Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0842980 | XP_003613228.1 | 98.545 | 275 | 4 | 0 | 1 | 275 | 1 | 275 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0842980 | sp|P27141|CAHC_TOBAC | 71.538 | 260 | 73 | 1 | 18 | 276 | 60 | 319 | 5.70e-138 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0842980 | G7K1D4 | 98.545 | 275 | 4 | 0 | 1 | 275 | 1 | 275 | 0.0 | 565 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0763480 | Msa0842980 | 0.892878 | 1.057007e-74 | -8.615850e-47 |
| Msa0805610 | Msa0842980 | 0.882304 | 1.165762e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0842980 | MtrunA17_Chr5g0413551 | 98.419 | 253 | 4 | 0 | 23 | 275 | 1 | 253 | 0.0 | 520 |
| Msa0842980 | MtrunA17_Chr8g0365441 | 81.423 | 253 | 46 | 1 | 23 | 275 | 1 | 252 | 1.28e-155 | 436 |
| Msa0842980 | MtrunA17_Chr6g0450641 | 63.636 | 264 | 90 | 2 | 18 | 276 | 67 | 329 | 2.28e-121 | 352 |
| Msa0842980 | MtrunA17_Chr3g0117661 | 56.327 | 245 | 106 | 1 | 23 | 266 | 1 | 245 | 4.10e-93 | 278 |
| Msa0842980 | MtrunA17_Chr3g0117691 | 54.694 | 245 | 110 | 1 | 23 | 266 | 1 | 245 | 3.01e-91 | 272 |
| Msa0842980 | MtrunA17_Chr2g0279581 | 51.777 | 197 | 92 | 2 | 74 | 270 | 89 | 282 | 9.41e-70 | 219 |
| Msa0842980 | MtrunA17_Chr5g0427341 | 50.254 | 197 | 96 | 2 | 74 | 270 | 94 | 288 | 1.47e-62 | 201 |
| Msa0842980 | MtrunA17_Chr3g0117671 | 72.727 | 44 | 12 | 0 | 105 | 148 | 1 | 44 | 1.27e-16 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0842980 | AT5G14740.9 | 70.196 | 255 | 73 | 1 | 23 | 274 | 1 | 255 | 4.92e-134 | 382 |
| Msa0842980 | AT5G14740.8 | 70.196 | 255 | 73 | 1 | 23 | 274 | 1 | 255 | 4.92e-134 | 382 |
| Msa0842980 | AT5G14740.7 | 70.196 | 255 | 73 | 1 | 23 | 274 | 1 | 255 | 4.92e-134 | 382 |
| Msa0842980 | AT5G14740.2 | 70.196 | 255 | 73 | 1 | 23 | 274 | 1 | 255 | 4.92e-134 | 382 |
| Msa0842980 | AT5G14740.6 | 70.196 | 255 | 73 | 1 | 23 | 274 | 1 | 255 | 4.92e-134 | 382 |
| Msa0842980 | AT5G14740.1 | 67.159 | 271 | 85 | 2 | 8 | 274 | 57 | 327 | 7.33e-133 | 381 |
| Msa0842980 | AT1G70410.2 | 64.516 | 279 | 98 | 1 | 1 | 278 | 1 | 279 | 2.51e-132 | 378 |
| Msa0842980 | AT5G14740.4 | 66.790 | 271 | 85 | 3 | 8 | 274 | 57 | 326 | 2.91e-130 | 375 |
| Msa0842980 | AT5G14740.3 | 66.052 | 271 | 87 | 3 | 8 | 274 | 57 | 326 | 4.67e-129 | 372 |
| Msa0842980 | AT3G01500.1 | 65.649 | 262 | 87 | 1 | 23 | 281 | 1 | 262 | 2.27e-125 | 360 |
| Msa0842980 | AT3G01500.4 | 67.194 | 253 | 80 | 1 | 23 | 272 | 1 | 253 | 2.61e-125 | 359 |
| Msa0842980 | AT1G70410.3 | 66.148 | 257 | 86 | 1 | 23 | 278 | 1 | 257 | 3.74e-125 | 359 |
| Msa0842980 | AT1G70410.1 | 66.148 | 257 | 86 | 1 | 23 | 278 | 1 | 257 | 3.74e-125 | 359 |
| Msa0842980 | AT3G01500.3 | 67.059 | 255 | 81 | 1 | 21 | 272 | 76 | 330 | 4.84e-125 | 362 |
| Msa0842980 | AT3G01500.2 | 65.530 | 264 | 88 | 1 | 21 | 281 | 76 | 339 | 5.17e-125 | 362 |
| Msa0842980 | AT1G23730.2 | 63.529 | 255 | 92 | 1 | 23 | 276 | 1 | 255 | 2.71e-121 | 349 |
| Msa0842980 | AT1G23730.1 | 63.529 | 255 | 92 | 1 | 23 | 276 | 1 | 255 | 2.71e-121 | 349 |
| Msa0842980 | AT5G14740.5 | 68.780 | 205 | 61 | 1 | 23 | 224 | 73 | 277 | 9.75e-101 | 299 |
| Msa0842980 | AT4G33580.3 | 45.339 | 236 | 120 | 5 | 40 | 270 | 48 | 279 | 7.85e-63 | 202 |
| Msa0842980 | AT4G33580.1 | 45.339 | 236 | 120 | 5 | 40 | 270 | 48 | 279 | 7.85e-63 | 202 |
| Msa0842980 | AT4G33580.2 | 45.148 | 237 | 120 | 6 | 40 | 270 | 48 | 280 | 3.17e-62 | 200 |
| Msa0842980 | AT1G58180.2 | 38.956 | 249 | 149 | 2 | 21 | 269 | 28 | 273 | 5.04e-60 | 194 |
| Msa0842980 | AT1G58180.4 | 38.956 | 249 | 149 | 2 | 21 | 269 | 28 | 273 | 5.04e-60 | 194 |
| Msa0842980 | AT1G58180.7 | 41.441 | 222 | 129 | 1 | 48 | 269 | 2 | 222 | 4.71e-59 | 190 |
| Msa0842980 | AT1G58180.3 | 41.441 | 222 | 129 | 1 | 48 | 269 | 2 | 222 | 4.71e-59 | 190 |
| Msa0842980 | AT1G58180.6 | 41.441 | 222 | 129 | 1 | 48 | 269 | 2 | 222 | 4.71e-59 | 190 |
| Msa0842980 | AT1G58180.1 | 40.265 | 226 | 132 | 2 | 21 | 246 | 28 | 250 | 3.76e-55 | 181 |
| Msa0842980 | AT1G58180.5 | 40.196 | 204 | 119 | 2 | 21 | 224 | 28 | 228 | 3.84e-47 | 160 |
Find 134 sgRNAs with CRISPR-Local
Find 645 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTGCTGGATTACATATT+TGG | 0.141121 | 5_4:-20487359 | None:intergenic |
| ACAACCTTTGTCATTTATTT+TGG | 0.143706 | 5_4:+20489534 | Msa0842980:three_prime_UTR |
| GCTAGTTGACAATGAGTTTA+AGG | 0.182452 | 5_4:+20488150 | Msa0842980:CDS |
| AGTATGCCCTTCTCACATTT+TGG | 0.186284 | 5_4:+20484414 | Msa0842980:CDS |
| ATATGCGGTCTTACATTTAA+AGG | 0.214238 | 5_4:+20485378 | Msa0842980:CDS |
| GTGGAGAATATTGTAGTTAT+TGG | 0.233327 | 5_4:+20486385 | Msa0842980:CDS |
| GCCCCAGCCATTTATCTCTT+TGG | 0.249549 | 5_4:-20478295 | None:intergenic |
| TACATTGATGTTCCAAACTA+TGG | 0.251100 | 5_4:+20489633 | Msa0842980:three_prime_UTR |
| CTTGCGGTGGTCCCATCATC+TGG | 0.259227 | 5_4:-20486448 | None:intergenic |
| TTCTTCTTCAACCCTGATAC+TGG | 0.290455 | 5_4:+20488536 | Msa0842980:three_prime_UTR |
| CGCCCCTGCTCCTGAATACT+TGG | 0.295941 | 5_4:-20485347 | None:intergenic |
| CAGAACCCTCTCCTTGTTCA+TGG | 0.300851 | 5_4:-20488438 | None:intergenic |
| GACCTTAGGGCTCTGGCCTT+TGG | 0.303340 | 5_4:-20483268 | None:intergenic |
| GTGGCCAAATTTATAGTTCT+AGG | 0.303544 | 5_4:-20489602 | None:intergenic |
| TTTGCCCCTCTGCATGAAAA+TGG | 0.312676 | 5_4:-20477525 | None:intergenic |
| AATTTAACCTTGGACCTTGC+TGG | 0.313505 | 5_4:-20487372 | None:intergenic |
| TGGTCCTAGAACTATAAATT+TGG | 0.318951 | 5_4:+20489598 | Msa0842980:three_prime_UTR |
| TGACATACTCGTACACATTA+TGG | 0.319199 | 5_4:-20489672 | None:intergenic |
| CATTAATACACTCCATAGTT+TGG | 0.319911 | 5_4:-20489645 | None:intergenic |
| CAGCTGCTGTGGAGGCATAA+AGG | 0.320529 | 5_4:+20486411 | Msa0842980:CDS |
| AAACCATTTGTTCGAGTTGC+CGG | 0.321392 | 5_4:+20488115 | Msa0842980:CDS |
| AGCTGCTGTGGAGGCATAAA+GGG | 0.327110 | 5_4:+20486412 | Msa0842980:CDS |
| AAATGGATACAGAGGGTAAA+AGG | 0.342781 | 5_4:-20487694 | None:intergenic |
| AGGCTACTTTGTGTTGTGTT+AGG | 0.355014 | 5_4:+20489498 | Msa0842980:three_prime_UTR |
| ATTGTAGGTAACACTTTGTT+TGG | 0.355344 | 5_4:+20489395 | Msa0842980:intron |
| TAAAATATGATTGGAGAGAT+TGG | 0.355748 | 5_4:-20477559 | None:intergenic |
| TTTCATTCCCTTGTATGTTT+AGG | 0.369114 | 5_4:+20477476 | Msa0842980:five_prime_UTR |
| GGAGCTGACGGCGGAGTTAG+AGG | 0.369439 | 5_4:+20482202 | Msa0842980:CDS |
| CAGTGATTTCATTGAGCAAT+GGG | 0.388371 | 5_4:+20487335 | Msa0842980:intron |
| CCAACCGGGTGAAGCCTTTG+TGG | 0.395118 | 5_4:+20484441 | Msa0842980:CDS |
| GATCTCGTTACTTCAATTCA+AGG | 0.404125 | 5_4:+20488585 | Msa0842980:three_prime_UTR |
| GGAAGGAAGGATAGTACAAA+TGG | 0.414657 | 5_4:+20489416 | Msa0842980:three_prime_UTR |
| CAATGTAACTAAAATATGAT+TGG | 0.422209 | 5_4:-20477568 | None:intergenic |
| GGGAATGAAAATGAATTTGA+AGG | 0.426102 | 5_4:-20477463 | None:intergenic |
| AAGAGGACCAAAGAGATAAA+TGG | 0.427405 | 5_4:+20478288 | Msa0842980:exon |
| ATGAAGAATGAGAATTTCGT+TGG | 0.432348 | 5_4:-20488496 | None:intergenic |
| GATAATGTTTATGCTACATT+GGG | 0.438170 | 5_4:+20477262 | None:intergenic |
| ATCCTCTCATCCGGGTTAAA+CGG | 0.445021 | 5_4:-20482239 | None:intergenic |
| GAAAAGTAAACCTTGTCATA+TGG | 0.446345 | 5_4:-20484490 | None:intergenic |
| CGAGTTGCCGGAGAATTTCA+AGG | 0.451054 | 5_4:+20488127 | Msa0842980:CDS |
| AGAACCCTCTCCTTGTTCAT+GGG | 0.452052 | 5_4:-20488437 | None:intergenic |
| GAACCATGTTGGCGATGTTA+CGG | 0.461219 | 5_4:-20484465 | None:intergenic |
| ATCTTCTTCACCTTTACTTG+TGG | 0.465958 | 5_4:+20477296 | Msa0842980:five_prime_UTR |
| GTTAAACGGCTTTGAACCGT+TGG | 0.469755 | 5_4:-20482225 | None:intergenic |
| CCGGATCGGATCCTCTCATC+CGG | 0.470107 | 5_4:-20482248 | None:intergenic |
| CTCATGTCTATCCCAGATGA+TGG | 0.470494 | 5_4:+20486436 | Msa0842980:CDS |
| TGTGAGTTAATAGCAGCATT+GGG | 0.470532 | 5_4:-20477395 | None:intergenic |
| GTTGTTTAAAACCAGTGGTA+TGG | 0.470942 | 5_4:+20489578 | Msa0842980:three_prime_UTR |
| GGATAATGTTTATGCTACAT+TGG | 0.472933 | 5_4:+20477261 | None:intergenic |
| TAACACTTTGTTTGGAAGGA+AGG | 0.473219 | 5_4:+20489403 | Msa0842980:three_prime_UTR |
| TATGCAAAGCACACATGAAA+AGG | 0.475075 | 5_4:-20477433 | None:intergenic |
| GCAAGTTCACCGTACAGCTC+AGG | 0.475420 | 5_4:-20483246 | None:intergenic |
| AACTAGCCCTTGAAATTCTC+CGG | 0.475518 | 5_4:-20488134 | None:intergenic |
| TGTTCTTAAGCCACAAGTAA+AGG | 0.476743 | 5_4:-20477306 | None:intergenic |
| AGTCTTGAAACTAACAAAAC+CGG | 0.477828 | 5_4:-20482267 | None:intergenic |
| ACAACACCATCTCTCACAAA+TGG | 0.478188 | 5_4:-20487593 | None:intergenic |
| TCTCCGGCAACTCGAACAAA+TGG | 0.478574 | 5_4:-20488118 | None:intergenic |
| ATGTGAGTTAATAGCAGCAT+TGG | 0.490551 | 5_4:-20477396 | None:intergenic |
| CGGTTCAAAGCCGTTTAACC+CGG | 0.492215 | 5_4:+20482229 | Msa0842980:CDS |
| CAGACCAAGTATTCAGGAGC+AGG | 0.498791 | 5_4:+20485343 | Msa0842980:intron |
| ATGTAAGACCGCATATTCAA+TGG | 0.508542 | 5_4:-20485371 | None:intergenic |
| TTCAGGGAGAAAGCTGAGCT+TGG | 0.509469 | 5_4:+20482155 | Msa0842980:intron |
| AATAGCTGACCTTAGGGCTC+TGG | 0.511436 | 5_4:-20483275 | None:intergenic |
| ACTTGTTTCTAATTTAACCT+TGG | 0.514008 | 5_4:-20487382 | None:intergenic |
| AAGAAAACCCTTGCTTTGAA+AGG | 0.517445 | 5_4:+20487617 | Msa0842980:CDS |
| GACCAAAGAGATAAATGGCT+GGG | 0.523819 | 5_4:+20478293 | Msa0842980:exon |
| CGTCAGCTCCTTGATCTTCA+CGG | 0.527964 | 5_4:-20482189 | None:intergenic |
| TAGTTCTAGGACCATACCAC+TGG | 0.528691 | 5_4:-20489589 | None:intergenic |
| ACAGTGATTTCATTGAGCAA+TGG | 0.531537 | 5_4:+20487334 | Msa0842980:intron |
| GAAGGAAGGATAGTACAAAT+GGG | 0.533415 | 5_4:+20489417 | Msa0842980:three_prime_UTR |
| TGAAGAATGAGAATTTCGTT+GGG | 0.533718 | 5_4:-20488495 | None:intergenic |
| ATGTGCTCCTTTCAAAGCAA+GGG | 0.535168 | 5_4:-20487624 | None:intergenic |
| TAGGTAACACTTTGTTTGGA+AGG | 0.538810 | 5_4:+20489399 | Msa0842980:intron |
| CATCGCCGCCGTGAAGATCA+AGG | 0.541374 | 5_4:+20482181 | Msa0842980:CDS |
| AATGTTTATGCTACATTGGG+AGG | 0.541756 | 5_4:+20477265 | None:intergenic |
| CAAAACCCATGAACAAGGAG+AGG | 0.544608 | 5_4:+20488432 | Msa0842980:CDS |
| TTGCGGTGGTCCCATCATCT+GGG | 0.549867 | 5_4:-20486447 | None:intergenic |
| GCAGTGCACAAACTGTGAAA+AGG | 0.551365 | 5_4:+20487422 | Msa0842980:CDS |
| GGAATGAAAATGAATTTGAA+GGG | 0.555719 | 5_4:-20477462 | None:intergenic |
| ACTTATCCATTTGTGAGAGA+TGG | 0.556933 | 5_4:+20487587 | Msa0842980:CDS |
| GAAGCTGTGAATGTGTCGCT+TGG | 0.559323 | 5_4:+20487554 | Msa0842980:CDS |
| AATGTGCTCCTTTCAAAGCA+AGG | 0.563009 | 5_4:-20487625 | None:intergenic |
| AATCAGAAGGAAGACATGGC+TGG | 0.564330 | 5_4:+20481909 | Msa0842980:intron |
| CCGGATGAGAGGATCCGATC+CGG | 0.568309 | 5_4:+20482248 | Msa0842980:CDS |
| AAGTCTGGTCAGAGTTGCGA+TGG | 0.569242 | 5_4:-20481949 | None:intergenic |
| AAGCTGTGAATGTGTCGCTT+GGG | 0.570904 | 5_4:+20487555 | Msa0842980:CDS |
| TGGAAATCCAAAATGTGAGA+AGG | 0.571528 | 5_4:-20484421 | None:intergenic |
| GGACCAAAGAGATAAATGGC+TGG | 0.573609 | 5_4:+20478292 | Msa0842980:exon |
| GTCATTGCGTACAAGTTACA+AGG | 0.573809 | 5_4:+20489691 | Msa0842980:three_prime_UTR |
| CCACAAAGGCTTCACCCGGT+TGG | 0.578743 | 5_4:-20484441 | None:intergenic |
| CAAGTATTCAGGAGCAGGGG+CGG | 0.582156 | 5_4:+20485348 | Msa0842980:CDS |
| AAACGCAAAACCCATGAACA+AGG | 0.582667 | 5_4:+20488427 | Msa0842980:CDS |
| GGAAATCCAAAATGTGAGAA+GGG | 0.582778 | 5_4:-20484420 | None:intergenic |
| AAATGCAAAGCAGGGTGAAG+AGG | 0.585160 | 5_4:+20478271 | Msa0842980:intron |
| GTAACGAGATCGATGATGTT+GGG | 0.586285 | 5_4:-20488573 | None:intergenic |
| AAATAAAACTTGCCTTGCGG+TGG | 0.586782 | 5_4:-20486461 | None:intergenic |
| TGTGTGTGCCTAAACATACA+AGG | 0.588685 | 5_4:-20477484 | None:intergenic |
| ATTGGACACAGCTGCTGTGG+AGG | 0.590942 | 5_4:+20486403 | Msa0842980:CDS |
| CGGACCACAAAGGCTTCACC+CGG | 0.592537 | 5_4:-20484445 | None:intergenic |
| TGCCAAAGGCCAGAGCCCTA+AGG | 0.593445 | 5_4:+20483266 | Msa0842980:CDS |
| TCATGTCTATCCCAGATGAT+GGG | 0.593762 | 5_4:+20486437 | Msa0842980:CDS |
| GAGTTGCCGGAGAATTTCAA+GGG | 0.595562 | 5_4:+20488128 | Msa0842980:CDS |
| AGGAAGAATCCTGAGCTGTA+CGG | 0.595793 | 5_4:+20483237 | Msa0842980:intron |
| AGACCAAGTATTCAGGAGCA+GGG | 0.597611 | 5_4:+20485344 | Msa0842980:intron |
| AAGTAAACCTTGTCATATGG+TGG | 0.601200 | 5_4:-20484487 | None:intergenic |
| GTTATTGGACACAGCTGCTG+TGG | 0.606630 | 5_4:+20486400 | Msa0842980:CDS |
| AGCCGTTTAACCCGGATGAG+AGG | 0.610912 | 5_4:+20482237 | Msa0842980:CDS |
| CATGGTTCCACCATATGACA+AGG | 0.613750 | 5_4:+20484480 | Msa0842980:CDS |
| CATGGCTGGAGAAACATTCG+AGG | 0.615024 | 5_4:+20481923 | Msa0842980:CDS |
| ATGTAATCCAGCAAGGTCCA+AGG | 0.617068 | 5_4:+20487365 | Msa0842980:CDS |
| CGGATCGGATCCTCTCATCC+GGG | 0.617375 | 5_4:-20482247 | None:intergenic |
| GTCATATGGTGGAACCATGT+TGG | 0.618619 | 5_4:-20484476 | None:intergenic |
| TTGCACAAGCAAGATTGTCT+CGG | 0.626170 | 5_4:+20478342 | Msa0842980:CDS |
| TCCAAATATGTAATCCAGCA+AGG | 0.626631 | 5_4:+20487358 | Msa0842980:CDS |
| GGTCCGTAACATCGCCAACA+TGG | 0.627271 | 5_4:+20484462 | Msa0842980:CDS |
| CAGATGATGGGACCACCGCA+AGG | 0.627584 | 5_4:+20486449 | Msa0842980:CDS |
| ACCAAAGAGATAAATGGCTG+GGG | 0.628077 | 5_4:+20478294 | Msa0842980:exon |
| GACCAAGTATTCAGGAGCAG+GGG | 0.629510 | 5_4:+20485345 | Msa0842980:intron |
| TGAAACTAACAAAACCGGAT+CGG | 0.630831 | 5_4:-20482262 | None:intergenic |
| AGTAACGAGATCGATGATGT+TGG | 0.633047 | 5_4:-20488574 | None:intergenic |
| AGGGGCGGCCATTGAATATG+CGG | 0.637261 | 5_4:+20485363 | Msa0842980:CDS |
| ATGAAATCAGAAGGAAGACA+TGG | 0.641190 | 5_4:+20481905 | Msa0842980:intron |
| AATACCAAAATAAATGACAA+AGG | 0.645496 | 5_4:-20489538 | None:intergenic |
| GAATTGTTGTTTAAAACCAG+TGG | 0.646507 | 5_4:+20489573 | Msa0842980:three_prime_UTR |
| CTGTACGGTGAACTTGCCAA+AGG | 0.647222 | 5_4:+20483252 | Msa0842980:CDS |
| CGTGAAGATCAAGGAGCTGA+CGG | 0.657927 | 5_4:+20482190 | Msa0842980:CDS |
| ACGGCGGAGTTAGAGGCCAA+CGG | 0.658529 | 5_4:+20482209 | Msa0842980:CDS |
| GCTGCTGTGGAGGCATAAAG+GGG | 0.658582 | 5_4:+20486413 | Msa0842980:CDS |
| GGCGATGTTACGGACCACAA+AGG | 0.665172 | 5_4:-20484455 | None:intergenic |
| AAAACCCATGAACAAGGAGA+GGG | 0.665924 | 5_4:+20488433 | Msa0842980:CDS |
| GTGTGTGCCTAAACATACAA+GGG | 0.684916 | 5_4:-20477483 | None:intergenic |
| ACATCAATGTAAATATTGTG+TGG | 0.704837 | 5_4:-20489621 | None:intergenic |
| GAAGATCAAGGAGCTGACGG+CGG | 0.707015 | 5_4:+20482193 | Msa0842980:CDS |
| CAGCTCCTTGATCTTCACGG+CGG | 0.827966 | 5_4:-20482186 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+CGG | - | chr5_4:20479969-20479988 | None:intergenic | 0.0% |
| !! | TATAATAATAATAATAATAT+AGG | - | chr5_4:20485460-20485479 | None:intergenic | 0.0% |
| !! | ATATTATTATTATTATTATA+TGG | + | chr5_4:20485460-20485479 | Msa0842980:intron | 0.0% |
| !! | TAAAAAAAATAATAATAGAG+TGG | - | chr5_4:20479013-20479032 | None:intergenic | 10.0% |
| !!! | CTTTTTGTTTTTATAATTTT+GGG | + | chr5_4:20479417-20479436 | Msa0842980:intron | 10.0% |
| !! | GTGTATATTAATTTAATTAA+TGG | + | chr5_4:20479536-20479555 | Msa0842980:intron | 10.0% |
| !!! | AAAATTAAAAAGCATATATT+GGG | - | chr5_4:20479902-20479921 | None:intergenic | 10.0% |
| !!! | TAAAATTAAAAAGCATATAT+TGG | - | chr5_4:20479903-20479922 | None:intergenic | 10.0% |
| !!! | GCTTTATATTAATTTTTTTT+TGG | - | chr5_4:20480517-20480536 | None:intergenic | 10.0% |
| !!! | TAATCTTTTTTATATATTTG+GGG | - | chr5_4:20480759-20480778 | None:intergenic | 10.0% |
| !!! | TTATTACTATATTATTTTCA+GGG | + | chr5_4:20482139-20482158 | Msa0842980:intron | 10.0% |
| !! | AATATATTTGGTTAAAAAAT+TGG | - | chr5_4:20482889-20482908 | None:intergenic | 10.0% |
| !! | ATAAAAAATTAGAACTAATT+AGG | - | chr5_4:20483356-20483375 | None:intergenic | 10.0% |
| !!! | AACCTTTATTTTATTTTTTT+TGG | + | chr5_4:20483799-20483818 | Msa0842980:intron | 10.0% |
| !! | TAAATATATTACACTATTAA+AGG | - | chr5_4:20484567-20484586 | None:intergenic | 10.0% |
| !! | TTATTATTATTATTATATGG+TGG | + | chr5_4:20485463-20485482 | Msa0842980:intron | 10.0% |
| !! | TATTATTATTATTATATGGT+GGG | + | chr5_4:20485464-20485483 | Msa0842980:intron | 10.0% |
| !!! | CAATATATTTATCTTTTTAT+AGG | + | chr5_4:20485803-20485822 | Msa0842980:intron | 10.0% |
| !! | TATATTCACAATTATATTAA+TGG | - | chr5_4:20486731-20486750 | None:intergenic | 10.0% |
| !!! | TGATTCTTTTTTTTTTATTA+AGG | + | chr5_4:20486959-20486978 | Msa0842980:intron | 10.0% |
| !! | TAAAATATTAAATTACGATT+TGG | - | chr5_4:20487515-20487534 | None:intergenic | 10.0% |
| !! | ATATAAAAATCAGTTAATAT+CGG | - | chr5_4:20488623-20488642 | None:intergenic | 10.0% |
| !!! | CAAAATACTTATTTTATTAG+TGG | + | chr5_4:20477970-20477989 | Msa0842980:intron | 15.0% |
| !! | AATTATTTACATCAAAATGT+TGG | - | chr5_4:20478046-20478065 | None:intergenic | 15.0% |
| !!! | TAAATAGAACCAAATAATTT+TGG | - | chr5_4:20478222-20478241 | None:intergenic | 15.0% |
| !!! | TATCAAGATAATTTTGATAA+TGG | - | chr5_4:20478485-20478504 | None:intergenic | 15.0% |
| !! | TATAAAATCAATAATTGCTA+TGG | + | chr5_4:20478573-20478592 | Msa0842980:intron | 15.0% |
| !! | ATAAAATCAATAATTGCTAT+GGG | + | chr5_4:20478574-20478593 | Msa0842980:intron | 15.0% |
| !!! | AGAAGAATGATTATTTATTT+TGG | - | chr5_4:20479363-20479382 | None:intergenic | 15.0% |
| !! | AAATTATAAAAACAAAAAGG+CGG | - | chr5_4:20479416-20479435 | None:intergenic | 15.0% |
| !! | CCAAAATTATAAAAACAAAA+AGG | - | chr5_4:20479419-20479438 | None:intergenic | 15.0% |
| !!! | CCTTTTTGTTTTTATAATTT+TGG | + | chr5_4:20479416-20479435 | Msa0842980:intron | 15.0% |
| !!! | TGTTTTTGACAAAATAATAT+AGG | - | chr5_4:20479628-20479647 | None:intergenic | 15.0% |
| !! | TTTAAATAATTAACGTAAAG+TGG | + | chr5_4:20480781-20480800 | Msa0842980:intron | 15.0% |
| !!! | ATTAAGCTAGTTATTTTTTT+TGG | + | chr5_4:20480820-20480839 | Msa0842980:intron | 15.0% |
| !! | CATTTAAAAGAAATTGAAAT+TGG | - | chr5_4:20480900-20480919 | None:intergenic | 15.0% |
| !!! | AATGACATGTTAATTTTTTT+AGG | + | chr5_4:20480916-20480935 | Msa0842980:intron | 15.0% |
| !! | ATATCTTCTTTACAAAATAA+AGG | - | chr5_4:20481138-20481157 | None:intergenic | 15.0% |
| !! | ATAATATAGTAATAACGAAA+CGG | - | chr5_4:20482134-20482153 | None:intergenic | 15.0% |
| !!! | GTTATTACTATATTATTTTC+AGG | + | chr5_4:20482138-20482157 | Msa0842980:intron | 15.0% |
| !! | TGAGTTAACAAAAATATATT+TGG | - | chr5_4:20482901-20482920 | None:intergenic | 15.0% |
| !! | ATATTTCTTATAAATAAGAC+CGG | + | chr5_4:20482922-20482941 | Msa0842980:intron | 15.0% |
| !! | ATAGGTATATTATATATCAA+AGG | - | chr5_4:20483458-20483477 | None:intergenic | 15.0% |
| !!! | TAGTAGATATTTTTCATTAT+AGG | - | chr5_4:20483476-20483495 | None:intergenic | 15.0% |
| !! | AAAATAAAATAAAGGTTCAT+AGG | - | chr5_4:20483796-20483815 | None:intergenic | 15.0% |
| !! | GACCAAAAAAAATAAAATAA+AGG | - | chr5_4:20483804-20483823 | None:intergenic | 15.0% |
| !!! | TACTATTTCTTAATGTAATA+AGG | - | chr5_4:20484521-20484540 | None:intergenic | 15.0% |
| !! | TTAATATGAAAACTTTAATG+TGG | - | chr5_4:20484776-20484795 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5_4:20485046-20485065 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5_4:20485047-20485066 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr5_4:20485111-20485130 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr5_4:20485112-20485131 | None:intergenic | 15.0% |
| !! | ATAATATAGGATAAAGTATA+TGG | - | chr5_4:20485447-20485466 | None:intergenic | 15.0% |
| !!! | TATCTTTTTATAGGTTTTTA+TGG | + | chr5_4:20485812-20485831 | Msa0842980:intron | 15.0% |
| !!! | ATCAATTTTATCTTTCAATA+AGG | - | chr5_4:20485854-20485873 | None:intergenic | 15.0% |
| !! | TTCTACTTCTTAAATTTATA+TGG | + | chr5_4:20485902-20485921 | Msa0842980:intron | 15.0% |
| !!! | ATTTATATAAACACATTTTC+AGG | - | chr5_4:20486144-20486163 | None:intergenic | 15.0% |
| !! | TTATTTATTATTATGTTCCT+TGG | + | chr5_4:20486478-20486497 | Msa0842980:intron | 15.0% |
| !!! | CACTAAATTTAAGTTAAATA+GGG | - | chr5_4:20487473-20487492 | None:intergenic | 15.0% |
| !!! | TAAACAATAGATGTTATTTT+TGG | - | chr5_4:20488344-20488363 | None:intergenic | 15.0% |
| !!! | ATATGATTTTGCATTTAAAA+CGG | + | chr5_4:20488639-20488658 | Msa0842980:intron | 15.0% |
| !!! | TTTTTCTTCATCTTATAAAT+CGG | + | chr5_4:20488843-20488862 | Msa0842980:intron | 15.0% |
| !! | AGTAATTAACAATAATTTCA+TGG | - | chr5_4:20489147-20489166 | None:intergenic | 15.0% |
| !! | AAAGTAAAAATAATTACTAG+TGG | - | chr5_4:20489189-20489208 | None:intergenic | 15.0% |
| !! | AATAGTAAATTTGACATAAA+AGG | + | chr5_4:20489356-20489375 | Msa0842980:intron | 15.0% |
| !! | CAATGTAACTAAAATATGAT+TGG | - | chr5_4:20477571-20477590 | None:intergenic | 20.0% |
| !!! | CAATCATATTTTAGTTACAT+TGG | + | chr5_4:20477569-20477588 | Msa0842980:five_prime_UTR | 20.0% |
| !! | GTTTATTAACAAATCGTTTA+AGG | - | chr5_4:20477848-20477867 | None:intergenic | 20.0% |
| !!! | ATGAAAAAAGTATTCATATG+GGG | - | chr5_4:20478091-20478110 | None:intergenic | 20.0% |
| !!! | GATGAAAAAAGTATTCATAT+GGG | - | chr5_4:20478092-20478111 | None:intergenic | 20.0% |
| !!! | AACTTTTCTTATTCTAAAGT+AGG | + | chr5_4:20478134-20478153 | Msa0842980:intron | 20.0% |
| !!! | AAATTGCTATGTATTTTGTT+GGG | - | chr5_4:20478193-20478212 | None:intergenic | 20.0% |
| !! | TTTCCATAACCAAAATTATT+TGG | + | chr5_4:20478210-20478229 | Msa0842980:intron | 20.0% |
| !!! | CATTTGTCGATTAAAAATTT+AGG | - | chr5_4:20478552-20478571 | None:intergenic | 20.0% |
| !! | TACATTATTTCCTATGTAAT+GGG | - | chr5_4:20478984-20479003 | None:intergenic | 20.0% |
| !! | AAAAATAATAATAGAGTGGA+GGG | - | chr5_4:20479009-20479028 | None:intergenic | 20.0% |
| !! | AAAAAATAATAATAGAGTGG+AGG | - | chr5_4:20479010-20479029 | None:intergenic | 20.0% |
| !!! | GATACGTTTTTTTTAAAAGA+TGG | + | chr5_4:20479840-20479859 | Msa0842980:intron | 20.0% |
| !! | CGTCAAAAAAAAAAAATAAC+TGG | - | chr5_4:20480105-20480124 | None:intergenic | 20.0% |
| !! | TTAAGAATTTAGATTGCATA+TGG | - | chr5_4:20480209-20480228 | None:intergenic | 20.0% |
| !!! | TTTTAAATTTTTCGCATGTT+AGG | - | chr5_4:20480275-20480294 | None:intergenic | 20.0% |
| !!! | CAAGATTGTATTAGTTTTAA+GGG | - | chr5_4:20480309-20480328 | None:intergenic | 20.0% |
| !!! | TCAAGATTGTATTAGTTTTA+AGG | - | chr5_4:20480310-20480329 | None:intergenic | 20.0% |
| !!! | CTAAGATAGTCAAAATTTTA+TGG | - | chr5_4:20480399-20480418 | None:intergenic | 20.0% |
| !!! | TTTTTTGTAGTGATTTTAGT+AGG | + | chr5_4:20480467-20480486 | Msa0842980:intron | 20.0% |
| !! | ATTGATTATTGAGTCAAAAA+GGG | - | chr5_4:20480655-20480674 | None:intergenic | 20.0% |
| !!! | TATTGATTATTGAGTCAAAA+AGG | - | chr5_4:20480656-20480675 | None:intergenic | 20.0% |
| !!! | ATTAAGCTAGTTCTTTTTTT+TGG | - | chr5_4:20480861-20480880 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTATGAAATCAGA+AGG | + | chr5_4:20481896-20481915 | Msa0842980:intron | 20.0% |
| !!! | TGTTATTGTTATTTTCATGT+GGG | + | chr5_4:20482078-20482097 | Msa0842980:intron | 20.0% |
| !!! | CAACTGTTAATTTTAATTCA+AGG | - | chr5_4:20482425-20482444 | None:intergenic | 20.0% |
| !!! | TTAAGTTTAAAATTGTGCAT+TGG | - | chr5_4:20482522-20482541 | None:intergenic | 20.0% |
| !! | ATAGTGCAAATATTCTAAAT+AGG | + | chr5_4:20482670-20482689 | Msa0842980:intron | 20.0% |
| !! | TTAATAAATGTTGATGTATC+TGG | + | chr5_4:20482862-20482881 | Msa0842980:intron | 20.0% |
| !! | ATCTTAAATATTACTTCTTC+CGG | - | chr5_4:20482944-20482963 | None:intergenic | 20.0% |
| !!! | ACATAAAAATTTGCTTAACT+TGG | + | chr5_4:20483160-20483179 | Msa0842980:intron | 20.0% |
| !! | TATTTAGAGAACGATAATAA+AGG | - | chr5_4:20483838-20483857 | None:intergenic | 20.0% |
| !! | TTATTATCGTTCTCTAAATA+TGG | + | chr5_4:20483838-20483857 | Msa0842980:intron | 20.0% |
| !! | TTTATCTAAATAATATAGCC+TGG | - | chr5_4:20483918-20483937 | None:intergenic | 20.0% |
| !! | ATTATTGCAATTGTTAATCA+AGG | + | chr5_4:20484022-20484041 | Msa0842980:intron | 20.0% |
| !!! | AGGTAATGTTTTTTTTATCA+AGG | + | chr5_4:20484042-20484061 | Msa0842980:intron | 20.0% |
| !!! | GTTCAATGTTCATATTTTTA+TGG | - | chr5_4:20484087-20484106 | None:intergenic | 20.0% |
| !! | TTGAATTTATTGAATTCACA+TGG | + | chr5_4:20484668-20484687 | Msa0842980:intron | 20.0% |
| !! | TATCAAAGATAAAATGATGT+TGG | - | chr5_4:20484837-20484856 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5_4:20484977-20484996 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr5_4:20485087-20485106 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr5_4:20485110-20485129 | None:intergenic | 20.0% |
| !!! | TCAAAGTTATATCTTCATTT+TGG | + | chr5_4:20485262-20485281 | Msa0842980:intron | 20.0% |
| !! | TAATACTTAACAATGTCAAA+TGG | - | chr5_4:20485525-20485544 | None:intergenic | 20.0% |
| !! | TATTAGATTGCATTATTTGT+TGG | + | chr5_4:20485540-20485559 | Msa0842980:intron | 20.0% |
| !! | ATTAGATTGCATTATTTGTT+GGG | + | chr5_4:20485541-20485560 | Msa0842980:intron | 20.0% |
| !! | TCATATCTTATCGTATATTA+CGG | + | chr5_4:20485584-20485603 | Msa0842980:intron | 20.0% |
| !!! | TCTCTGAAAAAAAGTTTATA+TGG | + | chr5_4:20485928-20485947 | Msa0842980:intron | 20.0% |
| !! | GTCTTATCTACTAAAATATA+AGG | - | chr5_4:20486122-20486141 | None:intergenic | 20.0% |
| !! | ATCGATCATAATAAAATGAA+TGG | - | chr5_4:20486181-20486200 | None:intergenic | 20.0% |
| !!! | AAATTCTTAAGGCTTTAAAT+GGG | - | chr5_4:20486254-20486273 | None:intergenic | 20.0% |
| !! | TCAATTTCTTCAAATTCTTA+AGG | - | chr5_4:20486265-20486284 | None:intergenic | 20.0% |
| !! | ACAAAAAAGTAAAATGCTAT+TGG | - | chr5_4:20486336-20486355 | None:intergenic | 20.0% |
| !!! | GCATTTTACTTTTTTGTTTT+TGG | + | chr5_4:20486339-20486358 | Msa0842980:intron | 20.0% |
| !! | ATTCACAATTATATTAATGG+TGG | - | chr5_4:20486728-20486747 | None:intergenic | 20.0% |
| !!! | TTTTTTCTCTAATTTGTTCT+TGG | - | chr5_4:20486833-20486852 | None:intergenic | 20.0% |
| !!! | ATTTATCTAATGACTAGTTA+GGG | - | chr5_4:20487015-20487034 | None:intergenic | 20.0% |
| !!! | TATTTATCTAATGACTAGTT+AGG | - | chr5_4:20487016-20487035 | None:intergenic | 20.0% |
| !!! | ATGTAACTTTTGCAAAATTA+TGG | + | chr5_4:20487181-20487200 | Msa0842980:intron | 20.0% |
| !!! | AAATTTAAGTTAAATAGGGT+TGG | - | chr5_4:20487469-20487488 | None:intergenic | 20.0% |
| !!! | CCACTAAATTTAAGTTAAAT+AGG | - | chr5_4:20487474-20487493 | None:intergenic | 20.0% |
| !!! | CCTATTTAACTTAAATTTAG+TGG | + | chr5_4:20487471-20487490 | Msa0842980:intron | 20.0% |
| !!! | AATTTCATTTTAAGGATATG+TGG | + | chr5_4:20487934-20487953 | Msa0842980:intron | 20.0% |
| !!! | ATTTCATTTTAAGGATATGT+GGG | + | chr5_4:20487935-20487954 | Msa0842980:intron | 20.0% |
| !!! | AGATATTTTGCATATGAAAT+GGG | + | chr5_4:20488725-20488744 | Msa0842980:intron | 20.0% |
| !!! | ATGGGTTTTTTTTTTTCAAT+TGG | + | chr5_4:20488743-20488762 | Msa0842980:intron | 20.0% |
| !!! | TGGGTTTTTTTTTTTCAATT+GGG | + | chr5_4:20488744-20488763 | Msa0842980:intron | 20.0% |
| !! | AATCGGAATTGAAAATTAAA+TGG | - | chr5_4:20489223-20489242 | None:intergenic | 20.0% |
| !! | CATCAACATATATTTCAAAA+GGG | - | chr5_4:20489274-20489293 | None:intergenic | 20.0% |
| !! | TCATCAACATATATTTCAAA+AGG | - | chr5_4:20489275-20489294 | None:intergenic | 20.0% |
| !!! | TTTGAAATATATGTTGATGA+TGG | + | chr5_4:20489275-20489294 | Msa0842980:intron | 20.0% |
| !!! | TTAATTTTACTGTTCATTGT+AGG | + | chr5_4:20489380-20489399 | Msa0842980:intron | 20.0% |
| !! | AATACCAAAATAAATGACAA+AGG | - | chr5_4:20489541-20489560 | None:intergenic | 20.0% |
| ! | GGAATGAAAATGAATTTGAA+GGG | - | chr5_4:20477465-20477484 | None:intergenic | 25.0% |
| ! | TAAAATATGATTGGAGAGAT+TGG | - | chr5_4:20477562-20477581 | None:intergenic | 25.0% |
| !!! | CTTTACAATTTTCTTGTTTC+TGG | + | chr5_4:20477640-20477659 | Msa0842980:intron | 25.0% |
| ! | ATGTCTTAAGACAATTTGTA+AGG | - | chr5_4:20477943-20477962 | None:intergenic | 25.0% |
| ! | TTTATTAGTGGAAATGAGAA+AGG | + | chr5_4:20477982-20478001 | Msa0842980:intron | 25.0% |
| ! | TACATCAAAATGTTGGAAAA+TGG | - | chr5_4:20478039-20478058 | None:intergenic | 25.0% |
| !!! | TGAAAAAAGTATTCATATGG+GGG | - | chr5_4:20478090-20478109 | None:intergenic | 25.0% |
| !!! | GGATGAAAAAAGTATTCATA+TGG | - | chr5_4:20478093-20478112 | None:intergenic | 25.0% |
| ! | AATTTACTATCAAAAGCAAG+CGG | - | chr5_4:20478114-20478133 | None:intergenic | 25.0% |
| !! | GAAATTGCTATGTATTTTGT+TGG | - | chr5_4:20478194-20478213 | None:intergenic | 25.0% |
| !!! | GAACCAAATAATTTTGGTTA+TGG | - | chr5_4:20478216-20478235 | None:intergenic | 25.0% |
| ! | CAATTCAATGTGTTAACAAT+GGG | - | chr5_4:20478836-20478855 | None:intergenic | 25.0% |
| ! | TCAATTCAATGTGTTAACAA+TGG | - | chr5_4:20478837-20478856 | None:intergenic | 25.0% |
| ! | GATTAACAACTTGAAGATAA+GGG | - | chr5_4:20478935-20478954 | None:intergenic | 25.0% |
| ! | AGATTAACAACTTGAAGATA+AGG | - | chr5_4:20478936-20478955 | None:intergenic | 25.0% |
| ! | GTACATTATTTCCTATGTAA+TGG | - | chr5_4:20478985-20479004 | None:intergenic | 25.0% |
| !!! | TGTTTTTCTCATTTTTGTTG+AGG | + | chr5_4:20479294-20479313 | Msa0842980:intron | 25.0% |
| !! | TGCAGTGTTCATAATTATTT+TGG | + | chr5_4:20479876-20479895 | Msa0842980:intron | 25.0% |
| ! | CAATTTCATTAATGAAAGTC+TGG | + | chr5_4:20480132-20480151 | Msa0842980:intron | 25.0% |
| ! | ATAATTGATCCAACATAGTT+TGG | + | chr5_4:20480330-20480349 | Msa0842980:intron | 25.0% |
| ! | AAATAATCTCCAAACTATGT+TGG | - | chr5_4:20480342-20480361 | None:intergenic | 25.0% |
| ! | GTCAAAAAAAAGAATAACTC+TGG | + | chr5_4:20480608-20480627 | Msa0842980:intron | 25.0% |
| ! | TAATCAATAATTTACTGCCA+TGG | + | chr5_4:20480667-20480686 | Msa0842980:intron | 25.0% |
| ! | AATAATTAACGTAAAGTGGA+AGG | + | chr5_4:20480785-20480804 | Msa0842980:intron | 25.0% |
| !!! | TCTTTTAGTTGTTTAACTTG+TGG | - | chr5_4:20481265-20481284 | None:intergenic | 25.0% |
| !!! | AATATATATGAGTTTTGACG+CGG | - | chr5_4:20481479-20481498 | None:intergenic | 25.0% |
| ! | AACAACAAAATCATGTGATA+CGG | - | chr5_4:20481841-20481860 | None:intergenic | 25.0% |
| !!! | TCAATTTTCATTTGATAACG+CGG | + | chr5_4:20482042-20482061 | Msa0842980:intron | 25.0% |
| !!! | CTGTTATTGTTATTTTCATG+TGG | + | chr5_4:20482077-20482096 | Msa0842980:intron | 25.0% |
| !! | GGATCATGTTTTACTTTATT+TGG | + | chr5_4:20482336-20482355 | Msa0842980:intron | 25.0% |
| !! | TTTATTTGGTTTCGTACTTA+CGG | + | chr5_4:20482350-20482369 | Msa0842980:intron | 25.0% |
| ! | TCATAAGTAACTATTCCAAT+TGG | + | chr5_4:20482391-20482410 | Msa0842980:intron | 25.0% |
| !! | TTCAAGGAATTTTATCCAAT+TGG | - | chr5_4:20482409-20482428 | None:intergenic | 25.0% |
| ! | TGTATTCATGAATTAGTAGT+AGG | - | chr5_4:20482449-20482468 | None:intergenic | 25.0% |
| ! | TCTAAATAGGTCAAGTAATA+TGG | + | chr5_4:20482683-20482702 | Msa0842980:intron | 25.0% |
| ! | CTAAATAGGTCAAGTAATAT+GGG | + | chr5_4:20482684-20482703 | Msa0842980:intron | 25.0% |
| !! | AGTACATTTTACTGAGATAT+TGG | + | chr5_4:20483191-20483210 | Msa0842980:intron | 25.0% |
| ! | AAATAAAGGTTCATAGGAAA+GGG | - | chr5_4:20483790-20483809 | None:intergenic | 25.0% |
| ! | AAAATAAAGGTTCATAGGAA+AGG | - | chr5_4:20483791-20483810 | None:intergenic | 25.0% |
| ! | GAAATCACACATATAGTATA+AGG | + | chr5_4:20484141-20484160 | Msa0842980:intron | 25.0% |
| !! | ATCATTGCTTCTTTGTATTT+TGG | + | chr5_4:20484807-20484826 | Msa0842980:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5_4:20484978-20484997 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr5_4:20484999-20485018 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr5_4:20485000-20485019 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5_4:20485088-20485107 | None:intergenic | 25.0% |
| ! | CATATCTTATCGTATATTAC+GGG | + | chr5_4:20485585-20485604 | Msa0842980:intron | 25.0% |
| ! | TTTAGTTATTGAAATCGAAG+TGG | + | chr5_4:20485674-20485693 | Msa0842980:intron | 25.0% |
| ! | ACACCTCGTATAAAATTAAT+TGG | + | chr5_4:20486228-20486247 | Msa0842980:intron | 25.0% |
| !!! | CAAATTCTTAAGGCTTTAAA+TGG | - | chr5_4:20486255-20486274 | None:intergenic | 25.0% |
| !! | AAAATGCTATTGGAGTTTTA+GGG | - | chr5_4:20486326-20486345 | None:intergenic | 25.0% |
| !! | TAAAATGCTATTGGAGTTTT+AGG | - | chr5_4:20486327-20486346 | None:intergenic | 25.0% |
| ! | AATAAATAAAACTTGCCTTG+CGG | - | chr5_4:20486467-20486486 | None:intergenic | 25.0% |
| ! | TCTTTATAAGAGATATTCCA+AGG | - | chr5_4:20486498-20486517 | None:intergenic | 25.0% |
| ! | TGGAATATCTCTTATAAAGA+AGG | + | chr5_4:20486498-20486517 | Msa0842980:intron | 25.0% |
| ! | ATTTCAACTATGAGATGAAA+GGG | - | chr5_4:20486680-20486699 | None:intergenic | 25.0% |
| !!! | ACCTCTTGAAATTTTTTCTT+TGG | + | chr5_4:20486800-20486819 | Msa0842980:intron | 25.0% |
| !!! | CCTCTTGAAATTTTTTCTTT+GGG | + | chr5_4:20486801-20486820 | Msa0842980:intron | 25.0% |
| !! | TAACTTTTGCAAAATTATGG+TGG | + | chr5_4:20487184-20487203 | Msa0842980:intron | 25.0% |
| !!! | ACTTGTTTCTAATTTAACCT+TGG | - | chr5_4:20487385-20487404 | None:intergenic | 25.0% |
| !! | GCACATTACAATTTTGTTAA+TGG | + | chr5_4:20487641-20487660 | Msa0842980:CDS | 25.0% |
| ! | TTTGGTTGACATTAGTAAAT+GGG | - | chr5_4:20488326-20488345 | None:intergenic | 25.0% |
| !!! | TTTTGGTTGACATTAGTAAA+TGG | - | chr5_4:20488327-20488346 | None:intergenic | 25.0% |
| !! | CAGATATTTTGCATATGAAA+TGG | + | chr5_4:20488724-20488743 | Msa0842980:intron | 25.0% |
| !!! | GATTGTTTTTCACGTATAAT+AGG | - | chr5_4:20489087-20489106 | None:intergenic | 25.0% |
| ! | ATGCATAAAGATGAGAAAAT+CGG | - | chr5_4:20489240-20489259 | None:intergenic | 25.0% |
| !!! | ATGATGGATTTAATATGATC+AGG | + | chr5_4:20489291-20489310 | Msa0842980:intron | 25.0% |
| !!! | TTTTTTGAGTTAGTTTGTGT+TGG | + | chr5_4:20489466-20489485 | Msa0842980:three_prime_UTR | 25.0% |
| !!! | GTTTGTGTTGGTTTTAAAAT+AGG | + | chr5_4:20489478-20489497 | Msa0842980:three_prime_UTR | 25.0% |
| !!! | ACAACCTTTGTCATTTATTT+TGG | + | chr5_4:20489534-20489553 | Msa0842980:three_prime_UTR | 25.0% |
| ! | ACATCAATGTAAATATTGTG+TGG | - | chr5_4:20489624-20489643 | None:intergenic | 25.0% |
| GGGAATGAAAATGAATTTGA+AGG | - | chr5_4:20477466-20477485 | None:intergenic | 30.0% | |
| TTTCATTCCCTTGTATGTTT+AGG | + | chr5_4:20477476-20477495 | Msa0842980:five_prime_UTR | 30.0% | |
| TGTATCAAGCAGTAGATAAT+TGG | - | chr5_4:20477617-20477636 | None:intergenic | 30.0% | |
| !!! | TACAATTTTCTTGTTTCTGG+TGG | + | chr5_4:20477643-20477662 | Msa0842980:intron | 30.0% |
| TAACTAGAGAAAATGCAGTT+TGG | + | chr5_4:20477724-20477743 | Msa0842980:intron | 30.0% | |
| AACTAGAGAAAATGCAGTTT+GGG | + | chr5_4:20477725-20477744 | Msa0842980:intron | 30.0% | |
| TAAACATTAGAGGAGACATT+AGG | - | chr5_4:20477800-20477819 | None:intergenic | 30.0% | |
| TGTCGTCAAATAAACATTAG+AGG | - | chr5_4:20477810-20477829 | None:intergenic | 30.0% | |
| CCATCTTAGCATAAAAAAAG+AGG | - | chr5_4:20478430-20478449 | None:intergenic | 30.0% | |
| !!! | CCTCTTTTTTTATGCTAAGA+TGG | + | chr5_4:20478427-20478446 | Msa0842980:intron | 30.0% |
| AAAAGAAAAATCAAGCCCTA+AGG | - | chr5_4:20478665-20478684 | None:intergenic | 30.0% | |
| AAATATACCTACTCTTGGTA+AGG | - | chr5_4:20478891-20478910 | None:intergenic | 30.0% | |
| AAAAGACATCTTCCAATGTA+AGG | - | chr5_4:20479180-20479199 | None:intergenic | 30.0% | |
| ! | CATTGGAAGATGTCTTTTAT+TGG | + | chr5_4:20479182-20479201 | Msa0842980:intron | 30.0% |
| ! | AGATGTCTTTTATTGGATTG+TGG | + | chr5_4:20479189-20479208 | Msa0842980:intron | 30.0% |
| TAGAAAAACAAAGTGGAATC+TGG | - | chr5_4:20479503-20479522 | None:intergenic | 30.0% | |
| AACTAGCTAGAAAAACAAAG+TGG | - | chr5_4:20479510-20479529 | None:intergenic | 30.0% | |
| ! | TTTTGTCAAAAACACCTCTA+TGG | + | chr5_4:20479634-20479653 | Msa0842980:intron | 30.0% |
| TATATATACGGTCAACAGTT+TGG | - | chr5_4:20479957-20479976 | None:intergenic | 30.0% | |
| TTGCTAAATAATGAGCACAT+TGG | + | chr5_4:20480238-20480257 | Msa0842980:intron | 30.0% | |
| TAAATAATGAGCACATTGGT+TGG | + | chr5_4:20480242-20480261 | Msa0842980:intron | 30.0% | |
| GGTCAAAAGTGATAAATAAC+TGG | - | chr5_4:20480378-20480397 | None:intergenic | 30.0% | |
| ATAATTTACTGCCATGGAAA+AGG | + | chr5_4:20480673-20480692 | Msa0842980:intron | 30.0% | |
| ! | ATATATTTGGGGTCAAATCT+TGG | - | chr5_4:20480748-20480767 | None:intergenic | 30.0% |
| TCTTGCGATGATTTGATATT+TGG | + | chr5_4:20481031-20481050 | Msa0842980:intron | 30.0% | |
| AAAACACACACCAAAAAACA+AGG | + | chr5_4:20481545-20481564 | Msa0842980:intron | 30.0% | |
| !!! | TTTAGACGAACCTTGTTTTT+TGG | - | chr5_4:20481558-20481577 | None:intergenic | 30.0% |
| !! | ATTTGATTTGAATCTGGTGT+TGG | - | chr5_4:20481602-20481621 | None:intergenic | 30.0% |
| !! | AGCATGATTTGATTTGAATC+TGG | - | chr5_4:20481608-20481627 | None:intergenic | 30.0% |
| GATACGGTAACATAAATGAA+CGG | - | chr5_4:20481825-20481844 | None:intergenic | 30.0% | |
| ! | TTTTTCTTACTTGAGAAGTC+TGG | - | chr5_4:20481967-20481986 | None:intergenic | 30.0% |
| ! | TTACATTACACGGTTTGTTT+GGG | - | chr5_4:20482105-20482124 | None:intergenic | 30.0% |
| CAGAGTATGTCAAGTAATAT+GGG | - | chr5_4:20482490-20482509 | None:intergenic | 30.0% | |
| ACAGAGTATGTCAAGTAATA+TGG | - | chr5_4:20482491-20482510 | None:intergenic | 30.0% | |
| ! | ACATTTTACTGAGATATTGG+TGG | + | chr5_4:20483194-20483213 | Msa0842980:intron | 30.0% |
| ! | CATTTTACTGAGATATTGGT+GGG | + | chr5_4:20483195-20483214 | Msa0842980:intron | 30.0% |
| TAATAGAATAGCTGACCTTA+GGG | - | chr5_4:20483284-20483303 | None:intergenic | 30.0% | |
| GCTATTCTATTACTAGTACT+TGG | + | chr5_4:20483292-20483311 | Msa0842980:intron | 30.0% | |
| GTAATTAGTGTAAACGGAAA+TGG | - | chr5_4:20483319-20483338 | None:intergenic | 30.0% | |
| ! | TATTTTATGATCCATGCATC+TGG | + | chr5_4:20483430-20483449 | Msa0842980:intron | 30.0% |
| ! | ATTTTATGATCCATGCATCT+GGG | + | chr5_4:20483431-20483450 | Msa0842980:intron | 30.0% |
| ! | TCGTTCTTTTACACTATGTT+TGG | + | chr5_4:20483555-20483574 | Msa0842980:intron | 30.0% |
| ! | TCTTTTACACTATGTTTGGT+TGG | + | chr5_4:20483559-20483578 | Msa0842980:intron | 30.0% |
| ! | AAGAGAGAACTAAAAAGCAT+GGG | + | chr5_4:20483668-20483687 | Msa0842980:intron | 30.0% |
| TTAGTGGAGAAACAAAAAGT+GGG | - | chr5_4:20483699-20483718 | None:intergenic | 30.0% | |
| TTTAGTGGAGAAACAAAAAG+TGG | - | chr5_4:20483700-20483719 | None:intergenic | 30.0% | |
| CAGAATAGTACTATCCATAA+CGG | - | chr5_4:20484338-20484357 | None:intergenic | 30.0% | |
| GAAAAGTAAACCTTGTCATA+TGG | - | chr5_4:20484493-20484512 | None:intergenic | 30.0% | |
| TTGAATTCACATGGTGTAAA+AGG | + | chr5_4:20484677-20484696 | Msa0842980:intron | 30.0% | |
| ATACAAAGAAGCAATGATGT+TGG | - | chr5_4:20484805-20484824 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5_4:20485103-20485122 | None:intergenic | 30.0% | |
| ATATGCGGTCTTACATTTAA+AGG | + | chr5_4:20485378-20485397 | Msa0842980:CDS | 30.0% | |
| GATAAAGTATATGGTGAAGA+AGG | - | chr5_4:20485438-20485457 | None:intergenic | 30.0% | |
| TGTGGTGCAAAATTTGAAAA+AGG | - | chr5_4:20485732-20485751 | None:intergenic | 30.0% | |
| GTATACTACATTAGATGTTG+TGG | - | chr5_4:20485750-20485769 | None:intergenic | 30.0% | |
| TACTTGTCTCATGTTTGATT+AGG | + | chr5_4:20485975-20485994 | Msa0842980:intron | 30.0% | |
| ! | TTCTAAAAATGATGCCATAC+AGG | + | chr5_4:20486363-20486382 | Msa0842980:intron | 30.0% |
| GTGGAGAATATTGTAGTTAT+TGG | + | chr5_4:20486385-20486404 | Msa0842980:CDS | 30.0% | |
| CATTTCAACTATGAGATGAA+AGG | - | chr5_4:20486681-20486700 | None:intergenic | 30.0% | |
| CCCAAAGAAAAAATTTCAAG+AGG | - | chr5_4:20486804-20486823 | None:intergenic | 30.0% | |
| AGCTTCTACAAAATCAAGAT+AGG | - | chr5_4:20487138-20487157 | None:intergenic | 30.0% | |
| AGCTTATGCTTAGTATTACA+GGG | - | chr5_4:20487232-20487251 | None:intergenic | 30.0% | |
| AAGCTTATGCTTAGTATTAC+AGG | - | chr5_4:20487233-20487252 | None:intergenic | 30.0% | |
| AGCTTAAACTTTCGTAACAT+AGG | + | chr5_4:20487248-20487267 | Msa0842980:intron | 30.0% | |
| TTAAGTTAAATAGGGTTGGA+TGG | - | chr5_4:20487465-20487484 | None:intergenic | 30.0% | |
| TTACTTCCTAATTCAAATGC+AGG | + | chr5_4:20487532-20487551 | Msa0842980:intron | 30.0% | |
| TATATACTGCAAGTTCACTT+TGG | - | chr5_4:20487735-20487754 | None:intergenic | 30.0% | |
| TATCATCAACATTAGTCCTT+TGG | + | chr5_4:20487753-20487772 | Msa0842980:intron | 30.0% | |
| !!! | AGTATTTTGTCGGTTCTAAT+TGG | + | chr5_4:20487779-20487798 | Msa0842980:intron | 30.0% |
| AATGTATGTTTCTTTCTCGA+TGG | - | chr5_4:20487810-20487829 | None:intergenic | 30.0% | |
| GTGAGTAAATATTCTCACAT+TGG | + | chr5_4:20488007-20488026 | Msa0842980:intron | 30.0% | |
| ! | CATAACAATCATGTGTTACT+TGG | - | chr5_4:20488048-20488067 | None:intergenic | 30.0% |
| ! | TTTAAGGTAACGTTTAGCAT+GGG | + | chr5_4:20488166-20488185 | Msa0842980:intron | 30.0% |
| TTGGTTGACATTAGTAAATG+GGG | - | chr5_4:20488325-20488344 | None:intergenic | 30.0% | |
| TGAAGAATGAGAATTTCGTT+GGG | - | chr5_4:20488498-20488517 | None:intergenic | 30.0% | |
| ATGAAGAATGAGAATTTCGT+TGG | - | chr5_4:20488499-20488518 | None:intergenic | 30.0% | |
| !! | TTTGAGTTTTTCCAGTATCA+GGG | - | chr5_4:20488550-20488569 | None:intergenic | 30.0% |
| !!! | TTTTGAGTTTTTCCAGTATC+AGG | - | chr5_4:20488551-20488570 | None:intergenic | 30.0% |
| TGAGCGAATCTTCAAAATAT+CGG | + | chr5_4:20488678-20488697 | Msa0842980:intron | 30.0% | |
| !! | CGTTCAAGATCGTTTATTTT+GGG | - | chr5_4:20488785-20488804 | None:intergenic | 30.0% |
| ! | ACGTTCAAGATCGTTTATTT+TGG | - | chr5_4:20488786-20488805 | None:intergenic | 30.0% |
| AAATAAACGATCTTGAACGT+TGG | + | chr5_4:20488786-20488805 | Msa0842980:intron | 30.0% | |
| ! | TTTTCTATGAAGCCATTTCT+AGG | - | chr5_4:20488941-20488960 | None:intergenic | 30.0% |
| AATGGCTTCATAGAAAAAGT+AGG | + | chr5_4:20488944-20488963 | Msa0842980:intron | 30.0% | |
| ATCTTTGCTGAAATCTTTGA+TGG | + | chr5_4:20489020-20489039 | Msa0842980:intron | 30.0% | |
| TCTTTGCTGAAATCTTTGAT+GGG | + | chr5_4:20489021-20489040 | Msa0842980:intron | 30.0% | |
| AGGACACAAATAGGAAAAAT+TGG | - | chr5_4:20489067-20489086 | None:intergenic | 30.0% | |
| ACGTATAATAGGACACAAAT+AGG | - | chr5_4:20489076-20489095 | None:intergenic | 30.0% | |
| ATTGTAGGTAACACTTTGTT+TGG | + | chr5_4:20489395-20489414 | Msa0842980:intron | 30.0% | |
| !! | GAATTGTTGTTTAAAACCAG+TGG | + | chr5_4:20489573-20489592 | Msa0842980:three_prime_UTR | 30.0% |
| TGGTCCTAGAACTATAAATT+TGG | + | chr5_4:20489598-20489617 | Msa0842980:three_prime_UTR | 30.0% | |
| TACATTGATGTTCCAAACTA+TGG | + | chr5_4:20489633-20489652 | Msa0842980:three_prime_UTR | 30.0% | |
| CATTAATACACTCCATAGTT+TGG | - | chr5_4:20489648-20489667 | None:intergenic | 30.0% | |
| ATCTTCTTCACCTTTACTTG+TGG | + | chr5_4:20477296-20477315 | Msa0842980:five_prime_UTR | 35.0% | |
| TGTTCTTAAGCCACAAGTAA+AGG | - | chr5_4:20477309-20477328 | None:intergenic | 35.0% | |
| TGTGAGTTAATAGCAGCATT+GGG | - | chr5_4:20477398-20477417 | None:intergenic | 35.0% | |
| ATGTGAGTTAATAGCAGCAT+TGG | - | chr5_4:20477399-20477418 | None:intergenic | 35.0% | |
| TATGCAAAGCACACATGAAA+AGG | - | chr5_4:20477436-20477455 | None:intergenic | 35.0% | |
| AAGGAAACACCAACAGTAAA+TGG | + | chr5_4:20478001-20478020 | Msa0842980:intron | 35.0% | |
| AGGAAACACCAACAGTAAAT+GGG | + | chr5_4:20478002-20478021 | Msa0842980:intron | 35.0% | |
| ! | TACATATAAGTTGGACTTGG+AGG | - | chr5_4:20478160-20478179 | None:intergenic | 35.0% |
| ! | AGCTACATATAAGTTGGACT+TGG | - | chr5_4:20478163-20478182 | None:intergenic | 35.0% |
| CAACTTATATGTAGCTCCAA+GGG | + | chr5_4:20478167-20478186 | Msa0842980:intron | 35.0% | |
| ! | TTTTTCTGCAAATGCAAAGC+AGG | + | chr5_4:20478262-20478281 | Msa0842980:intron | 35.0% |
| ! | TTTTCTGCAAATGCAAAGCA+GGG | + | chr5_4:20478263-20478282 | Msa0842980:intron | 35.0% |
| AAGAGGACCAAAGAGATAAA+TGG | + | chr5_4:20478288-20478307 | Msa0842980:exon | 35.0% | |
| CTAAGATGGAGCAAAAGAAA+TGG | + | chr5_4:20478441-20478460 | Msa0842980:intron | 35.0% | |
| TAGCAAGTCTTGAAGATCTT+GGG | - | chr5_4:20478616-20478635 | None:intergenic | 35.0% | |
| TTAGCAAGTCTTGAAGATCT+TGG | - | chr5_4:20478617-20478636 | None:intergenic | 35.0% | |
| !! | AAGATCTTCAAGACTTGCTA+AGG | + | chr5_4:20478616-20478635 | Msa0842980:intron | 35.0% |
| TTGCTAAGGAATGATGCTAT+GGG | + | chr5_4:20478630-20478649 | Msa0842980:intron | 35.0% | |
| TGTGTTAACAATGGGTACTT+TGG | - | chr5_4:20478828-20478847 | None:intergenic | 35.0% | |
| TCACAATACATAGTCCTACA+AGG | + | chr5_4:20478859-20478878 | Msa0842980:intron | 35.0% | |
| GGACAAAATATACCTACTCT+TGG | - | chr5_4:20478896-20478915 | None:intergenic | 35.0% | |
| AAGGGAACACATAAAGCAAT+AGG | - | chr5_4:20478917-20478936 | None:intergenic | 35.0% | |
| ! | TTTCCTATGTAATGGGAAGA+TGG | - | chr5_4:20478977-20478996 | None:intergenic | 35.0% |
| TGATTTCGATTGCCTTACAT+TGG | + | chr5_4:20479165-20479184 | Msa0842980:intron | 35.0% | |
| AAAAACAAAAAGGCGGTGTA+AGG | - | chr5_4:20479409-20479428 | None:intergenic | 35.0% | |
| AAAACAAAGTGGAATCTGGT+GGG | - | chr5_4:20479499-20479518 | None:intergenic | 35.0% | |
| AAAAACAAAGTGGAATCTGG+TGG | - | chr5_4:20479500-20479519 | None:intergenic | 35.0% | |
| ! | ATTCTTAAACACCTGCGTTT+TGG | - | chr5_4:20479661-20479680 | None:intergenic | 35.0% |
| ATTATTGAGTCAAAAAGGGC+AGG | - | chr5_4:20480651-20480670 | None:intergenic | 35.0% | |
| ! | AAGAGATTTCTCCTTTTCCA+TGG | - | chr5_4:20480687-20480706 | None:intergenic | 35.0% |
| CCAACTTACTTACATCACTA+CGG | - | chr5_4:20481174-20481193 | None:intergenic | 35.0% | |
| AACTTACAAACCGTGATAAG+TGG | + | chr5_4:20481410-20481429 | Msa0842980:intron | 35.0% | |
| ! | GTTTTTCTCTTGTGTGATAC+TGG | - | chr5_4:20481530-20481549 | None:intergenic | 35.0% |
| ! | TGATTTGTGACGTGAATTGT+AGG | - | chr5_4:20481643-20481662 | None:intergenic | 35.0% |
| ATGAAATCAGAAGGAAGACA+TGG | + | chr5_4:20481905-20481924 | Msa0842980:intron | 35.0% | |
| AAATTGACGCTAAAAGACAG+CGG | - | chr5_4:20482029-20482048 | None:intergenic | 35.0% | |
| !!! | ATTTTCATTTGATAACGCGG+AGG | + | chr5_4:20482045-20482064 | Msa0842980:intron | 35.0% |
| ! | GTTACATTACACGGTTTGTT+TGG | - | chr5_4:20482106-20482125 | None:intergenic | 35.0% |
| ACGGAAAACGTTACATTACA+CGG | - | chr5_4:20482115-20482134 | None:intergenic | 35.0% | |
| ! | TGATTTTACTGTGCGTGTTT+AGG | + | chr5_4:20482310-20482329 | Msa0842980:intron | 35.0% |
| GTATGTCAAGTAATATGGGA+CGG | - | chr5_4:20482486-20482505 | None:intergenic | 35.0% | |
| ATAGGTCAAGTAATATGGGA+AGG | + | chr5_4:20482688-20482707 | Msa0842980:intron | 35.0% | |
| ! | GAAATTTTCCCCTCAACTTA+CGG | - | chr5_4:20483131-20483150 | None:intergenic | 35.0% |
| GTAATAGAATAGCTGACCTT+AGG | - | chr5_4:20483285-20483304 | None:intergenic | 35.0% | |
| GAACGCGTAATTAGTGTAAA+CGG | - | chr5_4:20483325-20483344 | None:intergenic | 35.0% | |
| TCTCACTAACAGCATTATAG+TGG | + | chr5_4:20483393-20483412 | Msa0842980:intron | 35.0% | |
| GAAGAGAGAACTAAAAAGCA+TGG | + | chr5_4:20483667-20483686 | Msa0842980:intron | 35.0% | |
| TGCAGGAAAAACCAAAAAGA+AGG | - | chr5_4:20483748-20483767 | None:intergenic | 35.0% | |
| ! | CTATTTTATGAAGATCGTCC+AGG | + | chr5_4:20483897-20483916 | Msa0842980:intron | 35.0% |
| GAAAGTGAGAAGAGAGAAAT+AGG | - | chr5_4:20484297-20484316 | None:intergenic | 35.0% | |
| TATAGTGCACATGCAGTTTA+TGG | + | chr5_4:20484369-20484388 | Msa0842980:intron | 35.0% | |
| GGAAATCCAAAATGTGAGAA+GGG | - | chr5_4:20484423-20484442 | None:intergenic | 35.0% | |
| TGGAAATCCAAAATGTGAGA+AGG | - | chr5_4:20484424-20484443 | None:intergenic | 35.0% | |
| ! | TCACATTTTGGATTTCCAAC+CGG | + | chr5_4:20484426-20484445 | Msa0842980:CDS | 35.0% |
| AAGTAAACCTTGTCATATGG+TGG | - | chr5_4:20484490-20484509 | None:intergenic | 35.0% | |
| TGAAGTGACTTCAAACATGT+AGG | - | chr5_4:20484711-20484730 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr5_4:20484964-20484983 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr5_4:20485133-20485152 | Msa0842980:intron | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | + | chr5_4:20485146-20485165 | Msa0842980:intron | 35.0% | |
| CAAAGTAGGTCAATTAAACC+GGG | + | chr5_4:20485147-20485166 | Msa0842980:intron | 35.0% | |
| CTGAATTGAAACACCAAAAC+AGG | - | chr5_4:20485292-20485311 | None:intergenic | 35.0% | |
| ATGTAAGACCGCATATTCAA+TGG | - | chr5_4:20485374-20485393 | None:intergenic | 35.0% | |
| !! | TTATTATATGGTGGGTCTGT+TGG | + | chr5_4:20485472-20485491 | Msa0842980:intron | 35.0% |
| TATGAAAATTGAGATGCGTG+TGG | - | chr5_4:20485569-20485588 | None:intergenic | 35.0% | |
| TATCATCATCGATCATGCTT+AGG | - | chr5_4:20486095-20486114 | None:intergenic | 35.0% | |
| ! | GGGCCAATTAATTTTATACG+AGG | - | chr5_4:20486234-20486253 | None:intergenic | 35.0% |
| TAAAAATGATGCCATACAGG+TGG | + | chr5_4:20486366-20486385 | Msa0842980:intron | 35.0% | |
| TACAATATTCTCCACCTGTA+TGG | - | chr5_4:20486380-20486399 | None:intergenic | 35.0% | |
| ATAACATGATCTATCACCGT+TGG | + | chr5_4:20486761-20486780 | Msa0842980:intron | 35.0% | |
| ! | ATCACCGTTGGTTAATCAAA+AGG | + | chr5_4:20486773-20486792 | Msa0842980:intron | 35.0% |
| !! | CGTTCCTTTTGATTAACCAA+CGG | - | chr5_4:20486780-20486799 | None:intergenic | 35.0% |
| TCTTCATGAACTGAGTTTGT+TGG | + | chr5_4:20487092-20487111 | Msa0842980:intron | 35.0% | |
| GCTTATGCTTAGTATTACAG+GGG | - | chr5_4:20487231-20487250 | None:intergenic | 35.0% | |
| ACAGTGATTTCATTGAGCAA+TGG | + | chr5_4:20487334-20487353 | Msa0842980:intron | 35.0% | |
| CAGTGATTTCATTGAGCAAT+GGG | + | chr5_4:20487335-20487354 | Msa0842980:intron | 35.0% | |
| TCCAAATATGTAATCCAGCA+AGG | + | chr5_4:20487358-20487377 | Msa0842980:CDS | 35.0% | |
| ACCTTGCTGGATTACATATT+TGG | - | chr5_4:20487362-20487381 | None:intergenic | 35.0% | |
| ACTTATCCATTTGTGAGAGA+TGG | + | chr5_4:20487587-20487606 | Msa0842980:CDS | 35.0% | |
| ! | AAGAAAACCCTTGCTTTGAA+AGG | + | chr5_4:20487617-20487636 | Msa0842980:CDS | 35.0% |
| AAATGGATACAGAGGGTAAA+AGG | - | chr5_4:20487697-20487716 | None:intergenic | 35.0% | |
| TTACCCTCTGTATCCATTTA+AGG | + | chr5_4:20487698-20487717 | Msa0842980:intron | 35.0% | |
| AGACCTTAAATGGATACAGA+GGG | - | chr5_4:20487704-20487723 | None:intergenic | 35.0% | |
| !!! | CCTTTGGAAGAGTATTTTGT+CGG | + | chr5_4:20487769-20487788 | Msa0842980:intron | 35.0% |
| TAGCACATAGACCTTTAAGT+TGG | + | chr5_4:20487974-20487993 | Msa0842980:intron | 35.0% | |
| GCTAGTTGACAATGAGTTTA+AGG | + | chr5_4:20488150-20488169 | Msa0842980:CDS | 35.0% | |
| ! | GTTTAAGGTAACGTTTAGCA+TGG | + | chr5_4:20488165-20488184 | Msa0842980:intron | 35.0% |
| ACAACAAGTTATCAACTCAC+AGG | - | chr5_4:20488240-20488259 | None:intergenic | 35.0% | |
| TGGTTGACATTAGTAAATGG+GGG | - | chr5_4:20488324-20488343 | None:intergenic | 35.0% | |
| ATAGAAGAAGAGCTGAATTC+TGG | - | chr5_4:20488400-20488419 | None:intergenic | 35.0% | |
| GATCTCGTTACTTCAATTCA+AGG | + | chr5_4:20488585-20488604 | Msa0842980:three_prime_UTR | 35.0% | |
| CGTTACTTCAATTCAAGGTA+TGG | + | chr5_4:20488590-20488609 | Msa0842980:intron | 35.0% | |
| GAGCGAATCTTCAAAATATC+GGG | + | chr5_4:20488679-20488698 | Msa0842980:intron | 35.0% | |
| AGCGAATCTTCAAAATATCG+GGG | + | chr5_4:20488680-20488699 | Msa0842980:intron | 35.0% | |
| ! | TATCGGGGGTAATTTTTACT+CGG | + | chr5_4:20488695-20488714 | Msa0842980:intron | 35.0% |
| TCCATAGTTATGAACTGTCA+TGG | + | chr5_4:20488907-20488926 | Msa0842980:intron | 35.0% | |
| TCCATGACAGTTCATAACTA+TGG | - | chr5_4:20488911-20488930 | None:intergenic | 35.0% | |
| ! | ATGGATTGCTTACCTAGAAA+TGG | + | chr5_4:20488926-20488945 | Msa0842980:intron | 35.0% |
| TAAGAAACCCAGCTAAACAA+TGG | + | chr5_4:20488969-20488988 | Msa0842980:intron | 35.0% | |
| ACTATCTCCATTGTTTAGCT+GGG | - | chr5_4:20488979-20488998 | None:intergenic | 35.0% | |
| TACTATCTCCATTGTTTAGC+TGG | - | chr5_4:20488980-20488999 | None:intergenic | 35.0% | |
| ! | TAGGTAACACTTTGTTTGGA+AGG | + | chr5_4:20489399-20489418 | Msa0842980:intron | 35.0% |
| ! | TAACACTTTGTTTGGAAGGA+AGG | + | chr5_4:20489403-20489422 | Msa0842980:three_prime_UTR | 35.0% |
| GAAGGAAGGATAGTACAAAT+GGG | + | chr5_4:20489417-20489436 | Msa0842980:three_prime_UTR | 35.0% | |
| ! | GTTGTTTAAAACCAGTGGTA+TGG | + | chr5_4:20489578-20489597 | Msa0842980:three_prime_UTR | 35.0% |
| GTGGCCAAATTTATAGTTCT+AGG | - | chr5_4:20489605-20489624 | None:intergenic | 35.0% | |
| TGACATACTCGTACACATTA+TGG | - | chr5_4:20489675-20489694 | None:intergenic | 35.0% | |
| GTGTGTGCCTAAACATACAA+GGG | - | chr5_4:20477486-20477505 | None:intergenic | 40.0% | |
| TGTGTGTGCCTAAACATACA+AGG | - | chr5_4:20477487-20477506 | None:intergenic | 40.0% | |
| CAAGCAGTAGATAATTGGAG+AGG | - | chr5_4:20477612-20477631 | None:intergenic | 40.0% | |
| !! | CTTGTTTCTGGTGGTAGAAA+TGG | + | chr5_4:20477652-20477671 | Msa0842980:intron | 40.0% |
| GTTGGAAAATGGAAGACAGA+AGG | - | chr5_4:20478028-20478047 | None:intergenic | 40.0% | |
| CCTTGGAGCTACATATAAGT+TGG | - | chr5_4:20478169-20478188 | None:intergenic | 40.0% | |
| CCAACTTATATGTAGCTCCA+AGG | + | chr5_4:20478166-20478185 | Msa0842980:intron | 40.0% | |
| ! | TATGTATTTTGTTGGGCCCT+TGG | - | chr5_4:20478186-20478205 | None:intergenic | 40.0% |
| GACCAAAGAGATAAATGGCT+GGG | + | chr5_4:20478293-20478312 | Msa0842980:exon | 40.0% | |
| ACCAAAGAGATAAATGGCTG+GGG | + | chr5_4:20478294-20478313 | Msa0842980:exon | 40.0% | |
| TTGCACAAGCAAGATTGTCT+CGG | + | chr5_4:20478342-20478361 | Msa0842980:CDS | 40.0% | |
| CAAAAGAAATGGCTTAACGC+AGG | + | chr5_4:20478452-20478471 | Msa0842980:intron | 40.0% | |
| AGCAAGTCTTGAAGATCTTG+GGG | - | chr5_4:20478615-20478634 | None:intergenic | 40.0% | |
| CTTGCTAAGGAATGATGCTA+TGG | + | chr5_4:20478629-20478648 | Msa0842980:intron | 40.0% | |
| ! | CTATGTAATGGGAAGATGGT+GGG | - | chr5_4:20478973-20478992 | None:intergenic | 40.0% |
| ATGTTGTCTCTAACGTTACG+CGG | + | chr5_4:20479220-20479239 | Msa0842980:intron | 40.0% | |
| AGTCACCCAAATAAAAGACG+TGG | - | chr5_4:20479446-20479465 | None:intergenic | 40.0% | |
| AAACAAAGTGGAATCTGGTG+GGG | - | chr5_4:20479498-20479517 | None:intergenic | 40.0% | |
| ! | TTCTTAAACACCCGCGTTTT+TGG | - | chr5_4:20479571-20479590 | None:intergenic | 40.0% |
| ! | GTCTTGTATTTCTGCAGTCT+CGG | - | chr5_4:20480172-20480191 | None:intergenic | 40.0% |
| GAGACTGCAGAAATACAAGA+CGG | + | chr5_4:20480171-20480190 | Msa0842980:intron | 40.0% | |
| CCGTAGTGATGTAAGTAAGT+TGG | + | chr5_4:20481171-20481190 | Msa0842980:intron | 40.0% | |
| GTGTGATACTGGTGAGATTT+GGG | - | chr5_4:20481519-20481538 | None:intergenic | 40.0% | |
| TGTGTGATACTGGTGAGATT+TGG | - | chr5_4:20481520-20481539 | None:intergenic | 40.0% | |
| ! | TCTCTCTCTCTCTCGATTTT+CGG | + | chr5_4:20481992-20482011 | Msa0842980:intron | 40.0% |
| ! | TTACTGTGCGTGTTTAGGAT+CGG | + | chr5_4:20482315-20482334 | Msa0842980:intron | 40.0% |
| GGTTTCGTACTTACGGAATT+AGG | + | chr5_4:20482357-20482376 | Msa0842980:intron | 40.0% | |
| GTCAAGTAATATGGGAAGGA+GGG | + | chr5_4:20482692-20482711 | Msa0842980:intron | 40.0% | |
| TCAGGATTCTTCCTGAAAAG+AGG | - | chr5_4:20483231-20483250 | None:intergenic | 40.0% | |
| AATAGCAAAGTCACCGTGTT+TGG | + | chr5_4:20483628-20483647 | Msa0842980:intron | 40.0% | |
| CTTTCTCTGCAAACCAAACA+CGG | - | chr5_4:20483644-20483663 | None:intergenic | 40.0% | |
| TGGAGAAACAAAAAGTGGGT+GGG | - | chr5_4:20483695-20483714 | None:intergenic | 40.0% | |
| GAAAGGGAAGAATGAACCAA+GGG | - | chr5_4:20483774-20483793 | None:intergenic | 40.0% | |
| ACTATCCATAACGGTGTGTT+TGG | - | chr5_4:20484329-20484348 | None:intergenic | 40.0% | |
| ! | AGTATGCCCTTCTCACATTT+TGG | + | chr5_4:20484414-20484433 | Msa0842980:CDS | 40.0% |
| ! | CACATTTTGGATTTCCAACC+GGG | + | chr5_4:20484427-20484446 | Msa0842980:CDS | 40.0% |
| TGACTTCAAACATGTAGGTG+GGG | - | chr5_4:20484706-20484725 | None:intergenic | 40.0% | |
| GTGACTTCAAACATGTAGGT+GGG | - | chr5_4:20484707-20484726 | None:intergenic | 40.0% | |
| AGTGACTTCAAACATGTAGG+TGG | - | chr5_4:20484708-20484727 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr5_4:20484963-20484982 | None:intergenic | 40.0% | |
| CCGGTTTAATTGACCTACTT+TGG | - | chr5_4:20485149-20485168 | None:intergenic | 40.0% | |
| ! | TCATTTTGGACTGCCTGTTT+TGG | + | chr5_4:20485276-20485295 | Msa0842980:intron | 40.0% |
| ATTCAGACACAAAGTCTGAC+TGG | + | chr5_4:20485306-20485325 | Msa0842980:intron | 40.0% | |
| !!! | TCTGACTGGCCTTTTTGTTT+TGG | + | chr5_4:20485320-20485339 | Msa0842980:intron | 40.0% |
| CTTGGTCTGCCAAAACAAAA+AGG | - | chr5_4:20485332-20485351 | None:intergenic | 40.0% | |
| ! | TTTTGGCAGACCAAGTATTC+AGG | + | chr5_4:20485337-20485356 | Msa0842980:intron | 40.0% |
| AGTATATGGTGAAGAAGGAG+AGG | - | chr5_4:20485433-20485452 | None:intergenic | 40.0% | |
| TCATGTCTATCCCAGATGAT+GGG | + | chr5_4:20486437-20486456 | Msa0842980:CDS | 40.0% | |
| AAATAAAACTTGCCTTGCGG+TGG | - | chr5_4:20486464-20486483 | None:intergenic | 40.0% | |
| CTGTGAATCAGCAACATACT+TGG | - | chr5_4:20486653-20486672 | None:intergenic | 40.0% | |
| ! | TAATGACTAGTTAGGGAGTG+AGG | - | chr5_4:20487008-20487027 | None:intergenic | 40.0% |
| AATTTAACCTTGGACCTTGC+TGG | - | chr5_4:20487375-20487394 | None:intergenic | 40.0% | |
| CAGCTTCCTGCATTTGAATT+AGG | - | chr5_4:20487541-20487560 | None:intergenic | 40.0% | |
| ACAACACCATCTCTCACAAA+TGG | - | chr5_4:20487596-20487615 | None:intergenic | 40.0% | |
| ATGTGCTCCTTTCAAAGCAA+GGG | - | chr5_4:20487627-20487646 | None:intergenic | 40.0% | |
| AATGTGCTCCTTTCAAAGCA+AGG | - | chr5_4:20487628-20487647 | None:intergenic | 40.0% | |
| ! | TTAATGGCACTTTTGAGCTG+TGG | + | chr5_4:20487657-20487676 | Msa0842980:CDS | 40.0% |
| ! | TAATGGCACTTTTGAGCTGT+GGG | + | chr5_4:20487658-20487677 | Msa0842980:CDS | 40.0% |
| GAGACCTTAAATGGATACAG+AGG | - | chr5_4:20487705-20487724 | None:intergenic | 40.0% | |
| CCGACAAAATACTCTTCCAA+AGG | - | chr5_4:20487772-20487791 | None:intergenic | 40.0% | |
| CACTTGACACTCCAACTTAA+AGG | - | chr5_4:20487988-20488007 | None:intergenic | 40.0% | |
| !! | AAACCATTTGTTCGAGTTGC+CGG | + | chr5_4:20488115-20488134 | Msa0842980:CDS | 40.0% |
| AACTAGCCCTTGAAATTCTC+CGG | - | chr5_4:20488137-20488156 | None:intergenic | 40.0% | |
| !!! | TGGATTCTTTTTTCCCACCA+TGG | + | chr5_4:20488191-20488210 | Msa0842980:intron | 40.0% |
| !!! | GGATTCTTTTTTCCCACCAT+GGG | + | chr5_4:20488192-20488211 | Msa0842980:intron | 40.0% |
| ACAAGTTATCAACTCACAGG+TGG | - | chr5_4:20488237-20488256 | None:intergenic | 40.0% | |
| AAACGCAAAACCCATGAACA+AGG | + | chr5_4:20488427-20488446 | Msa0842980:CDS | 40.0% | |
| AAAACCCATGAACAAGGAGA+GGG | + | chr5_4:20488433-20488452 | Msa0842980:CDS | 40.0% | |
| TTCTTCTTCAACCCTGATAC+TGG | + | chr5_4:20488536-20488555 | Msa0842980:three_prime_UTR | 40.0% | |
| GTAACGAGATCGATGATGTT+GGG | - | chr5_4:20488576-20488595 | None:intergenic | 40.0% | |
| AGTAACGAGATCGATGATGT+TGG | - | chr5_4:20488577-20488596 | None:intergenic | 40.0% | |
| GCGAATCTTCAAAATATCGG+GGG | + | chr5_4:20488681-20488700 | Msa0842980:intron | 40.0% | |
| ATCGGCAAATGCTCAAAAAG+AGG | + | chr5_4:20488861-20488880 | Msa0842980:intron | 40.0% | |
| CAAATGCTCAAAAAGAGGCA+TGG | + | chr5_4:20488866-20488885 | Msa0842980:intron | 40.0% | |
| GGAAGGAAGGATAGTACAAA+TGG | + | chr5_4:20489416-20489435 | Msa0842980:three_prime_UTR | 40.0% | |
| ! | AGGCTACTTTGTGTTGTGTT+AGG | + | chr5_4:20489498-20489517 | Msa0842980:three_prime_UTR | 40.0% |
| GTCATTGCGTACAAGTTACA+AGG | + | chr5_4:20489691-20489710 | Msa0842980:three_prime_UTR | 40.0% | |
| ! | TCAGCACCATTTTCATGCAG+AGG | + | chr5_4:20477519-20477538 | Msa0842980:five_prime_UTR | 45.0% |
| ! | CAGCACCATTTTCATGCAGA+GGG | + | chr5_4:20477520-20477539 | Msa0842980:five_prime_UTR | 45.0% |
| ! | AGCACCATTTTCATGCAGAG+GGG | + | chr5_4:20477521-20477540 | Msa0842980:five_prime_UTR | 45.0% |
| TTTGCCCCTCTGCATGAAAA+TGG | - | chr5_4:20477528-20477547 | None:intergenic | 45.0% | |
| GTAGATAATTGGAGAGGTGG+AGG | - | chr5_4:20477606-20477625 | None:intergenic | 45.0% | |
| GCAGTAGATAATTGGAGAGG+TGG | - | chr5_4:20477609-20477628 | None:intergenic | 45.0% | |
| CTGGTGGTAGAAATGGCATT+TGG | + | chr5_4:20477659-20477678 | Msa0842980:intron | 45.0% | |
| ACAGAAGGCCCATTTACTGT+TGG | - | chr5_4:20478013-20478032 | None:intergenic | 45.0% | |
| AAATGCAAAGCAGGGTGAAG+AGG | + | chr5_4:20478271-20478290 | Msa0842980:intron | 45.0% | |
| GGACCAAAGAGATAAATGGC+TGG | + | chr5_4:20478292-20478311 | Msa0842980:exon | 45.0% | |
| AAGAAATGGCTTAACGCAGG+AGG | + | chr5_4:20478455-20478474 | Msa0842980:intron | 45.0% | |
| AGTCTTGAAGATCTTGGGGA+GGG | - | chr5_4:20478611-20478630 | None:intergenic | 45.0% | |
| AAGTCTTGAAGATCTTGGGG+AGG | - | chr5_4:20478612-20478631 | None:intergenic | 45.0% | |
| ! | TATGGGAGCTTGCTTCCTTA+GGG | + | chr5_4:20478647-20478666 | Msa0842980:intron | 45.0% |
| ! | CCTATGTAATGGGAAGATGG+TGG | - | chr5_4:20478974-20478993 | None:intergenic | 45.0% |
| CCACCATCTTCCCATTACAT+AGG | + | chr5_4:20478971-20478990 | Msa0842980:intron | 45.0% | |
| AAAAGGCGGTGTAAGGAATC+AGG | - | chr5_4:20479402-20479421 | None:intergenic | 45.0% | |
| !! | GGCCACCACGTCTTTTATTT+GGG | + | chr5_4:20479438-20479457 | Msa0842980:intron | 45.0% |
| CACCCAAATAAAAGACGTGG+TGG | - | chr5_4:20479443-20479462 | None:intergenic | 45.0% | |
| AACAAAGTGGAATCTGGTGG+GGG | - | chr5_4:20479497-20479516 | None:intergenic | 45.0% | |
| !! | TTAAACACCCGCGTTTTTGG+AGG | - | chr5_4:20479568-20479587 | None:intergenic | 45.0% |
| ! | GCTGTGTATGCCACTTATCA+CGG | - | chr5_4:20481423-20481442 | None:intergenic | 45.0% |
| TTGACGCGGTAGCTATATAG+AGG | - | chr5_4:20481465-20481484 | None:intergenic | 45.0% | |
| AATCAGAAGGAAGACATGGC+TGG | + | chr5_4:20481909-20481928 | Msa0842980:intron | 45.0% | |
| !! | TTCATTTGATAACGCGGAGG+TGG | + | chr5_4:20482048-20482067 | Msa0842980:intron | 45.0% |
| !! | GTTAAACGGCTTTGAACCGT+TGG | - | chr5_4:20482228-20482247 | None:intergenic | 45.0% |
| ATCCTCTCATCCGGGTTAAA+CGG | - | chr5_4:20482242-20482261 | None:intergenic | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | - | chr5_4:20482482-20482501 | None:intergenic | 45.0% | |
| TGTCAAGTAATATGGGACGG+AGG | - | chr5_4:20482483-20482502 | None:intergenic | 45.0% | |
| GGTCAAGTAATATGGGAAGG+AGG | + | chr5_4:20482691-20482710 | Msa0842980:intron | 45.0% | |
| CCTCAACTTACGGCATAGTT+GGG | - | chr5_4:20483121-20483140 | None:intergenic | 45.0% | |
| ! | CCAACTATGCCGTAAGTTGA+GGG | + | chr5_4:20483119-20483138 | Msa0842980:intron | 45.0% |
| ! | CAACTATGCCGTAAGTTGAG+GGG | + | chr5_4:20483120-20483139 | Msa0842980:intron | 45.0% |
| AGGAAGAATCCTGAGCTGTA+CGG | + | chr5_4:20483237-20483256 | Msa0842980:intron | 45.0% | |
| TATCAAAGGTCCCAGATGCA+TGG | - | chr5_4:20483444-20483463 | None:intergenic | 45.0% | |
| GTGGAGAAACAAAAAGTGGG+TGG | - | chr5_4:20483696-20483715 | None:intergenic | 45.0% | |
| ! | GAGAGAAGTGGCCTTCTTTT+TGG | + | chr5_4:20483734-20483753 | Msa0842980:intron | 45.0% |
| ! | GGTTTTTCCTGCAATACCCT+TGG | + | chr5_4:20483755-20483774 | Msa0842980:intron | 45.0% |
| !! | GAATGAACCAAGGGTATTGC+AGG | - | chr5_4:20483765-20483784 | None:intergenic | 45.0% |
| GGAAAGGGAAGAATGAACCA+AGG | - | chr5_4:20483775-20483794 | None:intergenic | 45.0% | |
| CTCAACCAAACACACCGTTA+TGG | + | chr5_4:20484321-20484340 | Msa0842980:intron | 45.0% | |
| GAACCATGTTGGCGATGTTA+CGG | - | chr5_4:20484468-20484487 | None:intergenic | 45.0% | |
| ! | GTCATATGGTGGAACCATGT+TGG | - | chr5_4:20484479-20484498 | None:intergenic | 45.0% |
| CATGGTTCCACCATATGACA+AGG | + | chr5_4:20484480-20484499 | Msa0842980:CDS | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | + | chr5_4:20485151-20485170 | Msa0842980:intron | 45.0% | |
| AGACCAAGTATTCAGGAGCA+GGG | + | chr5_4:20485344-20485363 | Msa0842980:intron | 45.0% | |
| GAAGAAGGAGAGGTAGGATT+AGG | - | chr5_4:20485423-20485442 | None:intergenic | 45.0% | |
| TATGGTGAAGAAGGAGAGGT+AGG | - | chr5_4:20485429-20485448 | None:intergenic | 45.0% | |
| CTCATGTCTATCCCAGATGA+TGG | + | chr5_4:20486436-20486455 | Msa0842980:CDS | 45.0% | |
| CGACAACGTATCATCACTCA+CGG | + | chr5_4:20486907-20486926 | Msa0842980:intron | 45.0% | |
| GACAACGTATCATCACTCAC+GGG | + | chr5_4:20486908-20486927 | Msa0842980:intron | 45.0% | |
| AGTTAGGGAGTGAGGACTTT+GGG | - | chr5_4:20487000-20487019 | None:intergenic | 45.0% | |
| TAGTTAGGGAGTGAGGACTT+TGG | - | chr5_4:20487001-20487020 | None:intergenic | 45.0% | |
| ATGTAATCCAGCAAGGTCCA+AGG | + | chr5_4:20487365-20487384 | Msa0842980:CDS | 45.0% | |
| GCAGTGCACAAACTGTGAAA+AGG | + | chr5_4:20487422-20487441 | Msa0842980:CDS | 45.0% | |
| !! | AAGCTGTGAATGTGTCGCTT+GGG | + | chr5_4:20487555-20487574 | Msa0842980:CDS | 45.0% |
| ! | GGTGTTGGAGAGACCTTAAA+TGG | - | chr5_4:20487714-20487733 | None:intergenic | 45.0% |
| ! | CTGCAAGTTCACTTTGGTGT+TGG | - | chr5_4:20487729-20487748 | None:intergenic | 45.0% |
| GAGTTGCCGGAGAATTTCAA+GGG | + | chr5_4:20488128-20488147 | Msa0842980:CDS | 45.0% | |
| GGTAACGTTTAGCATGGGAA+TGG | + | chr5_4:20488171-20488190 | Msa0842980:intron | 45.0% | |
| AAAGGACACTTTCCCATGGT+GGG | - | chr5_4:20488207-20488226 | None:intergenic | 45.0% | |
| AAAAGGACACTTTCCCATGG+TGG | - | chr5_4:20488208-20488227 | None:intergenic | 45.0% | |
| TATCAACTCACAGGTGGCAT+GGG | - | chr5_4:20488231-20488250 | None:intergenic | 45.0% | |
| TTATCAACTCACAGGTGGCA+TGG | - | chr5_4:20488232-20488251 | None:intergenic | 45.0% | |
| GACATTAGTAAATGGGGGTG+TGG | - | chr5_4:20488319-20488338 | None:intergenic | 45.0% | |
| CAAAACCCATGAACAAGGAG+AGG | + | chr5_4:20488432-20488451 | Msa0842980:CDS | 45.0% | |
| AGAACCCTCTCCTTGTTCAT+GGG | - | chr5_4:20488440-20488459 | None:intergenic | 45.0% | |
| !! | TAGTTCTAGGACCATACCAC+TGG | - | chr5_4:20489592-20489611 | None:intergenic | 45.0% |
| !!! | AATTATTGATTTTTTTTTTT+TGG | - | chr5_4:20478721-20478740 | None:intergenic | 5.0% |
| !!! | ATTTTTTATAATATAGTTTA+TGG | + | chr5_4:20479032-20479051 | Msa0842980:intron | 5.0% |
| !! | TAATTGAAAAATTATTTAAT+TGG | + | chr5_4:20479075-20479094 | Msa0842980:intron | 5.0% |
| !! | TTGATAAAAAAAAATAATAT+AGG | - | chr5_4:20479595-20479614 | None:intergenic | 5.0% |
| !!! | ATTTTTATTTTTATTTTAGT+TGG | + | chr5_4:20480439-20480458 | Msa0842980:intron | 5.0% |
| !!! | CTTTATATTAATTTTTTTTT+GGG | - | chr5_4:20480516-20480535 | None:intergenic | 5.0% |
| !!! | TTAATCTTTTTTATATATTT+GGG | - | chr5_4:20480760-20480779 | None:intergenic | 5.0% |
| !!! | TTTAATCTTTTTTATATATT+TGG | - | chr5_4:20480761-20480780 | None:intergenic | 5.0% |
| !!! | TTTTTTTAAATTTCATTTTA+AGG | + | chr5_4:20487926-20487945 | Msa0842980:intron | 5.0% |
| TGGAGAGGTGGAGGAAAAGA+GGG | - | chr5_4:20477597-20477616 | None:intergenic | 50.0% | |
| TTGGAGAGGTGGAGGAAAAG+AGG | - | chr5_4:20477598-20477617 | None:intergenic | 50.0% | |
| GCCCCAGCCATTTATCTCTT+TGG | - | chr5_4:20478298-20478317 | None:intergenic | 50.0% | |
| AAATGGCTTAACGCAGGAGG+AGG | + | chr5_4:20478458-20478477 | Msa0842980:intron | 50.0% | |
| GTCTTGAAGATCTTGGGGAG+GGG | - | chr5_4:20478610-20478629 | None:intergenic | 50.0% | |
| ! | CTATGGGAGCTTGCTTCCTT+AGG | + | chr5_4:20478646-20478665 | Msa0842980:intron | 50.0% |
| TGGTAAGGCATGTGCCTTGT+AGG | - | chr5_4:20478876-20478895 | None:intergenic | 50.0% | |
| GCACATGCCTTACCAAGAGT+AGG | + | chr5_4:20478881-20478900 | Msa0842980:intron | 50.0% | |
| TCTAACGTTACGCGGTGCAT+AGG | + | chr5_4:20479228-20479247 | Msa0842980:intron | 50.0% | |
| ! | GGGCCACCACGTCTTTTATT+TGG | + | chr5_4:20479437-20479456 | Msa0842980:intron | 50.0% |
| GGTACAAGCCTCCAAAAACG+CGG | + | chr5_4:20479557-20479576 | Msa0842980:intron | 50.0% | |
| GTACAAGCCTCCAAAAACGC+GGG | + | chr5_4:20479558-20479577 | Msa0842980:intron | 50.0% | |
| ACCTCTATGGTCCAAAACGC+AGG | + | chr5_4:20479647-20479666 | Msa0842980:intron | 50.0% | |
| !! | ACCTGCGTTTTGGACCATAG+AGG | - | chr5_4:20479651-20479670 | None:intergenic | 50.0% |
| TGGATCACGACGTGAGACTT+GGG | - | chr5_4:20480728-20480747 | None:intergenic | 50.0% | |
| TTGGATCACGACGTGAGACT+TGG | - | chr5_4:20480729-20480748 | None:intergenic | 50.0% | |
| ACGCGGTAGCTATATAGAGG+AGG | - | chr5_4:20481462-20481481 | None:intergenic | 50.0% | |
| CATGGCTGGAGAAACATTCG+AGG | + | chr5_4:20481923-20481942 | Msa0842980:CDS | 50.0% | |
| AAGTCTGGTCAGAGTTGCGA+TGG | - | chr5_4:20481952-20481971 | None:intergenic | 50.0% | |
| !! | ATTTGATAACGCGGAGGTGG+TGG | + | chr5_4:20482051-20482070 | Msa0842980:intron | 50.0% |
| TTCAGGGAGAAAGCTGAGCT+TGG | + | chr5_4:20482155-20482174 | Msa0842980:intron | 50.0% | |
| CGTCAGCTCCTTGATCTTCA+CGG | - | chr5_4:20482192-20482211 | None:intergenic | 50.0% | |
| CGTGAAGATCAAGGAGCTGA+CGG | + | chr5_4:20482190-20482209 | Msa0842980:CDS | 50.0% | |
| CGGTTCAAAGCCGTTTAACC+CGG | + | chr5_4:20482229-20482248 | Msa0842980:CDS | 50.0% | |
| CCCAACTATGCCGTAAGTTG+AGG | + | chr5_4:20483118-20483137 | Msa0842980:intron | 50.0% | |
| CCCTCAACTTACGGCATAGT+TGG | - | chr5_4:20483122-20483141 | None:intergenic | 50.0% | |
| ! | GTGCTGTACGTCCTCTTTTC+AGG | + | chr5_4:20483217-20483236 | Msa0842980:intron | 50.0% |
| CTGTACGGTGAACTTGCCAA+AGG | + | chr5_4:20483252-20483271 | Msa0842980:CDS | 50.0% | |
| AATAGCTGACCTTAGGGCTC+TGG | - | chr5_4:20483278-20483297 | None:intergenic | 50.0% | |
| !! | CCTCTTTCTCGCTGGTTTAG+TGG | - | chr5_4:20483715-20483734 | None:intergenic | 50.0% |
| CCACTAAACCAGCGAGAAAG+AGG | + | chr5_4:20483712-20483731 | Msa0842980:intron | 50.0% | |
| ACTTCTCTCCTCTTTCTCGC+TGG | - | chr5_4:20483723-20483742 | None:intergenic | 50.0% | |
| AGCGAGAAAGAGGAGAGAAG+TGG | + | chr5_4:20483722-20483741 | Msa0842980:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr5_4:20484959-20484978 | None:intergenic | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | + | chr5_4:20485155-20485174 | Msa0842980:intron | 50.0% | |
| ATTTGATACTCCCTCCGTCC+CGG | - | chr5_4:20485168-20485187 | None:intergenic | 50.0% | |
| CAGACCAAGTATTCAGGAGC+AGG | + | chr5_4:20485343-20485362 | Msa0842980:intron | 50.0% | |
| GACCAAGTATTCAGGAGCAG+GGG | + | chr5_4:20485345-20485364 | Msa0842980:intron | 50.0% | |
| CTGTTGGAGCAGTGGAAGTT+TGG | + | chr5_4:20485488-20485507 | Msa0842980:intron | 50.0% | |
| GAGCAGTGGAAGTTTGGTAG+AGG | + | chr5_4:20485494-20485513 | Msa0842980:intron | 50.0% | |
| GTTATTGGACACAGCTGCTG+TGG | + | chr5_4:20486400-20486419 | Msa0842980:CDS | 50.0% | |
| ! | AGCTGCTGTGGAGGCATAAA+GGG | + | chr5_4:20486412-20486431 | Msa0842980:CDS | 50.0% |
| CGTATCATCACTCACGGGAA+AGG | + | chr5_4:20486913-20486932 | Msa0842980:intron | 50.0% | |
| ! | GAAGCTGTGAATGTGTCGCT+TGG | + | chr5_4:20487554-20487573 | Msa0842980:CDS | 50.0% |
| TCTCCGGCAACTCGAACAAA+TGG | - | chr5_4:20488121-20488140 | None:intergenic | 50.0% | |
| CGAGTTGCCGGAGAATTTCA+AGG | + | chr5_4:20488127-20488146 | Msa0842980:CDS | 50.0% | |
| GGGAAAAGGACACTTTCCCA+TGG | - | chr5_4:20488211-20488230 | None:intergenic | 50.0% | |
| CAGAACCCTCTCCTTGTTCA+TGG | - | chr5_4:20488441-20488460 | None:intergenic | 50.0% | |
| AAGTGGAATCTGGTGGGGGT+GGG | - | chr5_4:20479493-20479512 | None:intergenic | 55.0% | |
| AAAGTGGAATCTGGTGGGGG+TGG | - | chr5_4:20479494-20479513 | None:intergenic | 55.0% | |
| CAGCTCCTTGATCTTCACGG+CGG | - | chr5_4:20482189-20482208 | None:intergenic | 55.0% | |
| GAAGATCAAGGAGCTGACGG+CGG | + | chr5_4:20482193-20482212 | Msa0842980:CDS | 55.0% | |
| AGCCGTTTAACCCGGATGAG+AGG | + | chr5_4:20482237-20482256 | Msa0842980:CDS | 55.0% | |
| GCAAGTTCACCGTACAGCTC+AGG | - | chr5_4:20483249-20483268 | None:intergenic | 55.0% | |
| GGCGATGTTACGGACCACAA+AGG | - | chr5_4:20484458-20484477 | None:intergenic | 55.0% | |
| GGTCCGTAACATCGCCAACA+TGG | + | chr5_4:20484462-20484481 | Msa0842980:CDS | 55.0% | |
| ACTGTATACTCCCTCCGTCC+CGG | + | chr5_4:20484942-20484961 | Msa0842980:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr5_4:20484955-20484974 | None:intergenic | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | + | chr5_4:20485154-20485173 | Msa0842980:intron | 55.0% | |
| CAAGTATTCAGGAGCAGGGG+CGG | + | chr5_4:20485348-20485367 | Msa0842980:CDS | 55.0% | |
| AGGGGCGGCCATTGAATATG+CGG | + | chr5_4:20485363-20485382 | Msa0842980:CDS | 55.0% | |
| ATTGGACACAGCTGCTGTGG+AGG | + | chr5_4:20486403-20486422 | Msa0842980:CDS | 55.0% | |
| ! | CAGCTGCTGTGGAGGCATAA+AGG | + | chr5_4:20486411-20486430 | Msa0842980:CDS | 55.0% |
| ! | GCTGCTGTGGAGGCATAAAG+GGG | + | chr5_4:20486413-20486432 | Msa0842980:CDS | 55.0% |
| TTGCGGTGGTCCCATCATCT+GGG | - | chr5_4:20486450-20486469 | None:intergenic | 55.0% | |
| CTCACAGGTGGCATGGGAAA+AGG | - | chr5_4:20488225-20488244 | None:intergenic | 55.0% | |
| AATCTGGTGGGGGTGGGACT+TGG | - | chr5_4:20479487-20479506 | None:intergenic | 60.0% | |
| GTGGCATACACAGCGCGTTG+TGG | + | chr5_4:20481429-20481448 | Msa0842980:intron | 60.0% | |
| CATCGCCGCCGTGAAGATCA+AGG | + | chr5_4:20482181-20482200 | Msa0842980:CDS | 60.0% | |
| ACGGCGGAGTTAGAGGCCAA+CGG | + | chr5_4:20482209-20482228 | Msa0842980:CDS | 60.0% | |
| CGGATCGGATCCTCTCATCC+GGG | - | chr5_4:20482250-20482269 | None:intergenic | 60.0% | |
| CCGGATCGGATCCTCTCATC+CGG | - | chr5_4:20482251-20482270 | None:intergenic | 60.0% | |
| CCGGATGAGAGGATCCGATC+CGG | + | chr5_4:20482248-20482267 | Msa0842980:CDS | 60.0% | |
| TGCCAAAGGCCAGAGCCCTA+AGG | + | chr5_4:20483266-20483285 | Msa0842980:CDS | 60.0% | |
| ! | GACCTTAGGGCTCTGGCCTT+TGG | - | chr5_4:20483271-20483290 | None:intergenic | 60.0% |
| CCACAAAGGCTTCACCCGGT+TGG | - | chr5_4:20484444-20484463 | None:intergenic | 60.0% | |
| CCAACCGGGTGAAGCCTTTG+TGG | + | chr5_4:20484441-20484460 | Msa0842980:CDS | 60.0% | |
| CGGACCACAAAGGCTTCACC+CGG | - | chr5_4:20484448-20484467 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr5_4:20484956-20484975 | None:intergenic | 60.0% | |
| CGCCCCTGCTCCTGAATACT+TGG | - | chr5_4:20485350-20485369 | None:intergenic | 60.0% | |
| ! | TGGTGGGTCTGTTGGAGCAG+TGG | + | chr5_4:20485480-20485499 | Msa0842980:intron | 60.0% |
| CTTGCGGTGGTCCCATCATC+TGG | - | chr5_4:20486451-20486470 | None:intergenic | 60.0% | |
| !! | CAGATGATGGGACCACCGCA+AGG | + | chr5_4:20486449-20486468 | Msa0842980:CDS | 60.0% |
| GGAGCTGACGGCGGAGTTAG+AGG | + | chr5_4:20482202-20482221 | Msa0842980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 20477274 | 20489729 | 20477274 | ID=Msa0842980;Name=Msa0842980 |
| chr5_4 | mRNA | 20477274 | 20489729 | 20477274 | ID=Msa0842980-mRNA-1;Parent=Msa0842980;Name=Msa0842980-mRNA-1;_AED=0.34;_eAED=0.34;_QI=340|0.91|0.84|1|0.75|0.61|13|459|326 |
| chr5_4 | exon | 20477274 | 20477590 | 20477274 | ID=Msa0842980-mRNA-1:exon:8432;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20478284 | 20478363 | 20478284 | ID=Msa0842980-mRNA-1:exon:8433;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20481915 | 20481976 | 20481915 | ID=Msa0842980-mRNA-1:exon:8434;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20482160 | 20482300 | 20482160 | ID=Msa0842980-mRNA-1:exon:8435;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20483239 | 20483287 | 20483239 | ID=Msa0842980-mRNA-1:exon:8436;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20484385 | 20484501 | 20484385 | ID=Msa0842980-mRNA-1:exon:8437;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20485346 | 20485399 | 20485346 | ID=Msa0842980-mRNA-1:exon:8438;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20486385 | 20486470 | 20486385 | ID=Msa0842980-mRNA-1:exon:8439;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20487338 | 20487443 | 20487338 | ID=Msa0842980-mRNA-1:exon:8440;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20487554 | 20487706 | 20487554 | ID=Msa0842980-mRNA-1:exon:8441;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20488091 | 20488171 | 20488091 | ID=Msa0842980-mRNA-1:exon:8442;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20488401 | 20488606 | 20488401 | ID=Msa0842980-mRNA-1:exon:8443;Parent=Msa0842980-mRNA-1 |
| chr5_4 | exon | 20489402 | 20489729 | 20489402 | ID=Msa0842980-mRNA-1:exon:8444;Parent=Msa0842980-mRNA-1 |
| chr5_4 | five_prime_UTR | 20477274 | 20477590 | 20477274 | ID=Msa0842980-mRNA-1:five_prime_utr;Parent=Msa0842980-mRNA-1 |
| chr5_4 | five_prime_UTR | 20478284 | 20478306 | 20478284 | ID=Msa0842980-mRNA-1:five_prime_utr;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20478307 | 20478363 | 20478307 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20481915 | 20481976 | 20481915 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20482160 | 20482300 | 20482160 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20483239 | 20483287 | 20483239 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20484385 | 20484501 | 20484385 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20485346 | 20485399 | 20485346 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20486385 | 20486470 | 20486385 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20487338 | 20487443 | 20487338 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20487554 | 20487706 | 20487554 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20488091 | 20488171 | 20488091 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | CDS | 20488401 | 20488475 | 20488401 | ID=Msa0842980-mRNA-1:cds;Parent=Msa0842980-mRNA-1 |
| chr5_4 | three_prime_UTR | 20488476 | 20488606 | 20488476 | ID=Msa0842980-mRNA-1:three_prime_utr;Parent=Msa0842980-mRNA-1 |
| chr5_4 | three_prime_UTR | 20489402 | 20489729 | 20489402 | ID=Msa0842980-mRNA-1:three_prime_utr;Parent=Msa0842980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
