.175 481 267 11 4 457 9 476 1.51e-90 283
Msa0842230 MtrunA17_Chr6g0454401 33.613 476 292 9 4 459 9 480 3.91e-90 282
Msa0842230 MtrunA17_Chr3g0118661 36.667 480 268 12 2 457 10 477 6.62e-90 282
Msa0842230 MtrunA17_Chr6g0453961 32.432 481 291 10 4 459 18 489 1.35e-89 281
Msa0842230 MtrunA17_Chr3g0118771 34.440 482 277 10 2 457 18 486 1.58e-89 281
Msa0842230 MtrunA17_Chr7g0217881 35.593 472 269 8 4 459 9 461 1.90e-89 280
Msa0842230 MtrunA17_Chr6g0454301 34.884 473 287 10 4 459 262 730 4.20e-88 284
Msa0842230 MtrunA17_Chr6g0454301 42.667 225 126 3 236 457 3 227 3.93e-53 190
Msa0842230 MtrunA17_Chr6g0454291 34.874 476 285 10 4 459 6 476 5.09e-88 277
Msa0842230 MtrunA17_Chr3g0118701 34.647 482 276 12 2 457 12 480 9.50e-88 276
Msa0842230 MtrunA17_Chr6g0453951 33.473 478 289 12 4 459 56 526 3.57e-87 276
Msa0842230 MtrunA17_Chr8g0359821 32.777 479 289 12 4 459 9 477 1.42e-86 273
Msa0842230 MtrunA17_Chr6g0454181 32.211 475 299 9 4 459 9 479 2.61e-86 273
Msa0842230 MtrunA17_Chr6g0454201 34.454 476 287 11 4 459 10 480 1.12e-84 268
Msa0842230 MtrunA17_Chr3g0118711 32.924 489 289 10 2 464 10 485 1.34e-84 268
Msa0842230 MtrunA17_Chr6g0452771 33.684 475 292 9 4 459 9 479 2.77e-84 267
Msa0842230 MtrunA17_Chr6g0454341 32.558 473 294 10 4 457 9 475 3.65e-84 267
Msa0842230 MtrunA17_Chr3g0078841 32.484 471 297 9 4 457 9 475 4.77e-84 266
Msa0842230 MtrunA17_Chr8g0336331 32.484 471 298 8 5 459 10 476 1.42e-83 265
Msa0842230 MtrunA17_Chr6g0454361 33.263 472 292 11 4 456 10 477 8.22e-83 263
Msa0842230 MtrunA17_Chr6g0454211 33.817 482 282 10 4 459 296 766 1.97e-82 270
Msa0842230 MtrunA17_Chr6g0454211 33.077 260 137 5 125 378 8 236 3.07e-41 157
Msa0842230 MtrunA17_Chr5g0423981 33.406 461 277 9 4 459 9 444 2.84e-82 261
Msa0842230 MtrunA17_Chr6g0454151 34.232 482 278 13 4 459 9 477 5.02e-82 261
Msa0842230 MtrunA17_Chr6g0454351 32.773 476 278 13 4 459 11 464 1.96e-80 257
Msa0842230 MtrunA17_Chr6g0454321 32.088 455 288 9 5 442 10 460 7.41e-80 260
Msa0842230 MtrunA17_Chr3g0118751 32.917 480 258 11 2 457 3 442 9.33e-78 249
Msa0842230 MtrunA17_Chr3g0112771 33.895 475 267 14 6 464 13 456 1.45e-76 246
Msa0842230 MtrunA17_Chr4g0032331 34.519 478 262 15 6 464 9 454 3.35e-75 243
Msa0842230 MtrunA17_Chr5g0426401 44.371 302 156 8 166 459 13 310 4.32e-75 238
Msa0842230 MtrunA17_Chr3g0112761 33.824 476 270 13 5 464 8 454 3.94e-74 240
Msa0842230 MtrunA17_Chr6g0454271 38.516 283 171 3 180 459 4 286 9.84e-69 221
Msa0842230 MtrunA17_Chr6g0454251 33.249 394 241 8 4 379 6 395 1.70e-66 218
Msa0842230 MtrunA17_Chr8g0380531 32.558 473 282 16 5 462 10 460 2.36e-62 209
Msa0842230 MtrunA17_Chr7g0218821 31.546 485 273 14 1 460 1 451 6.72e-62 208
Msa0842230 MtrunA17_Chr5g0414321 31.106 479 276 15 5 463 11 455 8.66e-61 205
Msa0842230 MtrunA17_Chr7g0218811 29.522 481 273 12 1 458 11 448 2.13e-60 204
Msa0842230 MtrunA17_Chr7g0218831 31.866 477 260 15 4 458 5 438 2.85e-60 203
Msa0842230 MtrunA17_Chr5g0414331 30.898 479 277 15 5 463 13 457 4.15e-60 203
Msa0842230 MtrunA17_Chr7g0249981 29.787 470 288 13 5 461 25 465 1.32e-59 203
Msa0842230 MtrunA17_Chr3g0118721 34.982 283 178 3 183 459 7 289 5.11e-59 196
Msa0842230 MtrunA17_Chr7g0218841 31.423 471 271 14 4 458 5 439 5.95e-59 200
Msa0842230 MtrunA17_Chr7g0250001 29.810 473 277 14 5 456 6 444 9.11e-59 200
Msa0842230 MtrunA17_Chr6g0464881 30.380 474 281 16 2 456 8 451 7.04e-58 197
Msa0842230 MtrunA17_Chr6g0454221 42.478 226 126 3 236 457 3 228 2.29e-57 191
Msa0842230 MtrunA17_Chr6g0464871 30.720 472 276 18 5 456 23 463 6.60e-56 192
Msa0842230 MtrunA17_Chr1g0207981 30.000 480 299 14 5 463 13 476 7.31e-56 192
Msa0842230 MtrunA17_Chr6g0464921 31.237 477 272 19 3 456 9 452 7.63e-56 192
Msa0842230 MtrunA17_Chr8g0366391 30.705 482 302 14 5 463 9 481 3.24e-55 191
Msa0842230 MtrunA17_Chr3g0121991 31.417 487 282 13 5 459 79 545 8.86e-55 191
Msa0842230 MtrunA17_Chr1g0207861 29.645 479 299 16 5 461 8 470 2.40e-53 186
Msa0842230 MtrunA17_Chr5g0401721 28.118 473 312 13 2 456 5 467 1.36e-52 184
Msa0842230 MtrunA17_Chr8g0355011 31.198 359 197 8 108 459 46 361 1.74e-52 181
Msa0842230 MtrunA17_Chr1g0161351 29.106 481 297 15 5 460 37 498 1.10e-51 182
Msa0842230 MtrunA17_Chr7g0265151 31.621 506 274 20 5 464 9 488 1.26e-51 181
Msa0842230 MtrunA17_Chr6g0454171 36.466 266 146 6 199 457 58 307 3.59e-51 176
Msa0842230 MtrunA17_Chr7g0249931 28.750 480 282 16 5 461 40 482 4.44e-51 180
Msa0842230 MtrunA17_Chr4g0044511 29.400 500 281 19 5 463 40 508 2.87e-50 178
Msa0842230 MtrunA17_Chr6g0464841 28.870 478 277 16 5 456 11 451 3.06e-50 177
Msa0842230 MtrunA17_Chr8g0377921 29.461 482 288 16 4 456 2 460 7.57e-50 176
Msa0842230 MtrunA17_Chr6g0462531 28.512 477 297 12 6 457 5 462 2.11e-48 172
Msa0842230 MtrunA17_Chr4g0053321 28.025 471 298 16 6 456 27 476 2.85e-48 173
Msa0842230 MtrunA17_Chr5g0429711 30.544 478 287 18 7 463 12 465 3.36e-48 172
Msa0842230 MtrunA17_Chr8g0365811 28.660 485 296 18 6 461 496 959 5.81e-48 177
Msa0842230 MtrunA17_Chr8g0365811 28.791 455 276 19 2 426 5 441 1.60e-43 164
Msa0842230 MtrunA17_Chr7g0265041 28.257 499 311 14 1 464 7 493 7.45e-48 171
Msa0842230 MtrunA17_Chr8g0347281 30.126 478 268 19 4 448 17 461 1.98e-47 170
Msa0842230 MtrunA17_Chr3g0098111 27.984 486 311 14 2 464 5 474 2.69e-47 169
Msa0842230 MtrunA17_Chr1g0207971 28.216 482 285 18 5 460 8 454 4.15e-47 169
Msa0842230 MtrunA17_Chr7g0275511 29.532 491 274 21 4 455 14 471 7.75e-47 168
Msa0842230 MtrunA17_Chr3g0122001 30.629 493 279 14 5 459 6 473 8.14e-47 173
Msa0842230 MtrunA17_Chr3g0122001 30.579 484 290 12 5 459 486 952 1.22e-46 173
Msa0842230 MtrunA17_Chr6g0464861 28.810 479 279 21 3 456 9 450 1.52e-46 167
Msa0842230 MtrunA17_Chr3g0079731 28.340 494 298 14 2 457 3 478 1.76e-46 167
Msa0842230 MtrunA17_Chr6g0462571 28.283 495 286 17 6 464 5 466 2.09e-46 167
Msa0842230 MtrunA17_Chr4g0053501 27.349 479 293 16 5 456 11 461 3.82e-46 167
Msa0842230 MtrunA17_Chr7g0218791 26.834 477 291 12 1 454 1 442 7.31e-46 165
Msa0842230 MtrunA17_Chr1g0179901 28.916 498 291 19 5 459 16 493 7.72e-46 166
Msa0842230 MtrunA17_Chr8g0377941 30.579 484 276 18 6 459 8 461 1.40e-45 165
Msa0842230 MtrunA17_Chr1g0207951 28.870 478 295 17 2 460 120 571 2.22e-45 169
Msa0842230 MtrunA17_Chr1g0207951 28.632 475 304 14 2 459 652 1108 4.36e-44 166
Msa0842230 MtrunA17_Chr8g0335161 28.279 488 282 18 5 455 6 462 2.05e-44 162
Msa0842230 MtrunA17_Chr4g0044501 29.158 487 296 18 5 461 10 477 2.13e-44 162
Msa0842230 MtrunA17_Chr6g0462521 27.426 474 292 13 6 457 5 448 4.88e-44 160
Msa0842230 MtrunA17_Chr7g0249961 36.910 233 133 6 236 461 33 258 1.57e-43 154
Msa0842230 MtrunA17_Chr6g0462541 27.439 492 296 16 6 464 5 468 1.95e-43 159
Msa0842230 MtrunA17_Chr7g0275681 28.032 503 286 15 2 459 9 480 2.06e-43 159
Msa0842230 MtrunA17_Chr1g0207831 26.556 482 309 13 6 464 9 468 2.23e-43 159
Msa0842230 MtrunA17_Chr8g0335141 28.750 480 303 18 4 461 8 470 2.39e-43 159
Msa0842230 MtrunA17_Chr6g0486251 28.631 482 284 16 6 455 7 460 3.27e-43 158
Msa0842230 MtrunA17_Chr6g0486201 28.631 482 284 16 6 455 7 460 3.27e-43 158
Msa0842230 MtrunA17_Chr5g0431441 28.033 478 291 16 5 459 18 465 3.52e-43 158
Msa0842230 MtrunA17_Chr8g0347271 29.350 477 273 18 4 448 18 462 5.24e-43 158
Msa0842230 MtrunA17_Chr6g0454371 41.765 170 97 2 292 459 1 170 6.22e-43 149
Msa0842230 MtrunA17_Chr8g0382021 29.046 482 278 18 10 459 39 488 6.31e-43 158
Msa0842230 MtrunA17_Chr5g0419771 28.200 500 291 18 5 459 36 512 7.14e-43 158
Msa0842230 MtrunA17_Chr6g0462551 28.049 492 294 17 6 464 5 469 1.18e-42 157
Msa0842230 MtrunA17_Chr5g0393591 26.483 472 285 14 5 463 17 439 1.19e-42 156
Msa0842230 MtrunA17_Chr7g0243931 26.899 487 315 15 5 461 17 492 1.49e-42 157
Msa0842230 MtrunA17_Chr8g0373301 32.713 376 200 17 108 455 112 462 1.55e-42 156
Msa0842230 MtrunA17_Chr5g0442581 27.579 504 302 18 1 464 1 481 1.65e-42 157
Msa0842230 MtrunA17_Chr6g0459311 28.008 482 287 18 6 455 14 467 3.53e-42 155
Msa0842230 MtrunA17_Chr7g0265101 27.812 489 308 18 5 459 9 486 3.67e-42 156
Msa0842230 MtrunA17_Chr5g0442601 27.362 508 298 19 1 464 400 880 5.41e-42 159
Msa0842230 MtrunA17_Chr5g0442601 29.900 301 147 12 123 399 76 336 2.88e-27 115
Msa0842230 MtrunA17_Chr7g0243771 27.165 508 283 16 5 461 6 477 1.91e-41 154
Msa0842230 MtrunA17_Chr1g0207931 34.733 262 156 7 215 464 244 502 2.02e-41 154
Msa0842230 MtrunA17_Chr7g0243681 27.163 497 296 19 5 461 11 481 2.25e-41 154
Msa0842230 MtrunA17_Chr7g0243951 27.148 512 281 21 5 461 11 485 2.27e-41 154
Msa0842230 MtrunA17_Chr6g0463851 27.799 518 276 20 1 460 6 483 2.38e-41 154
Msa0842230 MtrunA17_Chr5g0431361 28.395 486 277 17 5 461 12 455 2.46e-41 153
Msa0842230 MtrunA17_Chr7g0243631 27.108 498 300 19 5 461 13 488 2.57e-41 154
Msa0842230 MtrunA17_Chr7g0265111 28.858 499 295 17 5 462 39 518 2.60e-41 154
Msa0842230 MtrunA17_Chr8g0339601 34.733 262 136 8 212 447 66 318 2.88e-41 150
Msa0842230 MtrunA17_Chr8g0361371 29.268 492 275 23 6 456 8 467 3.30e-41 153
Msa0842230 MtrunA17_Chr8g0336691 28.719 484 291 21 2 455 10 469 3.35e-41 157
Msa0842230 MtrunA17_Chr8g0336691 29.461 482 292 17 1 455 915 1375 6.76e-41 156
Msa0842230 MtrunA17_Chr8g0336691 27.079 469 292 18 1 455 476 908 7.79e-34 135
Msa0842230 MtrunA17_Chr3g0106231 28.211 475 280 16 5 459 18 451 3.97e-41 153
Msa0842230 MtrunA17_Chr7g0265141 27.586 493 299 15 5 457 9 483 4.07e-41 153
Msa0842230 MtrunA17_Chr4g0066221 28.512 484 295 17 10 460 16 481 4.12e-41 153
Msa0842230 MtrunA17_Chr5g0440421 29.666 509 281 23 4 459 9 493 8.50e-41 152
Msa0842230 MtrunA17_Chr7g0265051 27.711 498 295 17 5 459 9 484 1.04e-40 152
Msa0842230 MtrunA17_Chr4g0066151 32.986 288 165 7 200 460 194 480 1.10e-40 152
Msa0842230 MtrunA17_Chr4g0060511 26.984 504 296 18 5 461 11 489 2.15e-40 151
Msa0842230 MtrunA17_Chr1g0153451 28.067 481 295 19 2 455 3 459 2.29e-40 150
Msa0842230 MtrunA17_Chr7g0243801 27.219 507 284 16 5 461 7 478 2.30e-40 151
Msa0842230 MtrunA17_Chr8g0339461 34.926 272 142 8 203 448 198 460 2.40e-40 150
Msa0842230 MtrunA17_Chr2g0307961 27.801 482 297 14 4 459 12 468 2.46e-40 150
Msa0842230 MtrunA17_Chr7g0243781 26.347 501 293 17 5 461 9 477 3.00e-40 150
Msa0842230 MtrunA17_Chr5g0448521 27.435 503 285 18 1 459 1 467 3.25e-40 150
Msa0842230 MtrunA17_Chr4g0014061 33.700 273 154 7 213 461 205 474 5.50e-40 150
Msa0842230 MtrunA17_Chr8g0336651 27.629 485 299 17 1 455 777 1239 1.81e-39 152
Msa0842230 MtrunA17_Chr8g0336651 28.689 488 284 17 2 455 3 460 2.49e-36 143
Msa0842230 MtrunA17_Chr8g0336651 34.783 253 129 9 212 455 545 770 2.32e-35 140
Msa0842230 MtrunA17_Chr4g0072761 29.752 363 226 11 105 461 115 454 2.17e-39 147
Msa0842230 MtrunA17_Chr7g0235051 27.215 474 289 13 5 456 11 450 2.30e-39 148
Msa0842230 MtrunA17_Chr5g0442541 26.506 498 294 18 1 459 1 465 2.40e-39 148
Msa0842230 MtrunA17_Chr4g0066281 27.607 489 278 15 10 460 17 467 2.89e-39 147
Msa0842230 MtrunA17_Chr4g0044521 32.258 279 164 8 200 457 190 464 2.94e-39 147
Msa0842230 MtrunA17_Chr8g0339441 40.291 206 101 6 269 452 217 422 3.36e-39 147
Msa0842230 MtrunA17_Chr4g0011051 26.572 493 310 16 5 459 9 487 4.95e-39 147
Msa0842230 MtrunA17_Chr8g0334851 36.264 273 134 6 203 448 199 458 4.99e-39 147
Msa0842230 MtrunA17_Chr7g0232401 32.609 276 150 6 197 448 193 456 5.19e-39 147
Msa0842230 MtrunA17_Chr6g0463891 28.106 491 301 17 6 461 13 486 5.35e-39 147
Msa0842230 MtrunA17_Chr5g0431401 27.521 476 291 14 5 461 10 450 6.03e-39 146
Msa0842230 MtrunA17_Chr6g0454231 32.000 250 130 5 211 457 4 216 6.12e-39 147
Msa0842230 MtrunA17_Chr6g0454231 25.108 231 160 4 4 223 249 477 1.35e-13 72.8
Msa0842230 MtrunA17_Chr2g0302991 33.962 265 151 6 211 457 202 460 6.31e-39 146
Msa0842230 MtrunA17_Chr7g0243871 28.000 500 283 19 5 461 9 474 7.11e-39 147
Msa0842230 MtrunA17_Chr5g0428081 27.364 497 302 14 1 460 6 480 8.76e-39 146
Msa0842230 MtrunA17_Chr5g0420801 27.984 486 287 19 5 460 7 459 8.94e-39 146
Msa0842230 MtrunA17_Chr7g0232411 28.482 481 295 18 2 455 3 461 9.13e-39 146
Msa0842230 MtrunA17_Chr7g0243861 26.253 499 303 18 5 461 14 489 9.21e-39 147
Msa0842230 MtrunA17_Chr4g0072771 27.907 473 303 17 1 461 21 467 1.14e-38 146
Msa0842230 MtrunA17_Chr4g0066261 27.551 490 293 16 10 460 16 482 1.17e-38 146
Msa0842230 MtrunA17_Chr2g0294921 27.959 490 291 17 10 460 165 631 1.41e-38 148
Msa0842230 MtrunA17_Chr8g0339451 34.457 267 140 8 212 452 199 456 1.83e-38 145
Msa0842230 MtrunA17_Chr5g0442491 26.378 508 291 18 1 459 1 474 3.05e-38 145
Msa0842230 MtrunA17_Chr5g0429681 29.876 482 288 19 1 456 39 496 3.42e-38 145
Msa0842230 MtrunA17_Chr2g0302961 32.830 265 154 5 211 457 205 463 3.63e-38 144
Msa0842230 MtrunA17_Chr6g0449931 26.223 511 291 19 1 464 1 472 4.51e-38 144
Msa0842230 MtrunA17_Chr1g0159551 34.717 265 148 5 213 459 202 459 5.36e-38 144
Msa0842230 MtrunA17_Chr5g0448551 25.352 426 292 10 1 419 3 409 6.34e-38 144
Msa0842230 MtrunA17_Chr5g0442561 25.794 504 297 20 1 459 1 472 7.73e-38 144
Msa0842230 MtrunA17_Chr8g0334861 31.970 269 147 6 213 456 203 460 8.05e-38 144
Msa0842230 MtrunA17_Chr5g0442511 27.126 494 282 16 1 460 45 494 8.33e-38 144
Msa0842230 MtrunA17_Chr6g0463861 27.181 493 296 18 1 457 6 471 9.21e-38 144
Msa0842230 MtrunA17_Chr2g0294931 27.092 502 292 15 6 462 12 484 1.01e-37 144
Msa0842230 MtrunA17_Chr4g0066201 27.108 498 290 18 1 460 13 475 1.66e-37 143
Msa0842230 MtrunA17_Chr7g0232331 28.484 488 287 20 2 455 3 462 1.86e-37 142
Msa0842230 MtrunA17_Chr5g0419761 26.884 491 309 15 5 459 9 485 1.92e-37 143
Msa0842230 MtrunA17_Chr1g0173121 36.260 262 141 7 216 459 209 462 2.10e-37 142
Msa0842230 MtrunA17_Chr7g0232341 26.763 482 297 17 5 455 6 462 2.37e-37 142
Msa0842230 MtrunA17_Chr8g0336741 29.091 440 252 19 5 415 13 421 2.47e-37 142
Msa0842230 MtrunA17_Chr8g0336261 44.118 136 75 1 292 426 1 136 3.11e-37 133
Msa0842230 MtrunA17_Chr8g0334831 28.827 503 272 24 6 456 7 475 3.26e-37 142
Msa0842230 MtrunA17_Chr4g0044481 28.954 411 242 12 3 401 25 397 4.16e-37 140
Msa0842230 MtrunA17_Chr7g0243851 26.735 490 270 16 5 461 11 444 6.62e-37 140
Msa0842230 MtrunA17_Chr4g0042891 35.075 268 138 10 212 457 210 463 7.98e-37 141
Msa0842230 MtrunA17_Chr8g0339631 39.500 200 100 7 269 448 259 457 1.15e-36 140
Msa0842230 MtrunA17_Chr8g0336731 28.756 386 225 13 98 456 125 487 1.37e-36 140
Msa0842230 MtrunA17_Chr5g0431421 27.941 476 289 14 5 461 10 450 1.64e-36 139
Msa0842230 MtrunA17_Chr8g0374941 34.066 273 152 7 211 456 1143 1414 1.99e-36 143
Msa0842230 MtrunA17_Chr8g0374941 32.819 259 146 8 211 442 205 462 3.12e-31 127
Msa0842230 MtrunA17_Chr8g0374941 32.558 258 146 7 211 441 670 926 1.93e-30 125
Msa0842230 MtrunA17_Chr7g0232391 25.880 483 305 14 2 455 3 461 2.37e-36 139
Msa0842230 MtrunA17_Chr4g0066131 31.908 304 178 8 185 460 173 475 2.50e-36 139
Msa0842230 MtrunA17_Chr8g0374901 33.096 281 152 8 211 460 204 479 2.85e-36 139
Msa0842230 MtrunA17_Chr5g0401851 25.714 490 313 15 7 461 12 485 5.76e-36 139
Msa0842230 MtrunA17_Chr4g0042931 36.940 268 139 10 211 457 203 461 7.82e-36 138
Msa0842230 MtrunA17_Chr4g0066171 27.108 498 289 16 1 460 16 477 1.27e-35 137
Msa0842230 MtrunA17_Chr8g0369341 26.240 484 308 15 5 460 7 469 1.87e-35 137
Msa0842230 MtrunA17_Chr2g0294941 32.416 327 177 11 110 414 17 321 2.32e-35 135
Msa0842230 MtrunA17_Chr7g0232311 30.252 357 207 12 123 456 123 460 3.42e-35 136
Msa0842230 MtrunA17_Chr7g0243711 34.137 249 143 7 233 461 71 318 3.66e-35 133
Msa0842230 MtrunA17_Chr5g0431371 27.178 482 285 15 5 461 10 450 4.70e-35 135
Msa0842230 MtrunA17_Chr8g0374931 26.078 487 304 15 10 460 16 482 7.41e-35 135
Msa0842230 MtrunA17_Chr6g0453941 29.283 321 158 8 2 320 8 261 1.32e-34 130
Msa0842230 MtrunA17_Chr8g0374971 31.655 278 162 7 210 460 205 481 1.59e-34 135
Msa0842230 MtrunA17_Chr5g0442521 25.000 504 304 17 1 459 1 475 4.47e-34 133
Msa0842230 MtrunA17_Chr7g0243761 27.273 495 273 19 5 461 11 456 5.58e-34 133
Msa0842230 MtrunA17_Chr5g0403641 30.526 285 154 10 201 452 222 495 8.78e-34 133
Msa0842230 MtrunA17_Chr2g0329111 27.119 472 284 20 2 440 3 447 1.42e-33 132
Msa0842230 MtrunA17_Chr5g0432731 33.333 258 148 8 211 456 48 293 1.91e-33 128
Msa0842230 MtrunA17_Chr1g0153461 36.408 206 112 5 269 455 3 208 2.92e-33 125
Msa0842230 MtrunA17_Chr1g0165701 34.272 213 123 5 266 461 273 485 4.58e-33 130
Msa0842230 MtrunA17_Chr8g0355221 32.245 245 146 6 237 461 244 488 7.02e-33 130
Msa0842230 MtrunA17_Chr7g0218311 29.049 389 232 13 99 460 113 484 1.64e-32 129
Msa0842230 MtrunA17_Chr5g0410941 25.859 495 299 15 6 460 24 490 1.98e-32 129
Msa0842230 MtrunA17_Chr5g0416741 24.948 485 322 14 6 461 14 485 2.00e-32 129
Msa0842230 MtrunA17_Chr8g0350881 31.900 279 162 7 211 462 206 483 4.40e-32 128
Msa0842230 MtrunA17_Chr6g0453981 33.663 202 127 3 125 320 8 208 6.17e-32 122
Msa0842230 MtrunA17_Chr7g0241781 27.679 448 251 18 5 433 9 402 3.45e-31 124
Msa0842230 MtrunA17_Chr3g0106251 29.897 291 176 8 184 463 24 297 4.75e-31 122
Msa0842230 MtrunA17_Chr8g0370941 28.641 412 223 15 96 459 100 488 8.71e-31 124
Msa0842230 MtrunA17_Chr6g0482061 30.855 269 159 9 198 447 207 467 1.39e-30 123
Msa0842230 MtrunA17_Chr7g0241801 26.247 461 256 17 5 451 9 399 2.77e-30 122
Msa0842230 MtrunA17_Chr7g0243611 33.929 224 137 7 185 401 52 271 4.14e-30 119
Msa0842230 MtrunA17_Chr5g0431431 32.114 246 142 7 156 396 99 324 5.79e-29 117
Msa0842230 MtrunA17_Chr7g0243911 34.171 199 112 5 263 442 15 213 3.26e-28 111
Msa0842230 MtrunA17_Chr5g0416821 29.588 267 175 8 205 461 212 475 6.64e-28 115
Msa0842230 MtrunA17_Chr8g0361411 26.033 484 287 19 5 457 8 451 6.80e-28 115
Msa0842230 MtrunA17_Chr7g0243811 34.021 194 116 5 211 399 187 373 2.69e-27 112
Msa0842230 MtrunA17_Chr5g0409591 30.337 267 139 9 214 436 212 475 2.69e-27 114
Msa0842230 MtrunA17_Chr8g0357361 43.478 138 76 2 269 405 117 253 1.40e-26 108
Msa0842230 MtrunA17_Chr3g0079711 35.326 184 97 6 296 457 3 186 3.12e-25 102
Msa0842230 MtrunA17_Chr7g0232351 28.040 403 237 17 2 378 3 378 1.04e-24 105
Msa0842230 MtrunA17_Chr4g0069611 24.634 410 258 12 5 395 15 392 1.42e-24 105
Msa0842230 MtrunA17_Chr6g0464091 27.295 403 263 13 5 395 18 402 1.43e-24 106
Msa0842230 MtrunA17_Chr7g0231631 31.102 254 164 7 216 461 11 261 3.13e-24 101
Msa0842230 MtrunA17_Chr8g0337381 40.157 127 71 2 339 461 2 127 1.02e-23 96.3
Msa0842230 MtrunA17_Chr6g0466831 24.276 449 304 14 5 439 18 444 1.39e-23 103
Msa0842230 MtrunA17_Chr4g0066141 38.608 158 80 4 321 461 196 353 1.52e-23 101
Msa0842230 MtrunA17_Chr8g0336321 24.818 411 271 10 2 393 4 395 1.64e-23 102
Msa0842230 MtrunA17_Chr8g0367221 41.406 128 71 2 272 395 271 398 7.90e-23 102
Msa0842230 MtrunA17_Chr8g0367221 34.857 175 105 5 272 437 1548 1722 1.27e-22 101
Msa0842230 MtrunA17_Chr8g0367221 36.932 176 100 6 272 437 1058 1232 2.71e-22 100
Msa0842230 MtrunA17_Chr8g0336251 24.088 411 274 10 2 393 4 395 8.49e-23 100
Msa0842230 MtrunA17_Chr2g0278741 25.495 404 267 14 5 395 97 479 3.32e-22 99.4
Msa0842230 MtrunA17_Chr2g0278721 26.368 402 266 14 5 395 15 397 4.72e-22 99.8
Msa0842230 MtrunA17_Chr2g0278721 25.221 452 302 17 5 435 517 953 1.47e-21 98.2
Msa0842230 MtrunA17_Chr6g0454111 33.333 141 92 2 173 312 44 183 1.02e-21 92.4
Msa0842230 MtrunA17_Chr6g0466841 24.304 395 278 10 5 395 18 395 1.42e-21 97.1
Msa0842230 MtrunA17_Chr1g0196851 23.385 449 296 16 5 433 49 469 1.44e-21 97.4
Msa0842230 MtrunA17_Chr5g0427571 38.400 125 74 2 272 393 105 229 2.06e-21 94.4
Msa0842230 MtrunA17_Chr4g0039881 24.619 394 258 13 15 395 2 369 9.41e-21 94.4
Msa0842230 MtrunA17_Chr3g0092031 37.302 126 77 2 271 395 5 129 1.18e-20 89.7
Msa0842230 MtrunA17_Chr1g0207881 32.680 153 96 2 315 460 233 385 2.39e-20 92.8
Msa0842230 MtrunA17_Chr7g0250021 26.744 344 211 13 5 335 12 327 1.49e-19 89.4
Msa0842230 MtrunA17_Chr2g0302851 23.821 424 244 15 5 395 16 393 1.71e-19 90.9
Msa0842230 MtrunA17_Chr4g0040691 25.828 453 274 18 5 430 8 425 2.45e-19 90.5
Msa0842230 MtrunA17_Chr5g0426411 34.337 166 99 4 4 162 11 173 1.25e-18 83.2
Msa0842230 MtrunA17_Chr8g0334841 34.591 159 87 5 175 329 3 148 3.35e-18 82.0
Msa0842230 MtrunA17_Chr4g0040711 24.439 446 289 17 5 430 8 425 1.10e-17 85.1
Msa0842230 MtrunA17_Chr4g0029131 23.448 435 267 17 5 414 12 405 1.88e-17 85.1
Msa0842230 MtrunA17_Chr4g0029151 23.404 423 282 15 5 414 20 413 7.92e-17 82.8
Msa0842230 MtrunA17_Chr8g0336271 24.691 243 167 5 5 235 10 248 1.80e-15 76.6
Msa0842230 MtrunA17_Chr2g0283041 30.303 165 105 4 270 425 256 419 3.16e-15 77.8
Msa0842230 MtrunA17_Chr6g0454391 44.444 63 35 0 355 417 13 75 8.18e-14 68.2
Msa0842230 MtrunA17_Chr6g0454281 28.358 201 123 8 4 186 9 206 1.08e-13 70.1
Msa0842230 MtrunA17_Chr3g0118741 55.769 52 22 1 2 52 3 54 1.50e-12 62.8
Msa0842230 MtrunA17_Chr7g0243731 41.429 70 41 0 334 403 4 73 7.75e-12 61.2
Msa0842230 MtrunA17_Chr5g0427561 34.091 88 49 3 377 459 1 84 8.22e-12 61.2
Msa0842230 MtrunA17_Chr2g0319801 31.034 145 94 4 265 404 252 395 2.79e-11 65.5
Msa0842230 MtrunA17_Chr6g0469961 31.373 153 84 7 169 312 24 164 2.86e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0842230 AT1G22380.1 36.232 483 271 10 2 459 10 480 1.10e-99 307
Msa0842230 AT1G22400.1 33.888 481 280 10 2 456 10 478 2.24e-94 294
Msa0842230 AT1G22360.1 35.124 484 269 11 5 459 10 477 1.58e-91 286
Msa0842230 AT1G22370.2 36.117 479 272 11 2 459 10 475 1.88e-90 283
Msa0842230 AT1G22360.2 35.404 483 257 13 5 459 10 465 4.33e-89 280
Msa0842230 AT1G22340.1 35.565 478 282 12 2 459 10 481 6.36e-89 280
Msa0842230 AT1G78270.1 34.656 479 284 12 2 459 10 480 1.53e-86 273
Msa0842230 AT3G11340.1 35.307 473 267 14 1 461 1 446 2.45e-78 251
Msa0842230 AT3G55710.1 33.053 475 278 14 6 464 9 459 5.29e-72 235
Msa0842230 AT5G05880.1 33.192 473 270 13 5 461 8 450 5.98e-71 232
Msa0842230 AT3G55700.1 32.704 477 275 13 5 464 8 455 3.09e-70 230
Msa0842230 AT5G05900.1 33.122 474 264 14 5 459 8 447 3.43e-70 230
Msa0842230 AT5G05860.1 32.766 470 270 12 5 459 9 447 1.95e-68 225
Msa0842230 AT5G05890.1 32.091 483 266 15 5 461 8 454 1.42e-67 223
Msa0842230 AT3G46660.1 32.766 470 275 14 6 461 15 457 1.82e-67 223
Msa0842230 AT3G46670.1 32.068 474 273 16 5 461 9 450 2.73e-67 222
Msa0842230 AT3G46680.1 30.932 472 278 13 2 456 6 446 1.53e-63 213
Msa0842230 AT5G59580.1 30.802 474 276 16 5 460 9 448 5.33e-63 211
Msa0842230 AT5G38010.1 31.557 469 282 13 5 459 10 453 5.44e-63 211
Msa0842230 AT5G59590.1 31.356 472 269 15 5 456 10 446 4.06e-62 209
Msa0842230 AT5G05870.1 30.947 475 280 14 5 459 8 454 1.20e-61 208
Msa0842230 AT1G22370.1 38.816 304 177 7 163 459 4 305 4.35e-61 202
Msa0842230 AT3G46700.1 31.092 476 279 15 1 461 5 446 4.69e-61 206
Msa0842230 AT3G02100.1 31.158 475 291 15 1 461 9 461 1.18e-59 202
Msa0842230 AT3G46720.1 31.303 476 272 18 2 461 6 442 2.38e-59 201
Msa0842230 AT5G38040.1 31.887 461 267 15 13 457 18 447 2.69e-59 201
Msa0842230 AT4G15480.1 29.851 469 302 10 5 457 19 476 7.77e-59 201
Msa0842230 AT3G46690.1 31.381 478 280 15 1 461 5 451 1.21e-58 199
Msa0842230 AT2G43820.1 30.498 482 270 17 5 461 7 448 1.22e-58 199
Msa0842230 AT3G46650.1 28.785 469 274 13 5 459 10 432 1.71e-57 196
Msa0842230 AT2G43840.2 29.512 471 287 14 5 460 7 447 3.94e-57 196
Msa0842230 AT2G43840.1 29.958 474 281 16 5 460 7 447 4.16e-57 196
Msa0842230 AT3G21560.1 29.684 475 298 15 4 457 11 470 8.21e-56 193
Msa0842230 AT2G26480.1 28.387 465 296 12 5 459 8 445 2.59e-55 191
Msa0842230 AT2G23260.1 31.635 471 279 19 5 459 10 453 2.83e-54 188
Msa0842230 AT4G15490.1 29.079 478 291 16 5 456 8 463 8.44e-53 185
Msa0842230 AT2G28080.1 29.103 457 280 15 10 443 23 458 8.78e-53 185
Msa0842230 AT2G36970.1 28.750 480 304 13 4 461 9 472 1.77e-52 184
Msa0842230 AT4G15500.1 28.602 472 298 12 4 456 8 459 3.38e-52 183
Msa0842230 AT2G23250.1 31.818 462 272 17 14 462 7 438 1.05e-51 181
Msa0842230 AT1G05675.1 31.070 486 265 16 2 456 3 449 1.10e-51 181
Msa0842230 AT5G17050.1 31.667 360 226 9 104 459 113 456 2.28e-51 181
Msa0842230 AT5G17040.1 27.975 479 285 16 1 459 1 439 7.17e-51 179
Msa0842230 AT1G05680.1 29.796 490 266 15 2 456 3 449 3.30e-50 177
Msa0842230 AT2G31750.1 28.419 468 301 15 5 459 8 454 5.36e-50 177
Msa0842230 AT2G31750.2 28.419 468 301 15 5 459 8 454 1.43e-49 176
Msa0842230 AT5G17040.2 32.673 303 184 8 163 459 49 337 4.36e-49 171
Msa0842230 AT2G31790.1 26.923 468 304 15 5 456 8 453 1.06e-48 173
Msa0842230 AT2G15480.1 28.283 495 293 17 2 457 7 478 3.14e-48 172
Msa0842230 AT2G15480.2 27.921 505 292 17 2 457 7 488 3.15e-47 170
Msa0842230 AT5G26310.1 30.488 492 262 22 4 452 6 460 3.82e-47 169
Msa0842230 AT2G36770.1 28.600 493 304 16 5 461 14 494 6.73e-47 169
Msa0842230 AT4G15550.1 27.000 500 277 17 4 456 12 470 8.18e-47 169
Msa0842230 AT2G15490.3 30.629 493 284 18 2 457 4 475 1.63e-46 168
Msa0842230 AT2G36780.1 28.306 484 309 13 5 459 14 488 3.59e-46 167
Msa0842230 AT3G16520.3 28.330 473 297 16 6 457 6 457 5.34e-46 166
Msa0842230 AT2G15490.1 30.444 496 284 18 2 457 4 478 6.06e-46 166
Msa0842230 AT2G36760.1 30.321 498 293 19 5 463 14 496 2.01e-45 165
Msa0842230 AT5G17030.1 29.363 361 236 8 104 459 109 455 2.16e-45 164
Msa0842230 AT1G30530.1 30.854 363 229 9 101 459 106 450 3.32e-45 164
Msa0842230 AT4G34138.1 28.106 491 290 15 5 457 11 476 4.00e-45 164
Msa0842230 AT1G24100.1 28.838 482 282 18 5 459 11 458 9.89e-45 162
Msa0842230 AT1G05530.1 27.600 500 275 18 1 459 1 454 1.34e-44 162
Msa0842230 AT2G36800.1 28.169 497 294 18 5 459 12 487 1.67e-44 163
Msa0842230 AT1G01420.2 30.042 476 262 19 3 442 9 449 1.73e-44 162
Msa0842230 AT1G01420.1 30.042 476 262 19 3 442 6 446 1.79e-44 162
Msa0842230 AT1G05560.1 28.571 504 262 22 1 459 1 451 2.13e-44 162
Msa0842230 AT1G05560.2 28.571 504 262 22 1 459 51 501 2.27e-44 163
Msa0842230 AT4G01070.1 28.423 482 288 15 2 452 5 460 3.76e-44 161
Msa0842230 AT4G34131.1 26.829 492 305 17 5 461 10 481 6.30e-44 161
Msa0842230 AT3G16520.2 28.899 436 270 15 6 420 6 422 8.67e-44 160
Msa0842230 AT3G16520.1 28.899 436 270 15 6 420 6 422 1.85e-43 159
Msa0842230 AT5G66690.1 29.508 488 262 20 4 448 6 454 2.86e-43 159
Msa0842230 AT2G36750.1 29.259 499 284 19 5 459 10 483 6.15e-43 158
Msa0842230 AT3G53160.1 34.028 288 134 8 214 463 217 486 1.39e-42 157
Msa0842230 AT4G34135.1 28.112 498 292 13 5 461 11 483 3.07e-42 156
Msa0842230 AT3G22250.1 26.457 446 287 16 2 424 5 432 7.45e-42 155
Msa0842230 AT5G03490.1 28.221 489 274 20 2 457 16 460 1.32e-41 154
Msa0842230 AT2G36790.1 29.032 496 290 19 5 459 13 487 3.16e-41 154
Msa0842230 AT1G01390.1 30.679 427 228 17 3 395 6 398 9.53e-41 152
Msa0842230 AT2G29710.1 25.605 496 308 13 1 464 1 467 9.74e-41 152
Msa0842230 AT1G01390.2 30.679 427 228 17 3 395 23 415 1.37e-40 152
Msa0842230 AT3G50740.1 29.435 496 257 22 4 447 6 460 1.01e-39 149
Msa0842230 AT2G30140.1 27.754 472 299 16 5 463 13 455 3.54e-39 147
Msa0842230 AT2G30140.2 27.754 472 298 16 5 463 13 454 5.48e-39 147
Msa0842230 AT1G73880.1 26.804 485 297 17 5 461 14 468 1.53e-38 146
Msa0842230 AT2G29730.1 25.051 487 306 16 1 456 1 459 8.11e-38 144
Msa0842230 AT3G21790.1 26.316 494 303 17 7 459 5 478 1.20e-37 144
Msa0842230 AT1G07250.1 27.651 481 283 20 7 448 7 461 4.11e-37 142
Msa0842230 AT4G14090.1 27.708 480 281 18 4 456 12 452 8.52e-37 141
Msa0842230 AT2G29740.1 26.804 485 298 17 7 456 9 471 6.14e-36 139
Msa0842230 AT4G15260.1 31.618 272 151 7 211 457 91 352 7.49e-35 133
Msa0842230 AT2G29750.1 25.567 485 312 15 2 456 5 470 1.31e-34 135
Msa0842230 AT4G36770.1 27.601 471 282 18 5 443 4 447 3.60e-34 134
Msa0842230 AT1G51210.1 27.212 452 272 17 4 435 19 433 3.82e-34 133
Msa0842230 AT4G15280.1 26.908 498 289 21 5 457 4 471 4.32e-34 134
Msa0842230 AT3G21780.1 25.051 487 307 16 5 457 4 466 5.54e-34 133
Msa0842230 AT4G15280.2 26.908 498 289 21 5 457 36 503 9.52e-34 133
Msa0842230 AT3G21800.1 29.384 422 255 17 6 404 5 406 1.04e-33 132
Msa0842230 AT5G14860.1 27.668 506 273 24 5 457 8 473 1.07e-33 133
Msa0842230 AT1G07240.1 32.331 266 156 8 211 459 217 475 2.26e-33 132
Msa0842230 AT3G21760.1 25.051 491 314 13 5 457 4 478 5.15e-33 130
Msa0842230 AT2G18570.1 33.086 269 136 9 213 452 206 459 5.93e-33 130
Msa0842230 AT1G07260.1 34.335 233 133 7 236 456 244 468 8.49e-33 130
Msa0842230 AT5G37950.2 31.769 277 165 7 106 378 81 337 1.86e-32 126
Msa0842230 AT1G10400.1 26.423 492 291 18 1 456 3 459 2.23e-32 129
Msa0842230 AT2G30150.2 25.690 471 303 17 5 459 13 452 4.13e-32 128
Msa0842230 AT5G37950.1 31.541 279 169 9 106 378 81 343 1.69e-31 124
Msa0842230 AT3G21750.1 25.153 489 304 14 5 457 4 466 5.28e-31 125
Msa0842230 AT2G30150.1 25.536 466 300 17 10 459 2 436 1.03e-30 124
Msa0842230 AT2G18560.1 31.970 269 139 10 213 452 116 369 4.42e-30 120
Msa0842230 AT3G53150.1 30.851 282 156 10 214 459 231 509 1.15e-29 121
Msa0842230 AT5G12890.1 38.947 190 95 8 213 390 224 404 1.12e-28 118
Msa0842230 AT2G16890.2 24.481 482 310 18 5 457 9 465 2.44e-27 114
Msa0842230 AT5G49690.1 25.895 475 298 17 2 459 7 444 1.59e-26 112
Msa0842230 AT1G06000.1 31.679 262 152 10 214 456 177 430 2.09e-26 111
Msa0842230 AT2G16890.3 25.238 420 269 15 5 404 9 403 3.69e-25 107
Msa0842230 AT5G65550.1 24.578 415 274 11 5 403 9 400 1.71e-23 103
Msa0842230 AT4G01070.2 26.606 327 202 9 2 316 5 305 6.09e-19 88.6
Msa0842230 AT5G54010.1 24.524 420 257 15 5 404 6 385 1.19e-18 88.6
Msa0842230 AT2G22590.1 39.062 128 74 2 272 395 274 401 1.94e-17 85.1
Msa0842230 AT4G27560.1 21.687 415 272 15 5 403 7 384 3.07e-15 78.2
Msa0842230 AT4G34135.2 24.633 341 203 10 5 316 11 326 3.46e-15 77.0
Msa0842230 AT5G53990.1 31.884 138 87 3 272 404 244 379 3.66e-14 74.7
Msa0842230 AT4G27570.1 20.773 414 277 13 5 403 7 384 1.12e-13 73.2
Msa0842230 AT1G64910.1 30.147 136 92 3 272 404 244 379 1.84e-13 72.8
Msa0842230 AT3G29630.1 23.206 418 261 14 5 404 6 381 1.54e-12 69.7
Msa0842230 AT5G54060.1 21.675 406 276 11 6 394 14 394 8.04e-11 64.3
Msa0842230 AT4G09500.2 24.088 411 262 15 5 403 6 378 8.32e-11 64.3

Find 103 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATACTGAATCAAATTT+TGG 0.160775 5_4:+19224824 None:intergenic
TGGGGACTTGAAGACGAATT+TGG 0.196816 5_4:+19225493 None:intergenic
AGACTTACCATACATATTTA+TGG 0.205612 5_4:+19226647 None:intergenic
GTCTACTAGCTCATAAAATA+TGG 0.218893 5_4:-19224800 Msa0842230:exon
TGCTATTGAAATGGCGGATT+TGG 0.219461 5_4:-19224890 Msa0842230:CDS
ACTGATTTGGCTCATGAGTT+TGG 0.265323 5_4:-19226552 Msa0842230:CDS
ATTATATAATATACCTCTAA+TGG 0.273452 5_4:+19226440 None:intergenic
ATTTGTTGATCAGCAAAATA+AGG 0.280250 5_4:+19225039 None:intergenic
GTGAGTGAGGTTTGGAAGCT+TGG 0.307721 5_4:-19225003 Msa0842230:CDS
AAGGAAAAGCATCCTGGATT+TGG 0.312405 5_4:-19226696 Msa0842230:CDS
GACGAATTTGGGAGAGAATT+GGG 0.312540 5_4:+19225505 None:intergenic
CCAAACATGGTACAAGAAAA+AGG 0.313624 5_4:-19225231 Msa0842230:CDS
AAAATTTGATTCAGTATATA+AGG 0.317414 5_4:-19224822 Msa0842230:CDS
GAGAAGAAATACTTGAGATT+TGG 0.328817 5_4:-19225299 Msa0842230:CDS
CTGATTTGGCTCATGAGTTT+GGG 0.337441 5_4:-19226551 Msa0842230:CDS
AGACGAATTTGGGAGAGAAT+TGG 0.347001 5_4:+19225504 None:intergenic
GGGGACTTGAAGACGAATTT+GGG 0.347598 5_4:+19225494 None:intergenic
CTGATCAACAAATTAATAGT+AGG 0.360356 5_4:-19225029 Msa0842230:CDS
CCACCCACTATGTGTCAAAA+AGG 0.361214 5_4:+19225110 None:intergenic
GGGCCAATAGTGTAGAGTTT+GGG 0.371521 5_4:+19225474 None:intergenic
AAACTTTATCTAAAACGATA+TGG 0.371646 5_4:+19225595 None:intergenic
CTTTGGAGAGTGTGGTTTGT+GGG 0.379040 5_4:-19225080 Msa0842230:CDS
TGTGGATGTACTCAGTGTTT+AGG 0.381263 5_4:+19226808 None:intergenic
TTTCTGTATGCCCAAGCTCT+TGG 0.383561 5_4:-19226478 Msa0842230:CDS
TAGGAATGTTGTTGAGAAAA+TGG 0.389004 5_4:-19224956 Msa0842230:CDS
ACATATACAACTGAATTTGA+TGG 0.389866 5_4:+19225351 None:intergenic
TTCAAGATCTGCTATTGAAA+TGG 0.395191 5_4:-19224899 Msa0842230:CDS
CAAAATAAGGAAAAGCATCC+TGG 0.395550 5_4:-19226702 Msa0842230:CDS
TGGTGACCTTGCTACTGATT+TGG 0.401952 5_4:-19226565 Msa0842230:CDS
CTGTTGGTGCTTGTGCCGTC+TGG 0.405592 5_4:-19226506 Msa0842230:CDS
TCTACTAGCTCATAAAATAT+GGG 0.406323 5_4:-19224799 Msa0842230:exon
GTCCCCAAACTCTACACTAT+TGG 0.413746 5_4:-19225477 Msa0842230:CDS
TGGTATTGAGGTGGTGGTGA+AGG 0.419041 5_4:+19225451 None:intergenic
CTCATTGCACTCCAAGAGCT+TGG 0.419151 5_4:+19226467 None:intergenic
GTAGGTTTGTGAGTGAGGTT+TGG 0.420544 5_4:-19225011 Msa0842230:CDS
TGCAATGAGCTTCCCATTAG+AGG 0.422593 5_4:-19226453 Msa0842230:intron
GGGGCCAATAGTGTAGAGTT+TGG 0.424125 5_4:+19225473 None:intergenic
ATGGTCTTGAATTGAAGCTT+AGG 0.425350 5_4:+19226735 None:intergenic
GGTATTGAGGTGGTGGTGAA+GGG 0.438171 5_4:+19225452 None:intergenic
TCAGTTGTATATGTCAGCTT+TGG 0.452031 5_4:-19225342 Msa0842230:CDS
GAAAGGGATGATTGTGGGGT+GGG 0.454518 5_4:-19225172 Msa0842230:CDS
AAATAAGGCCAACATATCAT+AGG 0.459700 5_4:+19225054 None:intergenic
TTGTTGTAGGAGGAACCATT+AGG 0.462958 5_4:+19224850 None:intergenic
TCCAAGAGTGTAAGTCCTAA+TGG 0.463911 5_4:-19224865 Msa0842230:CDS
GCTTGAGCATTGAGTTTACA+TGG 0.467346 5_4:+19226871 None:intergenic
CATTGACTTTAAGCGATGGT+TGG 0.467666 5_4:+19225562 None:intergenic
TTATATAATATACCTCTAAT+GGG 0.468088 5_4:+19226441 None:intergenic
AAAGAGAAAGGGATGATTGT+GGG 0.472351 5_4:-19225177 Msa0842230:CDS
TAATAGTAGGTTTGTGAGTG+AGG 0.474155 5_4:-19225016 Msa0842230:CDS
TGAGGTTTGGAAGCTTGGAT+TGG 0.475109 5_4:-19224998 Msa0842230:CDS
ATTGACTTTAAGCGATGGTT+GGG 0.479707 5_4:+19225563 None:intergenic
ACTTTGGAGAGTGTGGTTTG+TGG 0.480967 5_4:-19225081 Msa0842230:CDS
ATTTCCTCCATAAATATGTA+TGG 0.483586 5_4:-19226654 Msa0842230:CDS
ACCATTAGGACTTACACTCT+TGG 0.484150 5_4:+19224864 None:intergenic
TCATTGCACTCCAAGAGCTT+GGG 0.494921 5_4:+19226468 None:intergenic
GTGGGGTGCCTATGATATGT+TGG 0.496505 5_4:-19225062 Msa0842230:CDS
GAGTTTACATGGCCTTGTGC+TGG 0.498291 5_4:+19226882 None:intergenic
CAACTGCAATTTCTTCAAAG+TGG 0.498490 5_4:-19225406 Msa0842230:CDS
GAAGGGACTACTAAAGAGAA+AGG 0.498754 5_4:-19225189 Msa0842230:CDS
TCAAACTAATGAGTCGGTTG+TGG 0.503008 5_4:+19226790 None:intergenic
ATGTCTATAAACATCACTGT+TGG 0.507819 5_4:-19224734 Msa0842230:three_prime_UTR
TGGTCTTGAATTGAAGCTTA+GGG 0.509318 5_4:+19226736 None:intergenic
ACATGGCCTTGTGCTGGACA+TGG 0.511830 5_4:+19226888 None:intergenic
CGCATCATAAGAAACGTGTC+AGG 0.513812 5_4:-19225678 Msa0842230:CDS
ATATGAAAGATGTTTGTGAT+AGG 0.519622 5_4:-19224975 Msa0842230:CDS
GAAATACTTGAGATTTGGCA+TGG 0.537768 5_4:-19225294 Msa0842230:CDS
AGAATCGAGCCATGTCATGC+AGG 0.539051 5_4:+19225377 None:intergenic
ACGAATTTGGGAGAGAATTG+GGG 0.540729 5_4:+19225506 None:intergenic
TGTAGAGATCTACCACGTTT+CGG 0.543625 5_4:-19225636 Msa0842230:CDS
TAGTGGGTGGAACTCTACTT+TGG 0.543912 5_4:-19225097 Msa0842230:CDS
GAACTCTACTTTGGAGAGTG+TGG 0.546332 5_4:-19225088 Msa0842230:CDS
TGTGACAAAACTTCCTCTTG+TGG 0.551208 5_4:+19225147 None:intergenic
TGATATTATGATGAACAAGA+AGG 0.557986 5_4:-19224929 Msa0842230:CDS
CTATTGAAGGAGCTTGAGGA+AGG 0.558458 5_4:-19225207 Msa0842230:CDS
AAGATCTGCTATTGAAATGG+CGG 0.566824 5_4:-19224896 Msa0842230:CDS
CATAAGAAACGTGTCAGGCA+TGG 0.566961 5_4:-19225673 Msa0842230:CDS
TAAAGAGAAAGGGATGATTG+TGG 0.571564 5_4:-19225178 Msa0842230:CDS
AGGACTATTGAAGGAGCTTG+AGG 0.572112 5_4:-19225211 Msa0842230:CDS
AGAAAGGGATGATTGTGGGG+TGG 0.586735 5_4:-19225173 Msa0842230:CDS
GTGGGTGATTAGGCCAAACA+TGG 0.589150 5_4:-19225244 Msa0842230:CDS
CATGGCCTTGTGCTGGACAT+GGG 0.589394 5_4:+19226889 None:intergenic
TGGATAAAACCTGCATGACA+TGG 0.590971 5_4:-19225386 Msa0842230:CDS
TGTGGGGTGGGTTCCACAAG+AGG 0.592500 5_4:-19225160 Msa0842230:CDS
AAGGGACTACTAAAGAGAAA+GGG 0.595105 5_4:-19225188 Msa0842230:CDS
TTTGGAGAGTGTGGTTTGTG+GGG 0.597067 5_4:-19225079 Msa0842230:CDS
CATCATTCAAACTAATGAGT+CGG 0.601772 5_4:+19226784 None:intergenic
GTATTGAGGTGGTGGTGAAG+GGG 0.602296 5_4:+19225453 None:intergenic
ATCTTCCCATGTCCAGCACA+AGG 0.602792 5_4:-19226894 Msa0842230:CDS
AAGAGAAAGGGATGATTGTG+GGG 0.603887 5_4:-19225176 Msa0842230:CDS
TATTGAGGTGGTGGTGAAGG+GGG 0.607014 5_4:+19225454 None:intergenic
GGCCAATAGTGTAGAGTTTG+GGG 0.607205 5_4:+19225475 None:intergenic
ATTTATAGGAGACAAGGACA+TGG 0.607396 5_4:-19225703 Msa0842230:intron
CTACTAGCTCATAAAATATG+GGG 0.613134 5_4:-19224798 Msa0842230:exon
TATTGAAGGAGCTTGAGGAA+GGG 0.618899 5_4:-19225206 Msa0842230:CDS
TGTTTAATTTATAGGAGACA+AGG 0.619236 5_4:-19225709 Msa0842230:intron
AATGCATTGACTTTAAGCGA+TGG 0.630231 5_4:+19225558 None:intergenic
TATTATGATGAACAAGAAGG+AGG 0.632410 5_4:-19224926 Msa0842230:CDS
CTTACCATACATATTTATGG+AGG 0.634543 5_4:+19226650 None:intergenic
CATGAGCCAAATCAGTAGCA+AGG 0.637420 5_4:+19226559 None:intergenic
TTGTTTGTTGTACCGAAACG+TGG 0.638132 5_4:+19225624 None:intergenic
CATCACTGTTGGAACATGTG+TGG 0.640196 5_4:-19224723 Msa0842230:three_prime_UTR
TTTCGGTACAACAAACAAAG+AGG 0.658970 5_4:-19225619 Msa0842230:CDS
CATGGGAAGATTAACACATG+TGG 0.740669 5_4:+19226906 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTTATAAATAAGAT+CGG + chr5_4:19225248-19225267 None:intergenic 10.0%
!! ATAATTAAATCAAGAAATTA+GGG + chr5_4:19225440-19225459 None:intergenic 10.0%
!! AATAATTAAATCAAGAAATT+AGG + chr5_4:19225441-19225460 None:intergenic 10.0%
!!! TTTTCTTTTATAAATAAGAT+CGG + chr5_4:19225248-19225267 None:intergenic 10.0%
!! ATAATTAAATCAAGAAATTA+GGG + chr5_4:19225440-19225459 None:intergenic 10.0%
!! AATAATTAAATCAAGAAATT+AGG + chr5_4:19225441-19225460 None:intergenic 10.0%
!! TTATATAATATACCTCTAAT+GGG + chr5_4:19225217-19225236 None:intergenic 15.0%
!! ATTATATAATATACCTCTAA+TGG + chr5_4:19225218-19225237 None:intergenic 15.0%
!! TATATTTGTAAAAGACATTT+AGG + chr5_4:19225335-19225354 None:intergenic 15.0%
!! TAATTAAATCAAGAAATTAG+GGG + chr5_4:19225439-19225458 None:intergenic 15.0%
!! AGATAAGTTTAAATAAAATG+AGG + chr5_4:19225587-19225606 None:intergenic 15.0%
!! TAAGTAAAAAGAAAAAAGAT+AGG + chr5_4:19225812-19225831 None:intergenic 15.0%
!!! TTTTTTTTTTAATGGTATTG+AGG + chr5_4:19226219-19226238 None:intergenic 15.0%
!!! AGATGATGTTTTTTTTTTAA+TGG + chr5_4:19226227-19226246 None:intergenic 15.0%
!!! TTATATACTGAATCAAATTT+TGG + chr5_4:19226834-19226853 None:intergenic 15.0%
!! AAAATTTGATTCAGTATATA+AGG - chr5_4:19226833-19226852 Msa0842230:CDS 15.0%
!! TTATATAATATACCTCTAAT+GGG + chr5_4:19225217-19225236 None:intergenic 15.0%
!! ATTATATAATATACCTCTAA+TGG + chr5_4:19225218-19225237 None:intergenic 15.0%
!! TATATTTGTAAAAGACATTT+AGG + chr5_4:19225335-19225354 None:intergenic 15.0%
!! TAATTAAATCAAGAAATTAG+GGG + chr5_4:19225439-19225458 None:intergenic 15.0%
!! AGATAAGTTTAAATAAAATG+AGG + chr5_4:19225587-19225606 None:intergenic 15.0%
!! TAAGTAAAAAGAAAAAAGAT+AGG + chr5_4:19225812-19225831 None:intergenic 15.0%
!!! TTTTTTTTTTAATGGTATTG+AGG + chr5_4:19226219-19226238 None:intergenic 15.0%
!!! AGATGATGTTTTTTTTTTAA+TGG + chr5_4:19226227-19226246 None:intergenic 15.0%
!!! TTATATACTGAATCAAATTT+TGG + chr5_4:19226834-19226853 None:intergenic 15.0%
!! AAAATTTGATTCAGTATATA+AGG - chr5_4:19226833-19226852 Msa0842230:CDS 15.0%
!! AAATTGAGATTGTTGAAAAA+TGG - chr5_4:19224721-19224740 Msa0842230:three_prime_UTR 20.0%
!!! CTTTTACAAATATAAACGAA+AGG - chr5_4:19225341-19225360 Msa0842230:CDS 20.0%
!! TTATTGGATAAAACTTATGT+GGG + chr5_4:19225732-19225751 None:intergenic 20.0%
!! TTTATTGGATAAAACTTATG+TGG + chr5_4:19225733-19225752 None:intergenic 20.0%
!!! TAGTAGATAAGTTTTTTTGA+AGG + chr5_4:19225856-19225875 None:intergenic 20.0%
!!! AAACTTTATCTAAAACGATA+TGG + chr5_4:19226063-19226082 None:intergenic 20.0%
!!! TTTTTAGTAGGATAATTGTA+GGG + chr5_4:19226887-19226906 None:intergenic 20.0%
!!! AAATATGAGTAGTTTTTAGT+AGG + chr5_4:19226899-19226918 None:intergenic 20.0%
!! AAATTGAGATTGTTGAAAAA+TGG - chr5_4:19224721-19224740 Msa0842230:three_prime_UTR 20.0%
!!! CTTTTACAAATATAAACGAA+AGG - chr5_4:19225341-19225360 Msa0842230:CDS 20.0%
!! TTATTGGATAAAACTTATGT+GGG + chr5_4:19225732-19225751 None:intergenic 20.0%
!! TTTATTGGATAAAACTTATG+TGG + chr5_4:19225733-19225752 None:intergenic 20.0%
!!! TAGTAGATAAGTTTTTTTGA+AGG + chr5_4:19225856-19225875 None:intergenic 20.0%
!!! AAACTTTATCTAAAACGATA+TGG + chr5_4:19226063-19226082 None:intergenic 20.0%
!!! TTTTTAGTAGGATAATTGTA+GGG + chr5_4:19226887-19226906 None:intergenic 20.0%
!!! AAATATGAGTAGTTTTTAGT+AGG + chr5_4:19226899-19226918 None:intergenic 20.0%
!!! CTTATTTTGAAAATCAGAGA+TGG + chr5_4:19224942-19224961 None:intergenic 25.0%
!! CATCTCTGATTTTCAAAATA+AGG - chr5_4:19224940-19224959 Msa0842230:CDS 25.0%
! ATTTCCTCCATAAATATGTA+TGG - chr5_4:19225001-19225020 Msa0842230:CDS 25.0%
! AGACTTACCATACATATTTA+TGG + chr5_4:19225011-19225030 None:intergenic 25.0%
!!! GTAAGTTGCATTATTTTAGA+TGG - chr5_4:19225061-19225080 Msa0842230:CDS 25.0%
!!! ATTATTTTAGATGGAGGTTT+TGG - chr5_4:19225070-19225089 Msa0842230:CDS 25.0%
!! CTTTTATAAATAAGATCGGA+TGG + chr5_4:19225244-19225263 None:intergenic 25.0%
! ATTATACATATGCAAATGCA+AGG - chr5_4:19225458-19225477 Msa0842230:CDS 25.0%
!!! TATCTTTGATTTTACGAGAA+AGG - chr5_4:19225602-19225621 Msa0842230:CDS 25.0%
! TTTAATACTCACTCTCTTAT+CGG - chr5_4:19225652-19225671 Msa0842230:CDS 25.0%
!! TCTCAAACACATTCTTTTAT+TGG + chr5_4:19225748-19225767 None:intergenic 25.0%
!! GTTCTCGTTGTTTAATTTAT+AGG - chr5_4:19225938-19225957 Msa0842230:intron 25.0%
!! TGTTTAATTTATAGGAGACA+AGG - chr5_4:19225946-19225965 Msa0842230:intron 25.0%
!!! TTTTTTTAATGGTATTGAGG+TGG + chr5_4:19226216-19226235 None:intergenic 25.0%
! ACATATACAACTGAATTTGA+TGG + chr5_4:19226307-19226326 None:intergenic 25.0%
!! ATAGCAAAAAACGATTTTTG+TGG - chr5_4:19226392-19226411 Msa0842230:intron 25.0%
!! TAGCAAAAAACGATTTTTGT+GGG - chr5_4:19226393-19226412 Msa0842230:intron 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG + chr5_4:19226619-19226638 None:intergenic 25.0%
! CTGATCAACAAATTAATAGT+AGG - chr5_4:19226626-19226645 Msa0842230:CDS 25.0%
! ATATGAAAGATGTTTGTGAT+AGG - chr5_4:19226680-19226699 Msa0842230:CDS 25.0%
! TGATATTATGATGAACAAGA+AGG - chr5_4:19226726-19226745 Msa0842230:CDS 25.0%
!! TATACTGAATCAAATTTTGG+AGG + chr5_4:19226831-19226850 None:intergenic 25.0%
! TCTACTAGCTCATAAAATAT+GGG - chr5_4:19226856-19226875 Msa0842230:CDS 25.0%
!! TTTTAGTAGGATAATTGTAG+GGG + chr5_4:19226886-19226905 None:intergenic 25.0%
!!! GTTTTTAGTAGGATAATTGT+AGG + chr5_4:19226888-19226907 None:intergenic 25.0%
!!! CTTATTTTGAAAATCAGAGA+TGG + chr5_4:19224942-19224961 None:intergenic 25.0%
!! CATCTCTGATTTTCAAAATA+AGG - chr5_4:19224940-19224959 Msa0842230:CDS 25.0%
! ATTTCCTCCATAAATATGTA+TGG - chr5_4:19225001-19225020 Msa0842230:CDS 25.0%
! AGACTTACCATACATATTTA+TGG + chr5_4:19225011-19225030 None:intergenic 25.0%
!!! GTAAGTTGCATTATTTTAGA+TGG - chr5_4:19225061-19225080 Msa0842230:CDS 25.0%
!!! ATTATTTTAGATGGAGGTTT+TGG - chr5_4:19225070-19225089 Msa0842230:CDS 25.0%
!! CTTTTATAAATAAGATCGGA+TGG + chr5_4:19225244-19225263 None:intergenic 25.0%
! ATTATACATATGCAAATGCA+AGG - chr5_4:19225458-19225477 Msa0842230:CDS 25.0%
!!! TATCTTTGATTTTACGAGAA+AGG - chr5_4:19225602-19225621 Msa0842230:CDS 25.0%
! TTTAATACTCACTCTCTTAT+CGG - chr5_4:19225652-19225671 Msa0842230:CDS 25.0%
!! TCTCAAACACATTCTTTTAT+TGG + chr5_4:19225748-19225767 None:intergenic 25.0%
!! GTTCTCGTTGTTTAATTTAT+AGG - chr5_4:19225938-19225957 Msa0842230:intron 25.0%
!! TGTTTAATTTATAGGAGACA+AGG - chr5_4:19225946-19225965 Msa0842230:intron 25.0%
!!! TTTTTTTAATGGTATTGAGG+TGG + chr5_4:19226216-19226235 None:intergenic 25.0%
! ACATATACAACTGAATTTGA+TGG + chr5_4:19226307-19226326 None:intergenic 25.0%
!! ATAGCAAAAAACGATTTTTG+TGG - chr5_4:19226392-19226411 Msa0842230:intron 25.0%
!! TAGCAAAAAACGATTTTTGT+GGG - chr5_4:19226393-19226412 Msa0842230:intron 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG + chr5_4:19226619-19226638 None:intergenic 25.0%
! CTGATCAACAAATTAATAGT+AGG - chr5_4:19226626-19226645 Msa0842230:CDS 25.0%
! ATATGAAAGATGTTTGTGAT+AGG - chr5_4:19226680-19226699 Msa0842230:CDS 25.0%
! TGATATTATGATGAACAAGA+AGG - chr5_4:19226726-19226745 Msa0842230:CDS 25.0%
!! TATACTGAATCAAATTTTGG+AGG + chr5_4:19226831-19226850 None:intergenic 25.0%
! TCTACTAGCTCATAAAATAT+GGG - chr5_4:19226856-19226875 Msa0842230:CDS 25.0%
!! TTTTAGTAGGATAATTGTAG+GGG + chr5_4:19226886-19226905 None:intergenic 25.0%
!!! GTTTTTAGTAGGATAATTGT+AGG + chr5_4:19226888-19226907 None:intergenic 25.0%
CATCATTCAAACTAATGAGT+CGG + chr5_4:19224874-19224893 None:intergenic 30.0%
CTTACCATACATATTTATGG+AGG + chr5_4:19225008-19225027 None:intergenic 30.0%
!!! AGTTGCATTATTTTAGATGG+AGG - chr5_4:19225064-19225083 Msa0842230:CDS 30.0%
! TTGATACATTTTCGTACTGT+TGG - chr5_4:19225133-19225152 Msa0842230:CDS 30.0%
TTAATACTCACTCTCTTATC+GGG - chr5_4:19225653-19225672 Msa0842230:CDS 30.0%
TTTGCATAAATATACGACCA+AGG + chr5_4:19225899-19225918 None:intergenic 30.0%
GAGAAGAAATACTTGAGATT+TGG - chr5_4:19226356-19226375 Msa0842230:intron 30.0%
ACAAGAAAAAGGACTATTGA+AGG - chr5_4:19226435-19226454 Msa0842230:intron 30.0%
AAATAAGGCCAACATATCAT+AGG + chr5_4:19226604-19226623 None:intergenic 30.0%
TAGGAATGTTGTTGAGAAAA+TGG - chr5_4:19226699-19226718 Msa0842230:CDS 30.0%
TATTATGATGAACAAGAAGG+AGG - chr5_4:19226729-19226748 Msa0842230:CDS 30.0%
TTCAAGATCTGCTATTGAAA+TGG - chr5_4:19226756-19226775 Msa0842230:CDS 30.0%
GTCTACTAGCTCATAAAATA+TGG - chr5_4:19226855-19226874 Msa0842230:CDS 30.0%
CTACTAGCTCATAAAATATG+GGG - chr5_4:19226857-19226876 Msa0842230:CDS 30.0%
ATGTCTATAAACATCACTGT+TGG - chr5_4:19226921-19226940 Msa0842230:exon 30.0%
CATCATTCAAACTAATGAGT+CGG + chr5_4:19224874-19224893 None:intergenic 30.0%
CTTACCATACATATTTATGG+AGG + chr5_4:19225008-19225027 None:intergenic 30.0%
!!! AGTTGCATTATTTTAGATGG+AGG - chr5_4:19225064-19225083 Msa0842230:CDS 30.0%
! TTGATACATTTTCGTACTGT+TGG - chr5_4:19225133-19225152 Msa0842230:CDS 30.0%
TTAATACTCACTCTCTTATC+GGG - chr5_4:19225653-19225672 Msa0842230:CDS 30.0%
TTTGCATAAATATACGACCA+AGG + chr5_4:19225899-19225918 None:intergenic 30.0%
GAGAAGAAATACTTGAGATT+TGG - chr5_4:19226356-19226375 Msa0842230:intron 30.0%
ACAAGAAAAAGGACTATTGA+AGG - chr5_4:19226435-19226454 Msa0842230:intron 30.0%
AAATAAGGCCAACATATCAT+AGG + chr5_4:19226604-19226623 None:intergenic 30.0%
TAGGAATGTTGTTGAGAAAA+TGG - chr5_4:19226699-19226718 Msa0842230:CDS 30.0%
TATTATGATGAACAAGAAGG+AGG - chr5_4:19226729-19226748 Msa0842230:CDS 30.0%
TTCAAGATCTGCTATTGAAA+TGG - chr5_4:19226756-19226775 Msa0842230:CDS 30.0%
GTCTACTAGCTCATAAAATA+TGG - chr5_4:19226855-19226874 Msa0842230:CDS 30.0%
CTACTAGCTCATAAAATATG+GGG - chr5_4:19226857-19226876 Msa0842230:CDS 30.0%
ATGTCTATAAACATCACTGT+TGG - chr5_4:19226921-19226940 Msa0842230:exon 30.0%
! TGGTCTTGAATTGAAGCTTA+GGG + chr5_4:19224922-19224941 None:intergenic 35.0%
! ATGGTCTTGAATTGAAGCTT+AGG + chr5_4:19224923-19224942 None:intergenic 35.0%
!! CAAAATAAGGAAAAGCATCC+TGG - chr5_4:19224953-19224972 Msa0842230:CDS 35.0%
! ACAATGTTTTCTCCAAATCC+AGG + chr5_4:19224974-19224993 None:intergenic 35.0%
CATACAGAAAAAAGTCCAGA+CGG + chr5_4:19225167-19225186 None:intergenic 35.0%
!! CAAACTGCTCTTTGAGTTTT+TGG - chr5_4:19225506-19225525 Msa0842230:CDS 35.0%
CTCTTATCGGGTAATCTATA+TGG - chr5_4:19225665-19225684 Msa0842230:CDS 35.0%
CATACCACAATTCAAAACCT+TGG - chr5_4:19225879-19225898 Msa0842230:intron 35.0%
ATTTATAGGAGACAAGGACA+TGG - chr5_4:19225952-19225971 Msa0842230:intron 35.0%
TTTCGGTACAACAAACAAAG+AGG - chr5_4:19226036-19226055 Msa0842230:intron 35.0%
! ATTGACTTTAAGCGATGGTT+GGG + chr5_4:19226095-19226114 None:intergenic 35.0%
!! AATGCATTGACTTTAAGCGA+TGG + chr5_4:19226100-19226119 None:intergenic 35.0%
!! TTTTAATGGTATTGAGGTGG+TGG + chr5_4:19226213-19226232 None:intergenic 35.0%
CAACTGCAATTTCTTCAAAG+TGG - chr5_4:19226249-19226268 Msa0842230:intron 35.0%
TCAGTTGTATATGTCAGCTT+TGG - chr5_4:19226313-19226332 Msa0842230:intron 35.0%
GAAATACTTGAGATTTGGCA+TGG - chr5_4:19226361-19226380 Msa0842230:intron 35.0%
! AACGATTTTTGTGGGTGATT+AGG - chr5_4:19226401-19226420 Msa0842230:intron 35.0%
! CCTTTTTCTTGTACCATGTT+TGG + chr5_4:19226427-19226446 None:intergenic 35.0%
CCAAACATGGTACAAGAAAA+AGG - chr5_4:19226424-19226443 Msa0842230:intron 35.0%
AAGGGACTACTAAAGAGAAA+GGG - chr5_4:19226467-19226486 Msa0842230:CDS 35.0%
TAAAGAGAAAGGGATGATTG+TGG - chr5_4:19226477-19226496 Msa0842230:CDS 35.0%
AAAGAGAAAGGGATGATTGT+GGG - chr5_4:19226478-19226497 Msa0842230:CDS 35.0%
! GTTTTGTCACACAAAGCAAT+TGG - chr5_4:19226520-19226539 Msa0842230:CDS 35.0%
TAATAGTAGGTTTGTGAGTG+AGG - chr5_4:19226639-19226658 Msa0842230:CDS 35.0%
AAGATCTGCTATTGAAATGG+CGG - chr5_4:19226759-19226778 Msa0842230:CDS 35.0%
!! CAAATTTTGGAGGTTGTTGT+AGG + chr5_4:19226821-19226840 None:intergenic 35.0%
! TGGTCTTGAATTGAAGCTTA+GGG + chr5_4:19224922-19224941 None:intergenic 35.0%
! ATGGTCTTGAATTGAAGCTT+AGG + chr5_4:19224923-19224942 None:intergenic 35.0%
!! CAAAATAAGGAAAAGCATCC+TGG - chr5_4:19224953-19224972 Msa0842230:CDS 35.0%
! ACAATGTTTTCTCCAAATCC+AGG + chr5_4:19224974-19224993 None:intergenic 35.0%
CATACAGAAAAAAGTCCAGA+CGG + chr5_4:19225167-19225186 None:intergenic 35.0%
!! CAAACTGCTCTTTGAGTTTT+TGG - chr5_4:19225506-19225525 Msa0842230:CDS 35.0%
CTCTTATCGGGTAATCTATA+TGG - chr5_4:19225665-19225684 Msa0842230:CDS 35.0%
CATACCACAATTCAAAACCT+TGG - chr5_4:19225879-19225898 Msa0842230:intron 35.0%
ATTTATAGGAGACAAGGACA+TGG - chr5_4:19225952-19225971 Msa0842230:intron 35.0%
TTTCGGTACAACAAACAAAG+AGG - chr5_4:19226036-19226055 Msa0842230:intron 35.0%
! ATTGACTTTAAGCGATGGTT+GGG + chr5_4:19226095-19226114 None:intergenic 35.0%
!! AATGCATTGACTTTAAGCGA+TGG + chr5_4:19226100-19226119 None:intergenic 35.0%
!! TTTTAATGGTATTGAGGTGG+TGG + chr5_4:19226213-19226232 None:intergenic 35.0%
CAACTGCAATTTCTTCAAAG+TGG - chr5_4:19226249-19226268 Msa0842230:intron 35.0%
TCAGTTGTATATGTCAGCTT+TGG - chr5_4:19226313-19226332 Msa0842230:intron 35.0%
GAAATACTTGAGATTTGGCA+TGG - chr5_4:19226361-19226380 Msa0842230:intron 35.0%
! AACGATTTTTGTGGGTGATT+AGG - chr5_4:19226401-19226420 Msa0842230:intron 35.0%
! CCTTTTTCTTGTACCATGTT+TGG + chr5_4:19226427-19226446 None:intergenic 35.0%
CCAAACATGGTACAAGAAAA+AGG - chr5_4:19226424-19226443 Msa0842230:intron 35.0%
AAGGGACTACTAAAGAGAAA+GGG - chr5_4:19226467-19226486 Msa0842230:CDS 35.0%
TAAAGAGAAAGGGATGATTG+TGG - chr5_4:19226477-19226496 Msa0842230:CDS 35.0%
AAAGAGAAAGGGATGATTGT+GGG - chr5_4:19226478-19226497 Msa0842230:CDS 35.0%
! GTTTTGTCACACAAAGCAAT+TGG - chr5_4:19226520-19226539 Msa0842230:CDS 35.0%
TAATAGTAGGTTTGTGAGTG+AGG - chr5_4:19226639-19226658 Msa0842230:CDS 35.0%
AAGATCTGCTATTGAAATGG+CGG - chr5_4:19226759-19226778 Msa0842230:CDS 35.0%
!! CAAATTTTGGAGGTTGTTGT+AGG + chr5_4:19226821-19226840 None:intergenic 35.0%
CATGGGAAGATTAACACATG+TGG + chr5_4:19224752-19224771 None:intergenic 40.0%
!! GCTTGAGCATTGAGTTTACA+TGG + chr5_4:19224787-19224806 None:intergenic 40.0%
TGTGGATGTACTCAGTGTTT+AGG + chr5_4:19224850-19224869 None:intergenic 40.0%
TCAAACTAATGAGTCGGTTG+TGG + chr5_4:19224868-19224887 None:intergenic 40.0%
!! AAGGAAAAGCATCCTGGATT+TGG - chr5_4:19224959-19224978 Msa0842230:CDS 40.0%
!! ACTGATTTGGCTCATGAGTT+TGG - chr5_4:19225103-19225122 Msa0842230:CDS 40.0%
!! CTGATTTGGCTCATGAGTTT+GGG - chr5_4:19225104-19225123 Msa0842230:CDS 40.0%
!!! ACGACCAAGGTTTTGAATTG+TGG + chr5_4:19225886-19225905 None:intergenic 40.0%
TGTAGAGATCTACCACGTTT+CGG - chr5_4:19226019-19226038 Msa0842230:intron 40.0%
!! TTGTTTGTTGTACCGAAACG+TGG + chr5_4:19226034-19226053 None:intergenic 40.0%
!! CATTGACTTTAAGCGATGGT+TGG + chr5_4:19226096-19226115 None:intergenic 40.0%
ACGAATTTGGGAGAGAATTG+GGG + chr5_4:19226152-19226171 None:intergenic 40.0%
GACGAATTTGGGAGAGAATT+GGG + chr5_4:19226153-19226172 None:intergenic 40.0%
AGACGAATTTGGGAGAGAAT+TGG + chr5_4:19226154-19226173 None:intergenic 40.0%
TGGATAAAACCTGCATGACA+TGG - chr5_4:19226269-19226288 Msa0842230:intron 40.0%
TATTGAAGGAGCTTGAGGAA+GGG - chr5_4:19226449-19226468 Msa0842230:intron 40.0%
GAAGGGACTACTAAAGAGAA+AGG - chr5_4:19226466-19226485 Msa0842230:CDS 40.0%
AAGAGAAAGGGATGATTGTG+GGG - chr5_4:19226479-19226498 Msa0842230:CDS 40.0%
TGTGACAAAACTTCCTCTTG+TGG + chr5_4:19226511-19226530 None:intergenic 40.0%
! GTGCCTTTTTGACACATAGT+GGG - chr5_4:19226542-19226561 Msa0842230:CDS 40.0%
!! TGCTATTGAAATGGCGGATT+TGG - chr5_4:19226765-19226784 Msa0842230:CDS 40.0%
! TCCAAGAGTGTAAGTCCTAA+TGG - chr5_4:19226790-19226809 Msa0842230:CDS 40.0%
ACCATTAGGACTTACACTCT+TGG + chr5_4:19226794-19226813 None:intergenic 40.0%
TTGTTGTAGGAGGAACCATT+AGG + chr5_4:19226808-19226827 None:intergenic 40.0%
!! ATTTTGGAGGTTGTTGTAGG+AGG + chr5_4:19226818-19226837 None:intergenic 40.0%
CATGGGAAGATTAACACATG+TGG + chr5_4:19224752-19224771 None:intergenic 40.0%
!! GCTTGAGCATTGAGTTTACA+TGG + chr5_4:19224787-19224806 None:intergenic 40.0%
TGTGGATGTACTCAGTGTTT+AGG + chr5_4:19224850-19224869 None:intergenic 40.0%
TCAAACTAATGAGTCGGTTG+TGG + chr5_4:19224868-19224887 None:intergenic 40.0%
!! AAGGAAAAGCATCCTGGATT+TGG - chr5_4:19224959-19224978 Msa0842230:CDS 40.0%
!! ACTGATTTGGCTCATGAGTT+TGG - chr5_4:19225103-19225122 Msa0842230:CDS 40.0%
!! CTGATTTGGCTCATGAGTTT+GGG - chr5_4:19225104-19225123 Msa0842230:CDS 40.0%
!!! ACGACCAAGGTTTTGAATTG+TGG + chr5_4:19225886-19225905 None:intergenic 40.0%
TGTAGAGATCTACCACGTTT+CGG - chr5_4:19226019-19226038 Msa0842230:intron 40.0%
!! TTGTTTGTTGTACCGAAACG+TGG + chr5_4:19226034-19226053 None:intergenic 40.0%
!! CATTGACTTTAAGCGATGGT+TGG + chr5_4:19226096-19226115 None:intergenic 40.0%
ACGAATTTGGGAGAGAATTG+GGG + chr5_4:19226152-19226171 None:intergenic 40.0%
GACGAATTTGGGAGAGAATT+GGG + chr5_4:19226153-19226172 None:intergenic 40.0%
AGACGAATTTGGGAGAGAAT+TGG + chr5_4:19226154-19226173 None:intergenic 40.0%
TGGATAAAACCTGCATGACA+TGG - chr5_4:19226269-19226288 Msa0842230:intron 40.0%
TATTGAAGGAGCTTGAGGAA+GGG - chr5_4:19226449-19226468 Msa0842230:intron 40.0%
GAAGGGACTACTAAAGAGAA+AGG - chr5_4:19226466-19226485 Msa0842230:CDS 40.0%
AAGAGAAAGGGATGATTGTG+GGG - chr5_4:19226479-19226498 Msa0842230:CDS 40.0%
TGTGACAAAACTTCCTCTTG+TGG + chr5_4:19226511-19226530 None:intergenic 40.0%
! GTGCCTTTTTGACACATAGT+GGG - chr5_4:19226542-19226561 Msa0842230:CDS 40.0%
!! TGCTATTGAAATGGCGGATT+TGG - chr5_4:19226765-19226784 Msa0842230:CDS 40.0%
! TCCAAGAGTGTAAGTCCTAA+TGG - chr5_4:19226790-19226809 Msa0842230:CDS 40.0%
ACCATTAGGACTTACACTCT+TGG + chr5_4:19226794-19226813 None:intergenic 40.0%
TTGTTGTAGGAGGAACCATT+AGG + chr5_4:19226808-19226827 None:intergenic 40.0%
!! ATTTTGGAGGTTGTTGTAGG+AGG + chr5_4:19226818-19226837 None:intergenic 40.0%
! TGGTGACCTTGCTACTGATT+TGG - chr5_4:19225090-19225109 Msa0842230:CDS 45.0%
CATGAGCCAAATCAGTAGCA+AGG + chr5_4:19225099-19225118 None:intergenic 45.0%
TTTCTGTATGCCCAAGCTCT+TGG - chr5_4:19225177-19225196 Msa0842230:CDS 45.0%
TCATTGCACTCCAAGAGCTT+GGG + chr5_4:19225190-19225209 None:intergenic 45.0%
TGCAATGAGCTTCCCATTAG+AGG - chr5_4:19225202-19225221 Msa0842230:CDS 45.0%
CGCATCATAAGAAACGTGTC+AGG - chr5_4:19225977-19225996 Msa0842230:intron 45.0%
CATAAGAAACGTGTCAGGCA+TGG - chr5_4:19225982-19226001 Msa0842230:intron 45.0%
GGGGACTTGAAGACGAATTT+GGG + chr5_4:19226164-19226183 None:intergenic 45.0%
TGGGGACTTGAAGACGAATT+TGG + chr5_4:19226165-19226184 None:intergenic 45.0%
GTCCCCAAACTCTACACTAT+TGG - chr5_4:19226178-19226197 Msa0842230:intron 45.0%
GGCCAATAGTGTAGAGTTTG+GGG + chr5_4:19226183-19226202 None:intergenic 45.0%
GGGCCAATAGTGTAGAGTTT+GGG + chr5_4:19226184-19226203 None:intergenic 45.0%
AGGACTATTGAAGGAGCTTG+AGG - chr5_4:19226444-19226463 Msa0842230:intron 45.0%
CTATTGAAGGAGCTTGAGGA+AGG - chr5_4:19226448-19226467 Msa0842230:intron 45.0%
! GGTGCCTTTTTGACACATAG+TGG - chr5_4:19226541-19226560 Msa0842230:CDS 45.0%
CCACCCACTATGTGTCAAAA+AGG + chr5_4:19226548-19226567 None:intergenic 45.0%
!! CCTTTTTGACACATAGTGGG+TGG - chr5_4:19226545-19226564 Msa0842230:CDS 45.0%
! TAGTGGGTGGAACTCTACTT+TGG - chr5_4:19226558-19226577 Msa0842230:CDS 45.0%
! GAACTCTACTTTGGAGAGTG+TGG - chr5_4:19226567-19226586 Msa0842230:CDS 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG - chr5_4:19226574-19226593 Msa0842230:CDS 45.0%
! CTTTGGAGAGTGTGGTTTGT+GGG - chr5_4:19226575-19226594 Msa0842230:CDS 45.0%
! TTTGGAGAGTGTGGTTTGTG+GGG - chr5_4:19226576-19226595 Msa0842230:CDS 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG - chr5_4:19226644-19226663 Msa0842230:CDS 45.0%
TGAGGTTTGGAAGCTTGGAT+TGG - chr5_4:19226657-19226676 Msa0842230:CDS 45.0%
CATCACTGTTGGAACATGTG+TGG - chr5_4:19226932-19226951 Msa0842230:exon 45.0%
! TGGTGACCTTGCTACTGATT+TGG - chr5_4:19225090-19225109 Msa0842230:CDS 45.0%
CATGAGCCAAATCAGTAGCA+AGG + chr5_4:19225099-19225118 None:intergenic 45.0%
TTTCTGTATGCCCAAGCTCT+TGG - chr5_4:19225177-19225196 Msa0842230:CDS 45.0%
TCATTGCACTCCAAGAGCTT+GGG + chr5_4:19225190-19225209 None:intergenic 45.0%
TGCAATGAGCTTCCCATTAG+AGG - chr5_4:19225202-19225221 Msa0842230:CDS 45.0%
CGCATCATAAGAAACGTGTC+AGG - chr5_4:19225977-19225996 Msa0842230:intron 45.0%
CATAAGAAACGTGTCAGGCA+TGG - chr5_4:19225982-19226001 Msa0842230:intron 45.0%
GGGGACTTGAAGACGAATTT+GGG + chr5_4:19226164-19226183 None:intergenic 45.0%
TGGGGACTTGAAGACGAATT+TGG + chr5_4:19226165-19226184 None:intergenic 45.0%
GTCCCCAAACTCTACACTAT+TGG - chr5_4:19226178-19226197 Msa0842230:intron 45.0%
GGCCAATAGTGTAGAGTTTG+GGG + chr5_4:19226183-19226202 None:intergenic 45.0%
GGGCCAATAGTGTAGAGTTT+GGG + chr5_4:19226184-19226203 None:intergenic 45.0%
AGGACTATTGAAGGAGCTTG+AGG - chr5_4:19226444-19226463 Msa0842230:intron 45.0%
CTATTGAAGGAGCTTGAGGA+AGG - chr5_4:19226448-19226467 Msa0842230:intron 45.0%
! GGTGCCTTTTTGACACATAG+TGG - chr5_4:19226541-19226560 Msa0842230:CDS 45.0%
CCACCCACTATGTGTCAAAA+AGG + chr5_4:19226548-19226567 None:intergenic 45.0%
!! CCTTTTTGACACATAGTGGG+TGG - chr5_4:19226545-19226564 Msa0842230:CDS 45.0%
! TAGTGGGTGGAACTCTACTT+TGG - chr5_4:19226558-19226577 Msa0842230:CDS 45.0%
! GAACTCTACTTTGGAGAGTG+TGG - chr5_4:19226567-19226586 Msa0842230:CDS 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG - chr5_4:19226574-19226593 Msa0842230:CDS 45.0%
! CTTTGGAGAGTGTGGTTTGT+GGG - chr5_4:19226575-19226594 Msa0842230:CDS 45.0%
! TTTGGAGAGTGTGGTTTGTG+GGG - chr5_4:19226576-19226595 Msa0842230:CDS 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG - chr5_4:19226644-19226663 Msa0842230:CDS 45.0%
TGAGGTTTGGAAGCTTGGAT+TGG - chr5_4:19226657-19226676 Msa0842230:CDS 45.0%
CATCACTGTTGGAACATGTG+TGG - chr5_4:19226932-19226951 Msa0842230:exon 45.0%
ATCTTCCCATGTCCAGCACA+AGG - chr5_4:19224761-19224780 Msa0842230:three_prime_UTR 50.0%
!! GAGTTTACATGGCCTTGTGC+TGG + chr5_4:19224776-19224795 None:intergenic 50.0%
CTCATTGCACTCCAAGAGCT+TGG + chr5_4:19225191-19225210 None:intergenic 50.0%
GGGGCCAATAGTGTAGAGTT+TGG + chr5_4:19226185-19226204 None:intergenic 50.0%
! TATTGAGGTGGTGGTGAAGG+GGG + chr5_4:19226204-19226223 None:intergenic 50.0%
! GTATTGAGGTGGTGGTGAAG+GGG + chr5_4:19226205-19226224 None:intergenic 50.0%
! GGTATTGAGGTGGTGGTGAA+GGG + chr5_4:19226206-19226225 None:intergenic 50.0%
! TGGTATTGAGGTGGTGGTGA+AGG + chr5_4:19226207-19226226 None:intergenic 50.0%
AGAATCGAGCCATGTCATGC+AGG + chr5_4:19226281-19226300 None:intergenic 50.0%
GTGGGTGATTAGGCCAAACA+TGG - chr5_4:19226411-19226430 Msa0842230:intron 50.0%
AGAAAGGGATGATTGTGGGG+TGG - chr5_4:19226482-19226501 Msa0842230:CDS 50.0%
GAAAGGGATGATTGTGGGGT+GGG - chr5_4:19226483-19226502 Msa0842230:CDS 50.0%
! GTGGGGTGCCTATGATATGT+TGG - chr5_4:19226593-19226612 Msa0842230:CDS 50.0%
GTGAGTGAGGTTTGGAAGCT+TGG - chr5_4:19226652-19226671 Msa0842230:CDS 50.0%
ATCTTCCCATGTCCAGCACA+AGG - chr5_4:19224761-19224780 Msa0842230:three_prime_UTR 50.0%
!! GAGTTTACATGGCCTTGTGC+TGG + chr5_4:19224776-19224795 None:intergenic 50.0%
CTCATTGCACTCCAAGAGCT+TGG + chr5_4:19225191-19225210 None:intergenic 50.0%
GGGGCCAATAGTGTAGAGTT+TGG + chr5_4:19226185-19226204 None:intergenic 50.0%
! TATTGAGGTGGTGGTGAAGG+GGG + chr5_4:19226204-19226223 None:intergenic 50.0%
! GTATTGAGGTGGTGGTGAAG+GGG + chr5_4:19226205-19226224 None:intergenic 50.0%
! GGTATTGAGGTGGTGGTGAA+GGG + chr5_4:19226206-19226225 None:intergenic 50.0%
! TGGTATTGAGGTGGTGGTGA+AGG + chr5_4:19226207-19226226 None:intergenic 50.0%
AGAATCGAGCCATGTCATGC+AGG + chr5_4:19226281-19226300 None:intergenic 50.0%
GTGGGTGATTAGGCCAAACA+TGG - chr5_4:19226411-19226430 Msa0842230:intron 50.0%
AGAAAGGGATGATTGTGGGG+TGG - chr5_4:19226482-19226501 Msa0842230:CDS 50.0%
GAAAGGGATGATTGTGGGGT+GGG - chr5_4:19226483-19226502 Msa0842230:CDS 50.0%
! GTGGGGTGCCTATGATATGT+TGG - chr5_4:19226593-19226612 Msa0842230:CDS 50.0%
GTGAGTGAGGTTTGGAAGCT+TGG - chr5_4:19226652-19226671 Msa0842230:CDS 50.0%
!! CATGGCCTTGTGCTGGACAT+GGG + chr5_4:19224769-19224788 None:intergenic 55.0%
!! ACATGGCCTTGTGCTGGACA+TGG + chr5_4:19224770-19224789 None:intergenic 55.0%
!! CATGGCCTTGTGCTGGACAT+GGG + chr5_4:19224769-19224788 None:intergenic 55.0%
!! ACATGGCCTTGTGCTGGACA+TGG + chr5_4:19224770-19224789 None:intergenic 55.0%
! CTGTTGGTGCTTGTGCCGTC+TGG - chr5_4:19225149-19225168 Msa0842230:CDS 60.0%
! TGTGGGGTGGGTTCCACAAG+AGG - chr5_4:19226495-19226514 Msa0842230:CDS 60.0%
! CTGTTGGTGCTTGTGCCGTC+TGG - chr5_4:19225149-19225168 Msa0842230:CDS 60.0%
! TGTGGGGTGGGTTCCACAAG+AGG - chr5_4:19226495-19226514 Msa0842230:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 19224719 19226958 19224719 ID=Msa0842230;Name=Msa0842230
chr5_4 mRNA 19224719 19226958 19224719 ID=Msa0842230-mRNA-1;Parent=Msa0842230;Name=Msa0842230-mRNA-1;_AED=0.34;_eAED=0.34;_QI=21|1|1|1|1|1|2|88|464
chr5_4 exon 19224719 19225717 19224719 ID=Msa0842230-mRNA-1:exon:8035;Parent=Msa0842230-mRNA-1
chr5_4 exon 19226454 19226958 19226454 ID=Msa0842230-mRNA-1:exon:8034;Parent=Msa0842230-mRNA-1
chr5_4 five_prime_UTR 19226938 19226958 19226938 ID=Msa0842230-mRNA-1:five_prime_utr;Parent=Msa0842230-mRNA-1
chr5_4 CDS 19226454 19226937 19226454 ID=Msa0842230-mRNA-1:cds;Parent=Msa0842230-mRNA-1
chr5_4 CDS 19224807 19225717 19224807 ID=Msa0842230-mRNA-1:cds;Parent=Msa0842230-mRNA-1
chr5_4 three_prime_UTR 19224719 19224806 19224719 ID=Msa0842230-mRNA-1:three_prime_utr;Parent=Msa0842230-mRNA-1
Gene Sequence

>Msa0842230

ATGGAAACACCACATGTGTTAATCTTCCCATGTCCAGCACAAGGCCATGTAAACTCAATGCTCAAGCTAGCTGAACTTCTTGCAATTCAAAATCTTCACATAACATTCCTAAACACTGAGTACATCCACAACCGACTCATTAGTTTGAATGATGATATTCAAGCTCTTTTAGAATGTTACCCTAAGCTTCAATTCAAGACCATCTCTGATTTTCAAAATAAGGAAAAGCATCCTGGATTTGGAGAAAACATTGTAGATGTAATTTCCTCCATAAATATGTATGGTAAGTCTTCTTTAAGAGATATTATTGTCTCTGAGAAAGTAAGTTGCATTATTTTAGATGGAGGTTTTGGTGACCTTGCTACTGATTTGGCTCATGAGTTTGGGATACAATTGATACATTTTCGTACTGTTGGTGCTTGTGCCGTCTGGACTTTTTTCTGTATGCCCAAGCTCTTGGAGTGCAATGAGCTTCCCATTAGAGGAGACAAGGACATGGATCGCATCATAAGAAACGTGTCAGGCATGGAGAACATACTTCGATGTAGAGATCTACCACGTTTCGGTACAACAAACAAAGAGGACCATATCGTTTTAGATAAAGTTTTACAACTAACCCAACCATCGCTTAAAGTCAATGCATTAATACTCAACACATTTGAAGATCTAGAGTCCCCAATTCTCTCCCAAATTCGTCTTCAAGTCCCCAAACTCTACACTATTGGCCCCCTTCACCACCACCTCAATACCATTAAAAAAAAAACATCATCTTTCAACTGCAATTTCTTCAAAGTGGATAAAACCTGCATGACATGGCTCGATTCTCAACCATCAAATTCAGTTGTATATGTCAGCTTTGGCAGTATCACTACAATGACAAGAGAAGAAATACTTGAGATTTGGCATGGTTTATTGAATAGCAAAAAACGATTTTTGTGGGTGATTAGGCCAAACATGGTACAAGAAAAAGGACTATTGAAGGAGCTTGAGGAAGGGACTACTAAAGAGAAAGGGATGATTGTGGGGTGGGTTCCACAAGAGGAAGTTTTGTCACACAAAGCAATTGGTGCCTTTTTGACACATAGTGGGTGGAACTCTACTTTGGAGAGTGTGGTTTGTGGGGTGCCTATGATATGTTGGCCTTATTTTGCTGATCAACAAATTAATAGTAGGTTTGTGAGTGAGGTTTGGAAGCTTGGATTGGATATGAAAGATGTTTGTGATAGGAATGTTGTTGAGAAAATGGTGAATGATATTATGATGAACAAGAAGGAGGAGTTTTCAAGATCTGCTATTGAAATGGCGGATTTGGCTTCCAAGAGTGTAAGTCCTAATGGTTCCTCCTACAACAACCTCCAAAATTTGATTCAGTATATAAGGTCTACTAGCTCATAA

Protein sequence

>Msa0842230

METPHVLIFPCPAQGHVNSMLKLAELLAIQNLHITFLNTEYIHNRLISLNDDIQALLECYPKLQFKTISDFQNKEKHPGFGENIVDVISSINMYGKSSLRDIIVSEKVSCIILDGGFGDLATDLAHEFGIQLIHFRTVGACAVWTFFCMPKLLECNELPIRGDKDMDRIIRNVSGMENILRCRDLPRFGTTNKEDHIVLDKVLQLTQPSLKVNALILNTFEDLESPILSQIRLQVPKLYTIGPLHHHLNTIKKKTSSFNCNFFKVDKTCMTWLDSQPSNSVVYVSFGSITTMTREEILEIWHGLLNSKKRFLWVIRPNMVQEKGLLKELEEGTTKEKGMIVGWVPQEEVLSHKAIGAFLTHSGWNSTLESVVCGVPMICWPYFADQQINSRFVSEVWKLGLDMKDVCDRNVVEKMVNDIMMNKKEEFSRSAIEMADLASKSVSPNGSSYNNLQNLIQYIRSTSS*