Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763480 | sp|P27141|CAHC_TOBAC | 68.702 | 262 | 67 | 2 | 18 | 264 | 60 | 321 | 1.90e-130 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763480 | G7K1D4 | 93.525 | 278 | 4 | 1 | 1 | 264 | 1 | 278 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0763480 | Msa0805610 | 0.903575 | 3.011476e-79 | -8.615850e-47 |
| Msa0763480 | Msa0842980 | 0.892878 | 1.057007e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763480 | MtrunA17_Chr5g0413551 | 92.969 | 256 | 4 | 1 | 23 | 264 | 1 | 256 | 2.24e-175 | 483 |
| Msa0763480 | MtrunA17_Chr8g0365441 | 75.781 | 256 | 47 | 2 | 23 | 264 | 1 | 255 | 2.14e-141 | 397 |
| Msa0763480 | MtrunA17_Chr6g0450641 | 60.150 | 266 | 86 | 3 | 18 | 264 | 67 | 331 | 8.21e-111 | 322 |
| Msa0763480 | MtrunA17_Chr3g0117661 | 52.140 | 257 | 108 | 2 | 23 | 264 | 1 | 257 | 1.55e-86 | 258 |
| Msa0763480 | MtrunA17_Chr3g0117691 | 50.584 | 257 | 112 | 3 | 23 | 264 | 1 | 257 | 1.84e-83 | 250 |
| Msa0763480 | MtrunA17_Chr2g0279581 | 50.256 | 195 | 84 | 2 | 74 | 256 | 89 | 282 | 9.46e-67 | 209 |
| Msa0763480 | MtrunA17_Chr5g0427341 | 48.980 | 196 | 86 | 2 | 74 | 256 | 94 | 288 | 2.61e-60 | 193 |
| Msa0763480 | MtrunA17_Chr3g0117671 | 72.727 | 44 | 12 | 0 | 105 | 148 | 1 | 44 | 3.01e-17 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0763480 | AT1G70410.2 | 61.290 | 279 | 93 | 1 | 1 | 264 | 1 | 279 | 3.38e-124 | 355 |
| Msa0763480 | AT5G14740.9 | 66.409 | 259 | 70 | 2 | 23 | 264 | 1 | 259 | 4.85e-123 | 351 |
| Msa0763480 | AT5G14740.8 | 66.409 | 259 | 70 | 2 | 23 | 264 | 1 | 259 | 4.85e-123 | 351 |
| Msa0763480 | AT5G14740.7 | 66.409 | 259 | 70 | 2 | 23 | 264 | 1 | 259 | 4.85e-123 | 351 |
| Msa0763480 | AT5G14740.2 | 66.409 | 259 | 70 | 2 | 23 | 264 | 1 | 259 | 4.85e-123 | 351 |
| Msa0763480 | AT5G14740.6 | 66.409 | 259 | 70 | 2 | 23 | 264 | 1 | 259 | 4.85e-123 | 351 |
| Msa0763480 | AT5G14740.1 | 63.636 | 275 | 82 | 3 | 8 | 264 | 57 | 331 | 7.09e-122 | 351 |
| Msa0763480 | AT5G14740.4 | 63.273 | 275 | 82 | 4 | 8 | 264 | 57 | 330 | 2.79e-119 | 344 |
| Msa0763480 | AT5G14740.3 | 62.545 | 275 | 84 | 4 | 8 | 264 | 57 | 330 | 4.48e-118 | 341 |
| Msa0763480 | AT1G70410.3 | 62.646 | 257 | 81 | 1 | 23 | 264 | 1 | 257 | 6.32e-117 | 335 |
| Msa0763480 | AT1G70410.1 | 62.646 | 257 | 81 | 1 | 23 | 264 | 1 | 257 | 6.32e-117 | 335 |
| Msa0763480 | AT3G01500.4 | 62.548 | 259 | 80 | 2 | 23 | 264 | 1 | 259 | 6.51e-114 | 328 |
| Msa0763480 | AT3G01500.1 | 62.548 | 259 | 80 | 2 | 23 | 264 | 1 | 259 | 6.84e-114 | 328 |
| Msa0763480 | AT3G01500.3 | 62.452 | 261 | 81 | 2 | 21 | 264 | 76 | 336 | 1.35e-113 | 330 |
| Msa0763480 | AT3G01500.2 | 62.452 | 261 | 81 | 2 | 21 | 264 | 76 | 336 | 2.21e-113 | 330 |
| Msa0763480 | AT1G23730.2 | 59.144 | 257 | 90 | 1 | 23 | 264 | 1 | 257 | 6.14e-110 | 318 |
| Msa0763480 | AT1G23730.1 | 59.144 | 257 | 90 | 1 | 23 | 264 | 1 | 257 | 6.14e-110 | 318 |
| Msa0763480 | AT5G14740.5 | 64.390 | 205 | 56 | 2 | 23 | 210 | 73 | 277 | 4.71e-89 | 267 |
| Msa0763480 | AT4G33580.3 | 45.327 | 214 | 98 | 4 | 61 | 256 | 67 | 279 | 3.32e-58 | 187 |
| Msa0763480 | AT4G33580.1 | 45.327 | 214 | 98 | 4 | 61 | 256 | 67 | 279 | 3.32e-58 | 187 |
| Msa0763480 | AT4G33580.2 | 45.116 | 215 | 98 | 5 | 61 | 256 | 67 | 280 | 1.61e-57 | 186 |
| Msa0763480 | AT1G58180.2 | 37.751 | 249 | 138 | 3 | 21 | 255 | 28 | 273 | 8.17e-56 | 181 |
| Msa0763480 | AT1G58180.4 | 37.751 | 249 | 138 | 3 | 21 | 255 | 28 | 273 | 8.17e-56 | 181 |
| Msa0763480 | AT1G58180.7 | 40.090 | 222 | 118 | 2 | 48 | 255 | 2 | 222 | 6.07e-55 | 177 |
| Msa0763480 | AT1G58180.3 | 40.090 | 222 | 118 | 2 | 48 | 255 | 2 | 222 | 6.07e-55 | 177 |
| Msa0763480 | AT1G58180.6 | 40.090 | 222 | 118 | 2 | 48 | 255 | 2 | 222 | 6.07e-55 | 177 |
| Msa0763480 | AT1G58180.1 | 38.938 | 226 | 121 | 3 | 21 | 232 | 28 | 250 | 5.87e-51 | 167 |
| Msa0763480 | AT1G58180.5 | 38.725 | 204 | 108 | 3 | 21 | 210 | 28 | 228 | 9.66e-43 | 147 |
Find 115 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCCTCTGTATCCATTTA+AGG | 0.107949 | 5_2:+22711800 | Msa0763480:CDS |
| AGTATGCCCTTCTCACATTT+TGG | 0.186284 | 5_2:+22708386 | Msa0763480:CDS |
| GTTGAGAATATTGTAGTTAT+TGG | 0.204310 | 5_2:+22710201 | Msa0763480:CDS |
| TTAAACCAGTGGCTTGAATT+TGG | 0.236531 | 5_2:+22712271 | Msa0763480:three_prime_UTR |
| GCCCCAGCCATTTATCTCTT+TGG | 0.249549 | 5_2:-22703466 | None:intergenic |
| CTTGCGGTGGTCCCATCATC+TGG | 0.251001 | 5_2:-22710264 | None:intergenic |
| CACTTGACACTCCAACTTAA+AGG | 0.269238 | 5_2:-22712089 | None:intergenic |
| ATATGCGGTCTTACATTTAA+AGG | 0.280127 | 5_2:+22709120 | Msa0763480:CDS |
| GACCTTAGGGCTCTGGCCTT+TGG | 0.303340 | 5_2:-22708015 | None:intergenic |
| CGCCCCTGCTCCCGAATACT+TGG | 0.306885 | 5_2:-22709089 | None:intergenic |
| TTTGCCCCTCTGCATGAAAA+TGG | 0.312676 | 5_2:-22702664 | None:intergenic |
| CAGCTGCTGTGGAGGCATAA+AGG | 0.320529 | 5_2:+22710227 | Msa0763480:CDS |
| AGCTGCTGTGGAGGCATAAA+GGG | 0.327110 | 5_2:+22710228 | Msa0763480:CDS |
| TAAAATATGATTGGAGAGAT+TGG | 0.355748 | 5_2:-22702698 | None:intergenic |
| GGTGTTGGAGAGACCTTAAA+TGG | 0.356865 | 5_2:-22711813 | None:intergenic |
| TTTCATTCCCTTGTATGTTT+AGG | 0.369114 | 5_2:+22702615 | Msa0763480:five_prime_UTR |
| GGAGCTGACGGCGGAGTTAG+AGG | 0.369439 | 5_2:+22707179 | Msa0763480:CDS |
| TATCATCAACATTAGTCCTT+TGG | 0.372973 | 5_2:+22711855 | Msa0763480:three_prime_UTR |
| CCAACCGGGTGAAGCCTTTG+TGG | 0.395118 | 5_2:+22708413 | Msa0763480:CDS |
| CAATGTAACTAAAATATGAT+TGG | 0.422209 | 5_2:-22702707 | None:intergenic |
| GGGAATGAAAATGAATTTGA+AGG | 0.426102 | 5_2:-22702602 | None:intergenic |
| AAGAGGACCAAAGAGATAAA+TGG | 0.427405 | 5_2:+22703459 | Msa0763480:exon |
| GATAATGTTTATGCTACATT+GGG | 0.438170 | 5_2:+22702401 | None:intergenic |
| ATCCTCTCATCCGGGTTAAA+CGG | 0.445021 | 5_2:-22707216 | None:intergenic |
| CTAATCCAAATTCAAGCCAC+TGG | 0.446194 | 5_2:-22712276 | None:intergenic |
| GAAAAGTAAACCTTGTCATA+TGG | 0.446345 | 5_2:-22708462 | None:intergenic |
| CTGCAAGTTCACTTTGGTGT+TGG | 0.455447 | 5_2:-22711828 | None:intergenic |
| TGAGTTCCTTGAGAATTTCA+AGG | 0.457824 | 5_2:+22712231 | Msa0763480:three_prime_UTR |
| GAACCATGTTGGCGATGTTA+CGG | 0.461219 | 5_2:-22708437 | None:intergenic |
| ATCTTCTTCACCTTTACTTG+TGG | 0.465958 | 5_2:+22702435 | Msa0763480:five_prime_UTR |
| GTTAAACGGCTTTGAACCGT+TGG | 0.469755 | 5_2:-22707202 | None:intergenic |
| CCGGATCGGATCCTCTCATC+CGG | 0.470107 | 5_2:-22707225 | None:intergenic |
| CTCATGTCTATCCCAGATGA+TGG | 0.470494 | 5_2:+22710252 | Msa0763480:CDS |
| TGTGAGTTAATAGCAGCATT+GGG | 0.470532 | 5_2:-22702534 | None:intergenic |
| TCTCAAGGAACTCAAACAAA+TGG | 0.471386 | 5_2:-22712222 | None:intergenic |
| GAAGCTGTGAATGTATCTCT+TGG | 0.472140 | 5_2:+22711656 | Msa0763480:CDS |
| GGATAATGTTTATGCTACAT+TGG | 0.472933 | 5_2:+22702400 | None:intergenic |
| TATGCAAAGCACACATGAAA+AGG | 0.475075 | 5_2:-22702572 | None:intergenic |
| GCAAGTTCACCGTACAGCTC+AGG | 0.475420 | 5_2:-22707993 | None:intergenic |
| TGTTCTTAAGCCACAAGTAA+AGG | 0.476743 | 5_2:-22702445 | None:intergenic |
| AGTCTTGAAACTAACAAAAC+CGG | 0.477828 | 5_2:-22707244 | None:intergenic |
| ACAACACCATCTCTCACAAA+TGG | 0.478188 | 5_2:-22711695 | None:intergenic |
| AAATGGATACAGAGGGCAAA+AGG | 0.488532 | 5_2:-22711796 | None:intergenic |
| CAGACCAAGTATTCGGGAGC+AGG | 0.489426 | 5_2:+22709085 | Msa0763480:intron |
| ATGTGAGTTAATAGCAGCAT+TGG | 0.490551 | 5_2:-22702535 | None:intergenic |
| CGGTTCAAAGCCGTTTAACC+CGG | 0.492215 | 5_2:+22707206 | Msa0763480:CDS |
| AATGTATGTTTCTTTCTCGA+TGG | 0.492489 | 5_2:-22711909 | None:intergenic |
| ATGTAAGACCGCATATTCAA+TGG | 0.508542 | 5_2:-22709113 | None:intergenic |
| TTCAGGGAGAAAGCTGAGCT+TGG | 0.509469 | 5_2:+22707132 | Msa0763480:intron |
| AATAGCTGACCTTAGGGCTC+TGG | 0.511436 | 5_2:-22708022 | None:intergenic |
| CAAATAGAGTTGACATCAGT+AGG | 0.512312 | 5_2:-22712315 | None:intergenic |
| ACTTGTTTCTAATTTAACCT+TGG | 0.514008 | 5_2:-22711437 | None:intergenic |
| AAGAAAACCCTTGCTTTGAA+AGG | 0.517445 | 5_2:+22711719 | Msa0763480:CDS |
| AAGCTGTGAATGTATCTCTT+GGG | 0.518223 | 5_2:+22711657 | Msa0763480:CDS |
| TATATACTGCAAGTTCACTT+TGG | 0.518243 | 5_2:-22711834 | None:intergenic |
| GACCAAAGAGATAAATGGCT+GGG | 0.523819 | 5_2:+22703464 | Msa0763480:exon |
| CGTCAGCTCCTTGATCTTCA+CGG | 0.527964 | 5_2:-22707166 | None:intergenic |
| ATGTGCTCCTTTCAAAGCAA+GGG | 0.535168 | 5_2:-22711726 | None:intergenic |
| CATCGCCGCCGTGAAGATCA+AGG | 0.541374 | 5_2:+22707158 | Msa0763480:CDS |
| AATGTTTATGCTACATTGGG+AGG | 0.541756 | 5_2:+22702404 | None:intergenic |
| AGACCAAGTATTCGGGAGCA+GGG | 0.545106 | 5_2:+22709086 | Msa0763480:intron |
| CAAGTATTCGGGAGCAGGGG+CGG | 0.551194 | 5_2:+22709090 | Msa0763480:CDS |
| GCAGTGCACAAACTGTGAAA+AGG | 0.551365 | 5_2:+22711477 | Msa0763480:CDS |
| TAGCACATAGACCTTTAAGT+TGG | 0.553212 | 5_2:+22712078 | Msa0763480:three_prime_UTR |
| AGAGTTGACATCAGTAGGAA+AGG | 0.553440 | 5_2:-22712310 | None:intergenic |
| ACTTATCCATTTGTGAGAGA+TGG | 0.556933 | 5_2:+22711689 | Msa0763480:CDS |
| TTGCGGTGGTCCCATCATCT+GGG | 0.562712 | 5_2:-22710263 | None:intergenic |
| AATGTGCTCCTTTCAAAGCA+AGG | 0.563009 | 5_2:-22711727 | None:intergenic |
| AATCAGAAGGAAGACATGGC+TGG | 0.564330 | 5_2:+22706858 | Msa0763480:intron |
| GAGTTCCTTGAGAATTTCAA+GGG | 0.566239 | 5_2:+22712232 | Msa0763480:three_prime_UTR |
| CCGGATGAGAGGATCCGATC+CGG | 0.568309 | 5_2:+22707225 | Msa0763480:CDS |
| AAGTCTGGTCAGAGTTGCGA+TGG | 0.569242 | 5_2:-22706898 | None:intergenic |
| TGGAAATCCAAAATGTGAGA+AGG | 0.571528 | 5_2:-22708393 | None:intergenic |
| GGACCAAAGAGATAAATGGC+TGG | 0.573609 | 5_2:+22703463 | Msa0763480:exon |
| GGAATGAAAATGAATTTGAA+GGG | 0.575219 | 5_2:-22702601 | None:intergenic |
| CCACAAAGGCTTCACCCGGT+TGG | 0.578743 | 5_2:-22708413 | None:intergenic |
| GGAAATCCAAAATGTGAGAA+GGG | 0.582778 | 5_2:-22708392 | None:intergenic |
| GTGAGTAAATATTCTCACAT+TGG | 0.583022 | 5_2:+22712111 | Msa0763480:three_prime_UTR |
| AAATGCAAAGCAGGGTGAAG+AGG | 0.585160 | 5_2:+22703442 | Msa0763480:intron |
| TGTGTGTGCCTAAACATACA+AGG | 0.588685 | 5_2:-22702623 | None:intergenic |
| ATTGGACACAGCTGCTGTGG+AGG | 0.590942 | 5_2:+22710219 | Msa0763480:CDS |
| CGGACCACAAAGGCTTCACC+CGG | 0.592537 | 5_2:-22708417 | None:intergenic |
| TGCCAAAGGCCAGAGCCCTA+AGG | 0.593445 | 5_2:+22708013 | Msa0763480:CDS |
| TCATGTCTATCCCAGATGAT+GGG | 0.593762 | 5_2:+22710253 | Msa0763480:CDS |
| TTGCAATCCAGCAAGGTCCA+AGG | 0.594272 | 5_2:+22711420 | Msa0763480:intron |
| TGACAATGAGTTTAAACCAG+TGG | 0.595004 | 5_2:+22712260 | Msa0763480:three_prime_UTR |
| AGGAAGAATCCTGAGCTGTA+CGG | 0.595793 | 5_2:+22707984 | Msa0763480:intron |
| ACTAGCCCTTGAAATTCTCA+AGG | 0.596300 | 5_2:-22712237 | None:intergenic |
| GACCAAGTATTCGGGAGCAG+GGG | 0.598369 | 5_2:+22709087 | Msa0763480:intron |
| AAGTAAACCTTGTCATATGG+TGG | 0.601200 | 5_2:-22708459 | None:intergenic |
| GTTATTGGACACAGCTGCTG+TGG | 0.606630 | 5_2:+22710216 | Msa0763480:CDS |
| AGCCGTTTAACCCGGATGAG+AGG | 0.610912 | 5_2:+22707214 | Msa0763480:CDS |
| CATGGTTCCACCATATGACA+AGG | 0.613750 | 5_2:+22708452 | Msa0763480:CDS |
| CATGGCTGGAGAAACATTCG+AGG | 0.615024 | 5_2:+22706872 | Msa0763480:CDS |
| CGGATCGGATCCTCTCATCC+GGG | 0.617375 | 5_2:-22707224 | None:intergenic |
| GTCATATGGTGGAACCATGT+TGG | 0.618619 | 5_2:-22708448 | None:intergenic |
| TTGCACAAGCAAGATTGTCT+CGG | 0.626170 | 5_2:+22703513 | Msa0763480:CDS |
| GGTCCGTAACATCGCCAACA+TGG | 0.627271 | 5_2:+22708434 | Msa0763480:CDS |
| ACCAAAGAGATAAATGGCTG+GGG | 0.628077 | 5_2:+22703465 | Msa0763480:exon |
| TGAAACTAACAAAACCGGAT+CGG | 0.630831 | 5_2:-22707239 | None:intergenic |
| CAGATGATGGGACCACCGCA+AGG | 0.633320 | 5_2:+22710265 | Msa0763480:CDS |
| CCGACAAAATACTCTTCCAA+AGG | 0.637110 | 5_2:-22711871 | None:intergenic |
| AGGGGCGGCCATTGAATATG+CGG | 0.637261 | 5_2:+22709105 | Msa0763480:CDS |
| ATGAAATCAGAAGGAAGACA+TGG | 0.641190 | 5_2:+22706854 | Msa0763480:intron |
| AAATAAAACCTACCTTGCGG+TGG | 0.643471 | 5_2:-22710277 | None:intergenic |
| GAGACCTTAAATGGATACAG+AGG | 0.644330 | 5_2:-22711804 | None:intergenic |
| CTGTACGGTGAACTTGCCAA+AGG | 0.647222 | 5_2:+22707999 | Msa0763480:CDS |
| CGTGAAGATCAAGGAGCTGA+CGG | 0.657927 | 5_2:+22707167 | Msa0763480:CDS |
| ACGGCGGAGTTAGAGGCCAA+CGG | 0.658529 | 5_2:+22707186 | Msa0763480:CDS |
| GCTGCTGTGGAGGCATAAAG+GGG | 0.658582 | 5_2:+22710229 | Msa0763480:CDS |
| GGCGATGTTACGGACCACAA+AGG | 0.665172 | 5_2:-22708427 | None:intergenic |
| AGACCTTAAATGGATACAGA+GGG | 0.665185 | 5_2:-22711803 | None:intergenic |
| GTGTGTGCCTAAACATACAA+GGG | 0.684916 | 5_2:-22702622 | None:intergenic |
| GAAGATCAAGGAGCTGACGG+CGG | 0.707015 | 5_2:+22707170 | Msa0763480:CDS |
| CAGCTCCTTGATCTTCACGG+CGG | 0.827966 | 5_2:-22707163 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+CGG | - | chr5_2:22705014-22705033 | None:intergenic | 0.0% |
| !! | ATATTATTATTATTATTATA+TGG | + | chr5_2:22709198-22709217 | Msa0763480:intron | 0.0% |
| !! | AATAAAAAAAATTAATAGAG+TGG | - | chr5_2:22704034-22704053 | None:intergenic | 10.0% |
| !!! | CTTTTTGTTTTTATAATTTT+GGG | + | chr5_2:22704467-22704486 | Msa0763480:intron | 10.0% |
| !! | GTGTATATTAATTTAATTAA+TGG | + | chr5_2:22704587-22704606 | Msa0763480:intron | 10.0% |
| !!! | TTAATCTTTTTATATATTTG+GGG | - | chr5_2:22705486-22705505 | None:intergenic | 10.0% |
| !! | TACTTTATTATCATAATAAT+GGG | - | chr5_2:22706014-22706033 | None:intergenic | 10.0% |
| !! | TATGTTTATCATTTAAAAAA+AGG | + | chr5_2:22706046-22706065 | Msa0763480:intron | 10.0% |
| !!! | TTATTACTATATTATTTTCA+GGG | + | chr5_2:22707116-22707135 | Msa0763480:intron | 10.0% |
| !!! | TAAATATATTACACTTTTAT+AGG | - | chr5_2:22708543-22708562 | None:intergenic | 10.0% |
| !! | ATAATATAAGATAAAGTATA+TGG | - | chr5_2:22709185-22709204 | None:intergenic | 10.0% |
| !! | TTATTATTATTATTATATGG+TGG | + | chr5_2:22709201-22709220 | Msa0763480:intron | 10.0% |
| !! | TATTATTATTATTATATGGT+GGG | + | chr5_2:22709202-22709221 | Msa0763480:intron | 10.0% |
| !! | TCACAATTAAATTATATTAA+TGG | - | chr5_2:22710514-22710533 | None:intergenic | 10.0% |
| !!! | ATATGATTCTTTTTTTATTA+AGG | + | chr5_2:22710745-22710764 | Msa0763480:intron | 10.0% |
| !! | AAAAAAAATCTTAAATTTGT+TGG | + | chr5_2:22711574-22711593 | Msa0763480:intron | 10.0% |
| !!! | CAAAATACTTATTTTATTAG+TGG | + | chr5_2:22703140-22703159 | Msa0763480:intron | 15.0% |
| !! | AATTATTTACATCAAAATGT+TGG | - | chr5_2:22703216-22703235 | None:intergenic | 15.0% |
| !!! | TAAATAGAACCAAATTATTT+TGG | - | chr5_2:22703392-22703411 | None:intergenic | 15.0% |
| !!! | TATCAAGATAATTTTGATAA+TGG | - | chr5_2:22703654-22703673 | None:intergenic | 15.0% |
| !!! | CTATTCTACATTTTTTTTTT+TGG | - | chr5_2:22704173-22704192 | None:intergenic | 15.0% |
| !!! | AGAAGAATGATTATTTATTT+TGG | - | chr5_2:22704407-22704426 | None:intergenic | 15.0% |
| !! | AAATTATAAAAACAAAAAGG+CGG | - | chr5_2:22704466-22704485 | None:intergenic | 15.0% |
| !! | CCAAAATTATAAAAACAAAA+AGG | - | chr5_2:22704469-22704488 | None:intergenic | 15.0% |
| !!! | CCTTTTTGTTTTTATAATTT+TGG | + | chr5_2:22704466-22704485 | Msa0763480:intron | 15.0% |
| !!! | TATTTTTGACACAATAATAT+AGG | - | chr5_2:22704646-22704665 | None:intergenic | 15.0% |
| !!! | ATACGTTTTTTTTTAAAAGA+TGG | + | chr5_2:22704885-22704904 | Msa0763480:intron | 15.0% |
| !!! | CACATTATTTTTATTTTAGT+TGG | + | chr5_2:22705177-22705196 | Msa0763480:intron | 15.0% |
| !!! | AATAGCTTTTTTATCTAATA+AGG | - | chr5_2:22705269-22705288 | None:intergenic | 15.0% |
| !! | ATTAAATAATTAACGTAAAG+TGG | + | chr5_2:22705501-22705520 | Msa0763480:intron | 15.0% |
| !!! | ATAAACTTTTTTTTTGGTAT+TGG | - | chr5_2:22705634-22705653 | None:intergenic | 15.0% |
| !! | CATTTAAAAGAAATTGAAAT+TGG | - | chr5_2:22705699-22705718 | None:intergenic | 15.0% |
| !!! | ATATCTTGTTTACAAATTAA+AGG | - | chr5_2:22705931-22705950 | None:intergenic | 15.0% |
| !! | CTACTTTATTATCATAATAA+TGG | - | chr5_2:22706015-22706034 | None:intergenic | 15.0% |
| !! | TTTAAAAACAAAAAACTTAG+TGG | - | chr5_2:22706087-22706106 | None:intergenic | 15.0% |
| !! | ATAATATAGTAATAACGAAA+CGG | - | chr5_2:22707111-22707130 | None:intergenic | 15.0% |
| !!! | GTTATTACTATATTATTTTC+AGG | + | chr5_2:22707115-22707134 | Msa0763480:intron | 15.0% |
| !! | GATATATTTGGTTAAAAAAT+TGG | - | chr5_2:22707623-22707642 | None:intergenic | 15.0% |
| !! | TCAACAAAAATAGATATATT+TGG | - | chr5_2:22707635-22707654 | None:intergenic | 15.0% |
| !! | ATATTTCTTGTAAATAAGAT+CGG | + | chr5_2:22707660-22707679 | Msa0763480:intron | 15.0% |
| !! | ATAGGTATATTATATATCAA+AGG | - | chr5_2:22708205-22708224 | None:intergenic | 15.0% |
| !!! | TAGTAGATATTTTTCATTAT+AGG | - | chr5_2:22708223-22708242 | None:intergenic | 15.0% |
| !!! | AAACTTAAAACTGTTTTATT+AGG | - | chr5_2:22708851-22708870 | None:intergenic | 15.0% |
| !!! | AGTAAAATAACATAACATTT+TGG | + | chr5_2:22709390-22709409 | Msa0763480:intron | 15.0% |
| !!! | ATTTATATAAACACATTTTC+AGG | - | chr5_2:22709960-22709979 | None:intergenic | 15.0% |
| !! | ATAAAAAAGTAAAATGCTAT+TGG | - | chr5_2:22710152-22710171 | None:intergenic | 15.0% |
| !! | TTATTTATTATTATGTTCCT+TGG | + | chr5_2:22710294-22710313 | Msa0763480:intron | 15.0% |
| !! | CAATTAAATTATATTAATGG+TGG | - | chr5_2:22710511-22710530 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr5_2:22711178-22711197 | Msa0763480:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr5_2:22711179-22711198 | Msa0763480:intron | 15.0% |
| !! | TAAAATGAATAAGTTAAGTA+GGG | - | chr5_2:22711528-22711547 | None:intergenic | 15.0% |
| !! | ATAAAATGAATAAGTTAAGT+AGG | - | chr5_2:22711529-22711548 | None:intergenic | 15.0% |
| !! | CAATGTAACTAAAATATGAT+TGG | - | chr5_2:22702710-22702729 | None:intergenic | 20.0% |
| !!! | CAATCATATTTTAGTTACAT+TGG | + | chr5_2:22702708-22702727 | Msa0763480:five_prime_UTR | 20.0% |
| !!! | TTTCAATTTTTACTTGTTTC+TGG | + | chr5_2:22702788-22702807 | Msa0763480:intron | 20.0% |
| !!! | ATGAAAAAAGTATTCATATG+GGG | - | chr5_2:22703261-22703280 | None:intergenic | 20.0% |
| !!! | GATGAAAAAAGTATTCATAT+GGG | - | chr5_2:22703262-22703281 | None:intergenic | 20.0% |
| !! | TTTCCATAACCAAAATAATT+TGG | + | chr5_2:22703380-22703399 | Msa0763480:intron | 20.0% |
| !!! | CATTTGTCGATTAAAAATTT+AGG | - | chr5_2:22703721-22703740 | None:intergenic | 20.0% |
| !! | TACATTATTTCCTATGTAAT+GGG | - | chr5_2:22704005-22704024 | None:intergenic | 20.0% |
| !! | AAAAAAATTAATAGAGTGGA+GGG | - | chr5_2:22704030-22704049 | None:intergenic | 20.0% |
| !! | AAAAAAAATTAATAGAGTGG+AGG | - | chr5_2:22704031-22704050 | None:intergenic | 20.0% |
| !!! | TAAAAGACATTTTCAATGTA+AGG | - | chr5_2:22704226-22704245 | None:intergenic | 20.0% |
| !!! | ACATTGAAAATGTCTTTTAT+TGG | + | chr5_2:22704227-22704246 | Msa0763480:intron | 20.0% |
| !!! | TGTAGTGTTCATAATTATTT+TGG | + | chr5_2:22704921-22704940 | Msa0763480:intron | 20.0% |
| !!! | CTAAGATAGTCAAAATTTTA+TGG | - | chr5_2:22705149-22705168 | None:intergenic | 20.0% |
| !!! | TTTTTTGTAGTGATTTTAGT+AGG | + | chr5_2:22705205-22705224 | Msa0763480:intron | 20.0% |
| !!! | AGTAGGTAATTTTTTTTAGT+AGG | + | chr5_2:22705222-22705241 | Msa0763480:intron | 20.0% |
| !! | ATTGATTATTGAGTCAAAAA+GGG | - | chr5_2:22705382-22705401 | None:intergenic | 20.0% |
| !!! | TATTGATTATTGAGTCAAAA+AGG | - | chr5_2:22705383-22705402 | None:intergenic | 20.0% |
| !!! | AATGACATGCTAATTTTTTT+AGG | + | chr5_2:22705715-22705734 | Msa0763480:intron | 20.0% |
| !! | ACTAACATAACAATTAACAT+AGG | - | chr5_2:22705805-22705824 | None:intergenic | 20.0% |
| !!! | TATTTTCAAAGTGAATAAGT+CGG | + | chr5_2:22706129-22706148 | Msa0763480:intron | 20.0% |
| !!! | AATATATATGAATTTTGACG+CGG | - | chr5_2:22706425-22706444 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTATGAAATCAGA+AGG | + | chr5_2:22706845-22706864 | Msa0763480:intron | 20.0% |
| !!! | CAACTGTTAATTTTAATTCA+AGG | - | chr5_2:22707402-22707421 | None:intergenic | 20.0% |
| !!! | ACATAAAAATTTGCTTAACT+TGG | + | chr5_2:22707907-22707926 | Msa0763480:intron | 20.0% |
| !! | TTGAATTTATTGAATTCACA+TGG | + | chr5_2:22708644-22708663 | Msa0763480:intron | 20.0% |
| !!! | TTGCTTCTTTGTATATATTT+TGG | + | chr5_2:22708788-22708807 | Msa0763480:intron | 20.0% |
| !! | TATCAAAGATAAAATGATGT+TGG | - | chr5_2:22708818-22708837 | None:intergenic | 20.0% |
| !!! | TCAAAGTTATATCTTCATTT+TGG | + | chr5_2:22709004-22709023 | Msa0763480:intron | 20.0% |
| !!! | TCAATATGTGTATCTTTTAT+AGG | + | chr5_2:22709537-22709556 | Msa0763480:intron | 20.0% |
| !!! | GTATCTTTTATAGGTTTTTA+TGG | + | chr5_2:22709546-22709565 | Msa0763480:intron | 20.0% |
| !!! | TTTACAAGACCATTTTTTAA+GGG | + | chr5_2:22709766-22709785 | Msa0763480:intron | 20.0% |
| !! | CTAATTTAACCCTTAAAAAA+TGG | - | chr5_2:22709778-22709797 | None:intergenic | 20.0% |
| !!! | GCATTTTACTTTTTTATGTT+TGG | + | chr5_2:22710155-22710174 | Msa0763480:intron | 20.0% |
| !!! | TTCTAAAAATTATGTCATAC+AGG | + | chr5_2:22710179-22710198 | Msa0763480:intron | 20.0% |
| !!! | AATTTGAGTTATCATCTTTT+AGG | - | chr5_2:22710354-22710373 | None:intergenic | 20.0% |
| !!! | TTTTTTCTCTAATTTGTTCT+TGG | - | chr5_2:22710621-22710640 | None:intergenic | 20.0% |
| !! | AAAAGTGGAATATATTGTAT+TGG | + | chr5_2:22711202-22711221 | Msa0763480:intron | 20.0% |
| !! | TATTTAGTGTTATATTGCAT+TGG | + | chr5_2:22711243-22711262 | Msa0763480:intron | 20.0% |
| !! | ATTTAGTGTTATATTGCATT+GGG | + | chr5_2:22711244-22711263 | Msa0763480:intron | 20.0% |
| !!! | TTGAAATGAGTCAATTATTT+TGG | + | chr5_2:22711290-22711309 | Msa0763480:intron | 20.0% |
| !!! | TGAAATGAGTCAATTATTTT+GGG | + | chr5_2:22711291-22711310 | Msa0763480:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | + | chr5_2:22711313-22711332 | Msa0763480:intron | 20.0% |
| !!! | AATTTCATTTTAAGGATATG+TGG | + | chr5_2:22712038-22712057 | Msa0763480:three_prime_UTR | 20.0% |
| !!! | ATTTCATTTTAAGGATATGT+GGG | + | chr5_2:22712039-22712058 | Msa0763480:three_prime_UTR | 20.0% |
| ! | GGAATGAAAATGAATTTGAA+GGG | - | chr5_2:22702604-22702623 | None:intergenic | 25.0% |
| ! | TAAAATATGATTGGAGAGAT+TGG | - | chr5_2:22702701-22702720 | None:intergenic | 25.0% |
| ! | TGTATCAAACAGTAAATAGT+TGG | - | chr5_2:22702756-22702775 | None:intergenic | 25.0% |
| ! | GTTTATTAACAAATCGTTGA+GGG | - | chr5_2:22702996-22703015 | None:intergenic | 25.0% |
| ! | AGTTTATTAACAAATCGTTG+AGG | - | chr5_2:22702997-22703016 | None:intergenic | 25.0% |
| ! | ATGTCTTAAGACAATTTGTA+AGG | - | chr5_2:22703113-22703132 | None:intergenic | 25.0% |
| ! | TTTATTAGTGGAAATGAGAA+AGG | + | chr5_2:22703152-22703171 | Msa0763480:intron | 25.0% |
| ! | TACATCAAAATGTTGGAAAA+TGG | - | chr5_2:22703209-22703228 | None:intergenic | 25.0% |
| !!! | TGAAAAAAGTATTCATATGG+GGG | - | chr5_2:22703260-22703279 | None:intergenic | 25.0% |
| !!! | GGATGAAAAAAGTATTCATA+TGG | - | chr5_2:22703263-22703282 | None:intergenic | 25.0% |
| ! | AATTTACTATCAAAAGCAAG+CGG | - | chr5_2:22703284-22703303 | None:intergenic | 25.0% |
| !!! | AACGTTTCTTATTCTAAAGT+AGG | + | chr5_2:22703304-22703323 | Msa0763480:intron | 25.0% |
| ! | AAATTGCTATGTATTTCGTT+GGG | - | chr5_2:22703363-22703382 | None:intergenic | 25.0% |
| !!! | GAACCAAATTATTTTGGTTA+TGG | - | chr5_2:22703386-22703405 | None:intergenic | 25.0% |
| ! | AATTCAATGTGTTAACAATG+GGG | - | chr5_2:22703855-22703874 | None:intergenic | 25.0% |
| ! | CAATTCAATGTGTTAACAAT+GGG | - | chr5_2:22703856-22703875 | None:intergenic | 25.0% |
| ! | TCAATTCAATGTGTTAACAA+TGG | - | chr5_2:22703857-22703876 | None:intergenic | 25.0% |
| ! | GATTAACAACTTGAAGATAA+GGG | - | chr5_2:22703955-22703974 | None:intergenic | 25.0% |
| ! | AGATTAACAACTTGAAGATA+AGG | - | chr5_2:22703956-22703975 | None:intergenic | 25.0% |
| ! | GTACATTATTTCCTATGTAA+TGG | - | chr5_2:22704006-22704025 | None:intergenic | 25.0% |
| !! | AAATGTCTTTTATTGGATTG+TGG | + | chr5_2:22704234-22704253 | Msa0763480:intron | 25.0% |
| !!! | TGTTTTTCTCATTTTTGTTG+AGG | + | chr5_2:22704338-22704357 | Msa0763480:intron | 25.0% |
| ! | TAATCAATAATTTACTGCCA+TGG | + | chr5_2:22705394-22705413 | Msa0763480:intron | 25.0% |
| ! | GCATAAAAATATGCAAAGTT+CGG | + | chr5_2:22705594-22705613 | Msa0763480:intron | 25.0% |
| ! | CATAAAAATATGCAAAGTTC+GGG | + | chr5_2:22705595-22705614 | Msa0763480:intron | 25.0% |
| ! | ATAAAAATATGCAAAGTTCG+GGG | + | chr5_2:22705596-22705615 | Msa0763480:intron | 25.0% |
| ! | ACTCAAATGATTAATCACTA+CGG | - | chr5_2:22705967-22705986 | None:intergenic | 25.0% |
| !!! | TCTTTTAGTTGTTTAACTTG+TGG | - | chr5_2:22706216-22706235 | None:intergenic | 25.0% |
| ! | AACAACAAAATCATGTGATA+CGG | - | chr5_2:22706790-22706809 | None:intergenic | 25.0% |
| !!! | TCAATTTTCATTTGATAACG+CGG | + | chr5_2:22707019-22707038 | Msa0763480:intron | 25.0% |
| !!! | TGTTATTGTTACTTTCATGT+GGG | + | chr5_2:22707055-22707074 | Msa0763480:intron | 25.0% |
| !! | GGATCATGTTTTACTTTATT+TGG | + | chr5_2:22707313-22707332 | Msa0763480:intron | 25.0% |
| !! | TTTATTTGGTTTCGTACTTA+CGG | + | chr5_2:22707327-22707346 | Msa0763480:intron | 25.0% |
| ! | TCATAAGTAACTATTCCAAT+TGG | + | chr5_2:22707368-22707387 | Msa0763480:intron | 25.0% |
| !! | TTCAAGGAATTTTATCCAAT+TGG | - | chr5_2:22707386-22707405 | None:intergenic | 25.0% |
| ! | TGTATTCATGAATTAGTAGT+AGG | - | chr5_2:22707426-22707445 | None:intergenic | 25.0% |
| !! | TATTTTATGATCAATGCATC+TGG | + | chr5_2:22708177-22708196 | Msa0763480:intron | 25.0% |
| !! | ATTTTATGATCAATGCATCT+GGG | + | chr5_2:22708178-22708197 | Msa0763480:intron | 25.0% |
| !! | AGTATAAAGTCGTTCTTTTA+TGG | + | chr5_2:22708293-22708312 | Msa0763480:intron | 25.0% |
| !! | TTTTTCTTAATGCAATAAGG+TGG | - | chr5_2:22708495-22708514 | None:intergenic | 25.0% |
| !!! | GACTTTTTCTTAATGCAATA+AGG | - | chr5_2:22708498-22708517 | None:intergenic | 25.0% |
| ! | TATTCTATTGCATCATTTGT+TGG | + | chr5_2:22709276-22709295 | Msa0763480:intron | 25.0% |
| ! | ATTCTATTGCATCATTTGTT+GGG | + | chr5_2:22709277-22709296 | Msa0763480:intron | 25.0% |
| ! | TCATATCTTATCGTGTATTA+CGG | + | chr5_2:22709320-22709339 | Msa0763480:intron | 25.0% |
| ! | GTCTACTTCTTAAGTTTATA+TGG | + | chr5_2:22709632-22709651 | Msa0763480:intron | 25.0% |
| ! | TACTTGTCTTATGTTTGATT+CGG | + | chr5_2:22709701-22709720 | Msa0763480:intron | 25.0% |
| !! | CTACTAATAAACTCATTTTC+AGG | - | chr5_2:22709732-22709751 | None:intergenic | 25.0% |
| !!! | CTTTACAAGACCATTTTTTA+AGG | + | chr5_2:22709765-22709784 | Msa0763480:intron | 25.0% |
| ! | TTAGACCTTAAATTATACCA+TGG | + | chr5_2:22709794-22709813 | Msa0763480:intron | 25.0% |
| ! | GTCGATCATTATAAAATGAA+CGG | - | chr5_2:22709997-22710016 | None:intergenic | 25.0% |
| ! | AAATTCTCAAGGTTGTAAAT+GGG | - | chr5_2:22710070-22710089 | None:intergenic | 25.0% |
| ! | TCAATTTCTTCAAATTCTCA+AGG | - | chr5_2:22710081-22710100 | None:intergenic | 25.0% |
| ! | GTTGAGAATATTGTAGTTAT+TGG | + | chr5_2:22710201-22710220 | Msa0763480:CDS | 25.0% |
| ! | AATAAATAAAACCTACCTTG+CGG | - | chr5_2:22710283-22710302 | None:intergenic | 25.0% |
| ! | TCTTTATAAGAGATATTCCA+AGG | - | chr5_2:22710314-22710333 | None:intergenic | 25.0% |
| ! | TGGAATATCTCTTATAAAGA+AGG | + | chr5_2:22710314-22710333 | Msa0763480:intron | 25.0% |
| ! | ATTTCAACTATGAGATGAAA+GGG | - | chr5_2:22710463-22710482 | None:intergenic | 25.0% |
| !!! | TATTCCTTTTGATTAACCAA+CGG | - | chr5_2:22710568-22710587 | None:intergenic | 25.0% |
| !! | TAGTTTTTGCAGAATCATAT+TGG | + | chr5_2:22711001-22711020 | Msa0763480:intron | 25.0% |
| ! | TAGTGAATGTGTTAGAATTA+CGG | - | chr5_2:22711031-22711050 | None:intergenic | 25.0% |
| ! | TTCACTATGATACAAAACTT+AGG | + | chr5_2:22711044-22711063 | Msa0763480:intron | 25.0% |
| !!! | GAGTCATTTTTCTTATGTTA+CGG | - | chr5_2:22711079-22711098 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGAAAAG+TGG | + | chr5_2:22711187-22711206 | Msa0763480:intron | 25.0% |
| !!! | ACTTGTTTCTAATTTAACCT+TGG | - | chr5_2:22711440-22711459 | None:intergenic | 25.0% |
| !! | GCACATTACAATTTTGTTAA+TGG | + | chr5_2:22711743-22711762 | Msa0763480:CDS | 25.0% |
| GGGAATGAAAATGAATTTGA+AGG | - | chr5_2:22702605-22702624 | None:intergenic | 30.0% | |
| TTTCATTCCCTTGTATGTTT+AGG | + | chr5_2:22702615-22702634 | Msa0763480:five_prime_UTR | 30.0% | |
| TAACTAGAGAAAATGCAGTT+TGG | + | chr5_2:22702872-22702891 | Msa0763480:intron | 30.0% | |
| AACTAGAGAAAATGCAGTTT+GGG | + | chr5_2:22702873-22702892 | Msa0763480:intron | 30.0% | |
| TAAACATTAGAGGAGACATT+AGG | - | chr5_2:22702948-22702967 | None:intergenic | 30.0% | |
| TGTCGTCAAATAAACATTAG+AGG | - | chr5_2:22702958-22702977 | None:intergenic | 30.0% | |
| GAAATTGCTATGTATTTCGT+TGG | - | chr5_2:22703364-22703383 | None:intergenic | 30.0% | |
| CCATCTTAGCATAAAAAAAG+AGG | - | chr5_2:22703599-22703618 | None:intergenic | 30.0% | |
| !!! | CCTCTTTTTTTATGCTAAGA+TGG | + | chr5_2:22703596-22703615 | Msa0763480:intron | 30.0% |
| AAATATACCTACTCTTGGTA+AGG | - | chr5_2:22703911-22703930 | None:intergenic | 30.0% | |
| AGAAAAAACAAAGTGGAATC+TGG | - | chr5_2:22704553-22704572 | None:intergenic | 30.0% | |
| ACTAGCTAGAAAAAACAAAG+TGG | - | chr5_2:22704560-22704579 | None:intergenic | 30.0% | |
| TTGTGTCAAAAATACCTCTA+TGG | + | chr5_2:22704652-22704671 | Msa0763480:intron | 30.0% | |
| ! | ATTCTTAAACACCTTCGTTT+TGG | - | chr5_2:22704679-22704698 | None:intergenic | 30.0% |
| TATATATACGGTCAACAGTT+TGG | - | chr5_2:22705002-22705021 | None:intergenic | 30.0% | |
| GGTCAAAAGTGATAAATAAC+TGG | - | chr5_2:22705128-22705147 | None:intergenic | 30.0% | |
| ! | AAGAGATTTCTCTTTTTCCA+TGG | - | chr5_2:22705414-22705433 | None:intergenic | 30.0% |
| ! | ATATATTTGGGGTCAAATCT+TGG | - | chr5_2:22705475-22705494 | None:intergenic | 30.0% |
| !!! | ACTTTTTTTTTGGTATTGGC+CGG | - | chr5_2:22705630-22705649 | None:intergenic | 30.0% |
| AAAAACTTAGTGGTACAAGT+TGG | - | chr5_2:22706077-22706096 | None:intergenic | 30.0% | |
| AAAACACACACCAAAAAACA+AGG | + | chr5_2:22706491-22706510 | Msa0763480:intron | 30.0% | |
| !! | ATTTGATTTGAATCTGGTGT+TGG | - | chr5_2:22706551-22706570 | None:intergenic | 30.0% |
| !! | AGCATGATTTGATTTGAATC+TGG | - | chr5_2:22706557-22706576 | None:intergenic | 30.0% |
| GATACGGTAACATAAATGAA+CGG | - | chr5_2:22706774-22706793 | None:intergenic | 30.0% | |
| ! | TTTTTCTTACTTGAGAAGTC+TGG | - | chr5_2:22706916-22706935 | None:intergenic | 30.0% |
| !! | CTGTTATTGTTACTTTCATG+TGG | + | chr5_2:22707054-22707073 | Msa0763480:intron | 30.0% |
| ! | TTACATTACACGGTTTGTTT+GGG | - | chr5_2:22707082-22707101 | None:intergenic | 30.0% |
| AGTCTTGAAACTAACAAAAC+CGG | - | chr5_2:22707247-22707266 | None:intergenic | 30.0% | |
| ! | AGTACATTTTACTGAGATGT+TGG | + | chr5_2:22707938-22707957 | Msa0763480:intron | 30.0% |
| TAATAGAATAGCTGACCTTA+GGG | - | chr5_2:22708031-22708050 | None:intergenic | 30.0% | |
| GCTATTCTATTACTAGTACT+TGG | + | chr5_2:22708039-22708058 | Msa0763480:intron | 30.0% | |
| GTAATTAGTGTAAACGGAAA+TGG | - | chr5_2:22708066-22708085 | None:intergenic | 30.0% | |
| GAAAAGTAAACCTTGTCATA+TGG | - | chr5_2:22708465-22708484 | None:intergenic | 30.0% | |
| TTGAATTCACATGGTGTAAA+AGG | + | chr5_2:22708653-22708672 | Msa0763480:intron | 30.0% | |
| ATACAAAGAAGCAATGATGT+TGG | - | chr5_2:22708782-22708801 | None:intergenic | 30.0% | |
| ATATGCGGTCTTACATTTAA+AGG | + | chr5_2:22709120-22709139 | Msa0763480:CDS | 30.0% | |
| GAATACTTAACAATGTCAGA+TGG | - | chr5_2:22709261-22709280 | None:intergenic | 30.0% | |
| CATATCTTATCGTGTATTAC+GGG | + | chr5_2:22709321-22709340 | Msa0763480:intron | 30.0% | |
| TTTGGTTATTGAAATCGTAG+TGG | + | chr5_2:22709408-22709427 | Msa0763480:intron | 30.0% | |
| CACAACATTTAATGTAGTGT+CGG | + | chr5_2:22709483-22709502 | Msa0763480:intron | 30.0% | |
| TGGTACCATGGTATAATTTA+AGG | - | chr5_2:22709802-22709821 | None:intergenic | 30.0% | |
| !!! | AATGAACTTTTGACGGATTT+TGG | - | chr5_2:22709822-22709841 | None:intergenic | 30.0% |
| ! | GTGTCTTAATGAACTTTTGA+CGG | - | chr5_2:22709829-22709848 | None:intergenic | 30.0% |
| TCTTATCATTGATCATGCTT+AGG | - | chr5_2:22709905-22709924 | None:intergenic | 30.0% | |
| CAAATTCTCAAGGTTGTAAA+TGG | - | chr5_2:22710071-22710090 | None:intergenic | 30.0% | |
| CATTTCAACTATGAGATGAA+AGG | - | chr5_2:22710464-22710483 | None:intergenic | 30.0% | |
| AATCAAAAGGAATAACCTCT+TGG | + | chr5_2:22710574-22710593 | Msa0763480:intron | 30.0% | |
| ! | ACCTCTTGGAAAATTTTCTA+TGG | + | chr5_2:22710588-22710607 | Msa0763480:intron | 30.0% |
| ! | CCTCTTGGAAAATTTTCTAT+GGG | + | chr5_2:22710589-22710608 | Msa0763480:intron | 30.0% |
| CAATAACTAGTTAGTAAGTG+AGG | - | chr5_2:22710794-22710813 | None:intergenic | 30.0% | |
| CTCACTTACTAACTAGTTAT+TGG | + | chr5_2:22710792-22710811 | Msa0763480:intron | 30.0% | |
| AAATGACTCACAATTCTTCT+TGG | + | chr5_2:22711090-22711109 | Msa0763480:intron | 30.0% | |
| AGAAAATAGGTCAGTTATTC+CGG | + | chr5_2:22711326-22711345 | Msa0763480:intron | 30.0% | |
| TAAGTTAAGTAGGGTTTGAT+TGG | - | chr5_2:22711519-22711538 | None:intergenic | 30.0% | |
| TATATACTGCAAGTTCACTT+TGG | - | chr5_2:22711837-22711856 | None:intergenic | 30.0% | |
| TATCATCAACATTAGTCCTT+TGG | + | chr5_2:22711855-22711874 | Msa0763480:three_prime_UTR | 30.0% | |
| !!! | AGTATTTTGTCGGTTCTAAT+TGG | + | chr5_2:22711881-22711900 | Msa0763480:three_prime_UTR | 30.0% |
| AATGTATGTTTCTTTCTCGA+TGG | - | chr5_2:22711912-22711931 | None:intergenic | 30.0% | |
| GTGAGTAAATATTCTCACAT+TGG | + | chr5_2:22712111-22712130 | Msa0763480:three_prime_UTR | 30.0% | |
| ATCTTCTTCACCTTTACTTG+TGG | + | chr5_2:22702435-22702454 | Msa0763480:five_prime_UTR | 35.0% | |
| TGTTCTTAAGCCACAAGTAA+AGG | - | chr5_2:22702448-22702467 | None:intergenic | 35.0% | |
| TGTGAGTTAATAGCAGCATT+GGG | - | chr5_2:22702537-22702556 | None:intergenic | 35.0% | |
| ATGTGAGTTAATAGCAGCAT+TGG | - | chr5_2:22702538-22702557 | None:intergenic | 35.0% | |
| TATGCAAAGCACACATGAAA+AGG | - | chr5_2:22702575-22702594 | None:intergenic | 35.0% | |
| CAAACAGTAAATAGTTGGAG+AGG | - | chr5_2:22702751-22702770 | None:intergenic | 35.0% | |
| AAGGAAACACCAACAGTAAA+TGG | + | chr5_2:22703171-22703190 | Msa0763480:intron | 35.0% | |
| AGGAAACACCAACAGTAAAT+GGG | + | chr5_2:22703172-22703191 | Msa0763480:intron | 35.0% | |
| ! | TACATATAAGTTGGACTTGG+AGG | - | chr5_2:22703330-22703349 | None:intergenic | 35.0% |
| ! | AGCTACATATAAGTTGGACT+TGG | - | chr5_2:22703333-22703352 | None:intergenic | 35.0% |
| CAACTTATATGTAGCTCCAA+GGG | + | chr5_2:22703337-22703356 | Msa0763480:intron | 35.0% | |
| ! | TTTTTCTGCAAATGCAAAGC+AGG | + | chr5_2:22703433-22703452 | Msa0763480:intron | 35.0% |
| ! | TTTTCTGCAAATGCAAAGCA+GGG | + | chr5_2:22703434-22703453 | Msa0763480:intron | 35.0% |
| AAGAGGACCAAAGAGATAAA+TGG | + | chr5_2:22703459-22703478 | Msa0763480:exon | 35.0% | |
| CTAAGATGGAGCAAAAGAAA+TGG | + | chr5_2:22703610-22703629 | Msa0763480:intron | 35.0% | |
| TCACAATACATAGTCCTACA+AGG | + | chr5_2:22703879-22703898 | Msa0763480:intron | 35.0% | |
| GGACAAAATATACCTACTCT+TGG | - | chr5_2:22703916-22703935 | None:intergenic | 35.0% | |
| AAGGGAACACATAAAGCAAT+AGG | - | chr5_2:22703937-22703956 | None:intergenic | 35.0% | |
| ! | TTTCCTATGTAATGGGAAGA+TGG | - | chr5_2:22703998-22704017 | None:intergenic | 35.0% |
| AAAAACAAAAAGGCGGTGTA+AGG | - | chr5_2:22704459-22704478 | None:intergenic | 35.0% | |
| AAAACAAAGTGGAATCTGGT+GGG | - | chr5_2:22704549-22704568 | None:intergenic | 35.0% | |
| AAAAACAAAGTGGAATCTGG+TGG | - | chr5_2:22704550-22704569 | None:intergenic | 35.0% | |
| ! | TTCTTAAACACCTGCGTTTT+TGG | - | chr5_2:22704622-22704641 | None:intergenic | 35.0% |
| ATTATTGAGTCAAAAAGGGC+AGG | - | chr5_2:22705378-22705397 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTGGTATTGGCCG+GGG | - | chr5_2:22705628-22705647 | None:intergenic | 35.0% |
| !!! | CTTTTTTTTTGGTATTGGCC+GGG | - | chr5_2:22705629-22705648 | None:intergenic | 35.0% |
| ! | TCTTGCGATGATTTGAAGTT+TGG | + | chr5_2:22705832-22705851 | Msa0763480:intron | 35.0% |
| AACTTACAAACCGTGATAAG+TGG | + | chr5_2:22706359-22706378 | Msa0763480:intron | 35.0% | |
| ! | GTTTTTCTCTTGTGTGATAC+TGG | - | chr5_2:22706476-22706495 | None:intergenic | 35.0% |
| ! | TGATTTGTGACGTGAATTGT+AGG | - | chr5_2:22706592-22706611 | None:intergenic | 35.0% |
| ATGAAATCAGAAGGAAGACA+TGG | + | chr5_2:22706854-22706873 | Msa0763480:intron | 35.0% | |
| AAATTGACGCTAAAAGACAG+CGG | - | chr5_2:22707006-22707025 | None:intergenic | 35.0% | |
| !!! | ATTTTCATTTGATAACGCGG+AGG | + | chr5_2:22707022-22707041 | Msa0763480:intron | 35.0% |
| ! | GTTACATTACACGGTTTGTT+TGG | - | chr5_2:22707083-22707102 | None:intergenic | 35.0% |
| ACGGAAAACGTTACATTACA+CGG | - | chr5_2:22707092-22707111 | None:intergenic | 35.0% | |
| TGAAACTAACAAAACCGGAT+CGG | - | chr5_2:22707242-22707261 | None:intergenic | 35.0% | |
| ! | TGATTTTACTGTGCGTGTTT+AGG | + | chr5_2:22707287-22707306 | Msa0763480:intron | 35.0% |
| AAAATTTCCCCCTCAACTTA+CGG | - | chr5_2:22707878-22707897 | None:intergenic | 35.0% | |
| ! | ACATTTTACTGAGATGTTGG+TGG | + | chr5_2:22707941-22707960 | Msa0763480:intron | 35.0% |
| ! | CATTTTACTGAGATGTTGGT+GGG | + | chr5_2:22707942-22707961 | Msa0763480:intron | 35.0% |
| GTAATAGAATAGCTGACCTT+AGG | - | chr5_2:22708032-22708051 | None:intergenic | 35.0% | |
| GAACGCGTAATTAGTGTAAA+CGG | - | chr5_2:22708072-22708091 | None:intergenic | 35.0% | |
| TCTCACTAACAGCATTATAG+TGG | + | chr5_2:22708140-22708159 | Msa0763480:intron | 35.0% | |
| TATAGTGCACATGCAGTTTA+TGG | + | chr5_2:22708341-22708360 | Msa0763480:intron | 35.0% | |
| GGAAATCCAAAATGTGAGAA+GGG | - | chr5_2:22708395-22708414 | None:intergenic | 35.0% | |
| TGGAAATCCAAAATGTGAGA+AGG | - | chr5_2:22708396-22708415 | None:intergenic | 35.0% | |
| ! | TCACATTTTGGATTTCCAAC+CGG | + | chr5_2:22708398-22708417 | Msa0763480:CDS | 35.0% |
| AAGTAAACCTTGTCATATGG+TGG | - | chr5_2:22708462-22708481 | None:intergenic | 35.0% | |
| TGAAGTGACTTCAAACATGT+AGG | - | chr5_2:22708687-22708706 | None:intergenic | 35.0% | |
| CTGAATTGAAACACCAAAAC+AGG | - | chr5_2:22709034-22709053 | None:intergenic | 35.0% | |
| ATGTAAGACCGCATATTCAA+TGG | - | chr5_2:22709116-22709135 | None:intergenic | 35.0% | |
| AGTATATGGTGAAGAAAGAG+AGG | - | chr5_2:22709171-22709190 | None:intergenic | 35.0% | |
| !! | TTATTATATGGTGGGTCTCT+TGG | + | chr5_2:22709210-22709229 | Msa0763480:intron | 35.0% |
| TATGAAAATTGAGATGCCTG+TGG | - | chr5_2:22709305-22709324 | None:intergenic | 35.0% | |
| CGACACTACATTAAATGTTG+TGG | - | chr5_2:22709485-22709504 | None:intergenic | 35.0% | |
| ATAACATGATCTATCACCGT+TGG | + | chr5_2:22710549-22710568 | Msa0763480:intron | 35.0% | |
| ! | ATCACCGTTGGTTAATCAAA+AGG | + | chr5_2:22710561-22710580 | Msa0763480:intron | 35.0% |
| ! | CCCATAGAAAATTTTCCAAG+AGG | - | chr5_2:22710592-22710611 | None:intergenic | 35.0% |
| ! | CGCTGTCGTTTAACATTAAA+AGG | - | chr5_2:22710683-22710702 | None:intergenic | 35.0% |
| AGTTAGTAAGTGAGGATTTG+AGG | - | chr5_2:22710786-22710805 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr5_2:22711157-22711176 | None:intergenic | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | + | chr5_2:22711327-22711346 | Msa0763480:intron | 35.0% | |
| ACAGTGATTTCATTGAGCAA+TGG | + | chr5_2:22711389-22711408 | Msa0763480:intron | 35.0% | |
| CAGTGATTTCATTGAGCAAT+GGG | + | chr5_2:22711390-22711409 | Msa0763480:intron | 35.0% | |
| TTGCTTCCTAATTCAAATGC+AGG | + | chr5_2:22711634-22711653 | Msa0763480:intron | 35.0% | |
| AAGCTGTGAATGTATCTCTT+GGG | + | chr5_2:22711657-22711676 | Msa0763480:CDS | 35.0% | |
| ACTTATCCATTTGTGAGAGA+TGG | + | chr5_2:22711689-22711708 | Msa0763480:CDS | 35.0% | |
| ! | AAGAAAACCCTTGCTTTGAA+AGG | + | chr5_2:22711719-22711738 | Msa0763480:CDS | 35.0% |
| AGACCTTAAATGGATACAGA+GGG | - | chr5_2:22711806-22711825 | None:intergenic | 35.0% | |
| !!! | CCTTTGGAAGAGTATTTTGT+CGG | + | chr5_2:22711871-22711890 | Msa0763480:three_prime_UTR | 35.0% |
| TAGCACATAGACCTTTAAGT+TGG | + | chr5_2:22712078-22712097 | Msa0763480:three_prime_UTR | 35.0% | |
| TCTCAAGGAACTCAAACAAA+TGG | - | chr5_2:22712225-22712244 | None:intergenic | 35.0% | |
| TGAGTTCCTTGAGAATTTCA+AGG | + | chr5_2:22712231-22712250 | Msa0763480:three_prime_UTR | 35.0% | |
| GAGTTCCTTGAGAATTTCAA+GGG | + | chr5_2:22712232-22712251 | Msa0763480:three_prime_UTR | 35.0% | |
| TGACAATGAGTTTAAACCAG+TGG | + | chr5_2:22712260-22712279 | Msa0763480:three_prime_UTR | 35.0% | |
| TTAAACCAGTGGCTTGAATT+TGG | + | chr5_2:22712271-22712290 | Msa0763480:three_prime_UTR | 35.0% | |
| GTGTGTGCCTAAACATACAA+GGG | - | chr5_2:22702625-22702644 | None:intergenic | 40.0% | |
| TGTGTGTGCCTAAACATACA+AGG | - | chr5_2:22702626-22702645 | None:intergenic | 40.0% | |
| ACAGTAAATAGTTGGAGAGG+TGG | - | chr5_2:22702748-22702767 | None:intergenic | 40.0% | |
| !! | CTTGTTTCTGGTCGTAGAAA+TGG | + | chr5_2:22702800-22702819 | Msa0763480:intron | 40.0% |
| GTTGGAAAATGGAAGACAGA+AGG | - | chr5_2:22703198-22703217 | None:intergenic | 40.0% | |
| CCTTGGAGCTACATATAAGT+TGG | - | chr5_2:22703339-22703358 | None:intergenic | 40.0% | |
| CCAACTTATATGTAGCTCCA+AGG | + | chr5_2:22703336-22703355 | Msa0763480:intron | 40.0% | |
| GACCAAAGAGATAAATGGCT+GGG | + | chr5_2:22703464-22703483 | Msa0763480:exon | 40.0% | |
| ACCAAAGAGATAAATGGCTG+GGG | + | chr5_2:22703465-22703484 | Msa0763480:exon | 40.0% | |
| TTGCACAAGCAAGATTGTCT+CGG | + | chr5_2:22703513-22703532 | Msa0763480:CDS | 40.0% | |
| CAAAAGAAATGGCTTAACGC+AGG | + | chr5_2:22703621-22703640 | Msa0763480:intron | 40.0% | |
| ! | GTGTTAACAATGGGGTACTT+TGG | - | chr5_2:22703847-22703866 | None:intergenic | 40.0% |
| ! | CTATGTAATGGGAAGATGGT+GGG | - | chr5_2:22703994-22704013 | None:intergenic | 40.0% |
| AATGTTGTCTCTAACGTACG+CGG | + | chr5_2:22704264-22704283 | Msa0763480:intron | 40.0% | |
| AGTCACCCAAATAAAAGACG+TGG | - | chr5_2:22704496-22704515 | None:intergenic | 40.0% | |
| AAACAAAGTGGAATCTGGTG+GGG | - | chr5_2:22704548-22704567 | None:intergenic | 40.0% | |
| !! | TTAAACACCTGCGTTTTTGG+AGG | - | chr5_2:22704619-22704638 | None:intergenic | 40.0% |
| !! | CTTAGTGGTACAAGTTGGTA+TGG | - | chr5_2:22706072-22706091 | None:intergenic | 40.0% |
| TTGACGCGGTAGTTATATAG+AGG | - | chr5_2:22706411-22706430 | None:intergenic | 40.0% | |
| GTGTGATACTGGTGAGATTT+GGG | - | chr5_2:22706465-22706484 | None:intergenic | 40.0% | |
| TGTGTGATACTGGTGAGATT+TGG | - | chr5_2:22706466-22706485 | None:intergenic | 40.0% | |
| !!! | AGACGACGAACCTTGTTTTT+TGG | - | chr5_2:22706504-22706523 | None:intergenic | 40.0% |
| ! | TCTCTCTCTCTCTCGATTTT+CGG | + | chr5_2:22706953-22706972 | Msa0763480:intron | 40.0% |
| ! | TTACTGTGCGTGTTTAGGAT+CGG | + | chr5_2:22707292-22707311 | Msa0763480:intron | 40.0% |
| GGTTTCGTACTTACGGAATT+AGG | + | chr5_2:22707334-22707353 | Msa0763480:intron | 40.0% | |
| TCAGGATTCTTCCTGAAAAG+AGG | - | chr5_2:22707978-22707997 | None:intergenic | 40.0% | |
| ! | AGTATGCCCTTCTCACATTT+TGG | + | chr5_2:22708386-22708405 | Msa0763480:CDS | 40.0% |
| ! | CACATTTTGGATTTCCAACC+GGG | + | chr5_2:22708399-22708418 | Msa0763480:CDS | 40.0% |
| TGACTTCAAACATGTAGGTG+GGG | - | chr5_2:22708682-22708701 | None:intergenic | 40.0% | |
| GTGACTTCAAACATGTAGGT+GGG | - | chr5_2:22708683-22708702 | None:intergenic | 40.0% | |
| AGTGACTTCAAACATGTAGG+TGG | - | chr5_2:22708684-22708703 | None:intergenic | 40.0% | |
| ! | TCATTTTGGACTGCCTGTTT+TGG | + | chr5_2:22709018-22709037 | Msa0763480:intron | 40.0% |
| ATTCAGACACAAAGTCTGAC+TGG | + | chr5_2:22709048-22709067 | Msa0763480:intron | 40.0% | |
| !!! | TCTGACTGGCCTTTTTGTTT+TGG | + | chr5_2:22709062-22709081 | Msa0763480:intron | 40.0% |
| CTTGGTCTGCCAAAACAAAA+AGG | - | chr5_2:22709074-22709093 | None:intergenic | 40.0% | |
| !! | GTTTTGGCAGACCAAGTATT+CGG | + | chr5_2:22709078-22709097 | Msa0763480:intron | 40.0% |
| ! | TTTTGGCAGACCAAGTATTC+GGG | + | chr5_2:22709079-22709098 | Msa0763480:intron | 40.0% |
| ATATGGTGAAGAAAGAGAGG+TGG | - | chr5_2:22709168-22709187 | None:intergenic | 40.0% | |
| TCTTCATCCTTGCAATTTCG+CGG | + | chr5_2:22709663-22709682 | Msa0763480:intron | 40.0% | |
| ! | TTTTAGTCCGCGAAATTGCA+AGG | - | chr5_2:22709673-22709692 | None:intergenic | 40.0% |
| !!! | TTTGACGGATTTTGGTACCA+TGG | - | chr5_2:22709814-22709833 | None:intergenic | 40.0% |
| TCATGTCTATCCCAGATGAT+GGG | + | chr5_2:22710253-22710272 | Msa0763480:CDS | 40.0% | |
| AAATAAAACCTACCTTGCGG+TGG | - | chr5_2:22710280-22710299 | None:intergenic | 40.0% | |
| CTGTGAATCAGCAACATACT+TGG | - | chr5_2:22710436-22710455 | None:intergenic | 40.0% | |
| CAAAGTAGGTCAGTTAAACC+GGG | - | chr5_2:22711143-22711162 | None:intergenic | 40.0% | |
| CCAAAGTAGGTCAGTTAAAC+CGG | - | chr5_2:22711144-22711163 | None:intergenic | 40.0% | |
| TCCAAATTTGCAATCCAGCA+AGG | + | chr5_2:22711413-22711432 | Msa0763480:intron | 40.0% | |
| ACCTTGCTGGATTGCAAATT+TGG | - | chr5_2:22711417-22711436 | None:intergenic | 40.0% | |
| AATTTAACCTTGGACCTTGC+TGG | - | chr5_2:22711430-22711449 | None:intergenic | 40.0% | |
| CAGCTTCCTGCATTTGAATT+AGG | - | chr5_2:22711643-22711662 | None:intergenic | 40.0% | |
| GAAGCTGTGAATGTATCTCT+TGG | + | chr5_2:22711656-22711675 | Msa0763480:CDS | 40.0% | |
| ACAACACCATCTCTCACAAA+TGG | - | chr5_2:22711698-22711717 | None:intergenic | 40.0% | |
| ATGTGCTCCTTTCAAAGCAA+GGG | - | chr5_2:22711729-22711748 | None:intergenic | 40.0% | |
| AATGTGCTCCTTTCAAAGCA+AGG | - | chr5_2:22711730-22711749 | None:intergenic | 40.0% | |
| ! | TTAATGGCACTTTTGAGCTG+TGG | + | chr5_2:22711759-22711778 | Msa0763480:CDS | 40.0% |
| ! | TAATGGCACTTTTGAGCTGT+GGG | + | chr5_2:22711760-22711779 | Msa0763480:CDS | 40.0% |
| AAATGGATACAGAGGGCAAA+AGG | - | chr5_2:22711799-22711818 | None:intergenic | 40.0% | |
| TTGCCCTCTGTATCCATTTA+AGG | + | chr5_2:22711800-22711819 | Msa0763480:CDS | 40.0% | |
| GAGACCTTAAATGGATACAG+AGG | - | chr5_2:22711807-22711826 | None:intergenic | 40.0% | |
| CCGACAAAATACTCTTCCAA+AGG | - | chr5_2:22711874-22711893 | None:intergenic | 40.0% | |
| CACTTGACACTCCAACTTAA+AGG | - | chr5_2:22712092-22712111 | None:intergenic | 40.0% | |
| ACTAGCCCTTGAAATTCTCA+AGG | - | chr5_2:22712240-22712259 | None:intergenic | 40.0% | |
| CTAATCCAAATTCAAGCCAC+TGG | - | chr5_2:22712279-22712298 | None:intergenic | 40.0% | |
| ! | TCAGCACCATTTTCATGCAG+AGG | + | chr5_2:22702658-22702677 | Msa0763480:five_prime_UTR | 45.0% |
| ! | CAGCACCATTTTCATGCAGA+GGG | + | chr5_2:22702659-22702678 | Msa0763480:five_prime_UTR | 45.0% |
| ! | AGCACCATTTTCATGCAGAG+GGG | + | chr5_2:22702660-22702679 | Msa0763480:five_prime_UTR | 45.0% |
| TTTGCCCCTCTGCATGAAAA+TGG | - | chr5_2:22702667-22702686 | None:intergenic | 45.0% | |
| GTAAATAGTTGGAGAGGTGG+AGG | - | chr5_2:22702745-22702764 | None:intergenic | 45.0% | |
| CTGGTCGTAGAAATGGCATT+TGG | + | chr5_2:22702807-22702826 | Msa0763480:intron | 45.0% | |
| ACAGAAGGCCCATTTACTGT+TGG | - | chr5_2:22703183-22703202 | None:intergenic | 45.0% | |
| TATGTATTTCGTTGGGCCCT+TGG | - | chr5_2:22703356-22703375 | None:intergenic | 45.0% | |
| AAATGCAAAGCAGGGTGAAG+AGG | + | chr5_2:22703442-22703461 | Msa0763480:intron | 45.0% | |
| GGACCAAAGAGATAAATGGC+TGG | + | chr5_2:22703463-22703482 | Msa0763480:exon | 45.0% | |
| AAGAAATGGCTTAACGCAGG+AGG | + | chr5_2:22703624-22703643 | Msa0763480:intron | 45.0% | |
| ! | CCTATGTAATGGGAAGATGG+TGG | - | chr5_2:22703995-22704014 | None:intergenic | 45.0% |
| CCACCATCTTCCCATTACAT+AGG | + | chr5_2:22703992-22704011 | Msa0763480:intron | 45.0% | |
| AAAAGGCGGTGTAAGGAATC+AGG | - | chr5_2:22704452-22704471 | None:intergenic | 45.0% | |
| !! | GGCCACCACGTCTTTTATTT+GGG | + | chr5_2:22704488-22704507 | Msa0763480:intron | 45.0% |
| CACCCAAATAAAAGACGTGG+TGG | - | chr5_2:22704493-22704512 | None:intergenic | 45.0% | |
| AACAAAGTGGAATCTGGTGG+GGG | - | chr5_2:22704547-22704566 | None:intergenic | 45.0% | |
| ACCTCTATGGTCCAAAACGA+AGG | + | chr5_2:22704665-22704684 | Msa0763480:intron | 45.0% | |
| !! | ACCTTCGTTTTGGACCATAG+AGG | - | chr5_2:22704669-22704688 | None:intergenic | 45.0% |
| AATCAGAAGGAAGACATGGC+TGG | + | chr5_2:22706858-22706877 | Msa0763480:intron | 45.0% | |
| !! | TTCATTTGATAACGCGGAGG+TGG | + | chr5_2:22707025-22707044 | Msa0763480:intron | 45.0% |
| !! | GTTAAACGGCTTTGAACCGT+TGG | - | chr5_2:22707205-22707224 | None:intergenic | 45.0% |
| ATCCTCTCATCCGGGTTAAA+CGG | - | chr5_2:22707219-22707238 | None:intergenic | 45.0% | |
| CCTCAACTTACGGCATAGTT+GGG | - | chr5_2:22707868-22707887 | None:intergenic | 45.0% | |
| ! | CCAACTATGCCGTAAGTTGA+GGG | + | chr5_2:22707866-22707885 | Msa0763480:intron | 45.0% |
| ! | CAACTATGCCGTAAGTTGAG+GGG | + | chr5_2:22707867-22707886 | Msa0763480:intron | 45.0% |
| ! | AACTATGCCGTAAGTTGAGG+GGG | + | chr5_2:22707868-22707887 | Msa0763480:intron | 45.0% |
| AGGAAGAATCCTGAGCTGTA+CGG | + | chr5_2:22707984-22708003 | Msa0763480:intron | 45.0% | |
| GAACCATGTTGGCGATGTTA+CGG | - | chr5_2:22708440-22708459 | None:intergenic | 45.0% | |
| ! | GTCATATGGTGGAACCATGT+TGG | - | chr5_2:22708451-22708470 | None:intergenic | 45.0% |
| CATGGTTCCACCATATGACA+AGG | + | chr5_2:22708452-22708471 | Msa0763480:CDS | 45.0% | |
| CTCTTGGAACAGTGGAAGTT+TGG | + | chr5_2:22709226-22709245 | Msa0763480:intron | 45.0% | |
| GAACAGTGGAAGTTTGGTAG+AGG | + | chr5_2:22709232-22709251 | Msa0763480:intron | 45.0% | |
| ! | CATCATTTGTTGGGATCCAC+AGG | + | chr5_2:22709286-22709305 | Msa0763480:intron | 45.0% |
| CTCATGTCTATCCCAGATGA+TGG | + | chr5_2:22710252-22710271 | Msa0763480:CDS | 45.0% | |
| CCGGTTTAACTGACCTACTT+TGG | + | chr5_2:22711141-22711160 | Msa0763480:intron | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | + | chr5_2:22711331-22711350 | Msa0763480:intron | 45.0% | |
| TATTATTACTCCCTCCGTCC+CGG | - | chr5_2:22711348-22711367 | None:intergenic | 45.0% | |
| GCAGTGCACAAACTGTGAAA+AGG | + | chr5_2:22711477-22711496 | Msa0763480:CDS | 45.0% | |
| ! | GGTGTTGGAGAGACCTTAAA+TGG | - | chr5_2:22711816-22711835 | None:intergenic | 45.0% |
| ! | CTGCAAGTTCACTTTGGTGT+TGG | - | chr5_2:22711831-22711850 | None:intergenic | 45.0% |
| !!! | ATTTTTTATAATATAGTTTA+TGG | + | chr5_2:22704051-22704070 | Msa0763480:intron | 5.0% |
| !! | TAATTGAAAAATTATTTAAT+TGG | + | chr5_2:22704094-22704113 | Msa0763480:intron | 5.0% |
| !! | AAAATTAAAAAACATATATT+GGG | - | chr5_2:22704947-22704966 | None:intergenic | 5.0% |
| !! | TAAAATTAAAAAACATATAT+TGG | - | chr5_2:22704948-22704967 | None:intergenic | 5.0% |
| !!! | TAATTTTATGAAAAATTATT+TGG | + | chr5_2:22704960-22704979 | Msa0763480:intron | 5.0% |
| !!! | TTTAATCTTTTTATATATTT+GGG | - | chr5_2:22705487-22705506 | None:intergenic | 5.0% |
| !!! | ATTTAATCTTTTTATATATT+TGG | - | chr5_2:22705488-22705507 | None:intergenic | 5.0% |
| !!! | TAAAAAATAAACTTTTTTTT+TGG | - | chr5_2:22705640-22705659 | None:intergenic | 5.0% |
| !! | ATAAAAAATTAAAACTAATT+AGG | - | chr5_2:22708103-22708122 | None:intergenic | 5.0% |
| !!! | ATTTTTTTAATTTCATTTTA+AGG | + | chr5_2:22712030-22712049 | Msa0763480:three_prime_UTR | 5.0% |
| GCCCCAGCCATTTATCTCTT+TGG | - | chr5_2:22703469-22703488 | None:intergenic | 50.0% | |
| AAATGGCTTAACGCAGGAGG+AGG | + | chr5_2:22703627-22703646 | Msa0763480:intron | 50.0% | |
| TGGTAAGGCATGTGCCTTGT+AGG | - | chr5_2:22703896-22703915 | None:intergenic | 50.0% | |
| GCACATGCCTTACCAAGAGT+AGG | + | chr5_2:22703901-22703920 | Msa0763480:intron | 50.0% | |
| ! | GGGCCACCACGTCTTTTATT+TGG | + | chr5_2:22704487-22704506 | Msa0763480:intron | 50.0% |
| GTACAAGCCTCCAAAAACGC+AGG | + | chr5_2:22704609-22704628 | Msa0763480:intron | 50.0% | |
| TGGATCACGACGTGAGACTT+GGG | - | chr5_2:22705455-22705474 | None:intergenic | 50.0% | |
| TTGGATCACGACGTGAGACT+TGG | - | chr5_2:22705456-22705475 | None:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | + | chr5_2:22705566-22705585 | Msa0763480:intron | 50.0% | |
| AAAGTTCGGGGTTCAAACCC+CGG | + | chr5_2:22705608-22705627 | Msa0763480:intron | 50.0% | |
| ! | GCTGGGTATGCCACTTATCA+CGG | - | chr5_2:22706372-22706391 | None:intergenic | 50.0% |
| CATGGCTGGAGAAACATTCG+AGG | + | chr5_2:22706872-22706891 | Msa0763480:CDS | 50.0% | |
| AAGTCTGGTCAGAGTTGCGA+TGG | - | chr5_2:22706901-22706920 | None:intergenic | 50.0% | |
| !! | ATTTGATAACGCGGAGGTGG+TGG | + | chr5_2:22707028-22707047 | Msa0763480:intron | 50.0% |
| TTCAGGGAGAAAGCTGAGCT+TGG | + | chr5_2:22707132-22707151 | Msa0763480:intron | 50.0% | |
| CGTCAGCTCCTTGATCTTCA+CGG | - | chr5_2:22707169-22707188 | None:intergenic | 50.0% | |
| CGTGAAGATCAAGGAGCTGA+CGG | + | chr5_2:22707167-22707186 | Msa0763480:CDS | 50.0% | |
| CGGTTCAAAGCCGTTTAACC+CGG | + | chr5_2:22707206-22707225 | Msa0763480:CDS | 50.0% | |
| CCCAACTATGCCGTAAGTTG+AGG | + | chr5_2:22707865-22707884 | Msa0763480:intron | 50.0% | |
| CCCTCAACTTACGGCATAGT+TGG | - | chr5_2:22707869-22707888 | None:intergenic | 50.0% | |
| ! | GTGCTGTACGTCCTCTTTTC+AGG | + | chr5_2:22707964-22707983 | Msa0763480:intron | 50.0% |
| CTGTACGGTGAACTTGCCAA+AGG | + | chr5_2:22707999-22708018 | Msa0763480:CDS | 50.0% | |
| AATAGCTGACCTTAGGGCTC+TGG | - | chr5_2:22708025-22708044 | None:intergenic | 50.0% | |
| AGACCAAGTATTCGGGAGCA+GGG | + | chr5_2:22709086-22709105 | Msa0763480:intron | 50.0% | |
| TGGTGAAGAAAGAGAGGTGG+TGG | - | chr5_2:22709165-22709184 | None:intergenic | 50.0% | |
| GTTATTGGACACAGCTGCTG+TGG | + | chr5_2:22710216-22710235 | Msa0763480:CDS | 50.0% | |
| ! | AGCTGCTGTGGAGGCATAAA+GGG | + | chr5_2:22710228-22710247 | Msa0763480:CDS | 50.0% |
| CGACAGCGTATCATCACTCA+CGG | + | chr5_2:22710695-22710714 | Msa0763480:intron | 50.0% | |
| GACAGCGTATCATCACTCAC+GGG | + | chr5_2:22710696-22710715 | Msa0763480:intron | 50.0% | |
| CGTATCATCACTCACGGGAA+AGG | + | chr5_2:22710701-22710720 | Msa0763480:intron | 50.0% | |
| AAAAACTACTCCCTCCGTCC+CGG | + | chr5_2:22711122-22711141 | Msa0763480:intron | 50.0% | |
| GTAGGTCAGTTAAACCGGGA+CGG | - | chr5_2:22711139-22711158 | None:intergenic | 50.0% | |
| TTGCAATCCAGCAAGGTCCA+AGG | + | chr5_2:22711420-22711439 | Msa0763480:intron | 50.0% | |
| CTCTAACGTACGCGGTGCAT+AGG | + | chr5_2:22704272-22704291 | Msa0763480:intron | 55.0% | |
| AAGTGGAATCTGGTGGGGGT+GGG | - | chr5_2:22704543-22704562 | None:intergenic | 55.0% | |
| AAAGTGGAATCTGGTGGGGG+TGG | - | chr5_2:22704544-22704563 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr5_2:22705565-22705584 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr5_2:22705562-22705581 | Msa0763480:intron | 55.0% | |
| CAGCTCCTTGATCTTCACGG+CGG | - | chr5_2:22707166-22707185 | None:intergenic | 55.0% | |
| GAAGATCAAGGAGCTGACGG+CGG | + | chr5_2:22707170-22707189 | Msa0763480:CDS | 55.0% | |
| AGCCGTTTAACCCGGATGAG+AGG | + | chr5_2:22707214-22707233 | Msa0763480:CDS | 55.0% | |
| GCAAGTTCACCGTACAGCTC+AGG | - | chr5_2:22707996-22708015 | None:intergenic | 55.0% | |
| GGCGATGTTACGGACCACAA+AGG | - | chr5_2:22708430-22708449 | None:intergenic | 55.0% | |
| GGTCCGTAACATCGCCAACA+TGG | + | chr5_2:22708434-22708453 | Msa0763480:CDS | 55.0% | |
| CAGACCAAGTATTCGGGAGC+AGG | + | chr5_2:22709085-22709104 | Msa0763480:intron | 55.0% | |
| GACCAAGTATTCGGGAGCAG+GGG | + | chr5_2:22709087-22709106 | Msa0763480:intron | 55.0% | |
| AGGGGCGGCCATTGAATATG+CGG | + | chr5_2:22709105-22709124 | Msa0763480:CDS | 55.0% | |
| ! | TGGTGGGTCTCTTGGAACAG+TGG | + | chr5_2:22709218-22709237 | Msa0763480:intron | 55.0% |
| ATTGGACACAGCTGCTGTGG+AGG | + | chr5_2:22710219-22710238 | Msa0763480:CDS | 55.0% | |
| ! | CAGCTGCTGTGGAGGCATAA+AGG | + | chr5_2:22710227-22710246 | Msa0763480:CDS | 55.0% |
| ! | GCTGCTGTGGAGGCATAAAG+GGG | + | chr5_2:22710229-22710248 | Msa0763480:CDS | 55.0% |
| TTGCGGTGGTCCCATCATCT+GGG | - | chr5_2:22710266-22710285 | None:intergenic | 55.0% | |
| CATCACTCACGGGAAAGGAG+AGG | + | chr5_2:22710706-22710725 | Msa0763480:intron | 55.0% | |
| GTCAGTTAAACCGGGACGGA+GGG | - | chr5_2:22711135-22711154 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr5_2:22711335-22711354 | Msa0763480:intron | 55.0% | |
| AATCTGGTGGGGGTGGGACT+TGG | - | chr5_2:22704537-22704556 | None:intergenic | 60.0% | |
| GAGAGAGACCACAACGCGCT+GGG | - | chr5_2:22706389-22706408 | None:intergenic | 60.0% | |
| CATCGCCGCCGTGAAGATCA+AGG | + | chr5_2:22707158-22707177 | Msa0763480:CDS | 60.0% | |
| ACGGCGGAGTTAGAGGCCAA+CGG | + | chr5_2:22707186-22707205 | Msa0763480:CDS | 60.0% | |
| CGGATCGGATCCTCTCATCC+GGG | - | chr5_2:22707227-22707246 | None:intergenic | 60.0% | |
| CCGGATCGGATCCTCTCATC+CGG | - | chr5_2:22707228-22707247 | None:intergenic | 60.0% | |
| CCGGATGAGAGGATCCGATC+CGG | + | chr5_2:22707225-22707244 | Msa0763480:CDS | 60.0% | |
| TGCCAAAGGCCAGAGCCCTA+AGG | + | chr5_2:22708013-22708032 | Msa0763480:CDS | 60.0% | |
| ! | GACCTTAGGGCTCTGGCCTT+TGG | - | chr5_2:22708018-22708037 | None:intergenic | 60.0% |
| CCACAAAGGCTTCACCCGGT+TGG | - | chr5_2:22708416-22708435 | None:intergenic | 60.0% | |
| CCAACCGGGTGAAGCCTTTG+TGG | + | chr5_2:22708413-22708432 | Msa0763480:CDS | 60.0% | |
| CGGACCACAAAGGCTTCACC+CGG | - | chr5_2:22708420-22708439 | None:intergenic | 60.0% | |
| CAAGTATTCGGGAGCAGGGG+CGG | + | chr5_2:22709090-22709109 | Msa0763480:CDS | 60.0% | |
| CTTGCGGTGGTCCCATCATC+TGG | - | chr5_2:22710267-22710286 | None:intergenic | 60.0% | |
| !! | CAGATGATGGGACCACCGCA+AGG | + | chr5_2:22710265-22710284 | Msa0763480:CDS | 60.0% |
| TGATGGGACCACCGCAAGGT+AGG | + | chr5_2:22710269-22710288 | Msa0763480:intron | 60.0% | |
| GGTCAGTTAAACCGGGACGG+AGG | - | chr5_2:22711136-22711155 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr5_2:22711334-22711353 | Msa0763480:intron | 60.0% | |
| GTGGCATACCCAGCGCGTTG+TGG | + | chr5_2:22706378-22706397 | Msa0763480:intron | 65.0% | |
| GGAGAGAGACCACAACGCGC+TGG | - | chr5_2:22706390-22706409 | None:intergenic | 65.0% | |
| GGAGCTGACGGCGGAGTTAG+AGG | + | chr5_2:22707179-22707198 | Msa0763480:CDS | 65.0% | |
| CGCCCCTGCTCCCGAATACT+TGG | - | chr5_2:22709092-22709111 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 22702413 | 22712328 | 22702413 | ID=Msa0763480;Name=Msa0763480 |
| chr5_2 | mRNA | 22702413 | 22712328 | 22702413 | ID=Msa0763480-mRNA-1;Parent=Msa0763480;Name=Msa0763480-mRNA-1;_AED=0.28;_eAED=0.28;_QI=340|0.88|0.9|1|0.77|0.7|10|508|264 |
| chr5_2 | exon | 22702413 | 22702729 | 22702413 | ID=Msa0763480-mRNA-1:exon:9332;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22703455 | 22703534 | 22703455 | ID=Msa0763480-mRNA-1:exon:9333;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22706864 | 22706925 | 22706864 | ID=Msa0763480-mRNA-1:exon:9334;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22707137 | 22707277 | 22707137 | ID=Msa0763480-mRNA-1:exon:9335;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22707986 | 22708034 | 22707986 | ID=Msa0763480-mRNA-1:exon:9336;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22708357 | 22708473 | 22708357 | ID=Msa0763480-mRNA-1:exon:9337;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22709088 | 22709141 | 22709088 | ID=Msa0763480-mRNA-1:exon:9338;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22710201 | 22710286 | 22710201 | ID=Msa0763480-mRNA-1:exon:9339;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22711435 | 22711498 | 22711435 | ID=Msa0763480-mRNA-1:exon:9340;Parent=Msa0763480-mRNA-1 |
| chr5_2 | exon | 22711656 | 22712328 | 22711656 | ID=Msa0763480-mRNA-1:exon:9341;Parent=Msa0763480-mRNA-1 |
| chr5_2 | five_prime_UTR | 22702413 | 22702729 | 22702413 | ID=Msa0763480-mRNA-1:five_prime_utr;Parent=Msa0763480-mRNA-1 |
| chr5_2 | five_prime_UTR | 22703455 | 22703477 | 22703455 | ID=Msa0763480-mRNA-1:five_prime_utr;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22703478 | 22703534 | 22703478 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22706864 | 22706925 | 22706864 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22707137 | 22707277 | 22707137 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22707986 | 22708034 | 22707986 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22708357 | 22708473 | 22708357 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22709088 | 22709141 | 22709088 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22710201 | 22710286 | 22710201 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22711435 | 22711498 | 22711435 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | CDS | 22711656 | 22711820 | 22711656 | ID=Msa0763480-mRNA-1:cds;Parent=Msa0763480-mRNA-1 |
| chr5_2 | three_prime_UTR | 22711821 | 22712328 | 22711821 | ID=Msa0763480-mRNA-1:three_prime_utr;Parent=Msa0763480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
