Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764290 | sp|O04529|2MMP_ARATH | 54.386 | 285 | 96 | 5 | 50 | 300 | 53 | 337 | 4.30e-99 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764290 | G7K5L1 | 80.056 | 356 | 34 | 5 | 2 | 329 | 22 | 368 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0764290 | Msa1225580 | 0.801472 | 8.859099e-49 | -8.615850e-47 |
| Msa0764290 | Msa1355510 | 0.808805 | 2.585958e-50 | -8.615850e-47 |
| Msa0264680 | Msa0764290 | 0.807012 | 6.223117e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764290 | MtrunA17_Chr5g0414891 | 80.056 | 356 | 34 | 5 | 2 | 329 | 22 | 368 | 0.0 | 545 |
| Msa0764290 | MtrunA17_Chr8g0364281 | 59.603 | 302 | 88 | 4 | 49 | 316 | 91 | 392 | 2.22e-117 | 345 |
| Msa0764290 | MtrunA17_Chr5g0399301 | 41.944 | 360 | 146 | 10 | 8 | 329 | 20 | 354 | 6.35e-82 | 252 |
| Msa0764290 | MtrunA17_Chr8g0334661 | 44.147 | 299 | 125 | 7 | 48 | 313 | 44 | 333 | 8.60e-74 | 231 |
| Msa0764290 | MtrunA17_Chr5g0414641 | 41.636 | 269 | 110 | 11 | 50 | 289 | 71 | 321 | 2.80e-47 | 162 |
| Msa0764290 | MtrunA17_Chr6g0451671 | 32.281 | 285 | 142 | 8 | 49 | 286 | 49 | 329 | 1.07e-37 | 137 |
| Msa0764290 | MtrunA17_Chr5g0414654 | 36.398 | 261 | 116 | 10 | 55 | 291 | 44 | 278 | 5.74e-34 | 127 |
| Msa0764290 | MtrunA17_Chr5g0414657 | 32.131 | 305 | 159 | 9 | 9 | 286 | 29 | 312 | 6.81e-34 | 127 |
| Msa0764290 | MtrunA17_Chr5g0414791 | 32.343 | 303 | 158 | 11 | 53 | 329 | 87 | 368 | 4.31e-30 | 117 |
| Msa0764290 | MtrunA17_Chr5g0414661 | 31.922 | 307 | 146 | 13 | 57 | 329 | 35 | 312 | 3.76e-28 | 111 |
| Msa0764290 | MtrunA17_Chr5g0414821 | 32.308 | 260 | 135 | 8 | 53 | 288 | 112 | 354 | 7.82e-28 | 112 |
| Msa0764290 | MtrunA17_Chr5g0414771 | 32.353 | 272 | 134 | 10 | 55 | 291 | 5 | 261 | 5.89e-27 | 107 |
| Msa0764290 | MtrunA17_Chr3g0134391 | 89.362 | 47 | 5 | 0 | 1 | 47 | 114 | 160 | 1.18e-19 | 84.3 |
| Msa0764290 | MtrunA17_Chr5g0414831 | 37.963 | 108 | 65 | 2 | 170 | 275 | 23 | 130 | 4.19e-12 | 62.8 |
| Msa0764290 | MtrunA17_Chr5g0414801 | 40.000 | 75 | 44 | 1 | 47 | 120 | 65 | 139 | 1.83e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0764290 | AT1G70170.1 | 54.386 | 285 | 96 | 5 | 50 | 300 | 53 | 337 | 4.37e-100 | 300 |
| Msa0764290 | AT1G24140.1 | 52.632 | 285 | 98 | 6 | 50 | 297 | 55 | 339 | 1.04e-94 | 286 |
| Msa0764290 | AT1G59970.1 | 51.379 | 290 | 102 | 7 | 50 | 308 | 54 | 335 | 4.71e-85 | 261 |
| Msa0764290 | AT4G16640.1 | 44.156 | 308 | 127 | 8 | 50 | 327 | 64 | 356 | 7.03e-70 | 222 |
| Msa0764290 | AT2G45040.1 | 45.926 | 270 | 97 | 7 | 56 | 293 | 50 | 302 | 8.57e-68 | 216 |
Find 77 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAATAGGTCATTTATT+AGG | 0.161352 | 5_2:-24023829 | Msa0764290:CDS |
| CAAGGGATTCAGATGCTTTA+TGG | 0.164417 | 5_2:-24023718 | Msa0764290:CDS |
| AGTTCATCAGATATTAAAAT+AGG | 0.204054 | 5_2:-24024033 | Msa0764290:CDS |
| GTAGTTGTCCCAGTAAAATT+AGG | 0.215410 | 5_2:+24023688 | None:intergenic |
| ATGAAATAGGTCATTTATTA+GGG | 0.288245 | 5_2:-24023828 | Msa0764290:CDS |
| AAATTTGACGGTGGCGCGTT+GGG | 0.332941 | 5_2:+24024430 | None:intergenic |
| AAGGGATTCAGATGCTTTAT+GGG | 0.334917 | 5_2:-24023717 | Msa0764290:CDS |
| AGGGATAGAGAATCTAGTTT+TGG | 0.345074 | 5_2:-24023655 | Msa0764290:CDS |
| GTTCATCAGATATTAAAATA+GGG | 0.348740 | 5_2:-24024032 | Msa0764290:CDS |
| ATAGGTCATTTATTAGGGTT+AGG | 0.349255 | 5_2:-24023823 | Msa0764290:CDS |
| TAGGTTAGGGTTTGCTGGCC+GGG | 0.356190 | 5_2:+24024193 | None:intergenic |
| TCTTTGGTGTTTCTTGGGTT+TGG | 0.360778 | 5_2:-24023604 | Msa0764290:CDS |
| TGATTCTAGCGCCGTTGATA+AGG | 0.393096 | 5_2:-24025530 | Msa0764290:CDS |
| TGTTGAGGTTGAAATTCTTC+TGG | 0.399293 | 5_2:+24024368 | None:intergenic |
| TAGTTGTCCCAGTAAAATTA+GGG | 0.403688 | 5_2:+24023689 | None:intergenic |
| TCTGTTGCGGTTCATGAAAT+AGG | 0.406415 | 5_2:-24023841 | Msa0764290:CDS |
| TGGGATCGAAAGCATAGGTT+AGG | 0.412914 | 5_2:+24024179 | None:intergenic |
| AAGCATAGGTTAGGGTTTGC+TGG | 0.423532 | 5_2:+24024188 | None:intergenic |
| TGCTGCTGACTCCGCGAAGA+TGG | 0.439691 | 5_2:-24025458 | Msa0764290:CDS |
| GAAGATGCTTGAAACTGTTA+AGG | 0.440355 | 5_2:-24025566 | None:intergenic |
| ATAGGTTAGGGTTTGCTGGC+CGG | 0.441217 | 5_2:+24024192 | None:intergenic |
| GAAGCATTTGACGGAGTCCT+TGG | 0.447406 | 5_2:-24023982 | Msa0764290:CDS |
| TTTGTTCTTGAACTTATCGT+AGG | 0.452379 | 5_2:+24023769 | None:intergenic |
| AGGTTAGGGTTTGCTGGCCG+GGG | 0.458445 | 5_2:+24024194 | None:intergenic |
| TAGGTCATTTATTAGGGTTA+GGG | 0.476335 | 5_2:-24023822 | Msa0764290:CDS |
| CTTGAGGAGGATGATATTCA+AGG | 0.479588 | 5_2:-24023736 | Msa0764290:CDS |
| GTACATAATAGCCTCTTCAA+TGG | 0.498583 | 5_2:+24023792 | None:intergenic |
| ACTTGGACAAAGCAGAAGAC+TGG | 0.508911 | 5_2:-24023918 | Msa0764290:CDS |
| GAAATTTGACGGTGGCGCGT+TGG | 0.509602 | 5_2:+24024429 | None:intergenic |
| GAGGTTGAAATTCTTCTGGT+AGG | 0.523649 | 5_2:+24024372 | None:intergenic |
| TTGTTCTTGAACTTATCGTA+GGG | 0.525939 | 5_2:+24023770 | None:intergenic |
| GGACAACTACTGCTACTTCG+AGG | 0.530572 | 5_2:-24023675 | Msa0764290:CDS |
| GCACACTATTCATTCTTCCC+CGG | 0.533542 | 5_2:-24024211 | Msa0764290:CDS |
| GGGATCGAAAGCATAGGTTA+GGG | 0.543118 | 5_2:+24024180 | None:intergenic |
| GAAGGAGGATCATCAGTAGT+TGG | 0.543978 | 5_2:+24025490 | None:intergenic |
| GCAGAAGACTGGGTAGTTAG+CGG | 0.544338 | 5_2:-24023907 | Msa0764290:CDS |
| AAGTCATCAGTGAAATTTGA+CGG | 0.545126 | 5_2:+24024418 | None:intergenic |
| AATTTGACGGTGGCGCGTTG+GGG | 0.555953 | 5_2:+24024431 | None:intergenic |
| AACGTTTCGTTGCGTCGTCG+AGG | 0.556191 | 5_2:+24024149 | None:intergenic |
| TGCAACAGTGTGGAAGTTTG+TGG | 0.558255 | 5_2:+24024231 | None:intergenic |
| AACTGATGGAAGGTTACACT+TGG | 0.558584 | 5_2:-24023935 | Msa0764290:CDS |
| AGGGCATTCTTCCATTGAAG+AGG | 0.560714 | 5_2:-24023803 | Msa0764290:CDS |
| AGTCTCCGTCTCCATCTTCG+CGG | 0.566645 | 5_2:+24025447 | None:intergenic |
| GGCGACGGAGAAGCATTTGA+CGG | 0.569294 | 5_2:-24023991 | Msa0764290:CDS |
| TACAGTGGGGACCATGGCGA+CGG | 0.572091 | 5_2:-24024006 | Msa0764290:CDS |
| AGCAGCAGCATCCTTATCAA+CGG | 0.573033 | 5_2:+24025519 | None:intergenic |
| TTGAGGAGGATGATATTCAA+GGG | 0.580266 | 5_2:-24023735 | Msa0764290:CDS |
| GGTAGTTAGCGGAGATGTAA+CGG | 0.582074 | 5_2:-24023896 | Msa0764290:CDS |
| GGCACAACCTCCATGAACTC+CGG | 0.583719 | 5_2:-24024271 | Msa0764290:CDS |
| TCAGCAGCATCCTCTGCAGA+AGG | 0.583953 | 5_2:+24025472 | None:intergenic |
| CTTGGACAAAGCAGAAGACT+GGG | 0.588598 | 5_2:-24023917 | Msa0764290:CDS |
| CAAATGCTTCTCCGTCGCCA+TGG | 0.589334 | 5_2:+24023995 | None:intergenic |
| TGACTTCGACGAGGCTTCCG+CGG | 0.590549 | 5_2:-24024401 | Msa0764290:CDS |
| AATTTCAACCTCAACATCAC+AGG | 0.593549 | 5_2:-24024361 | Msa0764290:CDS |
| TGATAAGGATGCTGCTGCTG+TGG | 0.594726 | 5_2:-24025515 | Msa0764290:CDS |
| AAGTGTAACCTTCCATCAGT+TGG | 0.595259 | 5_2:+24023937 | None:intergenic |
| TGACTCCGCGAAGATGGAGA+CGG | 0.595843 | 5_2:-24025452 | Msa0764290:CDS |
| GACAACTACTGCTACTTCGA+GGG | 0.599729 | 5_2:-24023674 | Msa0764290:CDS |
| AACAAAGAAAGTTGAACTTG+AGG | 0.601323 | 5_2:-24023752 | Msa0764290:CDS |
| ATCAACGGCGCTAGAATCAA+CGG | 0.603734 | 5_2:+24025534 | None:intergenic |
| AAAGAAAGTTGAACTTGAGG+AGG | 0.606210 | 5_2:-24023749 | Msa0764290:CDS |
| TACATCGTCAAGCCACGTTG+CGG | 0.606730 | 5_2:-24024313 | Msa0764290:CDS |
| AAGCGTGTGCTAATGTTCCA+AGG | 0.614495 | 5_2:+24023965 | None:intergenic |
| TGTTGACTTAGAATCTGTTG+CGG | 0.625824 | 5_2:-24023854 | Msa0764290:CDS |
| TTCGCTGGGATCGAAAGCAT+AGG | 0.636695 | 5_2:+24024174 | None:intergenic |
| GCAGCATCCTCTGCAGAAGG+AGG | 0.642199 | 5_2:+24025475 | None:intergenic |
| CGTTGGGGATGTAACCGAAG+TGG | 0.642549 | 5_2:+24024446 | None:intergenic |
| CGAGTTCACCTGTGATGTTG+AGG | 0.650318 | 5_2:+24024353 | None:intergenic |
| TGATGATCCTCCTTCTGCAG+AGG | 0.652623 | 5_2:-24025482 | Msa0764290:CDS |
| GGTGTGGCTGACATCATCAA+CGG | 0.683272 | 5_2:-24024292 | Msa0764290:CDS |
| ACGGCGCTAGAATCAACGGT+AGG | 0.692601 | 5_2:+24025538 | None:intergenic |
| ATGAATAGTGTGCAACAGTG+TGG | 0.693351 | 5_2:+24024221 | None:intergenic |
| AGCCGCGGCAAAACTTACGA+CGG | 0.712007 | 5_2:-24024496 | Msa0764290:CDS |
| CTTCTGGTAGGTTCGCACCG+CGG | 0.717943 | 5_2:+24024384 | None:intergenic |
| TTTCACTGATGACTTCGACG+AGG | 0.730992 | 5_2:-24024410 | Msa0764290:CDS |
| TCATCAGTGAAATTTGACGG+TGG | 0.734770 | 5_2:+24024421 | None:intergenic |
| ATGTCAGCCACACCGCAACG+TGG | 0.756860 | 5_2:+24024301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAATAAAAAAAAAAAAAG+AGG | - | chr5_2:24024063-24024082 | Msa0764290:intron | 10.0% |
| !! | GTAAATAAAAAAAAAAAAAG+AGG | - | chr5_2:24024063-24024082 | Msa0764290:intron | 10.0% |
| !!! | TTTTTTTATGTGAGAATAAT+AGG | + | chr5_2:24024031-24024050 | None:intergenic | 15.0% |
| !! | ATAATATATAGTTCAATGTA+TGG | + | chr5_2:24024165-24024184 | None:intergenic | 15.0% |
| !! | GAAGATATATATAATATGAT+AGG | + | chr5_2:24024394-24024413 | None:intergenic | 15.0% |
| !!! | TTTTTTTATGTGAGAATAAT+AGG | + | chr5_2:24024031-24024050 | None:intergenic | 15.0% |
| !! | ATAATATATAGTTCAATGTA+TGG | + | chr5_2:24024165-24024184 | None:intergenic | 15.0% |
| !! | GAAGATATATATAATATGAT+AGG | + | chr5_2:24024394-24024413 | None:intergenic | 15.0% |
| !! | TCTAAAAAAAATCTGTTTGA+TGG | + | chr5_2:24023830-24023849 | None:intergenic | 20.0% |
| !! | TAGATCAGAATTAAATGATT+GGG | + | chr5_2:24023992-24024011 | None:intergenic | 20.0% |
| !! | TTAGATCAGAATTAAATGAT+TGG | + | chr5_2:24023993-24024012 | None:intergenic | 20.0% |
| !! | AATCATTTAATTCTGATCTA+AGG | - | chr5_2:24023992-24024011 | Msa0764290:CDS | 20.0% |
| !!! | TTATGTTTTTTGATAGTGAT+GGG | + | chr5_2:24024305-24024324 | None:intergenic | 20.0% |
| !!! | ATTATGTTTTTTGATAGTGA+TGG | + | chr5_2:24024306-24024325 | None:intergenic | 20.0% |
| !!! | TTGTTATGGAGAAATTTTAA+TGG | + | chr5_2:24024457-24024476 | None:intergenic | 20.0% |
| !! | ATATGTGATAATAATAACGT+TGG | + | chr5_2:24024497-24024516 | None:intergenic | 20.0% |
| !! | AGTTCATCAGATATTAAAAT+AGG | - | chr5_2:24025117-24025136 | Msa0764290:intron | 20.0% |
| !! | GTTCATCAGATATTAAAATA+GGG | - | chr5_2:24025118-24025137 | Msa0764290:intron | 20.0% |
| !! | ATGAAATAGGTCATTTATTA+GGG | - | chr5_2:24025322-24025341 | Msa0764290:intron | 20.0% |
| !! | TCTAAAAAAAATCTGTTTGA+TGG | + | chr5_2:24023830-24023849 | None:intergenic | 20.0% |
| !! | TAGATCAGAATTAAATGATT+GGG | + | chr5_2:24023992-24024011 | None:intergenic | 20.0% |
| !! | TTAGATCAGAATTAAATGAT+TGG | + | chr5_2:24023993-24024012 | None:intergenic | 20.0% |
| !! | AATCATTTAATTCTGATCTA+AGG | - | chr5_2:24023992-24024011 | Msa0764290:CDS | 20.0% |
| !!! | TTATGTTTTTTGATAGTGAT+GGG | + | chr5_2:24024305-24024324 | None:intergenic | 20.0% |
| !!! | ATTATGTTTTTTGATAGTGA+TGG | + | chr5_2:24024306-24024325 | None:intergenic | 20.0% |
| !!! | TTGTTATGGAGAAATTTTAA+TGG | + | chr5_2:24024457-24024476 | None:intergenic | 20.0% |
| !! | ATATGTGATAATAATAACGT+TGG | + | chr5_2:24024497-24024516 | None:intergenic | 20.0% |
| !! | AGTTCATCAGATATTAAAAT+AGG | - | chr5_2:24025117-24025136 | Msa0764290:intron | 20.0% |
| !! | GTTCATCAGATATTAAAATA+GGG | - | chr5_2:24025118-24025137 | Msa0764290:intron | 20.0% |
| !! | ATGAAATAGGTCATTTATTA+GGG | - | chr5_2:24025322-24025341 | Msa0764290:intron | 20.0% |
| ! | AAAAAAAATCTGTTTGATGG+AGG | + | chr5_2:24023827-24023846 | None:intergenic | 25.0% |
| !! | GTATGGACTAATTTAAATAC+CGG | + | chr5_2:24024148-24024167 | None:intergenic | 25.0% |
| ! | AATATGATAGGTTGTGTTAT+AGG | + | chr5_2:24024382-24024401 | None:intergenic | 25.0% |
| !!! | TGAGTAATCATGTTTTGTTA+TGG | + | chr5_2:24024471-24024490 | None:intergenic | 25.0% |
| !! | ATTAAAATAGGGTTTTACAG+TGG | - | chr5_2:24025129-24025148 | Msa0764290:intron | 25.0% |
| !! | TTAAAATAGGGTTTTACAGT+GGG | - | chr5_2:24025130-24025149 | Msa0764290:intron | 25.0% |
| ! | CATGAAATAGGTCATTTATT+AGG | - | chr5_2:24025321-24025340 | Msa0764290:intron | 25.0% |
| ! | AAAAAAAATCTGTTTGATGG+AGG | + | chr5_2:24023827-24023846 | None:intergenic | 25.0% |
| !! | GTATGGACTAATTTAAATAC+CGG | + | chr5_2:24024148-24024167 | None:intergenic | 25.0% |
| ! | AATATGATAGGTTGTGTTAT+AGG | + | chr5_2:24024382-24024401 | None:intergenic | 25.0% |
| !!! | TGAGTAATCATGTTTTGTTA+TGG | + | chr5_2:24024471-24024490 | None:intergenic | 25.0% |
| !! | ATTAAAATAGGGTTTTACAG+TGG | - | chr5_2:24025129-24025148 | Msa0764290:intron | 25.0% |
| !! | TTAAAATAGGGTTTTACAGT+GGG | - | chr5_2:24025130-24025149 | Msa0764290:intron | 25.0% |
| ! | CATGAAATAGGTCATTTATT+AGG | - | chr5_2:24025321-24025340 | Msa0764290:intron | 25.0% |
| GATGAACAATCCATATAAAC+AGG | - | chr5_2:24023919-24023938 | Msa0764290:CDS | 30.0% | |
| AAAAAAAAAGAGGTCTCCTA+CGG | - | chr5_2:24024073-24024092 | Msa0764290:intron | 30.0% | |
| ! | ATATTTGTTTGTTGAGGACA+TGG | + | chr5_2:24024201-24024220 | None:intergenic | 30.0% |
| ! | ACTTCGATATTTGTTTGTTG+AGG | + | chr5_2:24024207-24024226 | None:intergenic | 30.0% |
| ACAAATATCGAAGTTTCCAA+TGG | - | chr5_2:24024213-24024232 | Msa0764290:CDS | 30.0% | |
| !!! | GTTTTAGAAATCAAGTGTGA+TGG | + | chr5_2:24024429-24024448 | None:intergenic | 30.0% |
| AAAAACTACTTCAACCACTT+CGG | - | chr5_2:24024690-24024709 | Msa0764290:intron | 30.0% | |
| AAGTCATCAGTGAAATTTGA+CGG | + | chr5_2:24024735-24024754 | None:intergenic | 30.0% | |
| AAGTAAACGCGTTTAATCAA+TGG | - | chr5_2:24025052-24025071 | Msa0764290:intron | 30.0% | |
| ! | TAAAATAGGGTTTTACAGTG+GGG | - | chr5_2:24025131-24025150 | Msa0764290:intron | 30.0% |
| ATAGGTCATTTATTAGGGTT+AGG | - | chr5_2:24025327-24025346 | Msa0764290:intron | 30.0% | |
| TAGGTCATTTATTAGGGTTA+GGG | - | chr5_2:24025328-24025347 | Msa0764290:intron | 30.0% | |
| TTGTTCTTGAACTTATCGTA+GGG | + | chr5_2:24025383-24025402 | None:intergenic | 30.0% | |
| TTTGTTCTTGAACTTATCGT+AGG | + | chr5_2:24025384-24025403 | None:intergenic | 30.0% | |
| AACAAAGAAAGTTGAACTTG+AGG | - | chr5_2:24025398-24025417 | Msa0764290:intron | 30.0% | |
| TAGTTGTCCCAGTAAAATTA+GGG | + | chr5_2:24025464-24025483 | None:intergenic | 30.0% | |
| !!! | TTTTTGTCTTTGGTGTTTCT+TGG | - | chr5_2:24025540-24025559 | Msa0764290:CDS | 30.0% |
| !!! | TTTTGTCTTTGGTGTTTCTT+GGG | - | chr5_2:24025541-24025560 | Msa0764290:CDS | 30.0% |
| GATGAACAATCCATATAAAC+AGG | - | chr5_2:24023919-24023938 | Msa0764290:CDS | 30.0% | |
| AAAAAAAAAGAGGTCTCCTA+CGG | - | chr5_2:24024073-24024092 | Msa0764290:intron | 30.0% | |
| ! | ATATTTGTTTGTTGAGGACA+TGG | + | chr5_2:24024201-24024220 | None:intergenic | 30.0% |
| ! | ACTTCGATATTTGTTTGTTG+AGG | + | chr5_2:24024207-24024226 | None:intergenic | 30.0% |
| ACAAATATCGAAGTTTCCAA+TGG | - | chr5_2:24024213-24024232 | Msa0764290:CDS | 30.0% | |
| !!! | GTTTTAGAAATCAAGTGTGA+TGG | + | chr5_2:24024429-24024448 | None:intergenic | 30.0% |
| AAAAACTACTTCAACCACTT+CGG | - | chr5_2:24024690-24024709 | Msa0764290:intron | 30.0% | |
| AAGTCATCAGTGAAATTTGA+CGG | + | chr5_2:24024735-24024754 | None:intergenic | 30.0% | |
| AAGTAAACGCGTTTAATCAA+TGG | - | chr5_2:24025052-24025071 | Msa0764290:intron | 30.0% | |
| ! | TAAAATAGGGTTTTACAGTG+GGG | - | chr5_2:24025131-24025150 | Msa0764290:intron | 30.0% |
| ATAGGTCATTTATTAGGGTT+AGG | - | chr5_2:24025327-24025346 | Msa0764290:intron | 30.0% | |
| TAGGTCATTTATTAGGGTTA+GGG | - | chr5_2:24025328-24025347 | Msa0764290:intron | 30.0% | |
| TTGTTCTTGAACTTATCGTA+GGG | + | chr5_2:24025383-24025402 | None:intergenic | 30.0% | |
| TTTGTTCTTGAACTTATCGT+AGG | + | chr5_2:24025384-24025403 | None:intergenic | 30.0% | |
| AACAAAGAAAGTTGAACTTG+AGG | - | chr5_2:24025398-24025417 | Msa0764290:intron | 30.0% | |
| TAGTTGTCCCAGTAAAATTA+GGG | + | chr5_2:24025464-24025483 | None:intergenic | 30.0% | |
| !!! | TTTTTGTCTTTGGTGTTTCT+TGG | - | chr5_2:24025540-24025559 | Msa0764290:CDS | 30.0% |
| !!! | TTTTGTCTTTGGTGTTTCTT+GGG | - | chr5_2:24025541-24025560 | Msa0764290:CDS | 30.0% |
| !!! | AACAGTTTTGAAAGGGTTGT+TGG | + | chr5_2:24023804-24023823 | None:intergenic | 35.0% |
| !!! | ATGGAGGAACAGTTTTGAAA+GGG | + | chr5_2:24023811-24023830 | None:intergenic | 35.0% |
| !! | TATGAGGGTGTTATTTGGAT+CGG | - | chr5_2:24023892-24023911 | Msa0764290:CDS | 35.0% |
| CACATGGTATCCTGTTTATA+TGG | + | chr5_2:24023932-24023951 | None:intergenic | 35.0% | |
| CATATAAACAGGATACCATG+TGG | - | chr5_2:24023930-24023949 | Msa0764290:CDS | 35.0% | |
| !! | GGACATGTGTTGTTTAAAAG+TGG | - | chr5_2:24023957-24023976 | Msa0764290:CDS | 35.0% |
| !! | TAAATACCGGTGTTGTTTGA+CGG | + | chr5_2:24024135-24024154 | None:intergenic | 35.0% |
| AATATCGAAGTTTCCAATGG+TGG | - | chr5_2:24024216-24024235 | Msa0764290:CDS | 35.0% | |
| ATGTAAGTAACCTGGAAGAA+GGG | + | chr5_2:24024242-24024261 | None:intergenic | 35.0% | |
| AATGTAAGTAACCTGGAAGA+AGG | + | chr5_2:24024243-24024262 | None:intergenic | 35.0% | |
| TCGTTTGAATGATTCATGTG+AGG | + | chr5_2:24024267-24024286 | None:intergenic | 35.0% | |
| !! | TTTGATAGTGATGGGTTGAA+AGG | + | chr5_2:24024297-24024316 | None:intergenic | 35.0% |
| TTAGAAATCAAGTGTGATGG+TGG | + | chr5_2:24024426-24024445 | None:intergenic | 35.0% | |
| TGTTGAGGTTGAAATTCTTC+TGG | + | chr5_2:24024785-24024804 | None:intergenic | 35.0% | |
| AATTTCAACCTCAACATCAC+AGG | - | chr5_2:24024789-24024808 | Msa0764290:intron | 35.0% | |
| TTGCAAACGCGTTTAATCAA+TGG | - | chr5_2:24025025-24025044 | Msa0764290:intron | 35.0% | |
| !! | TGTTGACTTAGAATCTGTTG+CGG | - | chr5_2:24025296-24025315 | Msa0764290:intron | 35.0% |
| GTACATAATAGCCTCTTCAA+TGG | + | chr5_2:24025361-24025380 | None:intergenic | 35.0% | |
| AAAGAAAGTTGAACTTGAGG+AGG | - | chr5_2:24025401-24025420 | Msa0764290:intron | 35.0% | |
| TTGAGGAGGATGATATTCAA+GGG | - | chr5_2:24025415-24025434 | Msa0764290:intron | 35.0% | |
| AAGGGATTCAGATGCTTTAT+GGG | - | chr5_2:24025433-24025452 | Msa0764290:intron | 35.0% | |
| ! | GGTCTAACCCTAATTTTACT+GGG | - | chr5_2:24025454-24025473 | Msa0764290:CDS | 35.0% |
| GTAGTTGTCCCAGTAAAATT+AGG | + | chr5_2:24025465-24025484 | None:intergenic | 35.0% | |
| !! | AGGGATAGAGAATCTAGTTT+TGG | - | chr5_2:24025495-24025514 | Msa0764290:CDS | 35.0% |
| !!! | GATAGAGAATCTAGTTTTGG+TGG | - | chr5_2:24025498-24025517 | Msa0764290:CDS | 35.0% |
| !!! | GGTGTCTTTGTTTTTGTCTT+TGG | - | chr5_2:24025530-24025549 | Msa0764290:CDS | 35.0% |
| !!! | AACAGTTTTGAAAGGGTTGT+TGG | + | chr5_2:24023804-24023823 | None:intergenic | 35.0% |
| !!! | ATGGAGGAACAGTTTTGAAA+GGG | + | chr5_2:24023811-24023830 | None:intergenic | 35.0% |
| !! | TATGAGGGTGTTATTTGGAT+CGG | - | chr5_2:24023892-24023911 | Msa0764290:CDS | 35.0% |
| CACATGGTATCCTGTTTATA+TGG | + | chr5_2:24023932-24023951 | None:intergenic | 35.0% | |
| CATATAAACAGGATACCATG+TGG | - | chr5_2:24023930-24023949 | Msa0764290:CDS | 35.0% | |
| !! | GGACATGTGTTGTTTAAAAG+TGG | - | chr5_2:24023957-24023976 | Msa0764290:CDS | 35.0% |
| !! | TAAATACCGGTGTTGTTTGA+CGG | + | chr5_2:24024135-24024154 | None:intergenic | 35.0% |
| AATATCGAAGTTTCCAATGG+TGG | - | chr5_2:24024216-24024235 | Msa0764290:CDS | 35.0% | |
| ATGTAAGTAACCTGGAAGAA+GGG | + | chr5_2:24024242-24024261 | None:intergenic | 35.0% | |
| AATGTAAGTAACCTGGAAGA+AGG | + | chr5_2:24024243-24024262 | None:intergenic | 35.0% | |
| TCGTTTGAATGATTCATGTG+AGG | + | chr5_2:24024267-24024286 | None:intergenic | 35.0% | |
| !! | TTTGATAGTGATGGGTTGAA+AGG | + | chr5_2:24024297-24024316 | None:intergenic | 35.0% |
| TTAGAAATCAAGTGTGATGG+TGG | + | chr5_2:24024426-24024445 | None:intergenic | 35.0% | |
| TGTTGAGGTTGAAATTCTTC+TGG | + | chr5_2:24024785-24024804 | None:intergenic | 35.0% | |
| AATTTCAACCTCAACATCAC+AGG | - | chr5_2:24024789-24024808 | Msa0764290:intron | 35.0% | |
| TTGCAAACGCGTTTAATCAA+TGG | - | chr5_2:24025025-24025044 | Msa0764290:intron | 35.0% | |
| !! | TGTTGACTTAGAATCTGTTG+CGG | - | chr5_2:24025296-24025315 | Msa0764290:intron | 35.0% |
| GTACATAATAGCCTCTTCAA+TGG | + | chr5_2:24025361-24025380 | None:intergenic | 35.0% | |
| AAAGAAAGTTGAACTTGAGG+AGG | - | chr5_2:24025401-24025420 | Msa0764290:intron | 35.0% | |
| TTGAGGAGGATGATATTCAA+GGG | - | chr5_2:24025415-24025434 | Msa0764290:intron | 35.0% | |
| AAGGGATTCAGATGCTTTAT+GGG | - | chr5_2:24025433-24025452 | Msa0764290:intron | 35.0% | |
| ! | GGTCTAACCCTAATTTTACT+GGG | - | chr5_2:24025454-24025473 | Msa0764290:CDS | 35.0% |
| GTAGTTGTCCCAGTAAAATT+AGG | + | chr5_2:24025465-24025484 | None:intergenic | 35.0% | |
| !! | AGGGATAGAGAATCTAGTTT+TGG | - | chr5_2:24025495-24025514 | Msa0764290:CDS | 35.0% |
| !!! | GATAGAGAATCTAGTTTTGG+TGG | - | chr5_2:24025498-24025517 | Msa0764290:CDS | 35.0% |
| !!! | GGTGTCTTTGTTTTTGTCTT+TGG | - | chr5_2:24025530-24025549 | Msa0764290:CDS | 35.0% |
| !!! | GATGGAGGAACAGTTTTGAA+AGG | + | chr5_2:24023812-24023831 | None:intergenic | 40.0% |
| ATGAAACCAGTGCTCATATG+AGG | - | chr5_2:24023876-24023895 | Msa0764290:CDS | 40.0% | |
| TGAAACCAGTGCTCATATGA+GGG | - | chr5_2:24023877-24023896 | Msa0764290:CDS | 40.0% | |
| !! | GCTCATATGAGGGTGTTATT+TGG | - | chr5_2:24023887-24023906 | Msa0764290:CDS | 40.0% |
| GTGAGGAAATGTAAGTAACC+TGG | + | chr5_2:24024250-24024269 | None:intergenic | 40.0% | |
| GATGGGTACTAAAACTTCAC+CGG | - | chr5_2:24024627-24024646 | Msa0764290:intron | 40.0% | |
| TCATCAGTGAAATTTGACGG+TGG | + | chr5_2:24024732-24024751 | None:intergenic | 40.0% | |
| GAGGTTGAAATTCTTCTGGT+AGG | + | chr5_2:24024781-24024800 | None:intergenic | 40.0% | |
| ! | GTTGAATTTTCCGGAGTTCA+TGG | + | chr5_2:24024892-24024911 | None:intergenic | 40.0% |
| ! | GGAGCTAGAGTTGAATTTTC+CGG | + | chr5_2:24024901-24024920 | None:intergenic | 40.0% |
| ATGAATAGTGTGCAACAGTG+TGG | + | chr5_2:24024932-24024951 | None:intergenic | 40.0% | |
| !! | CTTTTTCACCAACTGATGGA+AGG | - | chr5_2:24025205-24025224 | Msa0764290:intron | 40.0% |
| AAGTGTAACCTTCCATCAGT+TGG | + | chr5_2:24025216-24025235 | None:intergenic | 40.0% | |
| AACTGATGGAAGGTTACACT+TGG | - | chr5_2:24025215-24025234 | Msa0764290:intron | 40.0% | |
| TCTGTTGCGGTTCATGAAAT+AGG | - | chr5_2:24025309-24025328 | Msa0764290:intron | 40.0% | |
| CTTGAGGAGGATGATATTCA+AGG | - | chr5_2:24025414-24025433 | Msa0764290:intron | 40.0% | |
| CAAGGGATTCAGATGCTTTA+TGG | - | chr5_2:24025432-24025451 | Msa0764290:intron | 40.0% | |
| ! | GGGTCTAACCCTAATTTTAC+TGG | - | chr5_2:24025453-24025472 | Msa0764290:CDS | 40.0% |
| !!! | TCTAGTTTTGGTGGAAGACA+TGG | - | chr5_2:24025507-24025526 | Msa0764290:CDS | 40.0% |
| !!! | CTAGTTTTGGTGGAAGACAT+GGG | - | chr5_2:24025508-24025527 | Msa0764290:CDS | 40.0% |
| !!! | TAGTTTTGGTGGAAGACATG+GGG | - | chr5_2:24025509-24025528 | Msa0764290:CDS | 40.0% |
| !! | TCTTTGGTGTTTCTTGGGTT+TGG | - | chr5_2:24025546-24025565 | Msa0764290:CDS | 40.0% |
| !!! | GATGGAGGAACAGTTTTGAA+AGG | + | chr5_2:24023812-24023831 | None:intergenic | 40.0% |
| ATGAAACCAGTGCTCATATG+AGG | - | chr5_2:24023876-24023895 | Msa0764290:CDS | 40.0% | |
| TGAAACCAGTGCTCATATGA+GGG | - | chr5_2:24023877-24023896 | Msa0764290:CDS | 40.0% | |
| !! | GCTCATATGAGGGTGTTATT+TGG | - | chr5_2:24023887-24023906 | Msa0764290:CDS | 40.0% |
| GTGAGGAAATGTAAGTAACC+TGG | + | chr5_2:24024250-24024269 | None:intergenic | 40.0% | |
| GATGGGTACTAAAACTTCAC+CGG | - | chr5_2:24024627-24024646 | Msa0764290:intron | 40.0% | |
| TCATCAGTGAAATTTGACGG+TGG | + | chr5_2:24024732-24024751 | None:intergenic | 40.0% | |
| GAGGTTGAAATTCTTCTGGT+AGG | + | chr5_2:24024781-24024800 | None:intergenic | 40.0% | |
| ! | GTTGAATTTTCCGGAGTTCA+TGG | + | chr5_2:24024892-24024911 | None:intergenic | 40.0% |
| ! | GGAGCTAGAGTTGAATTTTC+CGG | + | chr5_2:24024901-24024920 | None:intergenic | 40.0% |
| ATGAATAGTGTGCAACAGTG+TGG | + | chr5_2:24024932-24024951 | None:intergenic | 40.0% | |
| !! | CTTTTTCACCAACTGATGGA+AGG | - | chr5_2:24025205-24025224 | Msa0764290:intron | 40.0% |
| AAGTGTAACCTTCCATCAGT+TGG | + | chr5_2:24025216-24025235 | None:intergenic | 40.0% | |
| AACTGATGGAAGGTTACACT+TGG | - | chr5_2:24025215-24025234 | Msa0764290:intron | 40.0% | |
| TCTGTTGCGGTTCATGAAAT+AGG | - | chr5_2:24025309-24025328 | Msa0764290:intron | 40.0% | |
| CTTGAGGAGGATGATATTCA+AGG | - | chr5_2:24025414-24025433 | Msa0764290:intron | 40.0% | |
| CAAGGGATTCAGATGCTTTA+TGG | - | chr5_2:24025432-24025451 | Msa0764290:intron | 40.0% | |
| ! | GGGTCTAACCCTAATTTTAC+TGG | - | chr5_2:24025453-24025472 | Msa0764290:CDS | 40.0% |
| !!! | TCTAGTTTTGGTGGAAGACA+TGG | - | chr5_2:24025507-24025526 | Msa0764290:CDS | 40.0% |
| !!! | CTAGTTTTGGTGGAAGACAT+GGG | - | chr5_2:24025508-24025527 | Msa0764290:CDS | 40.0% |
| !!! | TAGTTTTGGTGGAAGACATG+GGG | - | chr5_2:24025509-24025528 | Msa0764290:CDS | 40.0% |
| !! | TCTTTGGTGTTTCTTGGGTT+TGG | - | chr5_2:24025546-24025565 | Msa0764290:CDS | 40.0% |
| ATCAACGGCGCTAGAATCAA+CGG | + | chr5_2:24023619-24023638 | None:intergenic | 45.0% | |
| TGATTCTAGCGCCGTTGATA+AGG | - | chr5_2:24023620-24023639 | Msa0764290:CDS | 45.0% | |
| AGCAGCAGCATCCTTATCAA+CGG | + | chr5_2:24023634-24023653 | None:intergenic | 45.0% | |
| GAAGGAGGATCATCAGTAGT+TGG | + | chr5_2:24023663-24023682 | None:intergenic | 45.0% | |
| CGGAGACTGAAATGTTGTTG+TGG | - | chr5_2:24023718-24023737 | Msa0764290:CDS | 45.0% | |
| TAACACCCTCATATGAGCAC+TGG | + | chr5_2:24023885-24023904 | None:intergenic | 45.0% | |
| AAACAGGATACCATGTGGCA+AGG | - | chr5_2:24023935-24023954 | Msa0764290:CDS | 45.0% | |
| AACAGGATACCATGTGGCAA+GGG | - | chr5_2:24023936-24023955 | Msa0764290:CDS | 45.0% | |
| AAAAAGAGGTCTCCTACGGT+AGG | - | chr5_2:24024077-24024096 | Msa0764290:intron | 45.0% | |
| ! | CTGGCATTGAAGATGGATCA+GGG | + | chr5_2:24024572-24024591 | None:intergenic | 45.0% |
| ATCCATCTTCAATGCCAGCA+TGG | - | chr5_2:24024574-24024593 | Msa0764290:intron | 45.0% | |
| ! | TTCCATGCTGGCATTGAAGA+TGG | + | chr5_2:24024579-24024598 | None:intergenic | 45.0% |
| TTTCACTGATGACTTCGACG+AGG | - | chr5_2:24024740-24024759 | Msa0764290:intron | 45.0% | |
| ! | GAATTTTCCGGAGTTCATGG+AGG | + | chr5_2:24024889-24024908 | None:intergenic | 45.0% |
| TGCAACAGTGTGGAAGTTTG+TGG | + | chr5_2:24024922-24024941 | None:intergenic | 45.0% | |
| GCACACTATTCATTCTTCCC+CGG | - | chr5_2:24024939-24024958 | Msa0764290:intron | 45.0% | |
| AAGCATAGGTTAGGGTTTGC+TGG | + | chr5_2:24024965-24024984 | None:intergenic | 45.0% | |
| ! | GGGATCGAAAGCATAGGTTA+GGG | + | chr5_2:24024973-24024992 | None:intergenic | 45.0% |
| ! | TGGGATCGAAAGCATAGGTT+AGG | + | chr5_2:24024974-24024993 | None:intergenic | 45.0% |
| AAGCGTGTGCTAATGTTCCA+AGG | + | chr5_2:24025188-24025207 | None:intergenic | 45.0% | |
| !!! | CACGCTTTTTCACCAACTGA+TGG | - | chr5_2:24025201-24025220 | Msa0764290:intron | 45.0% |
| ACTTGGACAAAGCAGAAGAC+TGG | - | chr5_2:24025232-24025251 | Msa0764290:intron | 45.0% | |
| CTTGGACAAAGCAGAAGACT+GGG | - | chr5_2:24025233-24025252 | Msa0764290:intron | 45.0% | |
| GGTAGTTAGCGGAGATGTAA+CGG | - | chr5_2:24025254-24025273 | Msa0764290:intron | 45.0% | |
| ! | AGGGCATTCTTCCATTGAAG+AGG | - | chr5_2:24025347-24025366 | Msa0764290:intron | 45.0% |
| ! | GACAACTACTGCTACTTCGA+GGG | - | chr5_2:24025476-24025495 | Msa0764290:CDS | 45.0% |
| ATCAACGGCGCTAGAATCAA+CGG | + | chr5_2:24023619-24023638 | None:intergenic | 45.0% | |
| TGATTCTAGCGCCGTTGATA+AGG | - | chr5_2:24023620-24023639 | Msa0764290:CDS | 45.0% | |
| AGCAGCAGCATCCTTATCAA+CGG | + | chr5_2:24023634-24023653 | None:intergenic | 45.0% | |
| GAAGGAGGATCATCAGTAGT+TGG | + | chr5_2:24023663-24023682 | None:intergenic | 45.0% | |
| CGGAGACTGAAATGTTGTTG+TGG | - | chr5_2:24023718-24023737 | Msa0764290:CDS | 45.0% | |
| TAACACCCTCATATGAGCAC+TGG | + | chr5_2:24023885-24023904 | None:intergenic | 45.0% | |
| AAACAGGATACCATGTGGCA+AGG | - | chr5_2:24023935-24023954 | Msa0764290:CDS | 45.0% | |
| AACAGGATACCATGTGGCAA+GGG | - | chr5_2:24023936-24023955 | Msa0764290:CDS | 45.0% | |
| AAAAAGAGGTCTCCTACGGT+AGG | - | chr5_2:24024077-24024096 | Msa0764290:intron | 45.0% | |
| ! | CTGGCATTGAAGATGGATCA+GGG | + | chr5_2:24024572-24024591 | None:intergenic | 45.0% |
| ATCCATCTTCAATGCCAGCA+TGG | - | chr5_2:24024574-24024593 | Msa0764290:intron | 45.0% | |
| ! | TTCCATGCTGGCATTGAAGA+TGG | + | chr5_2:24024579-24024598 | None:intergenic | 45.0% |
| TTTCACTGATGACTTCGACG+AGG | - | chr5_2:24024740-24024759 | Msa0764290:intron | 45.0% | |
| ! | GAATTTTCCGGAGTTCATGG+AGG | + | chr5_2:24024889-24024908 | None:intergenic | 45.0% |
| TGCAACAGTGTGGAAGTTTG+TGG | + | chr5_2:24024922-24024941 | None:intergenic | 45.0% | |
| GCACACTATTCATTCTTCCC+CGG | - | chr5_2:24024939-24024958 | Msa0764290:intron | 45.0% | |
| AAGCATAGGTTAGGGTTTGC+TGG | + | chr5_2:24024965-24024984 | None:intergenic | 45.0% | |
| ! | GGGATCGAAAGCATAGGTTA+GGG | + | chr5_2:24024973-24024992 | None:intergenic | 45.0% |
| ! | TGGGATCGAAAGCATAGGTT+AGG | + | chr5_2:24024974-24024993 | None:intergenic | 45.0% |
| AAGCGTGTGCTAATGTTCCA+AGG | + | chr5_2:24025188-24025207 | None:intergenic | 45.0% | |
| !!! | CACGCTTTTTCACCAACTGA+TGG | - | chr5_2:24025201-24025220 | Msa0764290:intron | 45.0% |
| ACTTGGACAAAGCAGAAGAC+TGG | - | chr5_2:24025232-24025251 | Msa0764290:intron | 45.0% | |
| CTTGGACAAAGCAGAAGACT+GGG | - | chr5_2:24025233-24025252 | Msa0764290:intron | 45.0% | |
| GGTAGTTAGCGGAGATGTAA+CGG | - | chr5_2:24025254-24025273 | Msa0764290:intron | 45.0% | |
| ! | AGGGCATTCTTCCATTGAAG+AGG | - | chr5_2:24025347-24025366 | Msa0764290:intron | 45.0% |
| ! | GACAACTACTGCTACTTCGA+GGG | - | chr5_2:24025476-24025495 | Msa0764290:CDS | 45.0% |
| TGATAAGGATGCTGCTGCTG+TGG | - | chr5_2:24023635-24023654 | Msa0764290:CDS | 50.0% | |
| TGATGATCCTCCTTCTGCAG+AGG | - | chr5_2:24023668-24023687 | Msa0764290:CDS | 50.0% | |
| ! | AGCTACAGTGTCACTGACGT+GGG | - | chr5_2:24023849-24023868 | Msa0764290:CDS | 50.0% |
| AACACATGTCCCTTGCCACA+TGG | + | chr5_2:24023948-24023967 | None:intergenic | 50.0% | |
| CTTCTTAGGTCTCCTACCGT+AGG | + | chr5_2:24024092-24024111 | None:intergenic | 50.0% | |
| CTACGGTAGGAGACCTAAGA+AGG | - | chr5_2:24024090-24024109 | Msa0764290:intron | 50.0% | |
| TTAGGGTGGGAGACCTTCTT+AGG | + | chr5_2:24024106-24024125 | None:intergenic | 50.0% | |
| AGAAGGTCTCCCACCCTAAA+CGG | - | chr5_2:24024107-24024126 | Msa0764290:intron | 50.0% | |
| TTGTTTGACGGCGCCGTTTA+GGG | + | chr5_2:24024123-24024142 | None:intergenic | 50.0% | |
| ! | GCTGGCATTGAAGATGGATC+AGG | + | chr5_2:24024573-24024592 | None:intergenic | 50.0% |
| ! | AACCGTCGTAAGTTTTGCCG+CGG | + | chr5_2:24024659-24024678 | None:intergenic | 50.0% |
| AAATTTGACGGTGGCGCGTT+GGG | + | chr5_2:24024723-24024742 | None:intergenic | 50.0% | |
| CGAGTTCACCTGTGATGTTG+AGG | + | chr5_2:24024800-24024819 | None:intergenic | 50.0% | |
| TACATCGTCAAGCCACGTTG+CGG | - | chr5_2:24024837-24024856 | Msa0764290:intron | 50.0% | |
| GGTGTGGCTGACATCATCAA+CGG | - | chr5_2:24024858-24024877 | Msa0764290:intron | 50.0% | |
| !! | ATAGGTTAGGGTTTGCTGGC+CGG | + | chr5_2:24024961-24024980 | None:intergenic | 50.0% |
| ! | TTCGCTGGGATCGAAAGCAT+AGG | + | chr5_2:24024979-24024998 | None:intergenic | 50.0% |
| ! | GAAGCATTTGACGGAGTCCT+TGG | - | chr5_2:24025168-24025187 | Msa0764290:intron | 50.0% |
| GCAGAAGACTGGGTAGTTAG+CGG | - | chr5_2:24025243-24025262 | Msa0764290:intron | 50.0% | |
| ! | GGACAACTACTGCTACTTCG+AGG | - | chr5_2:24025475-24025494 | Msa0764290:CDS | 50.0% |
| TGATAAGGATGCTGCTGCTG+TGG | - | chr5_2:24023635-24023654 | Msa0764290:CDS | 50.0% | |
| TGATGATCCTCCTTCTGCAG+AGG | - | chr5_2:24023668-24023687 | Msa0764290:CDS | 50.0% | |
| ! | AGCTACAGTGTCACTGACGT+GGG | - | chr5_2:24023849-24023868 | Msa0764290:CDS | 50.0% |
| AACACATGTCCCTTGCCACA+TGG | + | chr5_2:24023948-24023967 | None:intergenic | 50.0% | |
| CTTCTTAGGTCTCCTACCGT+AGG | + | chr5_2:24024092-24024111 | None:intergenic | 50.0% | |
| CTACGGTAGGAGACCTAAGA+AGG | - | chr5_2:24024090-24024109 | Msa0764290:intron | 50.0% | |
| TTAGGGTGGGAGACCTTCTT+AGG | + | chr5_2:24024106-24024125 | None:intergenic | 50.0% | |
| AGAAGGTCTCCCACCCTAAA+CGG | - | chr5_2:24024107-24024126 | Msa0764290:intron | 50.0% | |
| TTGTTTGACGGCGCCGTTTA+GGG | + | chr5_2:24024123-24024142 | None:intergenic | 50.0% | |
| ! | GCTGGCATTGAAGATGGATC+AGG | + | chr5_2:24024573-24024592 | None:intergenic | 50.0% |
| ! | AACCGTCGTAAGTTTTGCCG+CGG | + | chr5_2:24024659-24024678 | None:intergenic | 50.0% |
| AAATTTGACGGTGGCGCGTT+GGG | + | chr5_2:24024723-24024742 | None:intergenic | 50.0% | |
| CGAGTTCACCTGTGATGTTG+AGG | + | chr5_2:24024800-24024819 | None:intergenic | 50.0% | |
| TACATCGTCAAGCCACGTTG+CGG | - | chr5_2:24024837-24024856 | Msa0764290:intron | 50.0% | |
| GGTGTGGCTGACATCATCAA+CGG | - | chr5_2:24024858-24024877 | Msa0764290:intron | 50.0% | |
| !! | ATAGGTTAGGGTTTGCTGGC+CGG | + | chr5_2:24024961-24024980 | None:intergenic | 50.0% |
| ! | TTCGCTGGGATCGAAAGCAT+AGG | + | chr5_2:24024979-24024998 | None:intergenic | 50.0% |
| ! | GAAGCATTTGACGGAGTCCT+TGG | - | chr5_2:24025168-24025187 | Msa0764290:intron | 50.0% |
| GCAGAAGACTGGGTAGTTAG+CGG | - | chr5_2:24025243-24025262 | Msa0764290:intron | 50.0% | |
| ! | GGACAACTACTGCTACTTCG+AGG | - | chr5_2:24025475-24025494 | Msa0764290:CDS | 50.0% |
| ACGGCGCTAGAATCAACGGT+AGG | + | chr5_2:24023615-24023634 | None:intergenic | 55.0% | |
| TCAGCAGCATCCTCTGCAGA+AGG | + | chr5_2:24023681-24023700 | None:intergenic | 55.0% | |
| TGACTCCGCGAAGATGGAGA+CGG | - | chr5_2:24023698-24023717 | Msa0764290:CDS | 55.0% | |
| AGTCTCCGTCTCCATCTTCG+CGG | + | chr5_2:24023706-24023725 | None:intergenic | 55.0% | |
| ! | GAGCTACAGTGTCACTGACG+TGG | - | chr5_2:24023848-24023867 | Msa0764290:CDS | 55.0% |
| GTTGTTTGACGGCGCCGTTT+AGG | + | chr5_2:24024124-24024143 | None:intergenic | 55.0% | |
| GCGTGGCTAGAATTCCATGC+TGG | + | chr5_2:24024591-24024610 | None:intergenic | 55.0% | |
| AATTCTAGCCACGCACCACC+AGG | - | chr5_2:24024597-24024616 | Msa0764290:intron | 55.0% | |
| AGCCGCGGCAAAACTTACGA+CGG | - | chr5_2:24024654-24024673 | Msa0764290:intron | 55.0% | |
| CGTTGGGGATGTAACCGAAG+TGG | + | chr5_2:24024707-24024726 | None:intergenic | 55.0% | |
| AATTTGACGGTGGCGCGTTG+GGG | + | chr5_2:24024722-24024741 | None:intergenic | 55.0% | |
| GAAATTTGACGGTGGCGCGT+TGG | + | chr5_2:24024724-24024743 | None:intergenic | 55.0% | |
| GGCACAACCTCCATGAACTC+CGG | - | chr5_2:24024879-24024898 | Msa0764290:intron | 55.0% | |
| !! | TAGGTTAGGGTTTGCTGGCC+GGG | + | chr5_2:24024960-24024979 | None:intergenic | 55.0% |
| AACGTTTCGTTGCGTCGTCG+AGG | + | chr5_2:24025004-24025023 | None:intergenic | 55.0% | |
| ! | GGGTTTTACAGTGGGGACCA+TGG | - | chr5_2:24025138-24025157 | Msa0764290:intron | 55.0% |
| CAAATGCTTCTCCGTCGCCA+TGG | + | chr5_2:24025158-24025177 | None:intergenic | 55.0% | |
| !! | GGCGACGGAGAAGCATTTGA+CGG | - | chr5_2:24025159-24025178 | Msa0764290:intron | 55.0% |
| ACGGCGCTAGAATCAACGGT+AGG | + | chr5_2:24023615-24023634 | None:intergenic | 55.0% | |
| TCAGCAGCATCCTCTGCAGA+AGG | + | chr5_2:24023681-24023700 | None:intergenic | 55.0% | |
| TGACTCCGCGAAGATGGAGA+CGG | - | chr5_2:24023698-24023717 | Msa0764290:CDS | 55.0% | |
| AGTCTCCGTCTCCATCTTCG+CGG | + | chr5_2:24023706-24023725 | None:intergenic | 55.0% | |
| ! | GAGCTACAGTGTCACTGACG+TGG | - | chr5_2:24023848-24023867 | Msa0764290:CDS | 55.0% |
| GTTGTTTGACGGCGCCGTTT+AGG | + | chr5_2:24024124-24024143 | None:intergenic | 55.0% | |
| GCGTGGCTAGAATTCCATGC+TGG | + | chr5_2:24024591-24024610 | None:intergenic | 55.0% | |
| AATTCTAGCCACGCACCACC+AGG | - | chr5_2:24024597-24024616 | Msa0764290:intron | 55.0% | |
| AGCCGCGGCAAAACTTACGA+CGG | - | chr5_2:24024654-24024673 | Msa0764290:intron | 55.0% | |
| CGTTGGGGATGTAACCGAAG+TGG | + | chr5_2:24024707-24024726 | None:intergenic | 55.0% | |
| AATTTGACGGTGGCGCGTTG+GGG | + | chr5_2:24024722-24024741 | None:intergenic | 55.0% | |
| GAAATTTGACGGTGGCGCGT+TGG | + | chr5_2:24024724-24024743 | None:intergenic | 55.0% | |
| GGCACAACCTCCATGAACTC+CGG | - | chr5_2:24024879-24024898 | Msa0764290:intron | 55.0% | |
| !! | TAGGTTAGGGTTTGCTGGCC+GGG | + | chr5_2:24024960-24024979 | None:intergenic | 55.0% |
| AACGTTTCGTTGCGTCGTCG+AGG | + | chr5_2:24025004-24025023 | None:intergenic | 55.0% | |
| ! | GGGTTTTACAGTGGGGACCA+TGG | - | chr5_2:24025138-24025157 | Msa0764290:intron | 55.0% |
| CAAATGCTTCTCCGTCGCCA+TGG | + | chr5_2:24025158-24025177 | None:intergenic | 55.0% | |
| !! | GGCGACGGAGAAGCATTTGA+CGG | - | chr5_2:24025159-24025178 | Msa0764290:intron | 55.0% |
| GCAGCATCCTCTGCAGAAGG+AGG | + | chr5_2:24023678-24023697 | None:intergenic | 60.0% | |
| !! | TGCTGCTGACTCCGCGAAGA+TGG | - | chr5_2:24023692-24023711 | Msa0764290:CDS | 60.0% |
| ! | TTGACGGCGCCGTTTAGGGT+GGG | + | chr5_2:24024119-24024138 | None:intergenic | 60.0% |
| TTTGACGGCGCCGTTTAGGG+TGG | + | chr5_2:24024120-24024139 | None:intergenic | 60.0% | |
| ACGGCGCCGTCAAACAACAC+CGG | - | chr5_2:24024126-24024145 | Msa0764290:intron | 60.0% | |
| CCTGGAAGAAGGGCCACCAT+TGG | + | chr5_2:24024232-24024251 | None:intergenic | 60.0% | |
| CCAATGGTGGCCCTTCTTCC+AGG | - | chr5_2:24024229-24024248 | Msa0764290:CDS | 60.0% | |
| TGACTTCGACGAGGCTTCCG+CGG | - | chr5_2:24024749-24024768 | Msa0764290:intron | 60.0% | |
| CTTCTGGTAGGTTCGCACCG+CGG | + | chr5_2:24024769-24024788 | None:intergenic | 60.0% | |
| ATGTCAGCCACACCGCAACG+TGG | + | chr5_2:24024852-24024871 | None:intergenic | 60.0% | |
| !! | AGGTTAGGGTTTGCTGGCCG+GGG | + | chr5_2:24024959-24024978 | None:intergenic | 60.0% |
| ! | GCGTCGTCGAGGTTTTCGCT+GGG | + | chr5_2:24024993-24025012 | None:intergenic | 60.0% |
| ! | TGCGTCGTCGAGGTTTTCGC+TGG | + | chr5_2:24024994-24025013 | None:intergenic | 60.0% |
| TACAGTGGGGACCATGGCGA+CGG | - | chr5_2:24025144-24025163 | Msa0764290:intron | 60.0% | |
| GCAGCATCCTCTGCAGAAGG+AGG | + | chr5_2:24023678-24023697 | None:intergenic | 60.0% | |
| !! | TGCTGCTGACTCCGCGAAGA+TGG | - | chr5_2:24023692-24023711 | Msa0764290:CDS | 60.0% |
| ! | TTGACGGCGCCGTTTAGGGT+GGG | + | chr5_2:24024119-24024138 | None:intergenic | 60.0% |
| TTTGACGGCGCCGTTTAGGG+TGG | + | chr5_2:24024120-24024139 | None:intergenic | 60.0% | |
| ACGGCGCCGTCAAACAACAC+CGG | - | chr5_2:24024126-24024145 | Msa0764290:intron | 60.0% | |
| CCTGGAAGAAGGGCCACCAT+TGG | + | chr5_2:24024232-24024251 | None:intergenic | 60.0% | |
| CCAATGGTGGCCCTTCTTCC+AGG | - | chr5_2:24024229-24024248 | Msa0764290:CDS | 60.0% | |
| TGACTTCGACGAGGCTTCCG+CGG | - | chr5_2:24024749-24024768 | Msa0764290:intron | 60.0% | |
| CTTCTGGTAGGTTCGCACCG+CGG | + | chr5_2:24024769-24024788 | None:intergenic | 60.0% | |
| ATGTCAGCCACACCGCAACG+TGG | + | chr5_2:24024852-24024871 | None:intergenic | 60.0% | |
| !! | AGGTTAGGGTTTGCTGGCCG+GGG | + | chr5_2:24024959-24024978 | None:intergenic | 60.0% |
| ! | GCGTCGTCGAGGTTTTCGCT+GGG | + | chr5_2:24024993-24025012 | None:intergenic | 60.0% |
| ! | TGCGTCGTCGAGGTTTTCGC+TGG | + | chr5_2:24024994-24025013 | None:intergenic | 60.0% |
| TACAGTGGGGACCATGGCGA+CGG | - | chr5_2:24025144-24025163 | Msa0764290:intron | 60.0% | |
| TAGTACCCATCCCACGCGCC+TGG | + | chr5_2:24024618-24024637 | None:intergenic | 65.0% | |
| ! | AACTTCACCGGCTGCAGCCG+CGG | - | chr5_2:24024639-24024658 | Msa0764290:intron | 65.0% |
| ! | AGTTTTGCCGCGGCTGCAGC+CGG | + | chr5_2:24024649-24024668 | None:intergenic | 65.0% |
| CGTCAAGCCACGTTGCGGTG+TGG | - | chr5_2:24024842-24024861 | Msa0764290:intron | 65.0% | |
| TAGTACCCATCCCACGCGCC+TGG | + | chr5_2:24024618-24024637 | None:intergenic | 65.0% | |
| ! | AACTTCACCGGCTGCAGCCG+CGG | - | chr5_2:24024639-24024658 | Msa0764290:intron | 65.0% |
| ! | AGTTTTGCCGCGGCTGCAGC+CGG | + | chr5_2:24024649-24024668 | None:intergenic | 65.0% |
| CGTCAAGCCACGTTGCGGTG+TGG | - | chr5_2:24024842-24024861 | Msa0764290:intron | 65.0% | |
| CACCACCAGGCGCGTGGGAT+GGG | - | chr5_2:24024610-24024629 | Msa0764290:intron | 70.0% | |
| TACCCATCCCACGCGCCTGG+TGG | + | chr5_2:24024615-24024634 | None:intergenic | 70.0% | |
| CACCACCAGGCGCGTGGGAT+GGG | - | chr5_2:24024610-24024629 | Msa0764290:intron | 70.0% | |
| TACCCATCCCACGCGCCTGG+TGG | + | chr5_2:24024615-24024634 | None:intergenic | 70.0% | |
| CCACGCACCACCAGGCGCGT+GGG | - | chr5_2:24024605-24024624 | Msa0764290:intron | 75.0% | |
| GCACCACCAGGCGCGTGGGA+TGG | - | chr5_2:24024609-24024628 | Msa0764290:intron | 75.0% | |
| CCACGCACCACCAGGCGCGT+GGG | - | chr5_2:24024605-24024624 | Msa0764290:intron | 75.0% | |
| GCACCACCAGGCGCGTGGGA+TGG | - | chr5_2:24024609-24024628 | Msa0764290:intron | 75.0% | |
| ! | GCCACGCACCACCAGGCGCG+TGG | - | chr5_2:24024604-24024623 | Msa0764290:intron | 80.0% |
| !! | CCCACGCGCCTGGTGGTGCG+TGG | + | chr5_2:24024608-24024627 | None:intergenic | 80.0% |
| ! | GCCACGCACCACCAGGCGCG+TGG | - | chr5_2:24024604-24024623 | Msa0764290:intron | 80.0% |
| !! | CCCACGCGCCTGGTGGTGCG+TGG | + | chr5_2:24024608-24024627 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 24023588 | 24025584 | 24023588 | ID=Msa0764290;Name=Msa0764290 |
| chr5_2 | mRNA | 24023588 | 24025584 | 24023588 | ID=Msa0764290-mRNA-1;Parent=Msa0764290;Name=Msa0764290-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0|0.66|1|1|3|0|329 |
| chr5_2 | exon | 24025442 | 24025584 | 24025442 | ID=Msa0764290-mRNA-1:exon:9872;Parent=Msa0764290-mRNA-1 |
| chr5_2 | exon | 24024152 | 24024516 | 24024152 | ID=Msa0764290-mRNA-1:exon:9871;Parent=Msa0764290-mRNA-1 |
| chr5_2 | exon | 24023588 | 24024069 | 24023588 | ID=Msa0764290-mRNA-1:exon:9870;Parent=Msa0764290-mRNA-1 |
| chr5_2 | CDS | 24025442 | 24025584 | 24025442 | ID=Msa0764290-mRNA-1:cds;Parent=Msa0764290-mRNA-1 |
| chr5_2 | CDS | 24024152 | 24024516 | 24024152 | ID=Msa0764290-mRNA-1:cds;Parent=Msa0764290-mRNA-1 |
| chr5_2 | CDS | 24023588 | 24024069 | 24023588 | ID=Msa0764290-mRNA-1:cds;Parent=Msa0764290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
