Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805610 | XP_003613228.1 | 89.474 | 285 | 5 | 2 | 1 | 267 | 1 | 278 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805610 | sp|P27141|CAHC_TOBAC | 64.045 | 267 | 70 | 3 | 20 | 267 | 62 | 321 | 7.52e-120 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805610 | G7K1D4 | 89.474 | 285 | 5 | 2 | 1 | 267 | 1 | 278 | 0.0 | 513 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0763480 | Msa0805610 | 0.903575 | 3.011476e-79 | -8.615850e-47 |
| Msa0805610 | Msa0842980 | 0.882304 | 1.165762e-70 | -8.615850e-47 |
| Msa0805610 | Msa1204260 | 0.851617 | 7.897344e-61 | -8.615850e-47 |
| Msa0805610 | Msa1333120 | 0.825215 | 5.292754e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805610 | MtrunA17_Chr5g0413551 | 88.593 | 263 | 5 | 2 | 23 | 267 | 1 | 256 | 3.01e-169 | 468 |
| Msa0805610 | MtrunA17_Chr8g0365441 | 73.282 | 262 | 44 | 3 | 23 | 266 | 1 | 254 | 1.06e-137 | 388 |
| Msa0805610 | MtrunA17_Chr6g0450641 | 56.777 | 273 | 87 | 4 | 18 | 267 | 67 | 331 | 4.92e-104 | 305 |
| Msa0805610 | MtrunA17_Chr3g0117661 | 49.621 | 264 | 107 | 3 | 23 | 267 | 1 | 257 | 2.31e-79 | 240 |
| Msa0805610 | MtrunA17_Chr3g0117691 | 47.727 | 264 | 112 | 3 | 23 | 267 | 1 | 257 | 1.64e-77 | 235 |
| Msa0805610 | MtrunA17_Chr2g0279581 | 46.798 | 203 | 82 | 2 | 74 | 259 | 89 | 282 | 1.22e-63 | 201 |
| Msa0805610 | MtrunA17_Chr5g0427341 | 46.305 | 203 | 84 | 4 | 74 | 259 | 94 | 288 | 2.00e-55 | 181 |
| Msa0805610 | MtrunA17_Chr3g0117671 | 74.359 | 39 | 10 | 0 | 105 | 143 | 1 | 39 | 3.83e-14 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0805610 | AT5G14740.9 | 62.406 | 266 | 72 | 3 | 23 | 267 | 1 | 259 | 4.09e-116 | 333 |
| Msa0805610 | AT5G14740.8 | 62.406 | 266 | 72 | 3 | 23 | 267 | 1 | 259 | 4.09e-116 | 333 |
| Msa0805610 | AT5G14740.7 | 62.406 | 266 | 72 | 3 | 23 | 267 | 1 | 259 | 4.09e-116 | 333 |
| Msa0805610 | AT5G14740.2 | 62.406 | 266 | 72 | 3 | 23 | 267 | 1 | 259 | 4.09e-116 | 333 |
| Msa0805610 | AT5G14740.6 | 62.406 | 266 | 72 | 3 | 23 | 267 | 1 | 259 | 4.09e-116 | 333 |
| Msa0805610 | AT1G70410.2 | 58.246 | 285 | 95 | 2 | 1 | 267 | 1 | 279 | 1.52e-115 | 333 |
| Msa0805610 | AT5G14740.1 | 59.929 | 282 | 84 | 4 | 8 | 267 | 57 | 331 | 7.33e-115 | 333 |
| Msa0805610 | AT5G14740.4 | 59.574 | 282 | 84 | 5 | 8 | 267 | 57 | 330 | 2.58e-112 | 327 |
| Msa0805610 | AT5G14740.3 | 58.865 | 282 | 86 | 5 | 8 | 267 | 57 | 330 | 3.70e-111 | 324 |
| Msa0805610 | AT1G23730.2 | 57.414 | 263 | 88 | 2 | 23 | 267 | 1 | 257 | 1.59e-108 | 314 |
| Msa0805610 | AT1G23730.1 | 57.414 | 263 | 88 | 2 | 23 | 267 | 1 | 257 | 1.59e-108 | 314 |
| Msa0805610 | AT1G70410.3 | 59.542 | 262 | 82 | 2 | 23 | 266 | 1 | 256 | 2.62e-108 | 314 |
| Msa0805610 | AT1G70410.1 | 59.542 | 262 | 82 | 2 | 23 | 266 | 1 | 256 | 2.62e-108 | 314 |
| Msa0805610 | AT3G01500.4 | 58.647 | 266 | 82 | 3 | 23 | 267 | 1 | 259 | 2.47e-107 | 311 |
| Msa0805610 | AT3G01500.1 | 58.647 | 266 | 82 | 3 | 23 | 267 | 1 | 259 | 2.98e-107 | 311 |
| Msa0805610 | AT3G01500.3 | 58.582 | 268 | 83 | 3 | 21 | 267 | 76 | 336 | 8.58e-107 | 313 |
| Msa0805610 | AT3G01500.2 | 58.582 | 268 | 83 | 3 | 21 | 267 | 76 | 336 | 9.88e-107 | 313 |
| Msa0805610 | AT5G14740.5 | 59.434 | 212 | 58 | 3 | 23 | 213 | 73 | 277 | 3.28e-82 | 249 |
| Msa0805610 | AT4G33580.3 | 41.736 | 242 | 109 | 5 | 40 | 259 | 48 | 279 | 2.58e-57 | 185 |
| Msa0805610 | AT4G33580.1 | 41.736 | 242 | 109 | 5 | 40 | 259 | 48 | 279 | 2.58e-57 | 185 |
| Msa0805610 | AT4G33580.2 | 41.564 | 243 | 109 | 6 | 40 | 259 | 48 | 280 | 1.16e-56 | 184 |
| Msa0805610 | AT1G58180.2 | 35.686 | 255 | 138 | 3 | 21 | 258 | 28 | 273 | 6.64e-52 | 171 |
| Msa0805610 | AT1G58180.4 | 35.686 | 255 | 138 | 3 | 21 | 258 | 28 | 273 | 6.64e-52 | 171 |
| Msa0805610 | AT1G58180.7 | 37.719 | 228 | 118 | 2 | 48 | 258 | 2 | 222 | 6.37e-51 | 167 |
| Msa0805610 | AT1G58180.3 | 37.719 | 228 | 118 | 2 | 48 | 258 | 2 | 222 | 6.37e-51 | 167 |
| Msa0805610 | AT1G58180.6 | 37.719 | 228 | 118 | 2 | 48 | 258 | 2 | 222 | 6.37e-51 | 167 |
| Msa0805610 | AT1G58180.1 | 36.638 | 232 | 121 | 3 | 21 | 235 | 28 | 250 | 5.17e-47 | 157 |
| Msa0805610 | AT1G58180.5 | 36.190 | 210 | 108 | 3 | 21 | 213 | 28 | 228 | 4.19e-39 | 138 |
Find 117 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCCTCTGTATCCATTTA+AGG | 0.143367 | 5_3:+22301053 | Msa0805610:CDS |
| ACCTTGCTGGATTGCAAATT+TGG | 0.156469 | 5_3:-22300665 | None:intergenic |
| GTTGAGAATATTGTAGTTAT+TGG | 0.204310 | 5_3:+22299702 | Msa0805610:CDS |
| TTAAACCAGTGACTCGAATT+TGG | 0.220416 | 5_3:+22301525 | Msa0805610:three_prime_UTR |
| GCCCCAGCCATTTATCTCTT+TGG | 0.249549 | 5_3:-22292582 | None:intergenic |
| CTTGCGGTGGTCCCATCATC+TGG | 0.259227 | 5_3:-22299765 | None:intergenic |
| CACTTGACACTCCAACTTAA+AGG | 0.269238 | 5_3:-22301343 | None:intergenic |
| GACCTTAGGGCTCTGGCCTT+TGG | 0.303340 | 5_3:-22297300 | None:intergenic |
| TTTGCCCCTCTGCATGAAAA+TGG | 0.312676 | 5_3:-22291783 | None:intergenic |
| AATTTAACCTTGGACCTTGC+TGG | 0.313505 | 5_3:-22300678 | None:intergenic |
| CAGCTGCTGTGGAGGCATAA+AGG | 0.320529 | 5_3:+22299728 | Msa0805610:CDS |
| AAACCATTTGTTCGAGTTGC+CGG | 0.321392 | 5_3:+22301473 | Msa0805610:three_prime_UTR |
| AGTGTGCCCTTCTCACATTT+TGG | 0.325244 | 5_3:+22297674 | Msa0805610:CDS |
| AGCTGCTGTGGAGGCATAAA+GGG | 0.327110 | 5_3:+22299729 | Msa0805610:CDS |
| AAATGGATACAGAGGGTAAA+AGG | 0.342781 | 5_3:-22301049 | None:intergenic |
| TAAAATATGATTGGAGAGAT+TGG | 0.355748 | 5_3:-22291817 | None:intergenic |
| GGTGTTGGAGAGACCTTAAA+TGG | 0.356865 | 5_3:-22301066 | None:intergenic |
| TTTCATTCCCTTGTATGTTT+AGG | 0.369114 | 5_3:+22291734 | Msa0805610:five_prime_UTR |
| TATCATCAACATTAGTCCTT+TGG | 0.369322 | 5_3:+22301108 | Msa0805610:three_prime_UTR |
| GGAGCTGACGGCGGAGTTAG+AGG | 0.369439 | 5_3:+22296447 | Msa0805610:CDS |
| TTCTCTAGACAATAATTAAG+AGG | 0.374875 | 5_3:+22301636 | Msa0805610:three_prime_UTR |
| CAGTGATTTCATTGAGCAAT+GGG | 0.388371 | 5_3:+22300641 | Msa0805610:intron |
| CCAACCGGGTGAAGCCTTTG+TGG | 0.395118 | 5_3:+22297701 | Msa0805610:CDS |
| CAATGTAACTAAAATATGAT+TGG | 0.422209 | 5_3:-22291826 | None:intergenic |
| AAGAGGACCAAAGAGATAAA+TGG | 0.427405 | 5_3:+22292575 | Msa0805610:exon |
| GATAATGTTTATGCTACATT+GGG | 0.438170 | 5_3:+22291520 | None:intergenic |
| ATCCTCTCATCCGGGTTAAA+CGG | 0.445021 | 5_3:-22296484 | None:intergenic |
| TCTATCCAAATTCGAGTCAC+TGG | 0.445195 | 5_3:-22301530 | None:intergenic |
| GGGAATGAAAATGAATTTGA+AGG | 0.445553 | 5_3:-22291721 | None:intergenic |
| GAAAAGTAAACCTTGTCATA+TGG | 0.446345 | 5_3:-22297750 | None:intergenic |
| CGAGTTGCCGGAGAATTTCA+AGG | 0.451054 | 5_3:+22301485 | Msa0805610:three_prime_UTR |
| CTGCAAGTTCACTTTGGTGT+TGG | 0.455447 | 5_3:-22301081 | None:intergenic |
| GAACCATGTTGGCGATGTTA+CGG | 0.461219 | 5_3:-22297725 | None:intergenic |
| ATCTTCTTCACCTTTACTTG+TGG | 0.465958 | 5_3:+22291554 | Msa0805610:five_prime_UTR |
| GTTAAACGGCTTTGAACCGT+TGG | 0.469755 | 5_3:-22296470 | None:intergenic |
| CCGGATCGGATCCTCTCATC+CGG | 0.470107 | 5_3:-22296493 | None:intergenic |
| CTCATGTCTATCCCAGATGA+TGG | 0.470494 | 5_3:+22299753 | Msa0805610:CDS |
| GAAGCTGTGAATGTATCTCT+TGG | 0.472140 | 5_3:+22300909 | Msa0805610:CDS |
| GGATAATGTTTATGCTACAT+TGG | 0.472933 | 5_3:+22291519 | None:intergenic |
| TGTTGTTAAGCCACAAGTAA+AGG | 0.474304 | 5_3:-22291564 | None:intergenic |
| TATGCAAAGCACACATGAAA+AGG | 0.474665 | 5_3:-22291691 | None:intergenic |
| GCAAGTTCACCGTACAGCTC+AGG | 0.475420 | 5_3:-22297278 | None:intergenic |
| AACTAGCCCTTGAAATTCTC+CGG | 0.475518 | 5_3:-22301492 | None:intergenic |
| TGTGAGTTAATAGAAGCATT+GGG | 0.477635 | 5_3:-22291653 | None:intergenic |
| AGTCTTGAAACTAACAAAAC+CGG | 0.477828 | 5_3:-22296512 | None:intergenic |
| ACAACACCATCTCTCACAAA+TGG | 0.478188 | 5_3:-22300948 | None:intergenic |
| TCTCCGGCAACTCGAACAAA+TGG | 0.478574 | 5_3:-22301476 | None:intergenic |
| ATGTGAGTTAATAGAAGCAT+TGG | 0.491651 | 5_3:-22291654 | None:intergenic |
| CGGTTCAAAGCCGTTTAACC+CGG | 0.492215 | 5_3:+22296474 | Msa0805610:CDS |
| AATGTATGTTTCTTTCTCGA+TGG | 0.492489 | 5_3:-22301162 | None:intergenic |
| CTCGAATTTGGATAGAAAGC+AGG | 0.501144 | 5_3:+22301537 | Msa0805610:three_prime_UTR |
| TTCAGGGAGAAAGCTGAGCT+TGG | 0.509469 | 5_3:+22296400 | Msa0805610:intron |
| AATAGCTGACCTTAGGGCTC+TGG | 0.511436 | 5_3:-22297307 | None:intergenic |
| ACTTGTTTCTAATTTAACCT+TGG | 0.514008 | 5_3:-22300688 | None:intergenic |
| AAGAAAACCCTTGCTTTGAA+AGG | 0.517445 | 5_3:+22300972 | Msa0805610:CDS |
| AAGCTGTGAATGTATCTCTT+GGG | 0.518223 | 5_3:+22300910 | Msa0805610:CDS |
| TATATACTGCAAGTTCACTT+TGG | 0.518243 | 5_3:-22301087 | None:intergenic |
| GACCAAAGAGATAAATGGCT+GGG | 0.523819 | 5_3:+22292580 | Msa0805610:exon |
| AATATAGTTAACATCAGAGT+AGG | 0.526529 | 5_3:-22301568 | None:intergenic |
| CGTCAGCTCCTTGATCTTCA+CGG | 0.527964 | 5_3:-22296434 | None:intergenic |
| ACAGTGATTTCATTGAGCAA+TGG | 0.531537 | 5_3:+22300640 | Msa0805610:intron |
| ATGTGCTCCTTTCAAAGCAA+GGG | 0.535168 | 5_3:-22300979 | None:intergenic |
| CATCGCCGCCGTGAAGATCA+AGG | 0.541374 | 5_3:+22296426 | Msa0805610:CDS |
| AATGTTTATGCTACATTGGG+AGG | 0.541756 | 5_3:+22291523 | None:intergenic |
| TTGCGGTGGTCCCATCATCT+GGG | 0.549867 | 5_3:-22299764 | None:intergenic |
| GCAGTGCACAAACTGTGAAA+AGG | 0.551365 | 5_3:+22300728 | Msa0805610:CDS |
| TAGCACATAGACCTTTAAGT+TGG | 0.553212 | 5_3:+22301332 | Msa0805610:three_prime_UTR |
| GGAATGAAAATGAATTTGAA+GGG | 0.555451 | 5_3:-22291720 | None:intergenic |
| ACTTATCCATTTGTGAGAGA+TGG | 0.556933 | 5_3:+22300942 | Msa0805610:CDS |
| AATGTGCTCCTTTCAAAGCA+AGG | 0.563009 | 5_3:-22300980 | None:intergenic |
| AGTTAACATCAGAGTAGGAA+AGG | 0.563587 | 5_3:-22301563 | None:intergenic |
| AATCAGAAGGAAGACATGGC+TGG | 0.564330 | 5_3:+22296130 | Msa0805610:intron |
| CCGGATGAGAGGATCCGATC+CGG | 0.568309 | 5_3:+22296493 | Msa0805610:CDS |
| AAGTCTGGTCAGAGTTGCGA+TGG | 0.569242 | 5_3:-22296170 | None:intergenic |
| TGGAAATCCAAAATGTGAGA+AGG | 0.571528 | 5_3:-22297681 | None:intergenic |
| GGACCAAAGAGATAAATGGC+TGG | 0.573609 | 5_3:+22292579 | Msa0805610:exon |
| TCCAAATTTGCAATCCAGCA+AGG | 0.577092 | 5_3:+22300664 | Msa0805610:CDS |
| CCACAAAGGCTTCACCCGGT+TGG | 0.578743 | 5_3:-22297701 | None:intergenic |
| GGAAATCCAAAATGTGAGAA+GGG | 0.582778 | 5_3:-22297680 | None:intergenic |
| GTGAGTAAATATTCTCACAT+TGG | 0.583022 | 5_3:+22301365 | Msa0805610:three_prime_UTR |
| AAATGCAAAGCAGGGTGAAG+AGG | 0.585160 | 5_3:+22292558 | Msa0805610:intron |
| AAATAAAACTTGCCTTGCGG+TGG | 0.586782 | 5_3:-22299778 | None:intergenic |
| TGTGTGTGCCTAAACATACA+AGG | 0.588685 | 5_3:-22291742 | None:intergenic |
| ATTGGACACAGCTGCTGTGG+AGG | 0.590942 | 5_3:+22299720 | Msa0805610:CDS |
| CGGACCACAAAGGCTTCACC+CGG | 0.592537 | 5_3:-22297705 | None:intergenic |
| TGCCAAAGGCCAGAGCCCTA+AGG | 0.593445 | 5_3:+22297298 | Msa0805610:CDS |
| TCATGTCTATCCCAGATGAT+GGG | 0.593762 | 5_3:+22299754 | Msa0805610:CDS |
| TTGCAATCCAGCAAGGTCCA+AGG | 0.594272 | 5_3:+22300671 | Msa0805610:CDS |
| GAGTTGCCGGAGAATTTCAA+GGG | 0.595562 | 5_3:+22301486 | Msa0805610:three_prime_UTR |
| AGGAAGAATCCTGAGCTGTA+CGG | 0.595793 | 5_3:+22297269 | Msa0805610:intron |
| AAGTAAACCTTGTCATATGG+TGG | 0.601200 | 5_3:-22297747 | None:intergenic |
| GTTATTGGACACAGCTGCTG+TGG | 0.606630 | 5_3:+22299717 | Msa0805610:CDS |
| AAATAGATGCAAAGACACAA+TGG | 0.607582 | 5_3:-22301605 | None:intergenic |
| AGCCGTTTAACCCGGATGAG+AGG | 0.610912 | 5_3:+22296482 | Msa0805610:CDS |
| CATGGTTCCACCATATGACA+AGG | 0.613750 | 5_3:+22297740 | Msa0805610:CDS |
| CATGGCTGGAGAAACATTCG+AGG | 0.615024 | 5_3:+22296144 | Msa0805610:CDS |
| CGGATCGGATCCTCTCATCC+GGG | 0.617375 | 5_3:-22296492 | None:intergenic |
| GTCATATGGTGGAACCATGT+TGG | 0.618619 | 5_3:-22297736 | None:intergenic |
| TTGCACAAGCAAGATTGTCT+CGG | 0.626170 | 5_3:+22292629 | Msa0805610:CDS |
| GGTCCGTAACATCGCCAACA+TGG | 0.627271 | 5_3:+22297722 | Msa0805610:CDS |
| CAGATGATGGGACCACCGCA+AGG | 0.627584 | 5_3:+22299766 | Msa0805610:CDS |
| ACCAAAGAGATAAATGGCTG+GGG | 0.628077 | 5_3:+22292581 | Msa0805610:exon |
| TGAAACTAACAAAACCGGAT+CGG | 0.630831 | 5_3:-22296507 | None:intergenic |
| ATGAAATCAGAAGGAAGACA+TGG | 0.641190 | 5_3:+22296126 | Msa0805610:intron |
| CTGTACGGTGAACTTGCCAA+AGG | 0.647222 | 5_3:+22297284 | Msa0805610:CDS |
| GAATGAAAATGAATTTGAAG+GGG | 0.653077 | 5_3:-22291719 | None:intergenic |
| GAGACCTTAAATGGATACAG+AGG | 0.653917 | 5_3:-22301057 | None:intergenic |
| AATAAATAAAACTTGCCTTG+CGG | 0.654482 | 5_3:-22299781 | None:intergenic |
| CGTGAAGATCAAGGAGCTGA+CGG | 0.657927 | 5_3:+22296435 | Msa0805610:CDS |
| ACGGCGGAGTTAGAGGCCAA+CGG | 0.658529 | 5_3:+22296454 | Msa0805610:CDS |
| GCTGCTGTGGAGGCATAAAG+GGG | 0.658582 | 5_3:+22299730 | Msa0805610:CDS |
| AATGAAAATGAATTTGAAGG+GGG | 0.658628 | 5_3:-22291718 | None:intergenic |
| GGCGATGTTACGGACCACAA+AGG | 0.665172 | 5_3:-22297715 | None:intergenic |
| AGACCTTAAATGGATACAGA+GGG | 0.665728 | 5_3:-22301056 | None:intergenic |
| GTGTGTGCCTAAACATACAA+GGG | 0.684916 | 5_3:-22291741 | None:intergenic |
| GAAGATCAAGGAGCTGACGG+CGG | 0.707015 | 5_3:+22296438 | Msa0805610:CDS |
| CAGCTCCTTGATCTTCACGG+CGG | 0.827966 | 5_3:-22296431 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATATATATATATATA+CGG | - | chr5_3:22294125-22294144 | None:intergenic | 0.0% |
| !!! | ATAATTAGTTTATTAACAAA+TGG | - | chr5_3:22292115-22292134 | None:intergenic | 10.0% |
| !!! | CAAAATACTTATTTTATTAA+TGG | + | chr5_3:22292252-22292271 | Msa0805610:intron | 10.0% |
| !! | AAAAAAAAAAATTAATAGAG+TGG | - | chr5_3:22293146-22293165 | None:intergenic | 10.0% |
| !! | GTGTATATTAATTTAATTAA+TGG | + | chr5_3:22293669-22293688 | Msa0805610:intron | 10.0% |
| !!! | TTAATCTTTTTATATATTTG+GGG | - | chr5_3:22294753-22294772 | None:intergenic | 10.0% |
| !! | TATGTTTATCATTTAAAAAA+AGG | + | chr5_3:22295321-22295340 | Msa0805610:intron | 10.0% |
| !!! | TTATTACTATATTATTTTCA+GGG | + | chr5_3:22296384-22296403 | Msa0805610:intron | 10.0% |
| !!! | GATATATTTTGTTAAAAAAT+TGG | - | chr5_3:22296909-22296928 | None:intergenic | 10.0% |
| !! | ATATTTCTTATAAATAAGAT+CGG | + | chr5_3:22296946-22296965 | Msa0805610:intron | 10.0% |
| !!! | TAAATATATTACACTTTTAT+AGG | - | chr5_3:22297831-22297850 | None:intergenic | 10.0% |
| !!! | TAAAATATATATCTTCATTT+TGG | + | chr5_3:22298243-22298262 | Msa0805610:intron | 10.0% |
| !! | TATTATTATTATTATATGGT+GGG | + | chr5_3:22298711-22298730 | Msa0805610:intron | 10.0% |
| !! | TCACAATTAAATTATATTAA+TGG | - | chr5_3:22300015-22300034 | None:intergenic | 10.0% |
| !!! | ATATGATTCTTTTTTTATTA+AGG | + | chr5_3:22300246-22300265 | Msa0805610:intron | 10.0% |
| !! | TAAAAAAATCTTAAATTTGT+TGG | + | chr5_3:22300826-22300845 | Msa0805610:intron | 10.0% |
| !! | AATTATTTACATCAAAATGT+TGG | - | chr5_3:22292328-22292347 | None:intergenic | 15.0% |
| !! | TAAATAGAACCAAATAATTT+AGG | - | chr5_3:22292504-22292523 | None:intergenic | 15.0% |
| !!! | TATCAAGATAATTTTGATAA+TGG | - | chr5_3:22292767-22292786 | None:intergenic | 15.0% |
| !!! | AGAAGAATGATTATTTATTT+TGG | - | chr5_3:22293492-22293511 | None:intergenic | 15.0% |
| !!! | CTTTTTGTTTTCATAATTTT+GGG | + | chr5_3:22293549-22293568 | Msa0805610:intron | 15.0% |
| !!! | TATTTTTGACACAATAATAT+AGG | - | chr5_3:22293728-22293747 | None:intergenic | 15.0% |
| !!! | ATACGTTTTTTTTTAAAAGA+TGG | + | chr5_3:22293996-22294015 | Msa0805610:intron | 15.0% |
| !! | ATTAAATAATTAACGTAAAG+TGG | + | chr5_3:22294768-22294787 | Msa0805610:intron | 15.0% |
| !!! | AAATACTTTTTTTTTGGTAT+TGG | - | chr5_3:22294902-22294921 | None:intergenic | 15.0% |
| !! | CATTTAAAAGAAATTGAAAT+TGG | - | chr5_3:22294967-22294986 | None:intergenic | 15.0% |
| !!! | ATATCTTGTTTACAAAATAA+AGG | - | chr5_3:22295206-22295225 | None:intergenic | 15.0% |
| !! | TGCTTTATCATAATAATAAT+GGG | - | chr5_3:22295289-22295308 | None:intergenic | 15.0% |
| !! | TTGCTTTATCATAATAATAA+TGG | - | chr5_3:22295290-22295309 | None:intergenic | 15.0% |
| !! | TTTAAAAACAAAAAACTTAG+TGG | - | chr5_3:22295362-22295381 | None:intergenic | 15.0% |
| !! | ATAATATAGTAATAACGAAA+CGG | - | chr5_3:22296379-22296398 | None:intergenic | 15.0% |
| !!! | GTTATTACTATATTATTTTC+AGG | + | chr5_3:22296383-22296402 | Msa0805610:intron | 15.0% |
| !! | ATAGGTATATTATATATCAA+AGG | - | chr5_3:22297490-22297509 | None:intergenic | 15.0% |
| !!! | TAGTAGATATTTTTCATTAT+AGG | - | chr5_3:22297508-22297527 | None:intergenic | 15.0% |
| !!! | AAACTTAAAACTGTTTTATT+AGG | - | chr5_3:22298135-22298154 | None:intergenic | 15.0% |
| !! | AAATGAAATGAAATAATCAT+TGG | + | chr5_3:22298489-22298508 | Msa0805610:intron | 15.0% |
| !!! | GGAGTATTATTATTATTATA+TGG | + | chr5_3:22298707-22298726 | Msa0805610:intron | 15.0% |
| !! | GTATTATTATTATTATATGG+TGG | + | chr5_3:22298710-22298729 | Msa0805610:intron | 15.0% |
| !!! | AGTAAAATAACATAACATTT+TGG | + | chr5_3:22298930-22298949 | Msa0805610:intron | 15.0% |
| !! | TAATTTAACCCTTAAAAAAA+TGG | - | chr5_3:22299320-22299339 | None:intergenic | 15.0% |
| !! | CAACTACTTATTTATATAAA+AGG | - | chr5_3:22299476-22299495 | None:intergenic | 15.0% |
| !! | CAATTAAATTATATTAATGG+TGG | - | chr5_3:22300012-22300031 | None:intergenic | 15.0% |
| !! | TAAAATGAATAAGTTAAGTA+GGG | - | chr5_3:22300779-22300798 | None:intergenic | 15.0% |
| !! | ATAAAATGAATAAGTTAAGT+AGG | - | chr5_3:22300780-22300799 | None:intergenic | 15.0% |
| !! | CAATGTAACTAAAATATGAT+TGG | - | chr5_3:22291829-22291848 | None:intergenic | 20.0% |
| !!! | CAATCATATTTTAGTTACAT+TGG | + | chr5_3:22291827-22291846 | Msa0805610:five_prime_UTR | 20.0% |
| !!! | TTACAATTTTTACTTGTTTC+TGG | + | chr5_3:22291900-22291919 | Msa0805610:intron | 20.0% |
| !! | GTTTATTAACAAATGGTTTA+AGG | - | chr5_3:22292108-22292127 | None:intergenic | 20.0% |
| !! | TTTATTAATGGAAATGAGAA+AGG | + | chr5_3:22292264-22292283 | Msa0805610:intron | 20.0% |
| !!! | ATGAAAAAAGTATTCATATG+GGG | - | chr5_3:22292373-22292392 | None:intergenic | 20.0% |
| !!! | GATGAAAAAAGTATTCATAT+GGG | - | chr5_3:22292374-22292393 | None:intergenic | 20.0% |
| !!! | AAATTGCTATGTATTTTGTT+GGG | - | chr5_3:22292475-22292494 | None:intergenic | 20.0% |
| !! | TTTCCATAACCTAAATTATT+TGG | + | chr5_3:22292492-22292511 | Msa0805610:intron | 20.0% |
| !!! | CATTTGTCGATTAAAAATTT+AGG | - | chr5_3:22292834-22292853 | None:intergenic | 20.0% |
| !! | TACATTATTTCCTATGTAAT+GGG | - | chr5_3:22293117-22293136 | None:intergenic | 20.0% |
| !! | AAAAAAATTAATAGAGTGGA+GGG | - | chr5_3:22293142-22293161 | None:intergenic | 20.0% |
| !! | AAAAAAAATTAATAGAGTGG+AGG | - | chr5_3:22293143-22293162 | None:intergenic | 20.0% |
| !! | AAATTATGAAAACAAAAAGG+CGG | - | chr5_3:22293548-22293567 | None:intergenic | 20.0% |
| !! | CCAAAATTATGAAAACAAAA+AGG | - | chr5_3:22293551-22293570 | None:intergenic | 20.0% |
| !!! | CCTTTTTGTTTTCATAATTT+TGG | + | chr5_3:22293548-22293567 | Msa0805610:intron | 20.0% |
| !! | CAAACAATTTGATTAATGTT+TGG | + | chr5_3:22293894-22293913 | Msa0805610:intron | 20.0% |
| !!! | TGTAGTGTTCATAATTATTT+TGG | + | chr5_3:22294032-22294051 | Msa0805610:intron | 20.0% |
| !!! | CTAAGATAGTCAAAATTTTA+TGG | - | chr5_3:22294240-22294259 | None:intergenic | 20.0% |
| !!! | TTTTTTGTAGTGATTTTAGT+AGG | + | chr5_3:22294296-22294315 | Msa0805610:intron | 20.0% |
| !!! | TAGTAGCTTTTTATCTAATA+AGG | - | chr5_3:22294343-22294362 | None:intergenic | 20.0% |
| !! | ATTGATTATTGAGTCAAAAA+GGG | - | chr5_3:22294457-22294476 | None:intergenic | 20.0% |
| !!! | TATTGATTATTGAGTCAAAA+AGG | - | chr5_3:22294458-22294477 | None:intergenic | 20.0% |
| !!! | TATTTTCCTTTGTAAATTAG+TGG | - | chr5_3:22294567-22294586 | None:intergenic | 20.0% |
| !!! | AATGACATGCTAATTTTTTT+AGG | + | chr5_3:22294983-22295002 | Msa0805610:intron | 20.0% |
| !! | ACTAACATAACAATTAACAT+AGG | - | chr5_3:22295072-22295091 | None:intergenic | 20.0% |
| !!! | TATTTTCAAAGTGAATAAGT+CGG | + | chr5_3:22295404-22295423 | Msa0805610:intron | 20.0% |
| !!! | AATATATATGAATTTTGACG+CGG | - | chr5_3:22295700-22295719 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTATGAAATCAGA+AGG | + | chr5_3:22296117-22296136 | Msa0805610:intron | 20.0% |
| !! | TCATAAGTAACTATTCTAAT+TGG | + | chr5_3:22296636-22296655 | Msa0805610:intron | 20.0% |
| !!! | CAACTGTTAATTTTAATTCA+AGG | - | chr5_3:22296670-22296689 | None:intergenic | 20.0% |
| !! | TTAATAAATGTTGATGTATC+TGG | + | chr5_3:22296882-22296901 | Msa0805610:intron | 20.0% |
| !!! | ACATAAAAATTTGCTTAACT+TGG | + | chr5_3:22297192-22297211 | Msa0805610:intron | 20.0% |
| !!! | TAGTTTTTCTTAATGCAATA+AGG | - | chr5_3:22297786-22297805 | None:intergenic | 20.0% |
| !! | TTGAATTTATTGAATTCACA+TGG | + | chr5_3:22297932-22297951 | Msa0805610:intron | 20.0% |
| !! | TATCAAAGATAAAATGATGT+TGG | - | chr5_3:22298102-22298121 | None:intergenic | 20.0% |
| !!! | GTCTTTTTCTTATAAAGTAA+GGG | - | chr5_3:22298537-22298556 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+AGG | - | chr5_3:22298538-22298557 | None:intergenic | 20.0% |
| !! | GAAAAAAGTTAAAGTTGTAT+TGG | + | chr5_3:22298616-22298635 | Msa0805610:intron | 20.0% |
| !!! | CATTTTGAAACAAAGTTTTT+TGG | + | chr5_3:22298656-22298675 | Msa0805610:intron | 20.0% |
| !! | CTTCAAAAAAAAATGTCAAA+TGG | - | chr5_3:22298770-22298789 | None:intergenic | 20.0% |
| !!! | TGACATTTTTTTTTGAAGAA+AGG | + | chr5_3:22298772-22298791 | Msa0805610:intron | 20.0% |
| !! | TATTCTATTGCATTATTTGT+TGG | + | chr5_3:22298816-22298835 | Msa0805610:intron | 20.0% |
| !! | ATTCTATTGCATTATTTGTT+GGG | + | chr5_3:22298817-22298836 | Msa0805610:intron | 20.0% |
| !! | TCATATCTTATCGTATATTA+CGG | + | chr5_3:22298860-22298879 | Msa0805610:intron | 20.0% |
| !!! | TCAATATGTGTATCTTTTAT+AGG | + | chr5_3:22299079-22299098 | Msa0805610:intron | 20.0% |
| !!! | GTATCTTTTATAGGTTTTTA+TGG | + | chr5_3:22299088-22299107 | Msa0805610:intron | 20.0% |
| !! | CTTTGTGAAATTATCTTTAT+TGG | + | chr5_3:22299113-22299132 | Msa0805610:intron | 20.0% |
| !! | TCAATTTCTTCAAATTCTTA+AGG | - | chr5_3:22299579-22299598 | None:intergenic | 20.0% |
| !!! | GCATTTTACTTTTTTGTTTT+TGG | + | chr5_3:22299656-22299675 | Msa0805610:intron | 20.0% |
| !! | TTATTTATTATTATGTTCCC+TGG | + | chr5_3:22299795-22299814 | Msa0805610:intron | 20.0% |
| !!! | TTTTTTCTCTAATTTGTTCT+TGG | - | chr5_3:22300122-22300141 | None:intergenic | 20.0% |
| !!! | TAGTTTTTGCATAATCATAT+TGG | + | chr5_3:22300486-22300505 | Msa0805610:intron | 20.0% |
| !!! | AATTTCATTTTAAGGATATG+TGG | + | chr5_3:22301292-22301311 | Msa0805610:three_prime_UTR | 20.0% |
| !!! | ATTTCATTTTAAGGATATGT+GGG | + | chr5_3:22301293-22301312 | Msa0805610:three_prime_UTR | 20.0% |
| ! | AATGAAAATGAATTTGAAGG+GGG | - | chr5_3:22291721-22291740 | None:intergenic | 25.0% |
| ! | GAATGAAAATGAATTTGAAG+GGG | - | chr5_3:22291722-22291741 | None:intergenic | 25.0% |
| ! | GGAATGAAAATGAATTTGAA+GGG | - | chr5_3:22291723-22291742 | None:intergenic | 25.0% |
| ! | TAAAATATGATTGGAGAGAT+TGG | - | chr5_3:22291820-22291839 | None:intergenic | 25.0% |
| ! | TGTATCAAACAGTAAATAGT+TGG | - | chr5_3:22291875-22291894 | None:intergenic | 25.0% |
| !! | TAACTAGAGAAAATGCATTT+TGG | + | chr5_3:22291984-22292003 | Msa0805610:intron | 25.0% |
| !! | AACTAGAGAAAATGCATTTT+GGG | + | chr5_3:22291985-22292004 | Msa0805610:intron | 25.0% |
| ! | TAAACATTAGAGAAGACATT+AGG | - | chr5_3:22292060-22292079 | None:intergenic | 25.0% |
| ! | TACATCAAAATGTTGGAAAA+TGG | - | chr5_3:22292321-22292340 | None:intergenic | 25.0% |
| !!! | TGAAAAAAGTATTCATATGG+GGG | - | chr5_3:22292372-22292391 | None:intergenic | 25.0% |
| !!! | GGATGAAAAAAGTATTCATA+TGG | - | chr5_3:22292375-22292394 | None:intergenic | 25.0% |
| ! | AATTTACTATCAAAAGCAAG+CGG | - | chr5_3:22292396-22292415 | None:intergenic | 25.0% |
| !!! | AACGTTTCTTATTCTAAAGT+AGG | + | chr5_3:22292416-22292435 | Msa0805610:intron | 25.0% |
| !! | GAAATTGCTATGTATTTTGT+TGG | - | chr5_3:22292476-22292495 | None:intergenic | 25.0% |
| !! | GAACCAAATAATTTAGGTTA+TGG | - | chr5_3:22292498-22292517 | None:intergenic | 25.0% |
| ! | CAATTCAATGTGTTAACAAT+GGG | - | chr5_3:22292968-22292987 | None:intergenic | 25.0% |
| ! | TCAATTCAATGTGTTAACAA+TGG | - | chr5_3:22292969-22292988 | None:intergenic | 25.0% |
| ! | GATTAACAACTTGAAGATAA+GGG | - | chr5_3:22293067-22293086 | None:intergenic | 25.0% |
| ! | AGATTAACAACTTGAAGATA+AGG | - | chr5_3:22293068-22293087 | None:intergenic | 25.0% |
| ! | GTACATTATTTCCTATGTAA+TGG | - | chr5_3:22293118-22293137 | None:intergenic | 25.0% |
| ! | AAAAGACATCTTCTAATGTA+AGG | - | chr5_3:22293310-22293329 | None:intergenic | 25.0% |
| !! | CATTAGAAGATGTCTTTTAT+TGG | + | chr5_3:22293312-22293331 | Msa0805610:intron | 25.0% |
| !!! | TGTTTTTCTCATTTTTGTTG+AGG | + | chr5_3:22293423-22293442 | Msa0805610:intron | 25.0% |
| ! | TAATCAATAATTTACTGCCA+TGG | + | chr5_3:22294469-22294488 | Msa0805610:intron | 25.0% |
| !!! | AGAAATCTCTTTTGAAAAAG+AGG | + | chr5_3:22294498-22294517 | Msa0805610:intron | 25.0% |
| ! | GCATAAAAATATGCAAAGTT+CGG | + | chr5_3:22294862-22294881 | Msa0805610:intron | 25.0% |
| ! | CATAAAAATATGCAAAGTTC+GGG | + | chr5_3:22294863-22294882 | Msa0805610:intron | 25.0% |
| ! | ATAAAAATATGCAAAGTTCG+GGG | + | chr5_3:22294864-22294883 | Msa0805610:intron | 25.0% |
| ! | ACTCAAATGATTAATCACTA+CGG | - | chr5_3:22295242-22295261 | None:intergenic | 25.0% |
| !!! | TCTTTTAGTTGTTTAACTTG+TGG | - | chr5_3:22295491-22295510 | None:intergenic | 25.0% |
| ! | AACAACAAAATCATGTGATA+CGG | - | chr5_3:22296062-22296081 | None:intergenic | 25.0% |
| !!! | TCAATTTTCATTTGATAACG+CGG | + | chr5_3:22296287-22296306 | Msa0805610:intron | 25.0% |
| !!! | TGTTATTGTTACTTTCATGT+GGG | + | chr5_3:22296323-22296342 | Msa0805610:intron | 25.0% |
| !! | GGATCATGTTTTACTTTATT+TGG | + | chr5_3:22296581-22296600 | Msa0805610:intron | 25.0% |
| !! | TTTATTTGGTTTCGTACTTA+CGG | + | chr5_3:22296595-22296614 | Msa0805610:intron | 25.0% |
| ! | TGTATTCATGAATTAGTAGT+AGG | - | chr5_3:22296694-22296713 | None:intergenic | 25.0% |
| !! | TATTTTATGATCAATGCATC+TGG | + | chr5_3:22297462-22297481 | Msa0805610:intron | 25.0% |
| !! | ATTTTATGATCAATGCATCT+GGG | + | chr5_3:22297463-22297482 | Msa0805610:intron | 25.0% |
| !! | AGTATAAAGTCGTTCTTTTA+TGG | + | chr5_3:22297578-22297597 | Msa0805610:intron | 25.0% |
| ! | AATTCAACATTCTTGTCAAA+TGG | - | chr5_3:22297919-22297938 | None:intergenic | 25.0% |
| !! | ATCATTGCTTCTTTGTATTT+TGG | + | chr5_3:22298072-22298091 | Msa0805610:intron | 25.0% |
| ! | GGAGTATAAGATAAAGTATA+TGG | - | chr5_3:22298421-22298440 | None:intergenic | 25.0% |
| ! | GAATACTTAACAATGTCAAA+TGG | - | chr5_3:22298801-22298820 | None:intergenic | 25.0% |
| ! | CATATCTTATCGTATATTAC+GGG | + | chr5_3:22298861-22298880 | Msa0805610:intron | 25.0% |
| ! | GTCTACTTCTTAAGTTTATA+TGG | + | chr5_3:22299174-22299193 | Msa0805610:intron | 25.0% |
| !!! | TCTACAAGTCCATTTTTTTA+AGG | + | chr5_3:22299308-22299327 | Msa0805610:intron | 25.0% |
| !!! | CTACAAGTCCATTTTTTTAA+GGG | + | chr5_3:22299309-22299328 | Msa0805610:intron | 25.0% |
| ! | ACTCAACTTAAATTATACCA+TGG | + | chr5_3:22299341-22299360 | Msa0805610:intron | 25.0% |
| ! | TTAGATTCAATCTAAGTGAA+CGG | - | chr5_3:22299504-22299523 | None:intergenic | 25.0% |
| !! | GGGTCAATAAATTTTAAATG+AGG | - | chr5_3:22299548-22299567 | None:intergenic | 25.0% |
| ! | AAATTCTTAAGGCTGTAAAT+GGG | - | chr5_3:22299568-22299587 | None:intergenic | 25.0% |
| !! | TTCTAAAAATTATGCCATAC+AGG | + | chr5_3:22299680-22299699 | Msa0805610:intron | 25.0% |
| ! | GTTGAGAATATTGTAGTTAT+TGG | + | chr5_3:22299702-22299721 | Msa0805610:CDS | 25.0% |
| ! | AATAAATAAAACTTGCCTTG+CGG | - | chr5_3:22299784-22299803 | None:intergenic | 25.0% |
| ! | TCTTTATAAGAGATATTCCA+GGG | - | chr5_3:22299815-22299834 | None:intergenic | 25.0% |
| ! | TTCTTTATAAGAGATATTCC+AGG | - | chr5_3:22299816-22299835 | None:intergenic | 25.0% |
| ! | TGGAATATCTCTTATAAAGA+AGG | + | chr5_3:22299815-22299834 | Msa0805610:intron | 25.0% |
| ! | ATTTCAACTATGAGATGAAA+GGG | - | chr5_3:22299964-22299983 | None:intergenic | 25.0% |
| !!! | TATTCCTTTTGATTAACCAA+CGG | - | chr5_3:22300069-22300088 | None:intergenic | 25.0% |
| !!! | ACCTCTTGGAATTTTTTTTA+TGG | + | chr5_3:22300089-22300108 | Msa0805610:intron | 25.0% |
| !!! | CCTCTTGGAATTTTTTTTAT+GGG | + | chr5_3:22300090-22300109 | Msa0805610:intron | 25.0% |
| ! | CAATAACTAGTTATTAAGTG+AGG | - | chr5_3:22300295-22300314 | None:intergenic | 25.0% |
| ! | CTCACTTAATAACTAGTTAT+TGG | + | chr5_3:22300293-22300312 | Msa0805610:intron | 25.0% |
| ! | TAGTGAATGTGTTAGAATTA+CGG | - | chr5_3:22300516-22300535 | None:intergenic | 25.0% |
| ! | TTCACTATGATACAAAACTT+AGG | + | chr5_3:22300529-22300548 | Msa0805610:intron | 25.0% |
| !!! | GAGTCATTTTTCTTATGTTA+CGG | - | chr5_3:22300564-22300583 | None:intergenic | 25.0% |
| !! | AAATGACTCACAATTTTTCT+TGG | + | chr5_3:22300575-22300594 | Msa0805610:intron | 25.0% |
| !!! | ACTTGTTTCTAATTTAACCT+TGG | - | chr5_3:22300691-22300710 | None:intergenic | 25.0% |
| !! | GCACATTACAATTTTGTTAA+TGG | + | chr5_3:22300996-22301015 | Msa0805610:CDS | 25.0% |
| ! | AATATAGTTAACATCAGAGT+AGG | - | chr5_3:22301571-22301590 | None:intergenic | 25.0% |
| ! | TTCTCTAGACAATAATTAAG+AGG | + | chr5_3:22301636-22301655 | Msa0805610:three_prime_UTR | 25.0% |
| !! | TGTGAGTTAATAGAAGCATT+GGG | - | chr5_3:22291656-22291675 | None:intergenic | 30.0% |
| ! | ATGTGAGTTAATAGAAGCAT+TGG | - | chr5_3:22291657-22291676 | None:intergenic | 30.0% |
| GGGAATGAAAATGAATTTGA+AGG | - | chr5_3:22291724-22291743 | None:intergenic | 30.0% | |
| TTTCATTCCCTTGTATGTTT+AGG | + | chr5_3:22291734-22291753 | Msa0805610:five_prime_UTR | 30.0% | |
| !!! | CAATTTTTACTTGTTTCTGG+TGG | + | chr5_3:22291903-22291922 | Msa0805610:intron | 30.0% |
| ATGTCTTGAGACAATTTGTA+AGG | - | chr5_3:22292225-22292244 | None:intergenic | 30.0% | |
| ! | TACATATAAGTTGGACTTTG+AGG | - | chr5_3:22292442-22292461 | None:intergenic | 30.0% |
| CAACTTATATGTAGCTCAAA+GGG | + | chr5_3:22292449-22292468 | Msa0805610:intron | 30.0% | |
| CCATCTTAGCATAAAAAAAG+AGG | - | chr5_3:22292712-22292731 | None:intergenic | 30.0% | |
| !!! | CCTCTTTTTTTATGCTAAGA+TGG | + | chr5_3:22292709-22292728 | Msa0805610:intron | 30.0% |
| AAATATACCTACTCTTGGTA+AGG | - | chr5_3:22293023-22293042 | None:intergenic | 30.0% | |
| ! | AGATGTCTTTTATTGGATTG+TGG | + | chr5_3:22293319-22293338 | Msa0805610:intron | 30.0% |
| AGAAAAAACAAAGTGGAATC+TGG | - | chr5_3:22293635-22293654 | None:intergenic | 30.0% | |
| ACTAGCTAGAAAAAACAAAG+TGG | - | chr5_3:22293642-22293661 | None:intergenic | 30.0% | |
| TTGTGTCAAAAATACCTCTA+TGG | + | chr5_3:22293734-22293753 | Msa0805610:intron | 30.0% | |
| ! | ATTCTTAAACACCTTCGTTT+TGG | - | chr5_3:22293761-22293780 | None:intergenic | 30.0% |
| TATATATACGGTCAACAGTT+TGG | - | chr5_3:22294113-22294132 | None:intergenic | 30.0% | |
| ! | AAGAGATTTCTCTTTTTCCA+TGG | - | chr5_3:22294489-22294508 | None:intergenic | 30.0% |
| TGACAACCACTAATTTACAA+AGG | + | chr5_3:22294558-22294577 | Msa0805610:intron | 30.0% | |
| AAGGAAAATAGATAGTGACA+CGG | + | chr5_3:22294577-22294596 | Msa0805610:intron | 30.0% | |
| ACTTTCTATCTCTATTGCTT+TGG | - | chr5_3:22294606-22294625 | None:intergenic | 30.0% | |
| ! | ATATATTTGGGGTCAAATCT+TGG | - | chr5_3:22294742-22294761 | None:intergenic | 30.0% |
| !!! | ACTTTTTTTTTGGTATTGGC+CGG | - | chr5_3:22294898-22294917 | None:intergenic | 30.0% |
| ! | TCTTGCGATGATTTGAAATT+TGG | + | chr5_3:22295099-22295118 | Msa0805610:intron | 30.0% |
| AAAAACTTAGTGGTACAAGT+TGG | - | chr5_3:22295352-22295371 | None:intergenic | 30.0% | |
| !!! | GTTTTTTTCTTGTGTGATAC+TGG | - | chr5_3:22295751-22295770 | None:intergenic | 30.0% |
| AAAACACACACCAAAAAACA+AGG | + | chr5_3:22295766-22295785 | Msa0805610:intron | 30.0% | |
| !!! | TTTACACGAACCTTGTTTTT+TGG | - | chr5_3:22295779-22295798 | None:intergenic | 30.0% |
| !! | ATTTGATTTGAATCTGGTGT+TGG | - | chr5_3:22295823-22295842 | None:intergenic | 30.0% |
| !! | AGCATGATTTGATTTGAATC+TGG | - | chr5_3:22295829-22295848 | None:intergenic | 30.0% |
| GATACGGTAACATAAATGAA+CGG | - | chr5_3:22296046-22296065 | None:intergenic | 30.0% | |
| ! | TTTTTCTTACTTGAGAAGTC+TGG | - | chr5_3:22296188-22296207 | None:intergenic | 30.0% |
| !! | CTGTTATTGTTACTTTCATG+TGG | + | chr5_3:22296322-22296341 | Msa0805610:intron | 30.0% |
| ! | TTACATTACACGGTTTGTTT+GGG | - | chr5_3:22296350-22296369 | None:intergenic | 30.0% |
| AGTCTTGAAACTAACAAAAC+CGG | - | chr5_3:22296515-22296534 | None:intergenic | 30.0% | |
| ! | AGTACATTTTACTGAGATGT+TGG | + | chr5_3:22297223-22297242 | Msa0805610:intron | 30.0% |
| TAATAGAATAGCTGACCTTA+GGG | - | chr5_3:22297316-22297335 | None:intergenic | 30.0% | |
| GCTATTCTATTACTAGTACT+TGG | + | chr5_3:22297324-22297343 | Msa0805610:intron | 30.0% | |
| GTAATTAGTGTAAACGGAAA+TGG | - | chr5_3:22297351-22297370 | None:intergenic | 30.0% | |
| GAAAAGTAAACCTTGTCATA+TGG | - | chr5_3:22297753-22297772 | None:intergenic | 30.0% | |
| TTGAATTCACATGGTGTAAA+AGG | + | chr5_3:22297941-22297960 | Msa0805610:intron | 30.0% | |
| ATACAAAGAAGCAATGATGT+TGG | - | chr5_3:22298070-22298089 | None:intergenic | 30.0% | |
| ATATGCGGTCTTACATTTAA+AGG | + | chr5_3:22298359-22298378 | Msa0805610:intron | 30.0% | |
| TTTGGTTATTGAAATCGTAG+TGG | + | chr5_3:22298948-22298967 | Msa0805610:intron | 30.0% | |
| CTACACTACATTAAATGTTG+TGG | - | chr5_3:22299027-22299046 | None:intergenic | 30.0% | |
| CACAACATTTAATGTAGTGT+AGG | + | chr5_3:22299025-22299044 | Msa0805610:intron | 30.0% | |
| ! | AGACCAGTAAATAAGCATTT+TGG | - | chr5_3:22299232-22299251 | None:intergenic | 30.0% |
| !! | TACTGGTCTTATGTTTGATT+CGG | + | chr5_3:22299243-22299262 | Msa0805610:intron | 30.0% |
| !!! | AATGAACTTTTGACGGATTT+CGG | - | chr5_3:22299369-22299388 | None:intergenic | 30.0% |
| ! | GTGTCTTAATGAACTTTTGA+CGG | - | chr5_3:22299376-22299395 | None:intergenic | 30.0% |
| TCTTATCATCCATCATGTTT+AGG | - | chr5_3:22299452-22299471 | None:intergenic | 30.0% | |
| CAAATTCTTAAGGCTGTAAA+TGG | - | chr5_3:22299569-22299588 | None:intergenic | 30.0% | |
| ACAAAAAAGTAAAATGCTCC+TGG | - | chr5_3:22299653-22299672 | None:intergenic | 30.0% | |
| TACAATATTCTCAACCTGTA+TGG | - | chr5_3:22299697-22299716 | None:intergenic | 30.0% | |
| CATTTCAACTATGAGATGAA+AGG | - | chr5_3:22299965-22299984 | None:intergenic | 30.0% | |
| AATCAAAAGGAATAACCTCT+TGG | + | chr5_3:22300075-22300094 | Msa0805610:intron | 30.0% | |
| CCCATAAAAAAAATTCCAAG+AGG | - | chr5_3:22300093-22300112 | None:intergenic | 30.0% | |
| ! | CGTTGTCGTTTAACATTAAA+AGG | - | chr5_3:22300184-22300203 | None:intergenic | 30.0% |
| AGTTATTAAGTGAGGATTTG+AGG | - | chr5_3:22300287-22300306 | None:intergenic | 30.0% | |
| TAAGTTAAGTAGGGTTTGAT+TGG | - | chr5_3:22300770-22300789 | None:intergenic | 30.0% | |
| TTACTTCCTAATTCAAATGC+AGG | + | chr5_3:22300887-22300906 | Msa0805610:intron | 30.0% | |
| TATATACTGCAAGTTCACTT+TGG | - | chr5_3:22301090-22301109 | None:intergenic | 30.0% | |
| TATCATCAACATTAGTCCTT+TGG | + | chr5_3:22301108-22301127 | Msa0805610:three_prime_UTR | 30.0% | |
| !!! | CCTTTGGAAAAGTATTTTGT+CGG | + | chr5_3:22301124-22301143 | Msa0805610:three_prime_UTR | 30.0% |
| !!! | AGTATTTTGTCGGTTCTAAT+TGG | + | chr5_3:22301134-22301153 | Msa0805610:three_prime_UTR | 30.0% |
| AATGTATGTTTCTTTCTCGA+TGG | - | chr5_3:22301165-22301184 | None:intergenic | 30.0% | |
| GTGAGTAAATATTCTCACAT+TGG | + | chr5_3:22301365-22301384 | Msa0805610:three_prime_UTR | 30.0% | |
| AAATAGATGCAAAGACACAA+TGG | - | chr5_3:22301608-22301627 | None:intergenic | 30.0% | |
| ATCTTCTTCACCTTTACTTG+TGG | + | chr5_3:22291554-22291573 | Msa0805610:five_prime_UTR | 35.0% | |
| TGTTGTTAAGCCACAAGTAA+AGG | - | chr5_3:22291567-22291586 | None:intergenic | 35.0% | |
| TATGCAAAGCACACATGAAA+AGG | - | chr5_3:22291694-22291713 | None:intergenic | 35.0% | |
| CAAACAGTAAATAGTTGGAG+AGG | - | chr5_3:22291870-22291889 | None:intergenic | 35.0% | |
| AAGGAAACACCAACAGTAAA+TGG | + | chr5_3:22292283-22292302 | Msa0805610:intron | 35.0% | |
| AGGAAACACCAACAGTAAAT+GGG | + | chr5_3:22292284-22292303 | Msa0805610:intron | 35.0% | |
| CCTTTGAGCTACATATAAGT+TGG | - | chr5_3:22292451-22292470 | None:intergenic | 35.0% | |
| CCAACTTATATGTAGCTCAA+AGG | + | chr5_3:22292448-22292467 | Msa0805610:intron | 35.0% | |
| AAGAGGACCAAAGAGATAAA+TGG | + | chr5_3:22292575-22292594 | Msa0805610:exon | 35.0% | |
| CTAAGATGGAGCAAAAGAAA+TGG | + | chr5_3:22292723-22292742 | Msa0805610:intron | 35.0% | |
| TGTGTTAACAATGGGTACTT+TGG | - | chr5_3:22292960-22292979 | None:intergenic | 35.0% | |
| TCACAATACATAGTCCTACA+AGG | + | chr5_3:22292991-22293010 | Msa0805610:intron | 35.0% | |
| GGACAAAATATACCTACTCT+TGG | - | chr5_3:22293028-22293047 | None:intergenic | 35.0% | |
| AAGGGAACACATAAAGCAAT+AGG | - | chr5_3:22293049-22293068 | None:intergenic | 35.0% | |
| ! | TTCCTATGTAATGGGAAGAT+GGG | - | chr5_3:22293109-22293128 | None:intergenic | 35.0% |
| ! | TTTCCTATGTAATGGGAAGA+TGG | - | chr5_3:22293110-22293129 | None:intergenic | 35.0% |
| AAAACAAAGTGGAATCTGGT+GGG | - | chr5_3:22293631-22293650 | None:intergenic | 35.0% | |
| AAAAACAAAGTGGAATCTGG+TGG | - | chr5_3:22293632-22293651 | None:intergenic | 35.0% | |
| ! | TTCTTAAACACCTGCGTTTT+TGG | - | chr5_3:22293704-22293723 | None:intergenic | 35.0% |
| ATTATTGAGTCAAAAAGGGC+AGG | - | chr5_3:22294453-22294472 | None:intergenic | 35.0% | |
| CACAAAAGTTGTCACTCAAA+TGG | - | chr5_3:22294540-22294559 | None:intergenic | 35.0% | |
| GAGAGATAAAGTTGTCACAT+AGG | + | chr5_3:22294645-22294664 | Msa0805610:intron | 35.0% | |
| TCACATAGGTTGTCACAAAA+TGG | + | chr5_3:22294659-22294678 | Msa0805610:intron | 35.0% | |
| !!! | TTTTTTTTTGGTATTGGCCG+GGG | - | chr5_3:22294896-22294915 | None:intergenic | 35.0% |
| !!! | CTTTTTTTTTGGTATTGGCC+GGG | - | chr5_3:22294897-22294916 | None:intergenic | 35.0% |
| AACTTACAAACCGTGATAAG+TGG | + | chr5_3:22295634-22295653 | Msa0805610:intron | 35.0% | |
| ! | TGATTTGTGACGTGAATTGT+AGG | - | chr5_3:22295864-22295883 | None:intergenic | 35.0% |
| ATGAAATCAGAAGGAAGACA+TGG | + | chr5_3:22296126-22296145 | Msa0805610:intron | 35.0% | |
| AAATTGACGCTAAAAGACAG+CGG | - | chr5_3:22296274-22296293 | None:intergenic | 35.0% | |
| !!! | ATTTTCATTTGATAACGCGG+AGG | + | chr5_3:22296290-22296309 | Msa0805610:intron | 35.0% |
| ! | GTTACATTACACGGTTTGTT+TGG | - | chr5_3:22296351-22296370 | None:intergenic | 35.0% |
| ACGGAAAACGTTACATTACA+CGG | - | chr5_3:22296360-22296379 | None:intergenic | 35.0% | |
| TGAAACTAACAAAACCGGAT+CGG | - | chr5_3:22296510-22296529 | None:intergenic | 35.0% | |
| ! | TGATTTTACTGTGCGTGTTT+AGG | + | chr5_3:22296555-22296574 | Msa0805610:intron | 35.0% |
| AAAATTTCCCCCTCAACTTA+CGG | - | chr5_3:22297163-22297182 | None:intergenic | 35.0% | |
| ! | ACATTTTACTGAGATGTTGG+TGG | + | chr5_3:22297226-22297245 | Msa0805610:intron | 35.0% |
| ! | CATTTTACTGAGATGTTGGT+GGG | + | chr5_3:22297227-22297246 | Msa0805610:intron | 35.0% |
| GTAATAGAATAGCTGACCTT+AGG | - | chr5_3:22297317-22297336 | None:intergenic | 35.0% | |
| GAACGCGTAATTAGTGTAAA+CGG | - | chr5_3:22297357-22297376 | None:intergenic | 35.0% | |
| TCTCACTAACAGCATTATAG+TGG | + | chr5_3:22297425-22297444 | Msa0805610:intron | 35.0% | |
| TATAGTGCACATGCAGTTTA+TGG | + | chr5_3:22297629-22297648 | Msa0805610:intron | 35.0% | |
| GGAAATCCAAAATGTGAGAA+GGG | - | chr5_3:22297683-22297702 | None:intergenic | 35.0% | |
| TGGAAATCCAAAATGTGAGA+AGG | - | chr5_3:22297684-22297703 | None:intergenic | 35.0% | |
| ! | TCACATTTTGGATTTCCAAC+CGG | + | chr5_3:22297686-22297705 | Msa0805610:CDS | 35.0% |
| AAGTAAACCTTGTCATATGG+TGG | - | chr5_3:22297750-22297769 | None:intergenic | 35.0% | |
| TGAAGTGACTTCAAACATGT+AGG | - | chr5_3:22297975-22297994 | None:intergenic | 35.0% | |
| ATGTAAGACCGCATATTCAA+TGG | - | chr5_3:22298355-22298374 | None:intergenic | 35.0% | |
| AGTATATGGTGAAGAAAGAG+AGG | - | chr5_3:22298407-22298426 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr5_3:22298682-22298701 | None:intergenic | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr5_3:22298447-22298466 | Msa0805610:intron | 35.0% |
| TGTGAGAGAAAAGTTGAAGA+GGG | + | chr5_3:22298582-22298601 | Msa0805610:intron | 35.0% | |
| AAAGTTGAAGAGGGTAAAGT+TGG | + | chr5_3:22298591-22298610 | Msa0805610:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr5_3:22298682-22298701 | Msa0805610:intron | 35.0% |
| !! | TTATTATATGGTGGGTCTCT+TGG | + | chr5_3:22298719-22298738 | Msa0805610:intron | 35.0% |
| TATGAAAATTGAGATGCGTG+TGG | - | chr5_3:22298845-22298864 | None:intergenic | 35.0% | |
| GGACCAAAATGCTTATTTAC+TGG | + | chr5_3:22299226-22299245 | Msa0805610:intron | 35.0% | |
| ATGTCAAGTCCTAAACATGA+TGG | + | chr5_3:22299440-22299459 | Msa0805610:intron | 35.0% | |
| !! | ATGTCTTTCTCTAAAACTCC+AGG | + | chr5_3:22299632-22299651 | Msa0805610:intron | 35.0% |
| ATAACATGATCTATCACCGT+TGG | + | chr5_3:22300050-22300069 | Msa0805610:intron | 35.0% | |
| ! | ATCACCGTTGGTTAATCAAA+AGG | + | chr5_3:22300062-22300081 | Msa0805610:intron | 35.0% |
| ACAGTGATTTCATTGAGCAA+TGG | + | chr5_3:22300640-22300659 | Msa0805610:intron | 35.0% | |
| CAGTGATTTCATTGAGCAAT+GGG | + | chr5_3:22300641-22300660 | Msa0805610:intron | 35.0% | |
| AAGCTGTGAATGTATCTCTT+GGG | + | chr5_3:22300910-22300929 | Msa0805610:CDS | 35.0% | |
| ACTTATCCATTTGTGAGAGA+TGG | + | chr5_3:22300942-22300961 | Msa0805610:CDS | 35.0% | |
| ! | AAGAAAACCCTTGCTTTGAA+AGG | + | chr5_3:22300972-22300991 | Msa0805610:CDS | 35.0% |
| AAATGGATACAGAGGGTAAA+AGG | - | chr5_3:22301052-22301071 | None:intergenic | 35.0% | |
| TTACCCTCTGTATCCATTTA+AGG | + | chr5_3:22301053-22301072 | Msa0805610:CDS | 35.0% | |
| AGACCTTAAATGGATACAGA+GGG | - | chr5_3:22301059-22301078 | None:intergenic | 35.0% | |
| ! | CCGACAAAATACTTTTCCAA+AGG | - | chr5_3:22301127-22301146 | None:intergenic | 35.0% |
| TAGCACATAGACCTTTAAGT+TGG | + | chr5_3:22301332-22301351 | Msa0805610:three_prime_UTR | 35.0% | |
| TTAAACCAGTGACTCGAATT+TGG | + | chr5_3:22301525-22301544 | Msa0805610:three_prime_UTR | 35.0% | |
| AGTTAACATCAGAGTAGGAA+AGG | - | chr5_3:22301566-22301585 | None:intergenic | 35.0% | |
| GTGTGTGCCTAAACATACAA+GGG | - | chr5_3:22291744-22291763 | None:intergenic | 40.0% | |
| TGTGTGTGCCTAAACATACA+AGG | - | chr5_3:22291745-22291764 | None:intergenic | 40.0% | |
| ACAGTAAATAGTTGGAGAGG+TGG | - | chr5_3:22291867-22291886 | None:intergenic | 40.0% | |
| CTGGTGGTAGAAATGACATT+TGG | + | chr5_3:22291919-22291938 | Msa0805610:intron | 40.0% | |
| GTTGGAAAATGGAAGACAGA+AGG | - | chr5_3:22292310-22292329 | None:intergenic | 40.0% | |
| ! | TTTTCCTGCAAATGCAAAGC+AGG | + | chr5_3:22292549-22292568 | Msa0805610:intron | 40.0% |
| TTTCCTGCAAATGCAAAGCA+GGG | + | chr5_3:22292550-22292569 | Msa0805610:intron | 40.0% | |
| GACCAAAGAGATAAATGGCT+GGG | + | chr5_3:22292580-22292599 | Msa0805610:exon | 40.0% | |
| ACCAAAGAGATAAATGGCTG+GGG | + | chr5_3:22292581-22292600 | Msa0805610:exon | 40.0% | |
| TTGCACAAGCAAGATTGTCT+CGG | + | chr5_3:22292629-22292648 | Msa0805610:CDS | 40.0% | |
| CAAAAGAAATGGCTTAACGC+AGG | + | chr5_3:22292734-22292753 | Msa0805610:intron | 40.0% | |
| ! | TCCTATGTAATGGGAAGATG+GGG | - | chr5_3:22293108-22293127 | None:intergenic | 40.0% |
| AATGTTGTCTCTAACGTACG+CGG | + | chr5_3:22293349-22293368 | Msa0805610:intron | 40.0% | |
| GAAAACAAAAAGGCGGTGTA+AGG | - | chr5_3:22293541-22293560 | None:intergenic | 40.0% | |
| AGTCACCCAAATAAAAGACG+TGG | - | chr5_3:22293578-22293597 | None:intergenic | 40.0% | |
| AAACAAAGTGGAATCTGGTG+GGG | - | chr5_3:22293630-22293649 | None:intergenic | 40.0% | |
| !! | TTAAACACCTGCGTTTTTGG+AGG | - | chr5_3:22293701-22293720 | None:intergenic | 40.0% |
| !! | CTTAGTGGTACAAGTTGGTA+TGG | - | chr5_3:22295347-22295366 | None:intergenic | 40.0% |
| GTGTGATACTGGTGAGATTT+GGG | - | chr5_3:22295740-22295759 | None:intergenic | 40.0% | |
| TGTGTGATACTGGTGAGATT+TGG | - | chr5_3:22295741-22295760 | None:intergenic | 40.0% | |
| ! | TCTCTCTCTCTCTCGATTTT+CGG | + | chr5_3:22296221-22296240 | Msa0805610:intron | 40.0% |
| ! | TTACTGTGCGTGTTTAGGAT+CGG | + | chr5_3:22296560-22296579 | Msa0805610:intron | 40.0% |
| GGTTTCGTACTTACGGAATT+AGG | + | chr5_3:22296602-22296621 | Msa0805610:intron | 40.0% | |
| TCAGGATTCTTCCTGAAAAG+AGG | - | chr5_3:22297263-22297282 | None:intergenic | 40.0% | |
| ! | CACATTTTGGATTTCCAACC+GGG | + | chr5_3:22297687-22297706 | Msa0805610:CDS | 40.0% |
| TGACTTCAAACATGTAGGTG+GGG | - | chr5_3:22297970-22297989 | None:intergenic | 40.0% | |
| GTGACTTCAAACATGTAGGT+GGG | - | chr5_3:22297971-22297990 | None:intergenic | 40.0% | |
| AGTGACTTCAAACATGTAGG+TGG | - | chr5_3:22297972-22297991 | None:intergenic | 40.0% | |
| ! | TCATTTTGGACTGCCTGTTT+TGG | + | chr5_3:22298257-22298276 | Msa0805610:intron | 40.0% |
| ! | CTGACTTGAAACACCAAAAC+AGG | - | chr5_3:22298273-22298292 | None:intergenic | 40.0% |
| !!! | TCTGACTGGCCTTTTTGTTT+TGG | + | chr5_3:22298301-22298320 | Msa0805610:intron | 40.0% |
| CTTGGTCTGCCAAAACAAAA+AGG | - | chr5_3:22298313-22298332 | None:intergenic | 40.0% | |
| !! | GTTTTGGCAGACCAAGTATT+CGG | + | chr5_3:22298317-22298336 | Msa0805610:intron | 40.0% |
| ! | TTTTGGCAGACCAAGTATTC+GGG | + | chr5_3:22298318-22298337 | Msa0805610:intron | 40.0% |
| ATATGGTGAAGAAAGAGAGG+CGG | - | chr5_3:22298404-22298423 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+TGG | - | chr5_3:22298686-22298705 | None:intergenic | 40.0% |
| GTGTGAGAGAAAAGTTGAAG+AGG | + | chr5_3:22298581-22298600 | Msa0805610:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr5_3:22298686-22298705 | Msa0805610:intron | 40.0% |
| TCTTCATCCTTGCAATTTCG+CGG | + | chr5_3:22299205-22299224 | Msa0805610:intron | 40.0% | |
| TCATGTCTATCCCAGATGAT+GGG | + | chr5_3:22299754-22299773 | Msa0805610:CDS | 40.0% | |
| AAATAAAACTTGCCTTGCGG+TGG | - | chr5_3:22299781-22299800 | None:intergenic | 40.0% | |
| CTGTGAATCAGCAACATACT+TGG | - | chr5_3:22299937-22299956 | None:intergenic | 40.0% | |
| TCCAAATTTGCAATCCAGCA+AGG | + | chr5_3:22300664-22300683 | Msa0805610:CDS | 40.0% | |
| ACCTTGCTGGATTGCAAATT+TGG | - | chr5_3:22300668-22300687 | None:intergenic | 40.0% | |
| AATTTAACCTTGGACCTTGC+TGG | - | chr5_3:22300681-22300700 | None:intergenic | 40.0% | |
| CAGCTTCCTGCATTTGAATT+AGG | - | chr5_3:22300896-22300915 | None:intergenic | 40.0% | |
| GAAGCTGTGAATGTATCTCT+TGG | + | chr5_3:22300909-22300928 | Msa0805610:CDS | 40.0% | |
| ACAACACCATCTCTCACAAA+TGG | - | chr5_3:22300951-22300970 | None:intergenic | 40.0% | |
| ATGTGCTCCTTTCAAAGCAA+GGG | - | chr5_3:22300982-22301001 | None:intergenic | 40.0% | |
| AATGTGCTCCTTTCAAAGCA+AGG | - | chr5_3:22300983-22301002 | None:intergenic | 40.0% | |
| ! | TTAATGGCACTTTTGAGCTG+TGG | + | chr5_3:22301012-22301031 | Msa0805610:CDS | 40.0% |
| ! | TAATGGCACTTTTGAGCTGT+GGG | + | chr5_3:22301013-22301032 | Msa0805610:CDS | 40.0% |
| GAGACCTTAAATGGATACAG+AGG | - | chr5_3:22301060-22301079 | None:intergenic | 40.0% | |
| CACTTGACACTCCAACTTAA+AGG | - | chr5_3:22301346-22301365 | None:intergenic | 40.0% | |
| !! | AAACCATTTGTTCGAGTTGC+CGG | + | chr5_3:22301473-22301492 | Msa0805610:three_prime_UTR | 40.0% |
| AACTAGCCCTTGAAATTCTC+CGG | - | chr5_3:22301495-22301514 | None:intergenic | 40.0% | |
| TCTATCCAAATTCGAGTCAC+TGG | - | chr5_3:22301533-22301552 | None:intergenic | 40.0% | |
| CTCGAATTTGGATAGAAAGC+AGG | + | chr5_3:22301537-22301556 | Msa0805610:three_prime_UTR | 40.0% | |
| ! | TCAGCACCATTTTCATGCAG+AGG | + | chr5_3:22291777-22291796 | Msa0805610:five_prime_UTR | 45.0% |
| ! | CAGCACCATTTTCATGCAGA+GGG | + | chr5_3:22291778-22291797 | Msa0805610:five_prime_UTR | 45.0% |
| ! | AGCACCATTTTCATGCAGAG+GGG | + | chr5_3:22291779-22291798 | Msa0805610:five_prime_UTR | 45.0% |
| TTTGCCCCTCTGCATGAAAA+TGG | - | chr5_3:22291786-22291805 | None:intergenic | 45.0% | |
| GTAAATAGTTGGAGAGGTGG+AGG | - | chr5_3:22291864-22291883 | None:intergenic | 45.0% | |
| ACAGAAGGCCCATTTACTGT+TGG | - | chr5_3:22292295-22292314 | None:intergenic | 45.0% | |
| AAATGCAAAGCAGGGTGAAG+AGG | + | chr5_3:22292558-22292577 | Msa0805610:intron | 45.0% | |
| GGACCAAAGAGATAAATGGC+TGG | + | chr5_3:22292579-22292598 | Msa0805610:exon | 45.0% | |
| AAGAAATGGCTTAACGCAGG+AGG | + | chr5_3:22292737-22292756 | Msa0805610:intron | 45.0% | |
| ! | CTATGTAATGGGAAGATGGG+GGG | - | chr5_3:22293106-22293125 | None:intergenic | 45.0% |
| ! | CCTATGTAATGGGAAGATGG+GGG | - | chr5_3:22293107-22293126 | None:intergenic | 45.0% |
| AAAAGGCGGTGTAAGGAATC+AGG | - | chr5_3:22293534-22293553 | None:intergenic | 45.0% | |
| !! | GGCCACCACGTCTTTTATTT+GGG | + | chr5_3:22293570-22293589 | Msa0805610:intron | 45.0% |
| CACCCAAATAAAAGACGTGG+TGG | - | chr5_3:22293575-22293594 | None:intergenic | 45.0% | |
| AACAAAGTGGAATCTGGTGG+GGG | - | chr5_3:22293629-22293648 | None:intergenic | 45.0% | |
| ACCTCTATGGTCCAAAACGA+AGG | + | chr5_3:22293747-22293766 | Msa0805610:intron | 45.0% | |
| !! | ACCTTCGTTTTGGACCATAG+AGG | - | chr5_3:22293751-22293770 | None:intergenic | 45.0% |
| TGACGCGGTAGCTATATAGA+GGG | - | chr5_3:22295685-22295704 | None:intergenic | 45.0% | |
| TTGACGCGGTAGCTATATAG+AGG | - | chr5_3:22295686-22295705 | None:intergenic | 45.0% | |
| AATCAGAAGGAAGACATGGC+TGG | + | chr5_3:22296130-22296149 | Msa0805610:intron | 45.0% | |
| !! | TTCATTTGATAACGCGGAGG+TGG | + | chr5_3:22296293-22296312 | Msa0805610:intron | 45.0% |
| !! | GTTAAACGGCTTTGAACCGT+TGG | - | chr5_3:22296473-22296492 | None:intergenic | 45.0% |
| ATCCTCTCATCCGGGTTAAA+CGG | - | chr5_3:22296487-22296506 | None:intergenic | 45.0% | |
| CCTCAACTTACGGCATAGTT+GGG | - | chr5_3:22297153-22297172 | None:intergenic | 45.0% | |
| ! | CCAACTATGCCGTAAGTTGA+GGG | + | chr5_3:22297151-22297170 | Msa0805610:intron | 45.0% |
| ! | CAACTATGCCGTAAGTTGAG+GGG | + | chr5_3:22297152-22297171 | Msa0805610:intron | 45.0% |
| ! | AACTATGCCGTAAGTTGAGG+GGG | + | chr5_3:22297153-22297172 | Msa0805610:intron | 45.0% |
| AGGAAGAATCCTGAGCTGTA+CGG | + | chr5_3:22297269-22297288 | Msa0805610:intron | 45.0% | |
| ! | AGTGTGCCCTTCTCACATTT+TGG | + | chr5_3:22297674-22297693 | Msa0805610:CDS | 45.0% |
| GAACCATGTTGGCGATGTTA+CGG | - | chr5_3:22297728-22297747 | None:intergenic | 45.0% | |
| ! | GTCATATGGTGGAACCATGT+TGG | - | chr5_3:22297739-22297758 | None:intergenic | 45.0% |
| CATGGTTCCACCATATGACA+AGG | + | chr5_3:22297740-22297759 | Msa0805610:CDS | 45.0% | |
| AGTCAGACACAAAGTCTGAC+TGG | + | chr5_3:22298287-22298306 | Msa0805610:intron | 45.0% | |
| !! | ATGAGTGTCGCTTTAGGCTT+TGG | + | chr5_3:22298453-22298472 | Msa0805610:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr5_3:22298685-22298704 | Msa0805610:intron | 45.0% |
| CTCTTGGAACAGTGGAAGTT+TGG | + | chr5_3:22298735-22298754 | Msa0805610:intron | 45.0% | |
| GAACAGTGGAAGTTTGGTAG+AGG | + | chr5_3:22298741-22298760 | Msa0805610:intron | 45.0% | |
| ! | TTTTGGTCCGCGAAATTGCA+AGG | - | chr5_3:22299215-22299234 | None:intergenic | 45.0% |
| !! | TTTGACGGATTTCGGTACCA+TGG | - | chr5_3:22299361-22299380 | None:intergenic | 45.0% |
| CTCATGTCTATCCCAGATGA+TGG | + | chr5_3:22299753-22299772 | Msa0805610:CDS | 45.0% | |
| CGACAACGTATCATCACTCA+CGG | + | chr5_3:22300196-22300215 | Msa0805610:intron | 45.0% | |
| GACAACGTATCATCACTCAC+GGG | + | chr5_3:22300197-22300216 | Msa0805610:intron | 45.0% | |
| GCAGTGCACAAACTGTGAAA+AGG | + | chr5_3:22300728-22300747 | Msa0805610:CDS | 45.0% | |
| ! | GGTGTTGGAGAGACCTTAAA+TGG | - | chr5_3:22301069-22301088 | None:intergenic | 45.0% |
| ! | CTGCAAGTTCACTTTGGTGT+TGG | - | chr5_3:22301084-22301103 | None:intergenic | 45.0% |
| GAGTTGCCGGAGAATTTCAA+GGG | + | chr5_3:22301486-22301505 | Msa0805610:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTATAATATAGTTTA+TGG | + | chr5_3:22293162-22293181 | Msa0805610:intron | 5.0% |
| !! | TAATTGAAAAATTATTTAAT+TGG | + | chr5_3:22293205-22293224 | Msa0805610:intron | 5.0% |
| !! | AAAATTAAAAAACATATATT+GGG | - | chr5_3:22294058-22294077 | None:intergenic | 5.0% |
| !! | TAAAATTAAAAAACATATAT+TGG | - | chr5_3:22294059-22294078 | None:intergenic | 5.0% |
| !!! | TAATTTTATGAAAAATTATT+TGG | + | chr5_3:22294071-22294090 | Msa0805610:intron | 5.0% |
| !!! | TTTAATCTTTTTATATATTT+GGG | - | chr5_3:22294754-22294773 | None:intergenic | 5.0% |
| !!! | ATTTAATCTTTTTATATATT+TGG | - | chr5_3:22294755-22294774 | None:intergenic | 5.0% |
| !!! | TTTAAAAAATACTTTTTTTT+TGG | - | chr5_3:22294908-22294927 | None:intergenic | 5.0% |
| !! | ATAAAAAATTAAAACTAATT+AGG | - | chr5_3:22297388-22297407 | None:intergenic | 5.0% |
| !! | TAAAATATTAAATTACAATT+TGG | - | chr5_3:22300870-22300889 | None:intergenic | 5.0% |
| !!! | TTTTTTTAAATTTCATTTTA+AGG | + | chr5_3:22301284-22301303 | Msa0805610:three_prime_UTR | 5.0% |
| TCACCCTGCTTTGCATTTGC+AGG | - | chr5_3:22292556-22292575 | None:intergenic | 50.0% | |
| GCCCCAGCCATTTATCTCTT+TGG | - | chr5_3:22292585-22292604 | None:intergenic | 50.0% | |
| AAATGGCTTAACGCAGGAGG+AGG | + | chr5_3:22292740-22292759 | Msa0805610:intron | 50.0% | |
| TGGTAAGGCATGTGCCTTGT+AGG | - | chr5_3:22293008-22293027 | None:intergenic | 50.0% | |
| GCACATGCCTTACCAAGAGT+AGG | + | chr5_3:22293013-22293032 | Msa0805610:intron | 50.0% | |
| CCCCCATCTTCCCATTACAT+AGG | + | chr5_3:22293104-22293123 | Msa0805610:intron | 50.0% | |
| ! | GGGCCACCACGTCTTTTATT+TGG | + | chr5_3:22293569-22293588 | Msa0805610:intron | 50.0% |
| GTACAAGCCTCCAAAAACGC+AGG | + | chr5_3:22293691-22293710 | Msa0805610:intron | 50.0% | |
| TGGATCACGACGTGAGACTT+GGG | - | chr5_3:22294722-22294741 | None:intergenic | 50.0% | |
| TTGGATCACGACGTGAGACT+TGG | - | chr5_3:22294723-22294742 | None:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | + | chr5_3:22294834-22294853 | Msa0805610:intron | 50.0% | |
| AAAGTTCGGGGTTCAAACCC+CGG | + | chr5_3:22294876-22294895 | Msa0805610:intron | 50.0% | |
| ! | GCTGGGTATGCCACTTATCA+CGG | - | chr5_3:22295647-22295666 | None:intergenic | 50.0% |
| GACGCGGTAGCTATATAGAG+GGG | - | chr5_3:22295684-22295703 | None:intergenic | 50.0% | |
| CATGGCTGGAGAAACATTCG+AGG | + | chr5_3:22296144-22296163 | Msa0805610:CDS | 50.0% | |
| AAGTCTGGTCAGAGTTGCGA+TGG | - | chr5_3:22296173-22296192 | None:intergenic | 50.0% | |
| !! | ATTTGATAACGCGGAGGTGG+TGG | + | chr5_3:22296296-22296315 | Msa0805610:intron | 50.0% |
| TTCAGGGAGAAAGCTGAGCT+TGG | + | chr5_3:22296400-22296419 | Msa0805610:intron | 50.0% | |
| CGTCAGCTCCTTGATCTTCA+CGG | - | chr5_3:22296437-22296456 | None:intergenic | 50.0% | |
| CGTGAAGATCAAGGAGCTGA+CGG | + | chr5_3:22296435-22296454 | Msa0805610:CDS | 50.0% | |
| CGGTTCAAAGCCGTTTAACC+CGG | + | chr5_3:22296474-22296493 | Msa0805610:CDS | 50.0% | |
| CCCAACTATGCCGTAAGTTG+AGG | + | chr5_3:22297150-22297169 | Msa0805610:intron | 50.0% | |
| CCCTCAACTTACGGCATAGT+TGG | - | chr5_3:22297154-22297173 | None:intergenic | 50.0% | |
| ! | GTGCTGTACGTCCTCTTTTC+AGG | + | chr5_3:22297249-22297268 | Msa0805610:intron | 50.0% |
| CTGTACGGTGAACTTGCCAA+AGG | + | chr5_3:22297284-22297303 | Msa0805610:CDS | 50.0% | |
| AATAGCTGACCTTAGGGCTC+TGG | - | chr5_3:22297310-22297329 | None:intergenic | 50.0% | |
| AGACCAAGTATTCGGGAGCA+GGG | + | chr5_3:22298325-22298344 | Msa0805610:intron | 50.0% | |
| GTTATTGGACACAGCTGCTG+TGG | + | chr5_3:22299717-22299736 | Msa0805610:CDS | 50.0% | |
| ! | AGCTGCTGTGGAGGCATAAA+GGG | + | chr5_3:22299729-22299748 | Msa0805610:CDS | 50.0% |
| CGTATCATCACTCACGGGAA+AGG | + | chr5_3:22300202-22300221 | Msa0805610:intron | 50.0% | |
| TTGCAATCCAGCAAGGTCCA+AGG | + | chr5_3:22300671-22300690 | Msa0805610:CDS | 50.0% | |
| TCTCCGGCAACTCGAACAAA+TGG | - | chr5_3:22301479-22301498 | None:intergenic | 50.0% | |
| CGAGTTGCCGGAGAATTTCA+AGG | + | chr5_3:22301485-22301504 | Msa0805610:three_prime_UTR | 50.0% | |
| CTCTAACGTACGCGGTGCAT+AGG | + | chr5_3:22293357-22293376 | Msa0805610:intron | 55.0% | |
| AAGTGGAATCTGGTGGGGGT+GGG | - | chr5_3:22293625-22293644 | None:intergenic | 55.0% | |
| AAAGTGGAATCTGGTGGGGG+TGG | - | chr5_3:22293626-22293645 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr5_3:22294833-22294852 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr5_3:22294830-22294849 | Msa0805610:intron | 55.0% | |
| CAGCTCCTTGATCTTCACGG+CGG | - | chr5_3:22296434-22296453 | None:intergenic | 55.0% | |
| GAAGATCAAGGAGCTGACGG+CGG | + | chr5_3:22296438-22296457 | Msa0805610:CDS | 55.0% | |
| AGCCGTTTAACCCGGATGAG+AGG | + | chr5_3:22296482-22296501 | Msa0805610:CDS | 55.0% | |
| GCAAGTTCACCGTACAGCTC+AGG | - | chr5_3:22297281-22297300 | None:intergenic | 55.0% | |
| GGCGATGTTACGGACCACAA+AGG | - | chr5_3:22297718-22297737 | None:intergenic | 55.0% | |
| GGTCCGTAACATCGCCAACA+TGG | + | chr5_3:22297722-22297741 | Msa0805610:CDS | 55.0% | |
| CAGACCAAGTATTCGGGAGC+AGG | + | chr5_3:22298324-22298343 | Msa0805610:intron | 55.0% | |
| GACCAAGTATTCGGGAGCAG+GGG | + | chr5_3:22298326-22298345 | Msa0805610:intron | 55.0% | |
| AGGGGCGGCCATTGAATATG+CGG | + | chr5_3:22298344-22298363 | Msa0805610:intron | 55.0% | |
| TGGTGAAGAAAGAGAGGCGG+TGG | - | chr5_3:22298401-22298420 | None:intergenic | 55.0% | |
| ! | TGGTGGGTCTCTTGGAACAG+TGG | + | chr5_3:22298727-22298746 | Msa0805610:intron | 55.0% |
| ATTGGACACAGCTGCTGTGG+AGG | + | chr5_3:22299720-22299739 | Msa0805610:CDS | 55.0% | |
| ! | CAGCTGCTGTGGAGGCATAA+AGG | + | chr5_3:22299728-22299747 | Msa0805610:CDS | 55.0% |
| ! | GCTGCTGTGGAGGCATAAAG+GGG | + | chr5_3:22299730-22299749 | Msa0805610:CDS | 55.0% |
| TTGCGGTGGTCCCATCATCT+GGG | - | chr5_3:22299767-22299786 | None:intergenic | 55.0% | |
| CATCACTCACGGGAAAGGAG+AGG | + | chr5_3:22300207-22300226 | Msa0805610:intron | 55.0% | |
| ATCTGGTGGGGGTGGGACTT+GGG | - | chr5_3:22293618-22293637 | None:intergenic | 60.0% | |
| AATCTGGTGGGGGTGGGACT+TGG | - | chr5_3:22293619-22293638 | None:intergenic | 60.0% | |
| CATCGCCGCCGTGAAGATCA+AGG | + | chr5_3:22296426-22296445 | Msa0805610:CDS | 60.0% | |
| ACGGCGGAGTTAGAGGCCAA+CGG | + | chr5_3:22296454-22296473 | Msa0805610:CDS | 60.0% | |
| CGGATCGGATCCTCTCATCC+GGG | - | chr5_3:22296495-22296514 | None:intergenic | 60.0% | |
| CCGGATCGGATCCTCTCATC+CGG | - | chr5_3:22296496-22296515 | None:intergenic | 60.0% | |
| CCGGATGAGAGGATCCGATC+CGG | + | chr5_3:22296493-22296512 | Msa0805610:CDS | 60.0% | |
| TGCCAAAGGCCAGAGCCCTA+AGG | + | chr5_3:22297298-22297317 | Msa0805610:CDS | 60.0% | |
| ! | GACCTTAGGGCTCTGGCCTT+TGG | - | chr5_3:22297303-22297322 | None:intergenic | 60.0% |
| CCACAAAGGCTTCACCCGGT+TGG | - | chr5_3:22297704-22297723 | None:intergenic | 60.0% | |
| CCAACCGGGTGAAGCCTTTG+TGG | + | chr5_3:22297701-22297720 | Msa0805610:CDS | 60.0% | |
| CGGACCACAAAGGCTTCACC+CGG | - | chr5_3:22297708-22297727 | None:intergenic | 60.0% | |
| CAAGTATTCGGGAGCAGGGG+CGG | + | chr5_3:22298329-22298348 | Msa0805610:intron | 60.0% | |
| CTTGCGGTGGTCCCATCATC+TGG | - | chr5_3:22299768-22299787 | None:intergenic | 60.0% | |
| !! | CAGATGATGGGACCACCGCA+AGG | + | chr5_3:22299766-22299785 | Msa0805610:CDS | 60.0% |
| TCTGGTGGGGGTGGGACTTG+GGG | - | chr5_3:22293617-22293636 | None:intergenic | 65.0% | |
| GTGGCATACCCAGCGCGTTG+TGG | + | chr5_3:22295653-22295672 | Msa0805610:intron | 65.0% | |
| GGGAGAGACCACAACGCGCT+GGG | - | chr5_3:22295664-22295683 | None:intergenic | 65.0% | |
| GGAGCTGACGGCGGAGTTAG+AGG | + | chr5_3:22296447-22296466 | Msa0805610:CDS | 65.0% | |
| CGCCCCTGCTCCCGAATACT+TGG | - | chr5_3:22298331-22298350 | None:intergenic | 65.0% | |
| GGGGAGAGACCACAACGCGC+TGG | - | chr5_3:22295665-22295684 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 22291532 | 22301668 | 22291532 | ID=Msa0805610;Name=Msa0805610 |
| chr5_3 | mRNA | 22291532 | 22301668 | 22291532 | ID=Msa0805610-mRNA-1;Parent=Msa0805610;Name=Msa0805610-mRNA-1;_AED=0.28;_eAED=0.28;_QI=340|0.77|0.9|1|0.55|0.5|10|575|267 |
| chr5_3 | exon | 22291532 | 22291848 | 22291532 | ID=Msa0805610-mRNA-1:exon:8962;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22292571 | 22292650 | 22292571 | ID=Msa0805610-mRNA-1:exon:8963;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22296136 | 22296197 | 22296136 | ID=Msa0805610-mRNA-1:exon:8964;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22296405 | 22296545 | 22296405 | ID=Msa0805610-mRNA-1:exon:8965;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22297271 | 22297319 | 22297271 | ID=Msa0805610-mRNA-1:exon:8966;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22297645 | 22297761 | 22297645 | ID=Msa0805610-mRNA-1:exon:8967;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22299702 | 22299808 | 22299702 | ID=Msa0805610-mRNA-1:exon:8968;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22300644 | 22300749 | 22300644 | ID=Msa0805610-mRNA-1:exon:8969;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22300909 | 22301576 | 22300909 | ID=Msa0805610-mRNA-1:exon:8970;Parent=Msa0805610-mRNA-1 |
| chr5_3 | exon | 22301597 | 22301668 | 22301597 | ID=Msa0805610-mRNA-1:exon:8971;Parent=Msa0805610-mRNA-1 |
| chr5_3 | five_prime_UTR | 22291532 | 22291848 | 22291532 | ID=Msa0805610-mRNA-1:five_prime_utr;Parent=Msa0805610-mRNA-1 |
| chr5_3 | five_prime_UTR | 22292571 | 22292593 | 22292571 | ID=Msa0805610-mRNA-1:five_prime_utr;Parent=Msa0805610-mRNA-1 |
| chr5_3 | CDS | 22292594 | 22292650 | 22292594 | ID=Msa0805610-mRNA-1:cds;Parent=Msa0805610-mRNA-1 |
| chr5_3 | CDS | 22296136 | 22296197 | 22296136 | ID=Msa0805610-mRNA-1:cds;Parent=Msa0805610-mRNA-1 |
| chr5_3 | CDS | 22296405 | 22296545 | 22296405 | ID=Msa0805610-mRNA-1:cds;Parent=Msa0805610-mRNA-1 |
| chr5_3 | CDS | 22297271 | 22297319 | 22297271 | ID=Msa0805610-mRNA-1:cds;Parent=Msa0805610-mRNA-1 |
| chr5_3 | CDS | 22297645 | 22297761 | 22297645 | ID=Msa0805610-mRNA-1:cds;Parent=Msa0805610-mRNA-1 |
| chr5_3 | CDS | 22299702 | 22299808 | 22299702 | ID=Msa0805610-mRNA-1:cds;Parent=Msa0805610-mRNA-1 |
| chr5_3 | CDS | 22300644 | 22300749 | 22300644 | ID=Msa0805610-mRNA-1:cds;Parent=Msa0805610-mRNA-1 |
| chr5_3 | CDS | 22300909 | 22301073 | 22300909 | ID=Msa0805610-mRNA-1:cds;Parent=Msa0805610-mRNA-1 |
| chr5_3 | three_prime_UTR | 22301074 | 22301576 | 22301074 | ID=Msa0805610-mRNA-1:three_prime_utr;Parent=Msa0805610-mRNA-1 |
| chr5_3 | three_prime_UTR | 22301597 | 22301668 | 22301597 | ID=Msa0805610-mRNA-1:three_prime_utr;Parent=Msa0805610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
